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Fusion gene ID: 4457 |
FusionGeneSummary for BRPF3_N4BP2L2 |
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Fusion gene information | Fusion gene name: BRPF3_N4BP2L2 | Fusion gene ID: 4457 | Hgene | Tgene | Gene symbol | BRPF3 | N4BP2L2 | Gene ID | 27154 | 10443 |
Gene name | bromodomain and PHD finger containing 3 | NEDD4 binding protein 2 like 2 | |
Synonyms | - | 92M18.3|CG005|CG016|PFAAP5 | |
Cytomap | 6p21.31 | 13q13.1 | |
Type of gene | protein-coding | protein-coding | |
Description | bromodomain and PHD finger-containing protein 3 | NEDD4-binding protein 2-like 2phosphonoformate immuno-associated protein 5protein from BRCA2 region | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q9ULD4 | Q92802 | |
Ensembl transtripts involved in fusion gene | ENST00000357641, ENST00000339717, ENST00000534694, ENST00000543502, ENST00000443324, ENST00000534400, | ENST00000380121, ENST00000504114, ENST00000357505, ENST00000399396, ENST00000446957, ENST00000267068, | |
Fusion gene scores | * DoF score | 4 X 4 X 4=64 | 5 X 6 X 1=30 |
# samples | 4 | 18 | |
** MAII score | log2(4/64*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(18/30*10)=2.58496250072116 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: BRPF3 [Title/Abstract] AND N4BP2L2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | BRPF3 | GO:0043966 | histone H3 acetylation | 16387653 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BE930492 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000357641 | ENST00000380121 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000357641 | ENST00000504114 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000357641 | ENST00000357505 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000357641 | ENST00000399396 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000357641 | ENST00000446957 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000357641 | ENST00000267068 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
Frame-shift | ENST00000339717 | ENST00000380121 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000339717 | ENST00000504114 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000339717 | ENST00000357505 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000339717 | ENST00000399396 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000339717 | ENST00000446957 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000339717 | ENST00000267068 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
Frame-shift | ENST00000534694 | ENST00000380121 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534694 | ENST00000504114 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534694 | ENST00000357505 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534694 | ENST00000399396 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534694 | ENST00000446957 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534694 | ENST00000267068 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
Frame-shift | ENST00000543502 | ENST00000380121 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000543502 | ENST00000504114 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000543502 | ENST00000357505 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000543502 | ENST00000399396 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000543502 | ENST00000446957 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000543502 | ENST00000267068 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
Frame-shift | ENST00000443324 | ENST00000380121 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000443324 | ENST00000504114 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000443324 | ENST00000357505 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000443324 | ENST00000399396 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000443324 | ENST00000446957 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000443324 | ENST00000267068 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
Frame-shift | ENST00000534400 | ENST00000380121 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534400 | ENST00000504114 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534400 | ENST00000357505 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534400 | ENST00000399396 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534400 | ENST00000446957 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
5CDS-intron | ENST00000534400 | ENST00000267068 | BRPF3 | chr6 | 36168351 | - | N4BP2L2 | chr13 | 33054769 | - |
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FusionProtFeatures for BRPF3_N4BP2L2 |
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Hgene | Tgene |
BRPF3 | N4BP2L2 |
Component of the MOZ/MORF complex which has a histone H3acetyltransferase activity. {ECO:0000269|PubMed:16387653}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for BRPF3_N4BP2L2 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for BRPF3_N4BP2L2 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for BRPF3_N4BP2L2 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for BRPF3_N4BP2L2 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | N4BP2L2 | C0037274 | Dermatologic disorders | 1 | CTD_human |
Tgene | N4BP2L2 | C0311375 | Arsenic Poisoning | 1 | CTD_human |