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Fusion gene ID: 5338 |
FusionGeneSummary for CALU_TRIAP1 |
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Fusion gene information | Fusion gene name: CALU_TRIAP1 | Fusion gene ID: 5338 | Hgene | Tgene | Gene symbol | CALU | TRIAP1 | Gene ID | 813 | 51499 |
Gene name | calumenin | TP53 regulated inhibitor of apoptosis 1 | |
Synonyms | - | HSPC132|MDM35|P53CSV|WF-1 | |
Cytomap | 7q32.1 | 12q24.31 | |
Type of gene | protein-coding | protein-coding | |
Description | calumeninIEF SSP 9302crocalbin-like proteinmultiple EF-hand protein | TP53-regulated inhibitor of apoptosis 1mitochondrial distribution and morphology 35 homologp53-inducible cell-survival factorprotein 15E1.1 | |
Modification date | 20180523 | 20180522 | |
UniProtAcc | O43852 | O43715 | |
Ensembl transtripts involved in fusion gene | ENST00000538546, ENST00000535623, ENST00000535011, ENST00000542996, ENST00000249364, ENST00000449187, ENST00000479257, | ENST00000546954, ENST00000302432, | |
Fusion gene scores | * DoF score | 5 X 9 X 2=90 | 1 X 1 X 1=1 |
# samples | 12 | 1 | |
** MAII score | log2(12/90*10)=0.415037499278844 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: CALU [Title/Abstract] AND TRIAP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | TRIAP1 | GO:0015914 | phospholipid transport | 26071602 |
Tgene | TRIAP1 | GO:0030330 | DNA damage response, signal transduction by p53 class mediator | 15735003 |
Tgene | TRIAP1 | GO:0034644 | cellular response to UV | 15735003 |
Tgene | TRIAP1 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 15735003 |
Tgene | TRIAP1 | GO:2001140 | positive regulation of phospholipid transport | 23931759 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | CF135162 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-3UTR | ENST00000538546 | ENST00000546954 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-intron | ENST00000538546 | ENST00000302432 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
3UTR-3UTR | ENST00000535623 | ENST00000546954 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
3UTR-intron | ENST00000535623 | ENST00000302432 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
intron-3UTR | ENST00000535011 | ENST00000546954 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
intron-intron | ENST00000535011 | ENST00000302432 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-3UTR | ENST00000542996 | ENST00000546954 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-intron | ENST00000542996 | ENST00000302432 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-3UTR | ENST00000249364 | ENST00000546954 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-intron | ENST00000249364 | ENST00000302432 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-3UTR | ENST00000449187 | ENST00000546954 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-intron | ENST00000449187 | ENST00000302432 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-3UTR | ENST00000479257 | ENST00000546954 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
5CDS-intron | ENST00000479257 | ENST00000302432 | CALU | chr7 | 128407569 | - | TRIAP1 | chr12 | 120881856 | - |
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FusionProtFeatures for CALU_TRIAP1 |
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Hgene | Tgene |
CALU | TRIAP1 |
Involved in the modulation of the mitochondrialapoptotic pathway by ensuring the accumulation of cardiolipin (CL)in mitochondrial membranes. In vitro, the TRIAP1:PRELID1 complexmediates the transfer of phosphatidic acid (PA) between liposomesand probably functions as a PA transporter across themitochondrion intermembrane space to provide PA for CL synthesisin the inner membrane (PubMed:23931759). Likewise, theTRIAP1:PRELID3A complex mediates the transfer of phosphatidic acid(PA) between liposomes (in vitro) and probably functions as a PAtransporter across the mitochondrion intermembrane space (in vivo)(PubMed:26071602). Mediates cell survival by inhibiting activationof caspase-9 which prevents induction of apoptosis(PubMed:15735003). {ECO:0000269|PubMed:15735003,ECO:0000269|PubMed:23931759}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for CALU_TRIAP1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for CALU_TRIAP1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CALU_TRIAP1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CALU_TRIAP1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CALU | C0027626 | Neoplasm Invasiveness | 1 | CTD_human |