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Fusion gene ID: 43430 |
FusionGeneSummary for ZNF557_ZNF714 |
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Fusion gene information | Fusion gene name: ZNF557_ZNF714 | Fusion gene ID: 43430 | Hgene | Tgene | Gene symbol | ZNF557 | ZNF714 | Gene ID | 79230 | 148206 |
Gene name | zinc finger protein 557 | zinc finger protein 714 | |
Synonyms | - | - | |
Cytomap | 19p13.2 | 19p12 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein 557CTB-25J19.9 | zinc finger protein 714 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q8N988 | Q96N38 | |
Ensembl transtripts involved in fusion gene | ENST00000252840, ENST00000414706, ENST00000439035, | ENST00000596053, ENST00000596143, ENST00000601416, ENST00000291770, ENST00000600535, | |
Fusion gene scores | * DoF score | 4 X 3 X 3=36 | 1 X 1 X 1=1 |
# samples | 3 | 1 | |
** MAII score | log2(3/36*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: ZNF557 [Title/Abstract] AND ZNF714 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LUSC | TCGA-60-2706-01A | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000252840 | ENST00000596053 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000252840 | ENST00000596143 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000252840 | ENST00000601416 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000252840 | ENST00000291770 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-intron | ENST00000252840 | ENST00000600535 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000414706 | ENST00000596053 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000414706 | ENST00000596143 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000414706 | ENST00000601416 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000414706 | ENST00000291770 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-intron | ENST00000414706 | ENST00000600535 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000439035 | ENST00000596053 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000439035 | ENST00000596143 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000439035 | ENST00000601416 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-5UTR | ENST00000439035 | ENST00000291770 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
5CDS-intron | ENST00000439035 | ENST00000600535 | ZNF557 | chr19 | 7076517 | + | ZNF714 | chr19 | 21266783 | + |
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FusionProtFeatures for ZNF557_ZNF714 |
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Hgene | Tgene |
ZNF557 | ZNF714 |
May be involved in transcriptional regulation. | May be involved in transcriptional regulation. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZNF557_ZNF714 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZNF557_ZNF714 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZNF557 | SMAD9, PRMT6, SMYD3, SUV39H1, SUV39H2, WHSC1L1, CRK, STAT3, MTUS2, CEP70 | ZNF714 | PCBD1, LZTR1, ELAVL1, ZNF550, ZNF223 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNF557_ZNF714 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF557_ZNF714 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |