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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 4422

FusionGeneSummary for BRD9_STARD3

check button Fusion gene summary
Fusion gene informationFusion gene name: BRD9_STARD3
Fusion gene ID: 4422
HgeneTgene
Gene symbol

BRD9

STARD3

Gene ID

65980

10948

Gene namebromodomain containing 9StAR related lipid transfer domain containing 3
SynonymsLAVS3040|PRO9856CAB1|MLN64|es64
Cytomap

5p15.33

17q12

Type of geneprotein-codingprotein-coding
Descriptionbromodomain-containing protein 9rhabdomyosarcoma antigen MU-RMS-40.8sarcoma antigen NY-SAR-29stAR-related lipid transfer protein 3MLN 64START domain-containing protein 3StAR-related lipid transfer (START) domain containing 3metastatic lymph node gene 64 proteinmetastatic lymph node protein 64steroidogenic acute regulatory protein related
Modification date2018051920180522
UniProtAcc

Q9H8M2

Q14849

Ensembl transtripts involved in fusion geneENST00000388890, ENST00000323510, 
ENST00000483173, ENST00000467963, 
ENST00000435709, ENST00000494422, 
ENST00000336308, ENST00000578232, 
ENST00000544210, ENST00000394250, 
ENST00000580611, 
Fusion gene scores* DoF score8 X 9 X 6=43210 X 3 X 7=210
# samples 1010
** MAII scorelog2(10/432*10)=-2.11103131238874
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(10/210*10)=-1.0703893278914
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: BRD9 [Title/Abstract] AND STARD3 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneSTARD3

GO:0030301

cholesterol transport

28377464

TgeneSTARD3

GO:0099044

vesicle tethering to endoplasmic reticulum

24105263|28377464


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVESCATCGA-R6-A8W5-01BBRD9chr5

876216

-STARD3chr17

37813261

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000388890ENST00000336308BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000388890ENST00000578232BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000388890ENST00000544210BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000388890ENST00000394250BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-intronENST00000388890ENST00000580611BRD9chr5

876216

-STARD3chr17

37813261

+
In-frameENST00000323510ENST00000336308BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000323510ENST00000578232BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000323510ENST00000544210BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000323510ENST00000394250BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-intronENST00000323510ENST00000580611BRD9chr5

876216

-STARD3chr17

37813261

+
In-frameENST00000483173ENST00000336308BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000483173ENST00000578232BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000483173ENST00000544210BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000483173ENST00000394250BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-intronENST00000483173ENST00000580611BRD9chr5

876216

-STARD3chr17

37813261

+
In-frameENST00000467963ENST00000336308BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000467963ENST00000578232BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000467963ENST00000544210BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-3UTRENST00000467963ENST00000394250BRD9chr5

876216

-STARD3chr17

37813261

+
5CDS-intronENST00000467963ENST00000580611BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3CDSENST00000435709ENST00000336308BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3UTRENST00000435709ENST00000578232BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3UTRENST00000435709ENST00000544210BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3UTRENST00000435709ENST00000394250BRD9chr5

876216

-STARD3chr17

37813261

+
intron-intronENST00000435709ENST00000580611BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3CDSENST00000494422ENST00000336308BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3UTRENST00000494422ENST00000578232BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3UTRENST00000494422ENST00000544210BRD9chr5

876216

-STARD3chr17

37813261

+
intron-3UTRENST00000494422ENST00000394250BRD9chr5

876216

-STARD3chr17

37813261

+
intron-intronENST00000494422ENST00000580611BRD9chr5

876216

-STARD3chr17

37813261

+

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FusionProtFeatures for BRD9_STARD3


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
BRD9

Q9H8M2

STARD3

Q14849

Sterol-binding protein that mediates cholesteroltransport from the endoplasmic reticulum to endosomes(PubMed:11053434, PubMed:15930133, PubMed:22514632,PubMed:28377464). Creates contact site between the endoplasmicreticulum and late endosomes: localizes to late endosome membranesand contacts the endoplasmic reticulum via interaction with VAPAand VAPB (PubMed:24105263, PubMed:28377464). Acts as a lipidtransfer protein that redirects sterol to the endosome at theexpense of the cell membrane and favors membrane formation insideendosomes (PubMed:28377464). May also mediate cholesteroltransport between other membranes, such as mitochondria membraneor cell membrane (PubMed:12070139, PubMed:19965586). However, suchresults need additional experimental evidences; probably mainlymediates cholesterol transport from the endoplasmic reticulum toendosomes (PubMed:28377464). Does not activate transcriptionalcholesterol sensing (PubMed:28377464). Able to bind other lipids,such as lutein, a xanthophyll carotenoids that form the macularpigment of the retina (PubMed:21322544).{ECO:0000269|PubMed:11053434, ECO:0000269|PubMed:12070139,ECO:0000269|PubMed:15930133, ECO:0000269|PubMed:19965586,ECO:0000269|PubMed:21322544, ECO:0000269|PubMed:22514632,ECO:0000269|PubMed:24105263, ECO:0000269|PubMed:28377464}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneBRD9chr5:876216chr17:37813261ENST00000323510-91364_95365502Compositional biasNote=Lys-rich
HgeneBRD9chr5:876216chr17:37813261ENST00000388890-91364_95345482Compositional biasNote=Lys-rich
HgeneBRD9chr5:876216chr17:37813261ENST00000467963-121664_95461598Compositional biasNote=Lys-rich
HgeneBRD9chr5:876216chr17:37813261ENST00000483173-121664_95408545Compositional biasNote=Lys-rich
HgeneBRD9chr5:876216chr17:37813261ENST00000323510-913153_223365502DomainBromo
HgeneBRD9chr5:876216chr17:37813261ENST00000388890-913153_223345482DomainBromo
HgeneBRD9chr5:876216chr17:37813261ENST00000467963-1216153_223461598DomainBromo
HgeneBRD9chr5:876216chr17:37813261ENST00000483173-1216153_223408545DomainBromo
HgeneBRD9chr5:876216chr17:37813261ENST00000323510-913214_216365502RegionHistone H4K5ac H4K8ac and histone H4K5bu H4K8bu
HgeneBRD9chr5:876216chr17:37813261ENST00000388890-913214_216345482RegionHistone H4K5ac H4K8ac and histone H4K5bu H4K8bu
HgeneBRD9chr5:876216chr17:37813261ENST00000467963-1216214_216461598RegionHistone H4K5ac H4K8ac and histone H4K5bu H4K8bu
HgeneBRD9chr5:876216chr17:37813261ENST00000483173-1216214_216408545RegionHistone H4K5ac H4K8ac and histone H4K5bu H4K8bu
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+115230_44373446DomainSTART
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+114230_44373428DomainSTART
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+115230_44373446DomainSTART
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+115207_21273446MotifFFAT
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+114207_21273428MotifFFAT
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+115207_21273446MotifFFAT
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+115116_12073446Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+115142_14873446Topological domainExtracellular
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+115170_44573446Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+11573_9473446Topological domainExtracellular
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+114116_12073428Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+114142_14873428Topological domainExtracellular
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+114170_44573428Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+11473_9473428Topological domainExtracellular
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+115116_12073446Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+115142_14873446Topological domainExtracellular
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+115170_44573446Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+11573_9473446Topological domainExtracellular
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+115121_14173446TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+115149_16973446TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+11595_11573446TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+114121_14173428TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+114149_16973428TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+11495_11573428TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+115121_14173446TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+115149_16973446TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+11595_11573446TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+11546_21773446DomainMENTAL
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+11446_21773428DomainMENTAL
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+11546_21773446DomainMENTAL
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+1151_5173446Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+1141_5173428Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+1151_5173446Topological domainCytoplasmic
TgeneSTARD3chr5:876216chr17:37813261ENST00000336308+11552_7273446TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000394250+11452_7273428TransmembraneHelical
TgeneSTARD3chr5:876216chr17:37813261ENST00000544210+11552_7273446TransmembraneHelical


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FusionGeneSequence for BRD9_STARD3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_BRD9_ENST00000388890_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_718aa
MKGYQSLVFNFFFLKLSAENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFK
LMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAE
EHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSA
TTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQTNTGIRKNLEQEIIQ
YNFKTSFFDIFVLAFFRFSGLLLGYAVLRLRHWWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEA
EEERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAGSDNESDEEVAGKKSFSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYG
DTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRD

>In-frame_BRD9_ENST00000323510_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_738aa
MKGYQSLVFNFFFLKLSAENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFK
LMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREV
ISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHPVDLSSLSSKLLPG
FTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTL
FQLKQTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVLRLRHWWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVS
FVLAWLETWFLDFKVLPQEAEEERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAGSDNESDEEVAGKKSFSAQEREYIRQGKEATAV
VDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAA
GGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMF

>In-frame_BRD9_ENST00000483173_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_781aa
MMTGQTMSERGTKKRKRRRRRSPRRRSIWTMRKEGSERKRRSGSERGSTVTRRERLTTLILGRRWRWSRPQIGQSERAGHSQPKMRAHLF
SNSWNTSSASFRDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAG
FKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKM
GYLKRNGDGSLLYSVVNTAEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAY
GDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAV
LRLRHWWVIAVTTLVSSAFLIVKVILSELLSKGAFGYLLPIVSFVLAWLETWFLDFKVLPQEAEEERWYLAAQVAVARGPLLFSGALSEG
QFYSPPESFAGSDNESDEEVAGKKSFSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAEL
VYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGP

>In-frame_BRD9_ENST00000467963_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_834aa
MGKKHKKHKAEWRSSYEDYADKPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHKEKKKKKKKKSEKEKHLDDEERRKRKE
EKKRKREREHCDTEGEADDFDPGKKVEVEPPPDRPVRACRTQPAENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHP
MDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAKKSK
KPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHPVDLSSLS
SKLLPGFTTLGFKDERRNKVTFLSSATTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQITGG
DHSRTLFQLKQTNTGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGLLLGYAVLRLRHWWVIAVTTLVSSAFLIVKVILSELLSKGAFGY
LLPIVSFVLAWLETWFLDFKVLPQEAEEERWYLAAQVAVARGPLLFSGALSEGQFYSPPESFAGSDNESDEEVAGKKSFSAQEREYIRQG
KEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYD
VSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQS


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_BRD9_ENST00000388890_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_2154nt
ATGAAGGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAA
CACTTCCTCCGCCAGCTTCAGAGAAAAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATA
ATAAAACATCCCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAG
CTGATGTGTGATAATGCAATGACATACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATG
ATGAGCAAACAGGCAGCTCTTTTGGGCAATGAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCC
AAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAG
GAGCACGTGCTGGCGCTGGTGGAGCACGCAGCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTG
AAGAGGAACGGGGACGGGAGCCTGCTCTACAGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTG
AGCTCGCTCTCCAGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCC
ACTACTGCGCTTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAG
ACAGGCGTGCAGTGTGCGCTGAGCCTGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAG
ATCACAGGCGGAGACCACTCTAGGACGCTCTTCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAG
TACAACTTTAAAACTTCCTTCTTCGACATCTTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCGGCTC
CGGCACTGGTGGGTGATTGCGGTCACGACGCTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGG
GCATTTGGCTACCTGCTCCCCATCGTCTCTTTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCT
GAAGAGGAGCGATGGTATCTTGCCGCCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTAT
TCACCCCCAGAATCCTTTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTAC
ATCCGCCAGGGGAAGGAGGCCACGGCAGTGGTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGG
GACACCGTGTACACCATTGAAGTTCCCTTTCACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAG
GAGGTGATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTC
ATCTCCTATGACGTGTCTGCAGGGGCTGCGGGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGAC
CGATACTTGTCATCAGGGATCGCCACCTCACACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTC
ATCGTGCTCAAGTCGGCCAGTAACCCCCGTGTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTC

>In-frame_BRD9_ENST00000323510_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_2214nt
ATGAAGGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAA
CACTTCCTCCGCCAGCTTCAGAGAAAAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATA
ATAAAACATCCCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAG
CTGATGTGTGATAATGCAATGACATACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATG
ATGAGCAAAGAGCGGCTGTTAGCTTTGAAGCGCAGCATGTCGTTTATGCAGGACATGGATTTTTCTCAGCAGGCAGCTCTTTTGGGCAAT
GAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTT
ATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCA
GCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTGAAGAGGAACGGGGACGGGAGCCTGCTCTAC
AGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCCCAGGC
TTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTTTCGATGCAGAATAATTCA
GTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAGTGTGCGCTGAGCCTGCAG
GAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAGATCACAGGCGGAGACCACTCTAGGACGCTC
TTCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAGTACAACTTTAAAACTTCCTTCTTCGACATC
TTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTGATTGCGGTCACGACG
CTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGGGCATTTGGCTACCTGCTCCCCATCGTCTCT
TTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCTGAAGAGGAGCGATGGTATCTTGCCGCCCAG
GTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTATTCACCCCCAGAATCCTTTGCAGGGTCTGAC
AATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTACATCCGCCAGGGGAAGGAGGCCACGGCAGTG
GTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGGGACACCGTGTACACCATTGAAGTTCCCTTT
CACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTG
CTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTCATCTCCTATGACGTGTCTGCAGGGGCTGCG
GGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGACCGATACTTGTCATCAGGGATCGCCACCTCA
CACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCAAGTCGGCCAGTAACCCCCGT
GTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTCATCCACCAGAGCCTCGCGGCCACCATGTTT

>In-frame_BRD9_ENST00000483173_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_2343nt
ATGATGACAGGTCAGACCATGAGCGAGAGAGGCACAAAGAAAAGAAAAAGAAGAAGAAGAAGAAGTCCGAGAAGGAGAAGCATCTGGACG
ATGAGGAAAGAAGGAAGCGAAAGGAAGAGAAGAAGCGGAAGCGAGAGAGGGAGCACTGTGACACGGAGGGAGAGGCTGACGACTTTGATC
CTGGGAAGAAGGTGGAGGTGGAGCCGCCCCCAGATCGGCCAGTCCGAGCGTGCCGGACACAGCCAGCCGAAAATGAGAGCACACCTATTC
AGCAACTCCTGGAACACTTCCTCCGCCAGCTTCAGAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATAT
TCAATGATAATAAAACATCCCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCA
GATTTCAAGCTGATGTGTGATAATGCAATGACATACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGC
TTTAAGATGATGAGCAAACAGGCAGCTCTTTTGGGCAATGAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTA
GAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGT
ACCGCAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCAGCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATG
GGCTATCTGAAGAGGAACGGGGACGGGAGCCTGCTCTACAGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCG
GTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTC
TCCAGTGCCACTACTGCGCTTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTAC
GGAGATGAGACAGGCGTGCAGTGTGCGCTGAGCCTGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTC
CTGGACCAGATCACAGGCGGAGACCACTCTAGGACGCTCTTCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAG
ATCATCCAGTACAACTTTAAAACTTCCTTCTTCGACATCTTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTG
CTGCGGCTCCGGCACTGGTGGGTGATTGCGGTCACGACGCTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTC
AGCAAAGGGGCATTTGGCTACCTGCTCCCCATCGTCTCTTTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCC
CAGGAAGCTGAAGAGGAGCGATGGTATCTTGCCGCCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGA
CAGTTCTATTCACCCCCAGAATCCTTTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAG
CGGGAGTACATCCGCCAGGGGAAGGAGGCCACGGCAGTGGTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAAT
GAATATGGGGACACCGTGTACACCATTGAAGTTCCCTTTCACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTC
GTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGAC
AACACCCTCATCTCCTATGACGTGTCTGCAGGGGCTGCGGGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGG
CGCAGGGACCGATACTTGTCATCAGGGATCGCCACCTCACACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCT
GGGGGCTTCATCGTGCTCAAGTCGGCCAGTAACCCCCGTGTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCC
CGGTACCTCATCCACCAGAGCCTCGCGGCCACCATGTTTGAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAGCTGGGGGCCCGGGCG

>In-frame_BRD9_ENST00000467963_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_2502nt
ATGGGCAAGAAGCACAAGAAGCACAAGGCCGAGTGGCGCTCGTCCTACGAGGATTATGCCGACAAGCCCCTGGAGAAGCCTCTAAAGCTA
GTCCTGAAGGTCGGAGGAAGTGAAGTGACTGAACTCTCAGGATCCGGCCACGACTCCAGTTACTATGATGACAGGTCAGACCATGAGCGA
GAGAGGCACAAAGAAAAGAAAAAGAAGAAGAAGAAGAAGTCCGAGAAGGAGAAGCATCTGGACGATGAGGAAAGAAGGAAGCGAAAGGAA
GAGAAGAAGCGGAAGCGAGAGAGGGAGCACTGTGACACGGAGGGAGAGGCTGACGACTTTGATCCTGGGAAGAAGGTGGAGGTGGAGCCG
CCCCCAGATCGGCCAGTCCGAGCGTGCCGGACACAGCCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAACACTTCCTCCGC
CAGCTTCAGAGAAAAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATAATAAAACATCCC
ATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAGCTGATGTGTGAT
AATGCAATGACATACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATGATGAGCAAACAG
GCAGCTCTTTTGGGCAATGAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAA
AAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAGGAGCACGTGCTG
GCGCTGGTGGAGCACGCAGCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTGAAGAGGAACGGG
GACGGGAGCCTGCTCTACAGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCC
AGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTT
TCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAG
TGTGCGCTGAGCCTGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAGATCACAGGCGGA
GACCACTCTAGGACGCTCTTCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAGTACAACTTTAAA
ACTTCCTTCTTCGACATCTTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGG
GTGATTGCGGTCACGACGCTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGGGCATTTGGCTAC
CTGCTCCCCATCGTCTCTTTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCTGAAGAGGAGCGA
TGGTATCTTGCCGCCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTATTCACCCCCAGAA
TCCTTTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTACATCCGCCAGGGG
AAGGAGGCCACGGCAGTGGTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGGGACACCGTGTAC
ACCATTGAAGTTCCCTTTCACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTG
CAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTCATCTCCTATGAC
GTGTCTGCAGGGGCTGCGGGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGACCGATACTTGTCA
TCAGGGATCGCCACCTCACACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCAAG
TCGGCCAGTAACCCCCGTGTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTCATCCACCAGAGC


* Fusion transcript sequences (Full-length transcript).
>In-frame_BRD9_ENST00000388890_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_2730nt
ATGAAGGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAA
CACTTCCTCCGCCAGCTTCAGAGAAAAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATA
ATAAAACATCCCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAG
CTGATGTGTGATAATGCAATGACATACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATG
ATGAGCAAACAGGCAGCTCTTTTGGGCAATGAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCC
AAGAAATCCAAAAAGCCGAGTAGAGAAGTTATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAG
GAGCACGTGCTGGCGCTGGTGGAGCACGCAGCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTG
AAGAGGAACGGGGACGGGAGCCTGCTCTACAGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTG
AGCTCGCTCTCCAGTAAGCTACTCCCAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCC
ACTACTGCGCTTTCGATGCAGAATAATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAG
ACAGGCGTGCAGTGTGCGCTGAGCCTGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAG
ATCACAGGCGGAGACCACTCTAGGACGCTCTTCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAG
TACAACTTTAAAACTTCCTTCTTCGACATCTTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCGGCTC
CGGCACTGGTGGGTGATTGCGGTCACGACGCTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGG
GCATTTGGCTACCTGCTCCCCATCGTCTCTTTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCT
GAAGAGGAGCGATGGTATCTTGCCGCCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTAT
TCACCCCCAGAATCCTTTGCAGGGTCTGACAATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTAC
ATCCGCCAGGGGAAGGAGGCCACGGCAGTGGTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGG
GACACCGTGTACACCATTGAAGTTCCCTTTCACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAG
GAGGTGATCCTGCAGCCCGAGAGGATGGTGCTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTC
ATCTCCTATGACGTGTCTGCAGGGGCTGCGGGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGAC
CGATACTTGTCATCAGGGATCGCCACCTCACACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTC
ATCGTGCTCAAGTCGGCCAGTAACCCCCGTGTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTC
ATCCACCAGAGCCTCGCGGCCACCATGTTTGAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAGCTGGGGGCCCGGGCGTGACTGTGC
CCCCTCCCACCCTGCGGGCCAGGGTCCTGTCGCCACCACTTCCAGAGCCAGAAAGGGTGCCAGTTGGGCTCGCACTGCCCACATGGGACC
TGGCCCCAGGCTGTCACCCTCCACCGAGCCACGCAGTGCCTGGAGTTGACTGACTGAGCAGGCTGTGGGGTGGAGCACTGGACTCCGGGG
CCCCACTGGCTGGAGGAAGTGGGGTCTGGCCTGTTGATGTTTACATGGCGCCCTGCCTCCTGGAGGACCAGATTGCTCTGCCCCACCTTG
CCAGGGCAGGGTCTGGGCTGGGCACCTGACTTGGCTGGGGAGGACCAGGGCCCTGGGCAGGGCAGGGCAGCCTGTCACCCGTGTGAAGAT
GAAGGGGCTCTTCATCTGCCTGCGCTCTCGTCGGTTTTTTTAGGATTATTGAAAGAGTCTGGGACCCTTGTTGGGGAGTGGGTGGCAGGT
GGGGGTGGGCTGCTGGCCATGAATCTCTGCCTCTCCCAGGCTGTCCCCCTCCTCCCAGGGCCTCCTGGGGGACCTTTGTATTAAGCCAAT

>In-frame_BRD9_ENST00000323510_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_2790nt
ATGAAGGGATACCAAAGTCTTGTATTCAATTTTTTTTTCCTTAAATTGTCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAA
CACTTCCTCCGCCAGCTTCAGAGAAAAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATA
ATAAAACATCCCATGGATTTTGGCACCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAG
CTGATGTGTGATAATGCAATGACATACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATG
ATGAGCAAAGAGCGGCTGTTAGCTTTGAAGCGCAGCATGTCGTTTATGCAGGACATGGATTTTTCTCAGCAGGCAGCTCTTTTGGGCAAT
GAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTT
ATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCA
GCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTGAAGAGGAACGGGGACGGGAGCCTGCTCTAC
AGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCCCAGGC
TTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTTTCGATGCAGAATAATTCA
GTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAGTGTGCGCTGAGCCTGCAG
GAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAGATCACAGGCGGAGACCACTCTAGGACGCTC
TTCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAGTACAACTTTAAAACTTCCTTCTTCGACATC
TTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTGATTGCGGTCACGACG
CTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGGGCATTTGGCTACCTGCTCCCCATCGTCTCT
TTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCTGAAGAGGAGCGATGGTATCTTGCCGCCCAG
GTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTATTCACCCCCAGAATCCTTTGCAGGGTCTGAC
AATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTACATCCGCCAGGGGAAGGAGGCCACGGCAGTG
GTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGGGACACCGTGTACACCATTGAAGTTCCCTTT
CACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTG
CTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTCATCTCCTATGACGTGTCTGCAGGGGCTGCG
GGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGACCGATACTTGTCATCAGGGATCGCCACCTCA
CACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCAAGTCGGCCAGTAACCCCCGT
GTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTCATCCACCAGAGCCTCGCGGCCACCATGTTT
GAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAGCTGGGGGCCCGGGCGTGACTGTGCCCCCTCCCACCCTGCGGGCCAGGGTCCTGT
CGCCACCACTTCCAGAGCCAGAAAGGGTGCCAGTTGGGCTCGCACTGCCCACATGGGACCTGGCCCCAGGCTGTCACCCTCCACCGAGCC
ACGCAGTGCCTGGAGTTGACTGACTGAGCAGGCTGTGGGGTGGAGCACTGGACTCCGGGGCCCCACTGGCTGGAGGAAGTGGGGTCTGGC
CTGTTGATGTTTACATGGCGCCCTGCCTCCTGGAGGACCAGATTGCTCTGCCCCACCTTGCCAGGGCAGGGTCTGGGCTGGGCACCTGAC
TTGGCTGGGGAGGACCAGGGCCCTGGGCAGGGCAGGGCAGCCTGTCACCCGTGTGAAGATGAAGGGGCTCTTCATCTGCCTGCGCTCTCG
TCGGTTTTTTTAGGATTATTGAAAGAGTCTGGGACCCTTGTTGGGGAGTGGGTGGCAGGTGGGGGTGGGCTGCTGGCCATGAATCTCTGC
CTCTCCCAGGCTGTCCCCCTCCTCCCAGGGCCTCCTGGGGGACCTTTGTATTAAGCCAATTAAAAACATGAATTTAAAAAAAAAAAAAAA

>In-frame_BRD9_ENST00000483173_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_3059nt
TCCGGGCACGCGGACGGGGGTCCTGGGCACCGGGCGAGATTATGCCGACAAGCCCCTGGAGAAGCCTCTAAAGCTAGTCCTGAAGGTCGG
AGGAAGTGAAGTGACTGAACTCTCAGGATCCGGCCACGACTCCAGTTACTATGATGACAGGTCAGACCATGAGCGAGAGAGGCACAAAGA
AAAGAAAAAGAAGAAGAAGAAGAAGTCCGAGAAGGAGAAGCATCTGGACGATGAGGAAAGAAGGAAGCGAAAGGAAGAGAAGAAGCGGAA
GCGAGAGAGGGAGCACTGTGACACGGAGGGAGAGGCTGACGACTTTGATCCTGGGAAGAAGGTGGAGGTGGAGCCGCCCCCAGATCGGCC
AGTCCGAGCGTGCCGGACACAGCCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAACACTTCCTCCGCCAGCTTCAGAGATC
CCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATAATAAAACATCCCATGGATTTTGGCACCATGA
AAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAGCTGATGTGTGATAATGCAATGACATACAATA
GGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATGATGAGCAAACAGGCAGCTCTTTTGGGCAATG
AAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAGAAGTTA
TCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAGGAGCACGTGCTGGCGCTGGTGGAGCACGCAG
CTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTGAAGAGGAACGGGGACGGGAGCCTGCTCTACA
GCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCCCAGGCT
TCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTTTCGATGCAGAATAATTCAG
TATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAGTGTGCGCTGAGCCTGCAGG
AGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAGATCACAGGCGGAGACCACTCTAGGACGCTCT
TCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAGTACAACTTTAAAACTTCCTTCTTCGACATCT
TTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTGATTGCGGTCACGACGC
TGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGGGCATTTGGCTACCTGCTCCCCATCGTCTCTT
TTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCTGAAGAGGAGCGATGGTATCTTGCCGCCCAGG
TTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTATTCACCCCCAGAATCCTTTGCAGGGTCTGACA
ATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTACATCCGCCAGGGGAAGGAGGCCACGGCAGTGG
TGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGGGACACCGTGTACACCATTGAAGTTCCCTTTC
ACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGATGGTGC
TGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTCATCTCCTATGACGTGTCTGCAGGGGCTGCGG
GCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGACCGATACTTGTCATCAGGGATCGCCACCTCAC
ACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCAAGTCGGCCAGTAACCCCCGTG
TTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTCATCCACCAGAGCCTCGCGGCCACCATGTTTG
AATTTGCCTTTCACCTGCGACAGCGCATCAGCGAGCTGGGGGCCCGGGCGTGACTGTGCCCCCTCCCACCCTGCGGGCCAGGGTCCTGTC
GCCACCACTTCCAGAGCCAGAAAGGGTGCCAGTTGGGCTCGCACTGCCCACATGGGACCTGGCCCCAGGCTGTCACCCTCCACCGAGCCA
CGCAGTGCCTGGAGTTGACTGACTGAGCAGGCTGTGGGGTGGAGCACTGGACTCCGGGGCCCCACTGGCTGGAGGAAGTGGGGTCTGGCC
TGTTGATGTTTACATGGCGCCCTGCCTCCTGGAGGACCAGATTGCTCTGCCCCACCTTGCCAGGGCAGGGTCTGGGCTGGGCACCTGACT
TGGCTGGGGAGGACCAGGGCCCTGGGCAGGGCAGGGCAGCCTGTCACCCGTGTGAAGATGAAGGGGCTCTTCATCTGCCTGCGCTCTCGT
CGGTTTTTTTAGGATTATTGAAAGAGTCTGGGACCCTTGTTGGGGAGTGGGTGGCAGGTGGGGGTGGGCTGCTGGCCATGAATCTCTGCC

>In-frame_BRD9_ENST00000467963_chr5_876216_-_STARD3_ENST00000336308_chr17_37813261_+_3245nt
CTGCCGCGGCCCCGCCTCGCCCCGTTTCCGGCGCGGCCCAGCGAGCTCGGCAACCTCGGCGCAGCGAGCGCGGGCGGCCAGCCAGGGCCA
GGGGGCGGTGGCGGCCAAGGTCCGACCGGGTGCCAGCTGTTCCCAGCCCCCGCCTCGGGCCCGCCGCCGGCGCCGCCATGGGCAAGAAGC
ACAAGAAGCACAAGGCCGAGTGGCGCTCGTCCTACGAGGATTATGCCGACAAGCCCCTGGAGAAGCCTCTAAAGCTAGTCCTGAAGGTCG
GAGGAAGTGAAGTGACTGAACTCTCAGGATCCGGCCACGACTCCAGTTACTATGATGACAGGTCAGACCATGAGCGAGAGAGGCACAAAG
AAAAGAAAAAGAAGAAGAAGAAGAAGTCCGAGAAGGAGAAGCATCTGGACGATGAGGAAAGAAGGAAGCGAAAGGAAGAGAAGAAGCGGA
AGCGAGAGAGGGAGCACTGTGACACGGAGGGAGAGGCTGACGACTTTGATCCTGGGAAGAAGGTGGAGGTGGAGCCGCCCCCAGATCGGC
CAGTCCGAGCGTGCCGGACACAGCCAGCCGAAAATGAGAGCACACCTATTCAGCAACTCCTGGAACACTTCCTCCGCCAGCTTCAGAGAA
AAGATCCCCATGGATTTTTTGCTTTTCCTGTCACGGATGCAATTGCTCCTGGATATTCAATGATAATAAAACATCCCATGGATTTTGGCA
CCATGAAAGACAAAATTGTAGCTAATGAATACAAGTCAGTTACGGAATTTAAGGCAGATTTCAAGCTGATGTGTGATAATGCAATGACAT
ACAATAGGCCAGATACCGTGTACTACAAGTTGGCGAAGAAGATCCTTCACGCAGGCTTTAAGATGATGAGCAAACAGGCAGCTCTTTTGG
GCAATGAAGATACAGCTGTTGAGGAACCTGTCCCTGAAGTTGTACCAGTACAAGTAGAAACTGCCAAGAAATCCAAAAAGCCGAGTAGAG
AAGTTATCAGCTGCATGTTTGAGCCTGAAGGGAATGCCTGCAGCTTGACGGACAGTACCGCAGAGGAGCACGTGCTGGCGCTGGTGGAGC
ACGCAGCTGACGAAGCTCGGGACAGGATCAACCGGTTCCTCCCAGGCGGCAAGATGGGCTATCTGAAGAGGAACGGGGACGGGAGCCTGC
TCTACAGCGTGGTCAACACGGCCGAGCCGGACGCTGATGAGGAGGAGACCCACCCGGTGGACTTGAGCTCGCTCTCCAGTAAGCTACTCC
CAGGCTTCACCACGCTGGGCTTCAAAGACGAGAGAAGAAACAAAGTCACCTTTCTCTCCAGTGCCACTACTGCGCTTTCGATGCAGAATA
ATTCAGTATTTGGCGACTTGAAGTCGGACGAGATGGAGCTGCTCTACTCAGCCTACGGAGATGAGACAGGCGTGCAGTGTGCGCTGAGCC
TGCAGGAGTTTGTGAAGGATGCTGGGAGCTACAGCAAGAAAGTGGTGGACGACCTCCTGGACCAGATCACAGGCGGAGACCACTCTAGGA
CGCTCTTCCAGCTGAAGCAGACCAACACAGGCATCCGTAAGAACTTGGAGCAGGAGATCATCCAGTACAACTTTAAAACTTCCTTCTTCG
ACATCTTTGTCCTGGCCTTCTTCCGCTTCTCTGGACTGCTCCTAGGCTATGCCGTGCTGCGGCTCCGGCACTGGTGGGTGATTGCGGTCA
CGACGCTGGTGTCCAGTGCATTCCTCATTGTCAAGGTCATCCTCTCTGAGCTGCTCAGCAAAGGGGCATTTGGCTACCTGCTCCCCATCG
TCTCTTTTGTCCTCGCCTGGTTGGAGACCTGGTTCCTTGACTTCAAAGTCCTACCCCAGGAAGCTGAAGAGGAGCGATGGTATCTTGCCG
CCCAGGTTGCTGTTGCCCGTGGACCCCTGCTGTTCTCCGGTGCTCTGTCCGAGGGACAGTTCTATTCACCCCCAGAATCCTTTGCAGGGT
CTGACAATGAATCAGATGAAGAAGTTGCTGGGAAGAAAAGTTTCTCTGCTCAGGAGCGGGAGTACATCCGCCAGGGGAAGGAGGCCACGG
CAGTGGTGGACCAGATCTTGGCCCAGGAAGAGAACTGGAAGTTTGAGAAGAATAATGAATATGGGGACACCGTGTACACCATTGAAGTTC
CCTTTCACGGCAAGACGTTTATCCTGAAGACCTTCCTGCCCTGTCCTGCGGAGCTCGTGTACCAGGAGGTGATCCTGCAGCCCGAGAGGA
TGGTGCTGTGGAACAAGACAGTGACTGCCTGCCAGATCCTGCAGCGAGTGGAAGACAACACCCTCATCTCCTATGACGTGTCTGCAGGGG
CTGCGGGCGGCGTGGTCTCCCCAAGGGACTTCGTGAATGTCCGGCGCATTGAGCGGCGCAGGGACCGATACTTGTCATCAGGGATCGCCA
CCTCACACAGTGCCAAGCCCCCGACGCACAAATATGTCCGGGGAGAGAATGGCCCTGGGGGCTTCATCGTGCTCAAGTCGGCCAGTAACC
CCCGTGTTTGCACCTTTGTCTGGATTCTTAATACAGATCTCAAGGGCCGCCTGCCCCGGTACCTCATCCACCAGAGCCTCGCGGCCACCA
TGTTTGAATTTGCCTTTCACCTGCGACAGCGCATCAGCGAGCTGGGGGCCCGGGCGTGACTGTGCCCCCTCCCACCCTGCGGGCCAGGGT
CCTGTCGCCACCACTTCCAGAGCCAGAAAGGGTGCCAGTTGGGCTCGCACTGCCCACATGGGACCTGGCCCCAGGCTGTCACCCTCCACC
GAGCCACGCAGTGCCTGGAGTTGACTGACTGAGCAGGCTGTGGGGTGGAGCACTGGACTCCGGGGCCCCACTGGCTGGAGGAAGTGGGGT
CTGGCCTGTTGATGTTTACATGGCGCCCTGCCTCCTGGAGGACCAGATTGCTCTGCCCCACCTTGCCAGGGCAGGGTCTGGGCTGGGCAC
CTGACTTGGCTGGGGAGGACCAGGGCCCTGGGCAGGGCAGGGCAGCCTGTCACCCGTGTGAAGATGAAGGGGCTCTTCATCTGCCTGCGC
TCTCGTCGGTTTTTTTAGGATTATTGAAAGAGTCTGGGACCCTTGTTGGGGAGTGGGTGGCAGGTGGGGGTGGGCTGCTGGCCATGAATC
TCTGCCTCTCCCAGGCTGTCCCCCTCCTCCCAGGGCCTCCTGGGGGACCTTTGTATTAAGCCAATTAAAAACATGAATTTAAAAAAAAAA


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FusionGenePPI for BRD9_STARD3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
BRD9BRD4, WHSC1L1, CATIP, SS18, SMARCD1, MUS81, NFE2L1, CXXC4, BCL7C, BCL7A, SMARCC2, TRIM25, UBE2ASTARD3GOPC, SPACA1, SDF4, ERGIC3, HEPACAM2, VAPB, CREB3, C19orf26, MME, P2RX2, SLC15A1, CHRM3, MANSC1, PMEL, CLEC2D, TSPYL6, TRIM25, LMNA


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for BRD9_STARD3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for BRD9_STARD3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneBRD9C0036920Sezary Syndrome1CTD_human
TgeneSTARD3C0033578Prostatic Neoplasms2CTD_human
TgeneSTARD3C3496069cocaine use1PSYGENET