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Fusion gene ID: 43817 |
FusionGeneSummary for ZNRF3_DCAF11 |
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Fusion gene information | Fusion gene name: ZNRF3_DCAF11 | Fusion gene ID: 43817 | Hgene | Tgene | Gene symbol | ZNRF3 | DCAF11 | Gene ID | 84133 | 80344 |
Gene name | zinc and ring finger 3 | DDB1 and CUL4 associated factor 11 | |
Synonyms | BK747E2.3|RNF203 | GL014|PRO2389|WDR23 | |
Cytomap | 22q12.1 | 14q12 | |
Type of gene | protein-coding | protein-coding | |
Description | E3 ubiquitin-protein ligase ZNRF3CTA-292E10.6RING finger protein 203RING-type E3 ubiquitin transferase ZNRF3novel C3HC4 type Zinc finger (ring finger)zinc/RING finger protein 3 | DDB1- and CUL4-associated factor 11WD repeat domain 23WD repeat-containing protein 23 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9ULT6 | Q8TEB1 | |
Ensembl transtripts involved in fusion gene | ENST00000544604, ENST00000332811, ENST00000402174, ENST00000406323, | ENST00000559115, ENST00000446197, ENST00000560171, ENST00000396941, ENST00000396936, | |
Fusion gene scores | * DoF score | 14 X 4 X 12=672 | 1 X 1 X 1=1 |
# samples | 17 | 1 | |
** MAII score | log2(17/672*10)=-1.98292648664106 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: ZNRF3 [Title/Abstract] AND DCAF11 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ZNRF3 | GO:0016567 | protein ubiquitination | 22575959 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | PRAD | TCGA-V1-A8WS-01A | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000544604 | ENST00000559115 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
Frame-shift | ENST00000544604 | ENST00000446197 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5CDS-intron | ENST00000544604 | ENST00000560171 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5CDS-intron | ENST00000544604 | ENST00000396941 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5CDS-intron | ENST00000544604 | ENST00000396936 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5UTR-3CDS | ENST00000332811 | ENST00000559115 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5UTR-3CDS | ENST00000332811 | ENST00000446197 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5UTR-intron | ENST00000332811 | ENST00000560171 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5UTR-intron | ENST00000332811 | ENST00000396941 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
5UTR-intron | ENST00000332811 | ENST00000396936 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-3CDS | ENST00000402174 | ENST00000559115 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-3CDS | ENST00000402174 | ENST00000446197 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-intron | ENST00000402174 | ENST00000560171 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-intron | ENST00000402174 | ENST00000396941 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-intron | ENST00000402174 | ENST00000396936 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-3CDS | ENST00000406323 | ENST00000559115 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-3CDS | ENST00000406323 | ENST00000446197 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-intron | ENST00000406323 | ENST00000560171 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-intron | ENST00000406323 | ENST00000396941 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
intron-intron | ENST00000406323 | ENST00000396936 | ZNRF3 | chr22 | 29280054 | + | DCAF11 | chr14 | 24586475 | + |
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FusionProtFeatures for ZNRF3_DCAF11 |
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Hgene | Tgene |
ZNRF3 | DCAF11 |
E3 ubiquitin-protein ligase that acts as a negativeregulator of the Wnt signaling pathway by mediating theubiquitination and subsequent degradation of Wnt receptor complexcomponents Frizzled and LRP6. Acts on both canonical and non-canonical Wnt signaling pathway. Acts as a tumor suppressor in theintestinal stem cell zone by inhibiting the Wnt signaling pathway,thereby resticting the size of the intestinal stem cell zone.{ECO:0000269|PubMed:22575959}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZNRF3_DCAF11 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZNRF3_DCAF11 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZNRF3 | UBE2N, FZD4, RSPO1, LGR4, LRP6, GFI1B, DVL2, HSPB1, RSPO2, RSPO3, LGR5, FZD7 | DCAF11 | COPS5, COPS6, PARP11, DDB1, CUL4A, DDA1, CUL5, NEDD8, RFWD2, COPS3, COPS4, COPS7A, COPS2, ASPSCR1, DCAF8, LRBA, VCP, CUL4B, PNKD, CDRT15, TENC1, PTEN, SLBP, EYA2, COPS8, PPP2R5E, DBT, CCT2, TCP1, GNPAT, CCT4, CCT3, PLK1, CCT7, CCT6A, COPS7B, MICU2, CCT5, CCT6B, GPS1, MICU1, NFE2L2, SIRT7 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNRF3_DCAF11 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNRF3_DCAF11 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ZNRF3 | C0030297 | Pancreatic Neoplasm | 2 | CTD_human |
Hgene | ZNRF3 | C0206686 | Adrenocortical carcinoma | 1 | CTD_human |