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Fusion gene ID: 43891 |
FusionGeneSummary for ZZZ3_CXCL11 |
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Fusion gene information | Fusion gene name: ZZZ3_CXCL11 | Fusion gene ID: 43891 | Hgene | Tgene | Gene symbol | ZZZ3 | CXCL11 | Gene ID | 26009 | 6373 |
Gene name | zinc finger ZZ-type containing 3 | C-X-C motif chemokine ligand 11 | |
Synonyms | ATAC1 | H174|I-TAC|IP-9|IP9|SCYB11|SCYB9B|b-R1 | |
Cytomap | 1p31.1 | 4q21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | ZZ-type zinc finger-containing protein 3ATAC component 1 homologzinc finger, ZZ domain containing 3 | C-X-C motif chemokine 11beta-R1chemokine (C-X-C motif) ligand 11interferon gamma-inducible protein 9interferon-inducible T-cell alpha chemoattractantsmall inducible cytokine B11small inducible cytokine subfamily B (Cys-X-Cys), member 11small induci | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q8IYH5 | O14625 | |
Ensembl transtripts involved in fusion gene | ENST00000370801, ENST00000370798, ENST00000476275, | ENST00000306621, ENST00000503860, | |
Fusion gene scores | * DoF score | 6 X 5 X 3=90 | 4 X 1 X 4=16 |
# samples | 6 | 4 | |
** MAII score | log2(6/90*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/16*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ZZZ3 [Title/Abstract] AND CXCL11 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | CXCL11 | GO:0006935 | chemotaxis | 12782716 |
Tgene | CXCL11 | GO:0030816 | positive regulation of cAMP metabolic process | 12782716 |
Tgene | CXCL11 | GO:0043950 | positive regulation of cAMP-mediated signaling | 12782716 |
Tgene | CXCL11 | GO:0051281 | positive regulation of release of sequestered calcium ion into cytosol | 12782716 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | PRAD | TCGA-VP-A87K-01A | ZZZ3 | chr1 | 78148947 | - | CXCL11 | chr4 | 76957217 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-5UTR | ENST00000370801 | ENST00000306621 | ZZZ3 | chr1 | 78148947 | - | CXCL11 | chr4 | 76957217 | - |
intron-5UTR | ENST00000370801 | ENST00000503860 | ZZZ3 | chr1 | 78148947 | - | CXCL11 | chr4 | 76957217 | - |
5UTR-5UTR | ENST00000370798 | ENST00000306621 | ZZZ3 | chr1 | 78148947 | - | CXCL11 | chr4 | 76957217 | - |
5UTR-5UTR | ENST00000370798 | ENST00000503860 | ZZZ3 | chr1 | 78148947 | - | CXCL11 | chr4 | 76957217 | - |
intron-5UTR | ENST00000476275 | ENST00000306621 | ZZZ3 | chr1 | 78148947 | - | CXCL11 | chr4 | 76957217 | - |
intron-5UTR | ENST00000476275 | ENST00000503860 | ZZZ3 | chr1 | 78148947 | - | CXCL11 | chr4 | 76957217 | - |
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FusionProtFeatures for ZZZ3_CXCL11 |
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Hgene | Tgene |
ZZZ3 | CXCL11 |
Component of the ATAC complex, a complex with histoneacetyltransferase activity on histones H3 and H4.{ECO:0000269|PubMed:19103755}. | Chemotactic for interleukin-activated T-cells but notunstimulated T-cells, neutrophils or monocytes. Induces calciumrelease in activated T-cells. Binds to CXCR3. May play animportant role in CNS diseases which involve T-cell recruitment.May play a role in skin immune responses. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZZZ3_CXCL11 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZZZ3_CXCL11 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZZZ3 | GATA1, ZNF212, LZTR1, IKBKG, BLZF1, TRIM22, MAML3, PBXIP1, PCBD2, ZNF496, ZNF513, ZBTB9, TADA2A, DNAJB11, TFAP4, YEATS2, EPS8, HECW2, FAM124A, BRCA1, CCDC101, PSME3, RFPL4B, WDR5, MBIP, CARD8, PSMC3, TADA3, KAT2A, EGFR, IKZF5, CDH19, SPERT, LMO2, PFDN4, MAGEA10, BCAT1, CCBL1, NCAPH2 | CXCL11 | CXCR3, MTUS2, SMARCB1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZZZ3_CXCL11 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZZZ3_CXCL11 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | CXCL11 | C0282488 | Interstitial Cystitis | 1 | CTD_human |