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Fusion gene ID: 4296 |
FusionGeneSummary for BOLA2_DMPK |
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Fusion gene information | Fusion gene name: BOLA2_DMPK | Fusion gene ID: 4296 | Hgene | Tgene | Gene symbol | BOLA2 | DMPK | Gene ID | 654483 | 1760 |
Gene name | bolA family member 2B | DM1 protein kinase | |
Synonyms | BOLA2 | DM|DM1|DM1PK|DMK|MDPK|MT-PK | |
Cytomap | 16p11.2 | 19q13.32 | |
Type of gene | protein-coding | protein-coding | |
Description | bolA-like protein 2BolA-like protein 2 member BbolA homolog 2BbolA-like protein 2B | myotonin-protein kinaseDM protein kinasedystrophia myotonica protein kinasemyotonic dystrophy associated protein kinasemyotonin protein kinase Athymopoietin homolog | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | Q9H3K6 | Q09013 | |
Ensembl transtripts involved in fusion gene | ENST00000330978, | ENST00000291270, ENST00000600757, ENST00000343373, ENST00000447742, ENST00000458663, ENST00000354227, ENST00000595361, | |
Fusion gene scores | * DoF score | 24 X 31 X 3=2232 | 3 X 3 X 1=9 |
# samples | 31 | 3 | |
** MAII score | log2(31/2232*10)=-2.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/9*10)=1.73696559416621 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: BOLA2 [Title/Abstract] AND DMPK [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | BOLA2 | GO:0044571 | [2Fe-2S] cluster assembly | 27519415 |
Hgene | BOLA2 | GO:0097428 | protein maturation by iron-sulfur cluster transfer | 27519415 |
Tgene | DMPK | GO:0006468 | protein phosphorylation | 10913253|11287000 |
Tgene | DMPK | GO:0008016 | regulation of heart contraction | 15598648 |
Tgene | DMPK | GO:0010657 | muscle cell apoptotic process | 18729234 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BG992769 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000330978 | ENST00000291270 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
intron-3CDS | ENST00000330978 | ENST00000600757 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
intron-3CDS | ENST00000330978 | ENST00000343373 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
intron-3CDS | ENST00000330978 | ENST00000447742 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
intron-3CDS | ENST00000330978 | ENST00000458663 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
intron-3CDS | ENST00000330978 | ENST00000354227 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
intron-intron | ENST00000330978 | ENST00000595361 | BOLA2 | chr16 | 29820907 | + | DMPK | chr19 | 46273901 | - |
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FusionProtFeatures for BOLA2_DMPK |
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Hgene | Tgene |
BOLA2 | DMPK |
Acts as a cytosolic iron-sulfur (Fe-S) cluster assemblyfactor that facilitates [2Fe-2S] cluster insertion into a subsetof cytosolic proteins (PubMed:26613676, PubMed:27519415). Actstogether with the monothiol glutaredoxin GLRX3 (PubMed:26613676,PubMed:27519415). {ECO:0000269|PubMed:26613676,ECO:0000269|PubMed:27519415}. | Non-receptor serine/threonine protein kinase which isnecessary for the maintenance of skeletal muscle structure andfunction. May play a role in myocyte differentiation and survivalby regulating the integrity of the nuclear envelope and theexpression of muscle-specific genes. May also phosphorylatePPP1R12A and inhibit the myosin phosphatase activity to regulatemyosin phosphorylation. Also critical to the modulation of cardiaccontractility and to the maintenance of proper cardiac conductionactivity probably through the regulation of cellular calciumhomeostasis. Phosphorylates PLN, a regulator of calcium pumps andmay regulate sarcoplasmic reticulum calcium uptake in myocytes.May also phosphorylate FXYD1/PLM which is able to induce chloridecurrents. May also play a role in synaptic plasticity.{ECO:0000269|PubMed:10811636, ECO:0000269|PubMed:10913253,ECO:0000269|PubMed:11287000, ECO:0000269|PubMed:15598648,ECO:0000269|PubMed:21457715, ECO:0000269|PubMed:21949239}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for BOLA2_DMPK |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for BOLA2_DMPK |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for BOLA2_DMPK |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for BOLA2_DMPK |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | DMPK | C0027125 | Myotonia | 1 | CTD_human;HPO |
Tgene | DMPK | C0027126 | Myotonic Dystrophy | 1 | CTD_human |