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Fusion gene ID: 42962 |
FusionGeneSummary for ZMYM6_ACOX3 |
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Fusion gene information | Fusion gene name: ZMYM6_ACOX3 | Fusion gene ID: 42962 | Hgene | Tgene | Gene symbol | ZMYM6 | ACOX3 | Gene ID | 9204 | 8310 |
Gene name | zinc finger MYM-type containing 6 | acyl-CoA oxidase 3, pristanoyl | |
Synonyms | Buster2|MYM|ZBED7|ZNF198L4|ZNF258 | - | |
Cytomap | 1p34.3 | 4p16.1 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger MYM-type protein 6transposon-derived Buster2 transposase-like proteinzinc finger protein 258zinc finger, BED-type containing 7zinc finger, MYM-type 6 | peroxisomal acyl-coenzyme A oxidase 3BRCACoxacyl-Coenzyme A oxidase 3, pristanoylbranched-chain acyl-CoA oxidasepristanoyl-CoA oxidase | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | O95789 | O15254 | |
Ensembl transtripts involved in fusion gene | ENST00000487874, ENST00000373340, ENST00000493328, ENST00000357182, ENST00000317538, ENST00000373333, | ENST00000356406, ENST00000413009, ENST00000503233, ENST00000515797, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 2 X 2 X 2=8 |
# samples | 2 | 2 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: ZMYM6 [Title/Abstract] AND ACOX3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BLCA | TCGA-DK-A3IS-01A | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000487874 | ENST00000356406 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000487874 | ENST00000413009 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000487874 | ENST00000503233 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-5UTR | ENST00000487874 | ENST00000515797 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
Frame-shift | ENST00000373340 | ENST00000356406 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000373340 | ENST00000413009 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000373340 | ENST00000503233 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-5UTR | ENST00000373340 | ENST00000515797 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5UTR-3CDS | ENST00000493328 | ENST00000356406 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5UTR-intron | ENST00000493328 | ENST00000413009 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5UTR-intron | ENST00000493328 | ENST00000503233 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5UTR-5UTR | ENST00000493328 | ENST00000515797 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
Frame-shift | ENST00000357182 | ENST00000356406 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000357182 | ENST00000413009 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000357182 | ENST00000503233 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-5UTR | ENST00000357182 | ENST00000515797 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
Frame-shift | ENST00000317538 | ENST00000356406 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000317538 | ENST00000413009 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000317538 | ENST00000503233 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-5UTR | ENST00000317538 | ENST00000515797 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
Frame-shift | ENST00000373333 | ENST00000356406 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000373333 | ENST00000413009 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-intron | ENST00000373333 | ENST00000503233 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
5CDS-5UTR | ENST00000373333 | ENST00000515797 | ZMYM6 | chr1 | 35496148 | - | ACOX3 | chr4 | 8375355 | - |
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FusionProtFeatures for ZMYM6_ACOX3 |
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Hgene | Tgene |
ZMYM6 | ACOX3 |
Oxidizes the CoA-esters of 2-methyl-branched fattyacids. {ECO:0000250, ECO:0000269|PubMed:9271077}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZMYM6_ACOX3 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZMYM6_ACOX3 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZMYM6 | KLHL13, UCHL3, CTDSP2, RFPL4B, FHL3, HDAC7, FHL5, QPRT, TIMP2, ZNF707, LTBR, PLEKHO2, CRTAC1, GRB2, LSP1, TUFM, CCDC89, OPTN, ZNF232, LMO2, DEF8, HAVCR2, LZTS2, EMILIN1, CDA, ZNF263, FAM60A, ZNF18, TRAF1, ACOT12, TPGS2, LMNA | ACOX3 | PEX5, SMURF2, TMEM150A, FKBP6, MICU2, YTHDF1, HERC3, CENPH, HAUS7 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZMYM6_ACOX3 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZMYM6_ACOX3 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |