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Fusion gene ID: 43060 |
FusionGeneSummary for ZNF195_RPL36A |
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Fusion gene information | Fusion gene name: ZNF195_RPL36A | Fusion gene ID: 43060 | Hgene | Tgene | Gene symbol | ZNF195 | RPL36A | Gene ID | 7748 | 6173 |
Gene name | zinc finger protein 195 | ribosomal protein L36a | |
Synonyms | HRF1|ZNFP104 | L36A|L44L|MIG6|RPL44 | |
Cytomap | 11p15.4 | Xq22.1 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein 195hypoxia-regulated factor-1krueppel family zinc finger protein (znfp104) | 60S ribosomal protein L36a60S ribosomal protein L44L44-like ribosomal proteincell growth-inhibiting gene 15 proteincell migration-inducing gene 6 proteindJ164F3.3 (ribosomal protein L44)large ribosomal subunit protein eL42 | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | O14628 | P83881 | |
Ensembl transtripts involved in fusion gene | ENST00000528796, ENST00000354599, ENST00000399602, ENST00000343338, ENST00000429541, ENST00000005082, ENST00000526601, ENST00000438262, ENST00000527386, | ENST00000427805, ENST00000553110, ENST00000471855, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 1 X 1 X 1=1 |
# samples | 2 | 1 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: ZNF195 [Title/Abstract] AND RPL36A [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | RPL36A | GO:0002181 | cytoplasmic translation | 25957688 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BE540117 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000528796 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000528796 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000528796 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000354599 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000354599 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000354599 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000399602 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000399602 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000399602 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000343338 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000343338 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000343338 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000429541 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000429541 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000429541 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000005082 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000005082 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000005082 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000526601 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000526601 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000526601 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000438262 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000438262 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000438262 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-3CDS | ENST00000527386 | ENST00000427805 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-5UTR | ENST00000527386 | ENST00000553110 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
intron-intron | ENST00000527386 | ENST00000471855 | ZNF195 | chr11 | 3381262 | - | RPL36A | chrX | 100645962 | + |
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FusionProtFeatures for ZNF195_RPL36A |
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Hgene | Tgene |
ZNF195 | RPL36A |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZNF195_RPL36A |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZNF195_RPL36A |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNF195_RPL36A |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF195_RPL36A |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |