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Fusion gene ID: 43672 |
FusionGeneSummary for ZNF738_KIF1B |
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Fusion gene information | Fusion gene name: ZNF738_KIF1B | Fusion gene ID: 43672 | Hgene | Tgene | Gene symbol | ZNF738 | KIF1B | Gene ID | 148203 | 23095 |
Gene name | zinc finger protein 738 | kinesin family member 1B | |
Synonyms | - | CMT2|CMT2A|CMT2A1|HMSNII|KLP|NBLST1 | |
Cytomap | 19p12 | 1p36.22 | |
Type of gene | protein-coding | protein-coding | |
Description | protein ZNF738 | kinesin-like protein KIF1Bkinesin superfamily protein KIF1B | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | Q8NE65 | O60333 | |
Ensembl transtripts involved in fusion gene | ENST00000311015, ENST00000380870, ENST00000597810, ENST00000594245, | ENST00000377093, ENST00000263934, ENST00000377086, ENST00000377083, ENST00000377081, ENST00000465635, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 7 X 7 X 6=294 |
# samples | 2 | 8 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(8/294*10)=-1.877744249949 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ZNF738 [Title/Abstract] AND KIF1B [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | DA666479 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000311015 | ENST00000377093 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000311015 | ENST00000263934 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000311015 | ENST00000377086 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000311015 | ENST00000377083 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000311015 | ENST00000377081 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-intron | ENST00000311015 | ENST00000465635 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000380870 | ENST00000377093 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000380870 | ENST00000263934 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000380870 | ENST00000377086 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000380870 | ENST00000377083 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000380870 | ENST00000377081 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-intron | ENST00000380870 | ENST00000465635 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000597810 | ENST00000377093 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000597810 | ENST00000263934 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000597810 | ENST00000377086 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000597810 | ENST00000377083 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-5UTR | ENST00000597810 | ENST00000377081 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
5CDS-intron | ENST00000597810 | ENST00000465635 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
intron-5UTR | ENST00000594245 | ENST00000377093 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
intron-5UTR | ENST00000594245 | ENST00000263934 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
intron-5UTR | ENST00000594245 | ENST00000377086 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
intron-5UTR | ENST00000594245 | ENST00000377083 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
intron-5UTR | ENST00000594245 | ENST00000377081 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
intron-intron | ENST00000594245 | ENST00000465635 | ZNF738 | chr19 | 21558767 | + | KIF1B | chr1 | 10292306 | + |
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FusionProtFeatures for ZNF738_KIF1B |
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Hgene | Tgene |
ZNF738 | KIF1B |
May be involved in transcriptional regulation. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZNF738_KIF1B |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZNF738_KIF1B |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZNF738 | TRIM28 | KIF1B | BRCA1, STARD13, EEF1A1, GIPC1, YWHAG, CALM1, ELAVL1, KIAA0368, YWHAE, APP, PIK3C3, YWHAB, C18orf25, SEC24A, SIAH1, TRAK2, PSMC3, NINL, CSNK2A2, MAGEA1, UBE2I, YWHAH, RBM7, PARD6A, THOC2, SMC6, VPS26B, ZSCAN26, KIF1A, BIN2, CETN1, KIAA1279, VPS33B, VIPAS39, GOPC, PLOD1, PDF, PPP4R1, CAV3, TULP2, EIF4A1, KCTD3, KIF13B, ZBTB21, KSR1, GIGYF1, LRFN1, CGN, DENND1A, SH3PXD2A, SRGAP2, RTKN, MAST3, EIF4E2, CBY1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNF738_KIF1B |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF738_KIF1B |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | KIF1B | C0026769 | Multiple Sclerosis | 1 | CTD_human |
Tgene | KIF1B | C1861678 | Charcot-Marie-Tooth Disease, Axonal, Type 2a1 | 1 | CTD_human;ORPHANET;UNIPROT |