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Fusion gene ID: 43007 |
FusionGeneSummary for ZNF133_MS4A4A |
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Fusion gene information | Fusion gene name: ZNF133_MS4A4A | Fusion gene ID: 43007 | Hgene | Tgene | Gene symbol | ZNF133 | MS4A4A | Gene ID | 7692 | 51338 |
Gene name | zinc finger protein 133 | membrane spanning 4-domains A4A | |
Synonyms | ZNF150|pHZ-13|pHZ-66 | 4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7 | |
Cytomap | 20p11.23 | 11q12.2 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein 133zinc finger protein 133 (clone pHZ-13)zinc finger protein 150 (pHZ-66) | membrane-spanning 4-domains subfamily A member 4ACD20 antigen-like 1Fc epsilon receptor beta subunit homologfour-span transmembrane protein 1membrane-spanning 4-domains, subfamily A, member 4 | |
Modification date | 20180523 | 20180429 | |
UniProtAcc | P52736 | Q96JQ5 | |
Ensembl transtripts involved in fusion gene | ENST00000377671, ENST00000396026, ENST00000402618, ENST00000401790, ENST00000538547, ENST00000535822, ENST00000316358, ENST00000462170, | ENST00000532114, ENST00000337908, ENST00000355131, ENST00000395016, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 4 X 2 X 4=32 |
# samples | 2 | 4 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ZNF133 [Title/Abstract] AND MS4A4A [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LGG | TCGA-S9-A89V-01A | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-3CDS | ENST00000377671 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000377671 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000377671 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000377671 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000396026 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000396026 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000396026 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000396026 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000402618 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000402618 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000402618 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000402618 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000401790 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000401790 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000401790 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000401790 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000538547 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000538547 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000538547 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000538547 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000535822 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-3CDS | ENST00000535822 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000535822 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
5UTR-5UTR | ENST00000535822 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-3CDS | ENST00000316358 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-3CDS | ENST00000316358 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-5UTR | ENST00000316358 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-5UTR | ENST00000316358 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-3CDS | ENST00000462170 | ENST00000532114 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-3CDS | ENST00000462170 | ENST00000337908 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-5UTR | ENST00000462170 | ENST00000355131 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
intron-5UTR | ENST00000462170 | ENST00000395016 | ZNF133 | chr20 | 18269248 | + | MS4A4A | chr11 | 60059698 | + |
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FusionProtFeatures for ZNF133_MS4A4A |
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Hgene | Tgene |
ZNF133 | MS4A4A |
May be involved in signal transduction as a component ofa multimeric receptor complex. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZNF133_MS4A4A |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZNF133_MS4A4A |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZNF133 | ILK, PDPK1, MAPK6, TRIM28, FOS, MDM2, KRTAP10-7, MRS2, RPS27A, SAV1, STK3, TRIM24, MRPS7, STK4, DAP3, CLPP, MRPS2, FTL, MRPS23, TPD52 | MS4A4A |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNF133_MS4A4A |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF133_MS4A4A |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | MS4A4A | C0002395 | Alzheimer's Disease | 1 | CTD_human |
Tgene | MS4A4A | C3495559 | Juvenile arthritis | 1 | CTD_human |