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Fusion gene ID: 43328 |
FusionGeneSummary for ZNF43_EFHB |
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Fusion gene information | Fusion gene name: ZNF43_EFHB | Fusion gene ID: 43328 | Hgene | Tgene | Gene symbol | ZNF43 | EFHB | Gene ID | 7594 | 151651 |
Gene name | zinc finger protein 43 | EF-hand domain family member B | |
Synonyms | HTF6|KOX27|ZNF39L1 | CFAP21 | |
Cytomap | 19p12 | 3p24.3 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein 43zinc finger protein 39-like 1 (KOX 27)zinc finger protein HTF6zinc finger protein KOX27 | EF-hand domain-containing family member Bcilia and flagella associated protein 21 | |
Modification date | 20180403 | 20180403 | |
UniProtAcc | P17038 | Q8N7U6 | |
Ensembl transtripts involved in fusion gene | ENST00000594012, ENST00000595461, ENST00000598381, ENST00000598288, ENST00000354959, ENST00000599414, | ENST00000295824, ENST00000344838, ENST00000498089, | |
Fusion gene scores | * DoF score | 2 X 3 X 2=12 | 1 X 2 X 1=2 |
# samples | 2 | 1 | |
** MAII score | log2(2/12*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(1/2*10)=2.32192809488736 | |
Context | PubMed: ZNF43 [Title/Abstract] AND EFHB [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | PRAD | TCGA-EJ-5508-01A | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
TCGA | LD | PRAD | TCGA-EJ-5508-01A | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000594012 | ENST00000295824 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-5UTR | ENST00000594012 | ENST00000344838 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000594012 | ENST00000498089 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000595461 | ENST00000295824 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-5UTR | ENST00000595461 | ENST00000344838 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000595461 | ENST00000498089 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000598381 | ENST00000295824 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-5UTR | ENST00000598381 | ENST00000344838 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000598381 | ENST00000498089 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000598288 | ENST00000295824 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-5UTR | ENST00000598288 | ENST00000344838 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000598288 | ENST00000498089 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
5CDS-intron | ENST00000354959 | ENST00000295824 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
5CDS-5UTR | ENST00000354959 | ENST00000344838 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
5CDS-intron | ENST00000354959 | ENST00000498089 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000599414 | ENST00000295824 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-5UTR | ENST00000599414 | ENST00000344838 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
intron-intron | ENST00000599414 | ENST00000498089 | ZNF43 | chr19 | 22018838 | - | EFHB | chr3 | 19977826 | - |
5UTR-3CDS | ENST00000594012 | ENST00000295824 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
5UTR-3CDS | ENST00000594012 | ENST00000344838 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
5UTR-5UTR | ENST00000594012 | ENST00000498089 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
5UTR-3CDS | ENST00000595461 | ENST00000295824 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
5UTR-3CDS | ENST00000595461 | ENST00000344838 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
5UTR-5UTR | ENST00000595461 | ENST00000498089 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000598381 | ENST00000295824 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000598381 | ENST00000344838 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-5UTR | ENST00000598381 | ENST00000498089 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000598288 | ENST00000295824 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000598288 | ENST00000344838 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-5UTR | ENST00000598288 | ENST00000498089 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000354959 | ENST00000295824 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000354959 | ENST00000344838 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-5UTR | ENST00000354959 | ENST00000498089 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000599414 | ENST00000295824 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-3CDS | ENST00000599414 | ENST00000344838 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
intron-5UTR | ENST00000599414 | ENST00000498089 | ZNF43 | chr19 | 22033740 | - | EFHB | chr3 | 19962059 | - |
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FusionProtFeatures for ZNF43_EFHB |
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Hgene | Tgene |
ZNF43 | EFHB |
May be involved in transcriptional regulation. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZNF43_EFHB |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZNF43_EFHB |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZNF43 | EFHB |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNF43_EFHB |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF43_EFHB |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |