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Fusion gene ID: 43302 |
FusionGeneSummary for ZNF423_CCAR1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ZNF423_CCAR1 | Fusion gene ID: 43302 | Hgene | Tgene | Gene symbol | ZNF423 | CCAR1 | Gene ID | 23090 | 55749 |
Gene name | zinc finger protein 423 | cell division cycle and apoptosis regulator 1 | |
Synonyms | Ebfaz|JBTS19|NPHP14|OAZ|Roaz|ZFP423|Zfp104|hOAZ | - | |
Cytomap | 16q12.1 | 10q21.3 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein 423OLF-1/EBF associated zinc fingerSmad- and Olf-interacting zinc finger proteinearly B-cell factor associated zinc finger proteinolf1/EBF-associated zinc finger protein | cell division cycle and apoptosis regulator protein 1cell cycle and apoptosis regulatory protein 1death inducer with SAP domain | |
Modification date | 20180523 | 20180522 | |
UniProtAcc | Q2M1K9 | Q8IX12 | |
Ensembl transtripts involved in fusion gene | ENST00000561648, ENST00000563137, ENST00000562871, ENST00000262383, ENST00000535559, ENST00000567169, ENST00000562520, | ENST00000535016, ENST00000265872, ENST00000543719, ENST00000483264, | |
Fusion gene scores | * DoF score | 5 X 4 X 3=60 | 3 X 3 X 2=18 |
# samples | 4 | 4 | |
** MAII score | log2(4/60*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/18*10)=1.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ZNF423 [Title/Abstract] AND CCAR1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ZNF423 | GO:0045892 | negative regulation of transcription, DNA-templated | 10660046 |
Hgene | ZNF423 | GO:0045893 | positive regulation of transcription, DNA-templated | 10660046 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | UCS | TCGA-N8-A4PQ-01A | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000561648 | ENST00000535016 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
In-frame | ENST00000561648 | ENST00000265872 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
In-frame | ENST00000561648 | ENST00000543719 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
5CDS-intron | ENST00000561648 | ENST00000483264 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000563137 | ENST00000535016 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000563137 | ENST00000265872 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000563137 | ENST00000543719 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
5CDS-intron | ENST00000563137 | ENST00000483264 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000562871 | ENST00000535016 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000562871 | ENST00000265872 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000562871 | ENST00000543719 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
5CDS-intron | ENST00000562871 | ENST00000483264 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000262383 | ENST00000535016 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000262383 | ENST00000265872 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000262383 | ENST00000543719 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
5CDS-intron | ENST00000262383 | ENST00000483264 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-3CDS | ENST00000535559 | ENST00000535016 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-3CDS | ENST00000535559 | ENST00000265872 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-3CDS | ENST00000535559 | ENST00000543719 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-intron | ENST00000535559 | ENST00000483264 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-3CDS | ENST00000567169 | ENST00000535016 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-3CDS | ENST00000567169 | ENST00000265872 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-3CDS | ENST00000567169 | ENST00000543719 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
intron-intron | ENST00000567169 | ENST00000483264 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000562520 | ENST00000535016 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000562520 | ENST00000265872 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
Frame-shift | ENST00000562520 | ENST00000543719 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
5CDS-intron | ENST00000562520 | ENST00000483264 | ZNF423 | chr16 | 49764682 | - | CCAR1 | chr10 | 70545893 | + |
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FusionProtFeatures for ZNF423_CCAR1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ZNF423 | CCAR1 |
Transcription factor that can both act as an activatoror a repressor depending on the context. Plays a central role inBMP signaling and olfactory neurogenesis. Associates with SMADs inresponse to BMP2 leading to activate transcription of BMP targetgenes. Acts as a transcriptional repressor via its interactionwith EBF1, a transcription factor involved in terminal olfactoryreceptor neurons differentiation; this interaction preventing EBF1to bind DNA and activate olfactory-specific genes. Involved inolfactory neurogenesis by participating in a developmental switchthat regulates the transition from differentiation to maturationin olfactory receptor neurons. Controls proliferation anddifferentiation of neural precursors in cerebellar vermisformation. {ECO:0000269|PubMed:10660046}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 67_93 | 92 | 1285 | Zinc finger | C2H2-type 1%3B degenerate |
Hgene | ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 67_93 | 92 | 1285 | Zinc finger | C2H2-type 1%3B degenerate |
Tgene | >CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 1033_1114 | 883 | 1151 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 1033_1114 | 868 | 1136 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 1033_1114 | 868 | 1136 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 1020_1042 | 92 | 1285 | Zinc finger | C2H2-type 24 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 1064_1082 | 92 | 1285 | Zinc finger | C2H2-type 25%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 1120_1143 | 92 | 1285 | Zinc finger | C2H2-type 26 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 1168_1190 | 92 | 1285 | Zinc finger | C2H2-type 27 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 1198_1220 | 92 | 1285 | Zinc finger | C2H2-type 28 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 1229_1252 | 92 | 1285 | Zinc finger | C2H2-type 29 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 1259_1282 | 92 | 1285 | Zinc finger | C2H2-type 30 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 138_160 | 92 | 1285 | Zinc finger | C2H2-type 2 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 166_188 | 92 | 1285 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 194_216 | 92 | 1285 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 222_244 | 92 | 1285 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 263_286 | 92 | 1285 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 295_318 | 92 | 1285 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 323_345 | 92 | 1285 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 409_433 | 92 | 1285 | Zinc finger | C2H2-type 9%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 441_464 | 92 | 1285 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 480_503 | 92 | 1285 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 517_540 | 92 | 1285 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 563_588 | 92 | 1285 | Zinc finger | C2H2-type 13%3B atypical |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 632_654 | 92 | 1285 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 662_684 | 92 | 1285 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 692_715 | 92 | 1285 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 720_743 | 92 | 1285 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 750_773 | 92 | 1285 | Zinc finger | C2H2-type 18 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 781_803 | 92 | 1285 | Zinc finger | C2H2-type 19 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 807_830 | 92 | 1285 | Zinc finger | C2H2-type 20 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 886_908 | 92 | 1285 | Zinc finger | C2H2-type 21%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 930_952 | 92 | 1285 | Zinc finger | C2H2-type 22 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000262383 | - | 4 | 9 | 959_981 | 92 | 1285 | Zinc finger | C2H2-type 23 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 1020_1042 | 92 | 1285 | Zinc finger | C2H2-type 24 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 1064_1082 | 92 | 1285 | Zinc finger | C2H2-type 25%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 1120_1143 | 92 | 1285 | Zinc finger | C2H2-type 26 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 1168_1190 | 92 | 1285 | Zinc finger | C2H2-type 27 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 1198_1220 | 92 | 1285 | Zinc finger | C2H2-type 28 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 1229_1252 | 92 | 1285 | Zinc finger | C2H2-type 29 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 1259_1282 | 92 | 1285 | Zinc finger | C2H2-type 30 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 138_160 | 92 | 1285 | Zinc finger | C2H2-type 2 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 166_188 | 92 | 1285 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 194_216 | 92 | 1285 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 222_244 | 92 | 1285 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 263_286 | 92 | 1285 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 295_318 | 92 | 1285 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 323_345 | 92 | 1285 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 409_433 | 92 | 1285 | Zinc finger | C2H2-type 9%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 441_464 | 92 | 1285 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 480_503 | 92 | 1285 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 517_540 | 92 | 1285 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 563_588 | 92 | 1285 | Zinc finger | C2H2-type 13%3B atypical |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 632_654 | 92 | 1285 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 662_684 | 92 | 1285 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 692_715 | 92 | 1285 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 720_743 | 92 | 1285 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 750_773 | 92 | 1285 | Zinc finger | C2H2-type 18 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 781_803 | 92 | 1285 | Zinc finger | C2H2-type 19 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 807_830 | 92 | 1285 | Zinc finger | C2H2-type 20 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 886_908 | 92 | 1285 | Zinc finger | C2H2-type 21%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 930_952 | 92 | 1285 | Zinc finger | C2H2-type 22 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000561648 | - | 3 | 8 | 959_981 | 92 | 1285 | Zinc finger | C2H2-type 23 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 1020_1042 | 32 | 1225 | Zinc finger | C2H2-type 24 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 1064_1082 | 32 | 1225 | Zinc finger | C2H2-type 25%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 1120_1143 | 32 | 1225 | Zinc finger | C2H2-type 26 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 1168_1190 | 32 | 1225 | Zinc finger | C2H2-type 27 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 1198_1220 | 32 | 1225 | Zinc finger | C2H2-type 28 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 1229_1252 | 32 | 1225 | Zinc finger | C2H2-type 29 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 1259_1282 | 32 | 1225 | Zinc finger | C2H2-type 30 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 138_160 | 32 | 1225 | Zinc finger | C2H2-type 2 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 166_188 | 32 | 1225 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 194_216 | 32 | 1225 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 222_244 | 32 | 1225 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 263_286 | 32 | 1225 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 295_318 | 32 | 1225 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 323_345 | 32 | 1225 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 409_433 | 32 | 1225 | Zinc finger | C2H2-type 9%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 441_464 | 32 | 1225 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 480_503 | 32 | 1225 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 517_540 | 32 | 1225 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 563_588 | 32 | 1225 | Zinc finger | C2H2-type 13%3B atypical |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 632_654 | 32 | 1225 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 662_684 | 32 | 1225 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 67_93 | 32 | 1225 | Zinc finger | C2H2-type 1%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 692_715 | 32 | 1225 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 720_743 | 32 | 1225 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 750_773 | 32 | 1225 | Zinc finger | C2H2-type 18 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 781_803 | 32 | 1225 | Zinc finger | C2H2-type 19 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 807_830 | 32 | 1225 | Zinc finger | C2H2-type 20 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 886_908 | 32 | 1225 | Zinc finger | C2H2-type 21%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 930_952 | 32 | 1225 | Zinc finger | C2H2-type 22 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562520 | - | 3 | 8 | 959_981 | 32 | 1225 | Zinc finger | C2H2-type 23 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 1020_1042 | 32 | 1225 | Zinc finger | C2H2-type 24 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 1064_1082 | 32 | 1225 | Zinc finger | C2H2-type 25%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 1120_1143 | 32 | 1225 | Zinc finger | C2H2-type 26 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 1168_1190 | 32 | 1225 | Zinc finger | C2H2-type 27 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 1198_1220 | 32 | 1225 | Zinc finger | C2H2-type 28 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 1229_1252 | 32 | 1225 | Zinc finger | C2H2-type 29 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 1259_1282 | 32 | 1225 | Zinc finger | C2H2-type 30 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 138_160 | 32 | 1225 | Zinc finger | C2H2-type 2 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 166_188 | 32 | 1225 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 194_216 | 32 | 1225 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 222_244 | 32 | 1225 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 263_286 | 32 | 1225 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 295_318 | 32 | 1225 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 323_345 | 32 | 1225 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 409_433 | 32 | 1225 | Zinc finger | C2H2-type 9%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 441_464 | 32 | 1225 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 480_503 | 32 | 1225 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 517_540 | 32 | 1225 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 563_588 | 32 | 1225 | Zinc finger | C2H2-type 13%3B atypical |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 632_654 | 32 | 1225 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 662_684 | 32 | 1225 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 67_93 | 32 | 1225 | Zinc finger | C2H2-type 1%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 692_715 | 32 | 1225 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 720_743 | 32 | 1225 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 750_773 | 32 | 1225 | Zinc finger | C2H2-type 18 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 781_803 | 32 | 1225 | Zinc finger | C2H2-type 19 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 807_830 | 32 | 1225 | Zinc finger | C2H2-type 20 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 886_908 | 32 | 1225 | Zinc finger | C2H2-type 21%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 930_952 | 32 | 1225 | Zinc finger | C2H2-type 22 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000562871 | - | 2 | 7 | 959_981 | 32 | 1225 | Zinc finger | C2H2-type 23 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 1020_1042 | 32 | 1225 | Zinc finger | C2H2-type 24 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 1064_1082 | 32 | 1225 | Zinc finger | C2H2-type 25%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 1120_1143 | 32 | 1225 | Zinc finger | C2H2-type 26 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 1168_1190 | 32 | 1225 | Zinc finger | C2H2-type 27 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 1198_1220 | 32 | 1225 | Zinc finger | C2H2-type 28 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 1229_1252 | 32 | 1225 | Zinc finger | C2H2-type 29 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 1259_1282 | 32 | 1225 | Zinc finger | C2H2-type 30 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 138_160 | 32 | 1225 | Zinc finger | C2H2-type 2 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 166_188 | 32 | 1225 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 194_216 | 32 | 1225 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 222_244 | 32 | 1225 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 263_286 | 32 | 1225 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 295_318 | 32 | 1225 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 323_345 | 32 | 1225 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 409_433 | 32 | 1225 | Zinc finger | C2H2-type 9%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 441_464 | 32 | 1225 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 480_503 | 32 | 1225 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 517_540 | 32 | 1225 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 563_588 | 32 | 1225 | Zinc finger | C2H2-type 13%3B atypical |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 632_654 | 32 | 1225 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 662_684 | 32 | 1225 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 67_93 | 32 | 1225 | Zinc finger | C2H2-type 1%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 692_715 | 32 | 1225 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 720_743 | 32 | 1225 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 750_773 | 32 | 1225 | Zinc finger | C2H2-type 18 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 781_803 | 32 | 1225 | Zinc finger | C2H2-type 19 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 807_830 | 32 | 1225 | Zinc finger | C2H2-type 20 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 886_908 | 32 | 1225 | Zinc finger | C2H2-type 21%3B degenerate |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 930_952 | 32 | 1225 | Zinc finger | C2H2-type 22 |
Hgene | >ZNF423 | chr16:49764682 | chr10:70545893 | ENST00000563137 | - | 3 | 8 | 959_981 | 32 | 1225 | Zinc finger | C2H2-type 23 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 594_618 | 883 | 1151 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 594_618 | 868 | 1136 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 594_618 | 868 | 1136 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 293_361 | 883 | 1151 | Compositional bias | Note=Arg-rich |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 673_889 | 883 | 1151 | Compositional bias | Note=Glu-rich |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 73_79 | 883 | 1151 | Compositional bias | Note=Poly-Ala |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 293_361 | 868 | 1136 | Compositional bias | Note=Arg-rich |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 673_889 | 868 | 1136 | Compositional bias | Note=Glu-rich |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 73_79 | 868 | 1136 | Compositional bias | Note=Poly-Ala |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 293_361 | 868 | 1136 | Compositional bias | Note=Arg-rich |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 673_889 | 868 | 1136 | Compositional bias | Note=Glu-rich |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 73_79 | 868 | 1136 | Compositional bias | Note=Poly-Ala |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 636_670 | 883 | 1151 | Domain | SAP |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 636_670 | 868 | 1136 | Domain | SAP |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 636_670 | 868 | 1136 | Domain | SAP |
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FusionGeneSequence for ZNF423_CCAR1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000535016_chr10_70545893_+_360aa MHKKRVEEGEASDFSLAWDSSVTAAGGLEGEPECDQKTSRALEDRNSVTSQEERNEDDEDMEDESIYTCDHCQQDFESLADLTDHRAHRC PGDRDEEEMTKRDDKRDINRYCKERPSKDKEKEKTQMITINRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGLHLSRAQVKKLLNKVVLR ESCFYRKLTDTSKDEENHEESESLQEDMLGNRLLLPTPTVKQESKDVEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEK TDEDEKTILNLENSNKSLSGELREVKKDLSQLQENLKISENMNLQFENQMNKTIRNLSTVMDEIHTVLKKDNVKNEDKDQKSKENGASVX >In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000265872_chr10_70545893_+_360aa MHKKRVEEGEASDFSLAWDSSVTAAGGLEGEPECDQKTSRALEDRNSVTSQEERNEDDEDMEDESIYTCDHCQQDFESLADLTDHRAHRC PGDRDEEEMTKRDDKRDINRYCKERPSKDKEKEKTQMITINRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGLHLSRAQVKKLLNKVVLR ESCFYRKLTDTSKDEENHEESESLQEDMLGNRLLLPTPTVKQESKDVEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEK TDEDEKTILNLENSNKSLSGELREVKKDLSQLQENLKISENMNLQFENQMNKTIRNLSTVMDEIHTVLKKDNVKNEDKDQKSKENGASVX >In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000543719_chr10_70545893_+_360aa MHKKRVEEGEASDFSLAWDSSVTAAGGLEGEPECDQKTSRALEDRNSVTSQEERNEDDEDMEDESIYTCDHCQQDFESLADLTDHRAHRC PGDRDEEEMTKRDDKRDINRYCKERPSKDKEKEKTQMITINRDLLMAFVYFDQSHCGYLLEKDLEEILYTLGLHLSRAQVKKLLNKVVLR ESCFYRKLTDTSKDEENHEESESLQEDMLGNRLLLPTPTVKQESKDVEENVGLIVYNGAMVDVGSLLQKLEKSEKVRAEVEQKLQLLEEK TDEDEKTILNLENSNKSLSGELREVKKDLSQLQENLKISENMNLQFENQMNKTIRNLSTVMDEIHTVLKKDNVKNEDKDQKSKENGASVX |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000535016_chr10_70545893_+_1080nt ATGCATAAGAAGAGGGTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCAGCAGGAGGCCTAGAAGGA GAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGAC ATGGAGGATGAATCAATTTACACCTGCGATCACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGT CCTGGAGATAGGGATGAGGAAGAAATGACCAAACGAGATGACAAAAGAGATATCAACAGATACTGCAAGGAGAGGCCCTCTAAAGATAAG GAAAAAGAAAAGACTCAAATGATCACAATTAACAGAGATCTGTTAATGGCTTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTT GAAAAGGATTTGGAAGAAATACTTTATACTCTTGGACTACATCTTTCTCGGGCTCAGGTAAAGAAGCTTCTTAATAAAGTAGTGCTCCGT GAATCTTGCTTTTACCGGAAATTAACAGACACCTCAAAAGATGAAGAGAACCATGAAGAGTCTGAGTCATTGCAGGAAGATATGCTAGGA AACAGATTATTACTTCCAACACCAACAGTAAAGCAGGAATCAAAGGATGTGGAAGAAAATGTTGGCCTCATTGTGTACAATGGTGCAATG GTAGATGTAGGAAGCCTCTTGCAAAAATTGGAAAAGAGCGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTGCAGTTACTAGAAGAAAAA ACAGATGAAGATGAAAAAACCATATTAAATTTGGAGAATTCCAACAAAAGCCTCTCTGGTGAACTCAGAGAAGTTAAAAAGGACCTTAGT CAGTTACAAGAAAACTTAAAGATTTCGGAAAACATGAATTTACAATTTGAAAACCAAATGAATAAGACAATCAGAAACTTATCTACGGTA ATGGATGAAATCCACACTGTTCTCAAGAAGGATAATGTAAAGAATGAAGACAAAGATCAAAAATCCAAGGAGAATGGTGCCAGTGTATGA >In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000265872_chr10_70545893_+_1080nt ATGCATAAGAAGAGGGTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCAGCAGGAGGCCTAGAAGGA GAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGAC ATGGAGGATGAATCAATTTACACCTGCGATCACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGT CCTGGAGATAGGGATGAGGAAGAAATGACCAAACGAGATGACAAAAGAGATATCAACAGATACTGCAAGGAGAGGCCCTCTAAAGATAAG GAAAAAGAAAAGACTCAAATGATCACAATTAACAGAGATCTGTTAATGGCTTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTT GAAAAGGATTTGGAAGAAATACTTTATACTCTTGGACTACATCTTTCTCGGGCTCAGGTAAAGAAGCTTCTTAATAAAGTAGTGCTCCGT GAATCTTGCTTTTACCGGAAATTAACAGACACCTCAAAAGATGAAGAGAACCATGAAGAGTCTGAGTCATTGCAGGAAGATATGCTAGGA AACAGATTATTACTTCCAACACCAACAGTAAAGCAGGAATCAAAGGATGTGGAAGAAAATGTTGGCCTCATTGTGTACAATGGTGCAATG GTAGATGTAGGAAGCCTCTTGCAAAAATTGGAAAAGAGCGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTGCAGTTACTAGAAGAAAAA ACAGATGAAGATGAAAAAACCATATTAAATTTGGAGAATTCCAACAAAAGCCTCTCTGGTGAACTCAGAGAAGTTAAAAAGGACCTTAGT CAGTTACAAGAAAACTTAAAGATTTCGGAAAACATGAATTTACAATTTGAAAACCAAATGAATAAGACAATCAGAAACTTATCTACGGTA ATGGATGAAATCCACACTGTTCTCAAGAAGGATAATGTAAAGAATGAAGACAAAGATCAAAAATCCAAGGAGAATGGTGCCAGTGTATGA >In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000543719_chr10_70545893_+_1080nt ATGCATAAGAAGAGGGTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCAGCAGGAGGCCTAGAAGGA GAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGAC ATGGAGGATGAATCAATTTACACCTGCGATCACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGT CCTGGAGATAGGGATGAGGAAGAAATGACCAAACGAGATGACAAAAGAGATATCAACAGATACTGCAAGGAGAGGCCCTCTAAAGATAAG GAAAAAGAAAAGACTCAAATGATCACAATTAACAGAGATCTGTTAATGGCTTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTT GAAAAGGATTTGGAAGAAATACTTTATACTCTTGGACTACATCTTTCTCGGGCTCAGGTAAAGAAGCTTCTTAATAAAGTAGTGCTCCGT GAATCTTGCTTTTACCGGAAATTAACAGACACCTCAAAAGATGAAGAGAACCATGAAGAGTCTGAGTCATTGCAGGAAGATATGCTAGGA AACAGATTATTACTTCCAACACCAACAGTAAAGCAGGAATCAAAGGATGTGGAAGAAAATGTTGGCCTCATTGTGTACAATGGTGCAATG GTAGATGTAGGAAGCCTCTTGCAAAAATTGGAAAAGAGCGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTGCAGTTACTAGAAGAAAAA ACAGATGAAGATGAAAAAACCATATTAAATTTGGAGAATTCCAACAAAAGCCTCTCTGGTGAACTCAGAGAAGTTAAAAAGGACCTTAGT CAGTTACAAGAAAACTTAAAGATTTCGGAAAACATGAATTTACAATTTGAAAACCAAATGAATAAGACAATCAGAAACTTATCTACGGTA ATGGATGAAATCCACACTGTTCTCAAGAAGGATAATGTAAAGAATGAAGACAAAGATCAAAAATCCAAGGAGAATGGTGCCAGTGTATGA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000535016_chr10_70545893_+_1420nt GGAAAACTTCCTGGAGAAGGATGGATTTTACCCTGTAAAAGAAGAAAGACATGGATGCATAAGAAGAGGGTTGAAGAGGGGGAGGCCTCA GACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCAGCAGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTG GAAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGACATGGAGGATGAATCAATTTACACCTGCGATCACTGT CAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGATAGGGATGAGGAAGAAATGACCAAACGA GATGACAAAAGAGATATCAACAGATACTGCAAGGAGAGGCCCTCTAAAGATAAGGAAAAAGAAAAGACTCAAATGATCACAATTAACAGA GATCTGTTAATGGCTTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAATACTTTATACTCTTGGA CTACATCTTTCTCGGGCTCAGGTAAAGAAGCTTCTTAATAAAGTAGTGCTCCGTGAATCTTGCTTTTACCGGAAATTAACAGACACCTCA AAAGATGAAGAGAACCATGAAGAGTCTGAGTCATTGCAGGAAGATATGCTAGGAAACAGATTATTACTTCCAACACCAACAGTAAAGCAG GAATCAAAGGATGTGGAAGAAAATGTTGGCCTCATTGTGTACAATGGTGCAATGGTAGATGTAGGAAGCCTCTTGCAAAAATTGGAAAAG AGCGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTGCAGTTACTAGAAGAAAAAACAGATGAAGATGAAAAAACCATATTAAATTTGGAG AATTCCAACAAAAGCCTCTCTGGTGAACTCAGAGAAGTTAAAAAGGACCTTAGTCAGTTACAAGAAAACTTAAAGATTTCGGAAAACATG AATTTACAATTTGAAAACCAAATGAATAAGACAATCAGAAACTTATCTACGGTAATGGATGAAATCCACACTGTTCTCAAGAAGGATAAT GTAAAGAATGAAGACAAAGATCAAAAATCCAAGGAGAATGGTGCCAGTGTATGATAAAATCCATGTAGTGATGAGGAATGGTGTTAAATA ATGTAATATATAAAAATCATGATATAAGAATGTTTGAAGGTGATGCATGTTTGATTTTAGTAGTATAAATGTATTTTAGTTCAAATGATG TATAAAGTTTTATGAATGTGAGTTTCTGCTTTTGAAAATTGCTTGTAATTCCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAA >In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000265872_chr10_70545893_+_2245nt GGAAAACTTCCTGGAGAAGGATGGATTTTACCCTGTAAAAGAAGAAAGACATGGATGCATAAGAAGAGGGTTGAAGAGGGGGAGGCCTCA GACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCAGCAGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTG GAAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGACATGGAGGATGAATCAATTTACACCTGCGATCACTGT CAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGATAGGGATGAGGAAGAAATGACCAAACGA GATGACAAAAGAGATATCAACAGATACTGCAAGGAGAGGCCCTCTAAAGATAAGGAAAAAGAAAAGACTCAAATGATCACAATTAACAGA GATCTGTTAATGGCTTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAATACTTTATACTCTTGGA CTACATCTTTCTCGGGCTCAGGTAAAGAAGCTTCTTAATAAAGTAGTGCTCCGTGAATCTTGCTTTTACCGGAAATTAACAGACACCTCA AAAGATGAAGAGAACCATGAAGAGTCTGAGTCATTGCAGGAAGATATGCTAGGAAACAGATTATTACTTCCAACACCAACAGTAAAGCAG GAATCAAAGGATGTGGAAGAAAATGTTGGCCTCATTGTGTACAATGGTGCAATGGTAGATGTAGGAAGCCTCTTGCAAAAATTGGAAAAG AGCGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTGCAGTTACTAGAAGAAAAAACAGATGAAGATGAAAAAACCATATTAAATTTGGAG AATTCCAACAAAAGCCTCTCTGGTGAACTCAGAGAAGTTAAAAAGGACCTTAGTCAGTTACAAGAAAACTTAAAGATTTCGGAAAACATG AATTTACAATTTGAAAACCAAATGAATAAGACAATCAGAAACTTATCTACGGTAATGGATGAAATCCACACTGTTCTCAAGAAGGATAAT GTAAAGAATGAAGACAAAGATCAAAAATCCAAGGAGAATGGTGCCAGTGTATGATAAAATCCATGTAGTGATGAGGAATGGTGTTAAATA ATGTAATATATAAAAATCATGATATAAGAATGTTTGAAGGTGATGCATGTTTGATTTTAGTAGTATAAATGTATTTTAGTTCAAATGATG TATAAAGTTTTATGAATGTGAGTTTCTGCTTTTGAAAATTGCTTGTAATTCCTAGCCTTCAAATTATTAAACACTCCTTGAGTGAAATAA TTTTGCATTGCAAAGTGTTTTAGGATGAACTTTGTTATAGTTTTAACTCCAATAAAGTTCATCAGTTTAATTGACTGTAGTATTTAATTA CCAAATTTCTTTTATTAAAATGCCTAGAAATTTTTAATTTATAGAATTATTAGGTTTTAAAATTTTTAGTTCATCTGTTAAAATTTCAGT CAAAATCATAAAATAGCATGATGCTTAATTTTTGCAAGTTTTTTGAAACTTTTTGTTTTTTTTACTCATCACCAAAAAATCCCCTCTTGA TCAGTCTCTAAAAGCATTCATTAAAAATTCAGTTCAGGCCGGGCACGGTGGCTCACACCTGTAATCCCAACACTTTGGGAGGCCGAGGCA GGTGGATCACCTGAGGTTAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCGGTCTCTACTAAAAATATAAAAATTAGCTGGGCA TGGTGGTGGGTGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTCACTCAGG ATCATGCAGCTACACTCCAGCCTGGGCGACAAGAGTGAAACTCCATCTCAAAAAGAAAAAAAAAAAAAATCAGTTTATTTGAAAGACAGT ATATCAGAAAGAAAGAAGCAATAGAGAACTAGTATTGTTCTTTATGGGTTAGACTTTACATAATATTAGTTGTCCTGATGTCAATGTTAC TGCTTTCAATTAATTTTTCTACTTTCCCAGAATAGCATCTATATTCCTTTTAATTTTGAGGGTTTAAAAAAAAATGCAGTGTATGTCAAA >In-frame_ZNF423_ENST00000561648_chr16_49764682_-_CCAR1_ENST00000543719_chr10_70545893_+_1134nt GGAAAACTTCCTGGAGAAGGATGGATTTTACCCTGTAAAAGAAGAAAGACATGGATGCATAAGAAGAGGGTTGAAGAGGGGGAGGCCTCA GACTTCTCGCTGGCCTGGGATTCCTCCGTGACAGCAGCAGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTG GAAGACAGGAACAGCGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGACATGGAGGATGAATCAATTTACACCTGCGATCACTGT CAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGATAGGGATGAGGAAGAAATGACCAAACGA GATGACAAAAGAGATATCAACAGATACTGCAAGGAGAGGCCCTCTAAAGATAAGGAAAAAGAAAAGACTCAAATGATCACAATTAACAGA GATCTGTTAATGGCTTTTGTTTATTTTGATCAAAGTCATTGTGGTTACCTTCTTGAAAAGGATTTGGAAGAAATACTTTATACTCTTGGA CTACATCTTTCTCGGGCTCAGGTAAAGAAGCTTCTTAATAAAGTAGTGCTCCGTGAATCTTGCTTTTACCGGAAATTAACAGACACCTCA AAAGATGAAGAGAACCATGAAGAGTCTGAGTCATTGCAGGAAGATATGCTAGGAAACAGATTATTACTTCCAACACCAACAGTAAAGCAG GAATCAAAGGATGTGGAAGAAAATGTTGGCCTCATTGTGTACAATGGTGCAATGGTAGATGTAGGAAGCCTCTTGCAAAAATTGGAAAAG AGCGAAAAAGTAAGAGCTGAGGTAGAACAGAAGCTGCAGTTACTAGAAGAAAAAACAGATGAAGATGAAAAAACCATATTAAATTTGGAG AATTCCAACAAAAGCCTCTCTGGTGAACTCAGAGAAGTTAAAAAGGACCTTAGTCAGTTACAAGAAAACTTAAAGATTTCGGAAAACATG AATTTACAATTTGAAAACCAAATGAATAAGACAATCAGAAACTTATCTACGGTAATGGATGAAATCCACACTGTTCTCAAGAAGGATAAT |
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FusionGenePPI for ZNF423_CCAR1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZNF423 | PARP1, SMAD4, SMAD1, EBF1, EBF2, EBF3, USP7, CEP290, LYN, BRCA1, MTA1, ZNF219, RBBP7, MBD3L1, ZG16B | CCAR1 | YWHAQ, MDM2, TP53, FYCO1, SF3A2, SIRT7, BARD1, SMURF1, U2AF2, CHERP, RBM10, HNRNPK, RNF113A, UBL4A, GOLGA2, PIH1D3, GRPEL1, FHL3, QPRT, WRAP73, ACTR1A, ACTR1B, CAND1, RCN1, SF3B3, DCTN1, DCTN2, DYNC1I2, PCNA, PRIM1, PSMD4, SAFB2, TNKS1BP1, TPM2, NTRK1, MED4, SSX2IP, HIST1H3E, MYO1C, XRCC3, EMC2, MMGT1, PCGF1, CCNB1, ZYX, IKBKG |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 1_249 | 883 | 1151 | AR |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 1_249 | 868 | 1136 | AR |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 1_249 | 868 | 1136 | AR |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 643_1150 | 883 | 1151 | GATA1 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 643_1150 | 868 | 1136 | GATA1 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 643_1150 | 868 | 1136 | GATA1 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000265872 | + | 18 | 25 | 203_660 | 883 | 1151 | GATA2 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000535016 | + | 17 | 24 | 203_660 | 868 | 1136 | GATA2 |
Tgene | CCAR1 | chr16:49764682 | chr10:70545893 | ENST00000543719 | + | 17 | 24 | 203_660 | 868 | 1136 | GATA2 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNF423_CCAR1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF423_CCAR1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ZNF423 | C0236733 | Amphetamine-Related Disorders | 1 | CTD_human |
Hgene | ZNF423 | C3539071 | NEPHRONOPHTHISIS 14 | 1 | UNIPROT |