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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 4296

FusionGeneSummary for BOLA2_DMPK

check button Fusion gene summary
Fusion gene informationFusion gene name: BOLA2_DMPK
Fusion gene ID: 4296
HgeneTgene
Gene symbol

BOLA2

DMPK

Gene ID

654483

1760

Gene namebolA family member 2BDM1 protein kinase
SynonymsBOLA2DM|DM1|DM1PK|DMK|MDPK|MT-PK
Cytomap

16p11.2

19q13.32

Type of geneprotein-codingprotein-coding
DescriptionbolA-like protein 2BolA-like protein 2 member BbolA homolog 2BbolA-like protein 2Bmyotonin-protein kinaseDM protein kinasedystrophia myotonica protein kinasemyotonic dystrophy associated protein kinasemyotonin protein kinase Athymopoietin homolog
Modification date2018051920180523
UniProtAcc

Q9H3K6

Q09013

Ensembl transtripts involved in fusion geneENST00000330978, ENST00000291270, 
ENST00000600757, ENST00000343373, 
ENST00000447742, ENST00000458663, 
ENST00000354227, ENST00000595361, 
Fusion gene scores* DoF score24 X 31 X 3=22323 X 3 X 1=9
# samples 313
** MAII scorelog2(31/2232*10)=-2.84799690655495
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(3/9*10)=1.73696559416621
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: BOLA2 [Title/Abstract] AND DMPK [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneBOLA2

GO:0044571

[2Fe-2S] cluster assembly

27519415

HgeneBOLA2

GO:0097428

protein maturation by iron-sulfur cluster transfer

27519415

TgeneDMPK

GO:0006468

protein phosphorylation

10913253|11287000

TgeneDMPK

GO:0008016

regulation of heart contraction

15598648

TgeneDMPK

GO:0010657

muscle cell apoptotic process

18729234


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1BG992769BOLA2chr16

29820907

+DMPKchr19

46273901

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-3CDSENST00000330978ENST00000291270BOLA2chr16

29820907

+DMPKchr19

46273901

-
intron-3CDSENST00000330978ENST00000600757BOLA2chr16

29820907

+DMPKchr19

46273901

-
intron-3CDSENST00000330978ENST00000343373BOLA2chr16

29820907

+DMPKchr19

46273901

-
intron-3CDSENST00000330978ENST00000447742BOLA2chr16

29820907

+DMPKchr19

46273901

-
intron-3CDSENST00000330978ENST00000458663BOLA2chr16

29820907

+DMPKchr19

46273901

-
intron-3CDSENST00000330978ENST00000354227BOLA2chr16

29820907

+DMPKchr19

46273901

-
intron-intronENST00000330978ENST00000595361BOLA2chr16

29820907

+DMPKchr19

46273901

-

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FusionProtFeatures for BOLA2_DMPK


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
BOLA2

Q9H3K6

DMPK

Q09013

Acts as a cytosolic iron-sulfur (Fe-S) cluster assemblyfactor that facilitates [2Fe-2S] cluster insertion into a subsetof cytosolic proteins (PubMed:26613676, PubMed:27519415). Actstogether with the monothiol glutaredoxin GLRX3 (PubMed:26613676,PubMed:27519415). {ECO:0000269|PubMed:26613676,ECO:0000269|PubMed:27519415}. Non-receptor serine/threonine protein kinase which isnecessary for the maintenance of skeletal muscle structure andfunction. May play a role in myocyte differentiation and survivalby regulating the integrity of the nuclear envelope and theexpression of muscle-specific genes. May also phosphorylatePPP1R12A and inhibit the myosin phosphatase activity to regulatemyosin phosphorylation. Also critical to the modulation of cardiaccontractility and to the maintenance of proper cardiac conductionactivity probably through the regulation of cellular calciumhomeostasis. Phosphorylates PLN, a regulator of calcium pumps andmay regulate sarcoplasmic reticulum calcium uptake in myocytes.May also phosphorylate FXYD1/PLM which is able to induce chloridecurrents. May also play a role in synaptic plasticity.{ECO:0000269|PubMed:10811636, ECO:0000269|PubMed:10913253,ECO:0000269|PubMed:11287000, ECO:0000269|PubMed:15598648,ECO:0000269|PubMed:21457715, ECO:0000269|PubMed:21949239}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for BOLA2_DMPK


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for BOLA2_DMPK


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for BOLA2_DMPK


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for BOLA2_DMPK


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneDMPKC0027125Myotonia1CTD_human;HPO
TgeneDMPKC0027126Myotonic Dystrophy1CTD_human