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Fusion gene ID: 42873 |
FusionGeneSummary for ZFYVE28_CCDC149 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ZFYVE28_CCDC149 | Fusion gene ID: 42873 | Hgene | Tgene | Gene symbol | ZFYVE28 | CCDC149 | Gene ID | 57732 | 91050 |
| Gene name | zinc finger FYVE-type containing 28 | coiled-coil domain containing 149 | |
| Synonyms | LST2|LYST2 | - | |
| Cytomap | 4p16.3 | 4p15.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | lateral signaling target protein 2 homologhLst2zinc finger FYVE domain-containing protein 28zinc finger, FYVE domain containing 28 | coiled-coil domain-containing protein 149 | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | Q9HCC9 | Q6ZUS6 | |
| Ensembl transtripts involved in fusion gene | ENST00000290974, ENST00000511071, ENST00000515312, ENST00000515169, ENST00000509171, ENST00000503000, ENST00000508471, ENST00000505421, | ENST00000504487, ENST00000428116, ENST00000389609, ENST00000502801, ENST00000508236, | |
| Fusion gene scores | * DoF score | 4 X 2 X 4=32 | 5 X 5 X 4=100 |
| # samples | 4 | 5 | |
| ** MAII score | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(5/100*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: ZFYVE28 [Title/Abstract] AND CCDC149 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | LGG | TCGA-DH-A669-01A | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000290974 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000290974 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000290974 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000290974 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-intron | ENST00000290974 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| In-frame | ENST00000511071 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000511071 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000511071 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000511071 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-intron | ENST00000511071 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-3CDS | ENST00000515312 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000515312 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000515312 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000515312 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-intron | ENST00000515312 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-3CDS | ENST00000515169 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000515169 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000515169 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000515169 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-intron | ENST00000515169 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| In-frame | ENST00000509171 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000509171 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000509171 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000509171 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-intron | ENST00000509171 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| In-frame | ENST00000503000 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000503000 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000503000 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-5UTR | ENST00000503000 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| 5CDS-intron | ENST00000503000 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-3CDS | ENST00000508471 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000508471 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000508471 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000508471 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-intron | ENST00000508471 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-3CDS | ENST00000505421 | ENST00000504487 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000505421 | ENST00000428116 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000505421 | ENST00000389609 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-5UTR | ENST00000505421 | ENST00000502801 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
| intron-intron | ENST00000505421 | ENST00000508236 | ZFYVE28 | chr4 | 2420012 | - | CCDC149 | chr4 | 24878319 | - |
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FusionProtFeatures for ZFYVE28_CCDC149 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| ZFYVE28 | CCDC149 |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000389609 | - | 1 | 13 | 259_286 | 21 | 530 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000389609 | - | 1 | 13 | 385_414 | 21 | 530 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000428116 | - | 0 | 5 | 1_199 | -34 | 87 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000428116 | - | 0 | 5 | 259_286 | -34 | 87 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000428116 | - | 0 | 5 | 385_414 | -34 | 87 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000502801 | - | 0 | 5 | 259_286 | 21 | 142 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000502801 | - | 0 | 5 | 385_414 | 21 | 142 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000504487 | - | 0 | 12 | 259_286 | 21 | 530 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000504487 | - | 0 | 12 | 385_414 | 21 | 530 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000389609 | - | 1 | 13 | 205_208 | 21 | 530 | Compositional bias | Note=Poly-Ser |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000428116 | - | 0 | 5 | 205_208 | -34 | 87 | Compositional bias | Note=Poly-Ser |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000502801 | - | 0 | 5 | 205_208 | 21 | 142 | Compositional bias | Note=Poly-Ser |
| Tgene | >CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000504487 | - | 0 | 12 | 205_208 | 21 | 530 | Compositional bias | Note=Poly-Ser |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >ZFYVE28 | chr4:2420012 | chr4:24878319 | ENST00000290974 | - | 1 | 13 | 817_879 | 13 | 888 | Zinc finger | FYVE-type |
| Hgene | >ZFYVE28 | chr4:2420012 | chr4:24878319 | ENST00000503000 | - | 1 | 7 | 817_879 | 13 | 288 | Zinc finger | FYVE-type |
| Hgene | >ZFYVE28 | chr4:2420012 | chr4:24878319 | ENST00000509171 | - | 1 | 5 | 817_879 | 13 | 173 | Zinc finger | FYVE-type |
| Hgene | >ZFYVE28 | chr4:2420012 | chr4:24878319 | ENST00000511071 | - | 1 | 12 | 817_879 | 13 | 858 | Zinc finger | FYVE-type |
| Hgene | >ZFYVE28 | chr4:2420012 | chr4:24878319 | ENST00000515169 | - | 1 | 7 | 817_879 | -164 | 164 | Zinc finger | FYVE-type |
| Hgene | >ZFYVE28 | chr4:2420012 | chr4:24878319 | ENST00000515312 | - | 1 | 13 | 817_879 | -188 | 818 | Zinc finger | FYVE-type |
| Tgene | CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000389609 | - | 1 | 13 | 1_199 | 21 | 530 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000502801 | - | 0 | 5 | 1_199 | 21 | 142 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CCDC149 | chr4:2420012 | chr4:24878319 | ENST00000504487 | - | 0 | 12 | 1_199 | 21 | 530 | Coiled coil | Ontology_term=ECO:0000255 |
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FusionGeneSequence for ZFYVE28_CCDC149 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_ZFYVE28_ENST00000290974_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_522aa MMNRFRKWLYKPKYLVCKRKLESKKEALLILSKELDTCQQERDQYKLMANQLRERHQSLKKKYRELIDGDPSLPPEKRKQANLAQLLRDS QDRNKHLGEEIKELQQRLGEVQGDNKLLRMTIAKQRLGDEAIGVRHFAAHEREDLVQQLERAKEQIESLEHDLQASVDELQDVKEERSSY QDKVERLNQELNHILSGHENRIIDVDALCMENRYLQERLKQLHEEVNLLKSNIAKYKNALERRKNSKGQGKSSSSALTGVLSAKQVQDLL SEDHGCSLPATPQSISDLKSLATALLETIHEKNMVIQHQRQTNKILGNRVAELEKKLRTLEVSGLWSLPGGKDTILFSDPTLPSGQRSRS PLLKFVEQPTENKADPKDGEAQKQEEDESCAAAEALTAPEDAGRPAVNSPANQSRGNQCKLFHPSLPQLPSEEEVNSLGREIIKLTKEQA >In-frame_ZFYVE28_ENST00000511071_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_522aa MMNRFRKWLYKPKYLVCKRKLESKKEALLILSKELDTCQQERDQYKLMANQLRERHQSLKKKYRELIDGDPSLPPEKRKQANLAQLLRDS QDRNKHLGEEIKELQQRLGEVQGDNKLLRMTIAKQRLGDEAIGVRHFAAHEREDLVQQLERAKEQIESLEHDLQASVDELQDVKEERSSY QDKVERLNQELNHILSGHENRIIDVDALCMENRYLQERLKQLHEEVNLLKSNIAKYKNALERRKNSKGQGKSSSSALTGVLSAKQVQDLL SEDHGCSLPATPQSISDLKSLATALLETIHEKNMVIQHQRQTNKILGNRVAELEKKLRTLEVSGLWSLPGGKDTILFSDPTLPSGQRSRS PLLKFVEQPTENKADPKDGEAQKQEEDESCAAAEALTAPEDAGRPAVNSPANQSRGNQCKLFHPSLPQLPSEEEVNSLGREIIKLTKEQA >In-frame_ZFYVE28_ENST00000509171_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_522aa MMNRFRKWLYKPKYLVCKRKLESKKEALLILSKELDTCQQERDQYKLMANQLRERHQSLKKKYRELIDGDPSLPPEKRKQANLAQLLRDS QDRNKHLGEEIKELQQRLGEVQGDNKLLRMTIAKQRLGDEAIGVRHFAAHEREDLVQQLERAKEQIESLEHDLQASVDELQDVKEERSSY QDKVERLNQELNHILSGHENRIIDVDALCMENRYLQERLKQLHEEVNLLKSNIAKYKNALERRKNSKGQGKSSSSALTGVLSAKQVQDLL SEDHGCSLPATPQSISDLKSLATALLETIHEKNMVIQHQRQTNKILGNRVAELEKKLRTLEVSGLWSLPGGKDTILFSDPTLPSGQRSRS PLLKFVEQPTENKADPKDGEAQKQEEDESCAAAEALTAPEDAGRPAVNSPANQSRGNQCKLFHPSLPQLPSEEEVNSLGREIIKLTKEQA >In-frame_ZFYVE28_ENST00000503000_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_522aa MMNRFRKWLYKPKYLVCKRKLESKKEALLILSKELDTCQQERDQYKLMANQLRERHQSLKKKYRELIDGDPSLPPEKRKQANLAQLLRDS QDRNKHLGEEIKELQQRLGEVQGDNKLLRMTIAKQRLGDEAIGVRHFAAHEREDLVQQLERAKEQIESLEHDLQASVDELQDVKEERSSY QDKVERLNQELNHILSGHENRIIDVDALCMENRYLQERLKQLHEEVNLLKSNIAKYKNALERRKNSKGQGKSSSSALTGVLSAKQVQDLL SEDHGCSLPATPQSISDLKSLATALLETIHEKNMVIQHQRQTNKILGNRVAELEKKLRTLEVSGLWSLPGGKDTILFSDPTLPSGQRSRS PLLKFVEQPTENKADPKDGEAQKQEEDESCAAAEALTAPEDAGRPAVNSPANQSRGNQCKLFHPSLPQLPSEEEVNSLGREIIKLTKEQA |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_ZFYVE28_ENST00000290974_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_1566nt ATGATGAACAGGTTCCGAAAGTGGCTCTACAAACCCAAGTACCTGGTGTGTAAGAGGAAGCTGGAGAGTAAGAAGGAAGCCCTGCTGATC CTCTCCAAGGAGCTGGACACCTGTCAACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAG AAGAAGTACCGAGAGCTGATTGATGGAGATCCATCACTTCCTCCTGAAAAAAGGAAACAGGCTAATCTTGCACAACTATTGAGAGATTCT CAGGACCGAAATAAACATCTGGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGATG ACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAG CGAGCTAAGGAACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGAACGGTCTTCCTAC CAGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATG GAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTG GAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGCTA TCTGAGGATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCAC GAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGAATCGGGTGGCTGAGCTGGAAAAAAAATTAAGAACTCTG GAAGTTTCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACCATACTGTTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCC CCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGT GCCGCTGCTGAGGCGTTGACAGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAG CTCTTTCATCCTTCATTACCCCAGTTACCTTCTGAGGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGCA GCTGCAGAACTGGAAGAGGTCAGAAGAGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG GGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCA >In-frame_ZFYVE28_ENST00000511071_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_1566nt ATGATGAACAGGTTCCGAAAGTGGCTCTACAAACCCAAGTACCTGGTGTGTAAGAGGAAGCTGGAGAGTAAGAAGGAAGCCCTGCTGATC CTCTCCAAGGAGCTGGACACCTGTCAACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAG AAGAAGTACCGAGAGCTGATTGATGGAGATCCATCACTTCCTCCTGAAAAAAGGAAACAGGCTAATCTTGCACAACTATTGAGAGATTCT CAGGACCGAAATAAACATCTGGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGATG ACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAG CGAGCTAAGGAACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGAACGGTCTTCCTAC CAGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATG GAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTG GAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGCTA TCTGAGGATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCAC GAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGAATCGGGTGGCTGAGCTGGAAAAAAAATTAAGAACTCTG GAAGTTTCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACCATACTGTTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCC CCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGT GCCGCTGCTGAGGCGTTGACAGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAG CTCTTTCATCCTTCATTACCCCAGTTACCTTCTGAGGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGCA GCTGCAGAACTGGAAGAGGTCAGAAGAGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG GGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCA >In-frame_ZFYVE28_ENST00000509171_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_1566nt ATGATGAACAGGTTCCGAAAGTGGCTCTACAAACCCAAGTACCTGGTGTGTAAGAGGAAGCTGGAGAGTAAGAAGGAAGCCCTGCTGATC CTCTCCAAGGAGCTGGACACCTGTCAACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAG AAGAAGTACCGAGAGCTGATTGATGGAGATCCATCACTTCCTCCTGAAAAAAGGAAACAGGCTAATCTTGCACAACTATTGAGAGATTCT CAGGACCGAAATAAACATCTGGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGATG ACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAG CGAGCTAAGGAACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGAACGGTCTTCCTAC CAGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATG GAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTG GAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGCTA TCTGAGGATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCAC GAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGAATCGGGTGGCTGAGCTGGAAAAAAAATTAAGAACTCTG GAAGTTTCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACCATACTGTTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCC CCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGT GCCGCTGCTGAGGCGTTGACAGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAG CTCTTTCATCCTTCATTACCCCAGTTACCTTCTGAGGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGCA GCTGCAGAACTGGAAGAGGTCAGAAGAGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG GGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCA >In-frame_ZFYVE28_ENST00000503000_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_1566nt ATGATGAACAGGTTCCGAAAGTGGCTCTACAAACCCAAGTACCTGGTGTGTAAGAGGAAGCTGGAGAGTAAGAAGGAAGCCCTGCTGATC CTCTCCAAGGAGCTGGACACCTGTCAACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAG AAGAAGTACCGAGAGCTGATTGATGGAGATCCATCACTTCCTCCTGAAAAAAGGAAACAGGCTAATCTTGCACAACTATTGAGAGATTCT CAGGACCGAAATAAACATCTGGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGATG ACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAG CGAGCTAAGGAACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGAACGGTCTTCCTAC CAGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATG GAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTG GAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGCTA TCTGAGGATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCAC GAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGAATCGGGTGGCTGAGCTGGAAAAAAAATTAAGAACTCTG GAAGTTTCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACCATACTGTTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCC CCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGT GCCGCTGCTGAGGCGTTGACAGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAG CTCTTTCATCCTTCATTACCCCAGTTACCTTCTGAGGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGCA GCTGCAGAACTGGAAGAGGTCAGAAGAGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAG GGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_ZFYVE28_ENST00000290974_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_4178nt GTGCGGCGCGGGGCGGCCGTGACCAGCGGAGCGCTGGGTGTCAGTGAGCAGCGAGGAGCCGCGCGCCCCCGTGCCCGCGTCTGTCCGTGC GCCCGAGCGCCCACTCCCGGGTCTGAGGTCTGCCCGGCGCGCCGCTTGCAGAGCATACTCAGGGCCGCGCACCTGCCCCGCGCACCTGCC CGCCGCCCGCTCGGCGCTCCGGGCTTCGCTAGCCAGCCTCCCTGCGACAGCGCGGGGGCTCCGGCCGTGCCTCCGCGTCCGCCCCGCGCC TCAGCCGGGCCCGGGCGCAGCGCTGCGGAGGGCGAGGGCCGCCCGGAGTCCGGCCAGGGCCGGCGCGGCGATGATGAACAGGTTCCGAAA GTGGCTCTACAAACCCAAGTACCTGGTGTGTAAGAGGAAGCTGGAGAGTAAGAAGGAAGCCCTGCTGATCCTCTCCAAGGAGCTGGACAC CTGTCAACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTACCGAGAGCTGAT TGATGGAGATCCATCACTTCCTCCTGAAAAAAGGAAACAGGCTAATCTTGCACAACTATTGAGAGATTCTCAGGACCGAAATAAACATCT GGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGATGACGATTGCCAAACAAAGGCT CGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAAGGAACAGATTGA GTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGAACGGTCTTCCTACCAGGACAAAGTGGAGAGGCT CAACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATGGAGAACAGGTACCTTCAAGA GAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTGGAGAGACGGAAAAACTCGAA GGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGCTATCTGAGGATCATGGATGCAG CCTCCCAGCTACTCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCA GCACCAGAGGCAAACCAACAAAATCCTAGGGAATCGGGTGGCTGAGCTGGAAAAAAAATTAAGAACTCTGGAAGTTTCTGGTTTGTGGAG TCTTCCAGGGGGCAAGGACACCATACTGTTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTCGA GCAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGTGCCGCTGCTGAGGCGTTGAC AGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTTCATTACC CCAGTTACCTTCTGAGGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGT CAGAAGAGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCA CCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAG CACCGTGAAAACCTGAAGGGGAGAGGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGC GCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGC CAGTACAGTTTGATTTATTAAATGTAGGTCCTCAAGCTTCTCAGTGTCATCTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGG CCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTTTTGTTTTATCAGAGATAAGATGTTTTTGTATTA GCATTTAATGTTGTCAATCAAAATTATGGGAAGAGCTAGAAACTGATGGGGTTTTTAATCAGGTCCCCATCTTGGTCAAGGTTAGGCAGC TGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCATG GGTGTGCTTGGCATTGTGCCCACAGCACTGCTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTT CTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCTGAGTGCCAGAGCTGGAGTTTTCTAGCTTGTAAATCTGGAGAATTAACTGA TCTGAAGTGACTGGGAGGGGTGAGCATAAAAGCCGGGGAACAGGACTCCCAGTGGTGGTCTGGTTTTTTTTGTGAGATGAGATGAGAGCT ACCACCTGGAAATGCTCATTCTCTGCATTCAGCCTGTCTCACATACAGGATTGTATGGCCATTTCAGGTTTGGGAAAGATCTACCTGCTG GGAGCCAGTCTAGTTTCCTGCACCACCTGGAACTTCCAAACCCTTCACTCCTTCAACAGAATGTTGAGGCTGCCTCATTTGTGCCACCAA GTACGGGAATCTTAAAGACAGAAACAGAGCTCATGACCTTTTATGGGAAAGAGAGAGGAAAACAAAACAACTTCACAACAGCATGGCAAG GGGGGATGTGGAACCAAGGACATGATACAGGGATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAAATGAG CTTTTCTAGTTGGCATCCGGCACTGCAGAAAACTAAAAGTCATCCAGCCATAGCTTTTTCCTTCCCTGGAAAGCCTGAGACTAGATCCCA AAGCTCAGAATGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCA GTGAAAATGCATCCTAAAAATTCAATGTTTATACCAGGCTCATGACACTAAGATGTGACATCTGGACACGAGGGGTCAGCCACGTGGATA CATCCCTCCCAGATTGCATCTCCAGGAATCACTCTGCTAGCAGAATGGGCGCCCCATCCCTTACTATGCTGCTCCTCCTCAAAGTGCAGC CCAGAAGGACCCAGGCCTTTGATGCACATTGGGTGGGTCTCCCACTACTTTAGTTGAAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGC TTCTGGTGAGAAGGACATCCCATTGACCCCTGGCCACCAGGTCCAGTATTCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCACCA GGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGCTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATCATTCTTCCTG CTGTACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAGCCAAGTTTAATAAT AATAAAAGGAAAAATCTCAGCCTGCAGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTG AAAAGCAGGGCTCGTAATAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAATCTAGGGTGCAGGGCAGGG AGCAGGAGTCATAAGGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGGTGAAATGAGAGCCAGTAAGTTA GTTGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTC >In-frame_ZFYVE28_ENST00000511071_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_4151nt GGAGCGCTGGGTGTCAGTGAGCAGCGAGGAGCCGCGCGCCCCCGTGCCCGCGTCTGTCCGTGCGCCCGAGCGCCCACTCCCGGGTCTGAG GTCTGCCCGGCGCGCCGCTTGCAGAGCATACTCAGGGCCGCGCACCTGCCCCGCGCACCTGCCCGCCGCCCGCTCGGCGCTCCGGGCTTC GCTAGCCAGCCTCCCTGCGACAGCGCGGGGGCTCCGGCCGTGCCTCCGCGTCCGCCCCGCGCCTCAGCCGGGCCCGGGCGCAGCGCTGCG GAGGGCGAGGGCCGCCCGGAGTCCGGCCAGGGCCGGCGCGGCGATGATGAACAGGTTCCGAAAGTGGCTCTACAAACCCAAGTACCTGGT GTGTAAGAGGAAGCTGGAGAGTAAGAAGGAAGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCTGTCAACAGGAAAGGGACCAGTACAA ACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTACCGAGAGCTGATTGATGGAGATCCATCACTTCCTCCTGA AAAAAGGAAACAGGCTAATCTTGCACAACTATTGAGAGATTCTCAGGACCGAAATAAACATCTGGGAGAAGAAATTAAAGAACTTCAGCA AAGGCTTGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACA CTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAAGGAACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTC TGTGGACGAGCTTCAGGATGTTAAAGAAGAACGGTCTTCCTACCAGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATATCCTGAG TGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTCCATGAAGAGGT CAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTGGAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGC TCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGCTATCTGAGGATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCCATTTC TGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCT AGGGAATCGGGTGGCTGAGCTGGAAAAAAAATTAAGAACTCTGGAAGTTTCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACCATACT GTTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCC CAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGTGCCGCTGCTGAGGCGTTGACAGCGCCTGAGGATGCTGGGAGGCCCGC TGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTTCATTACCCCAGTTACCTTCTGAGGAAGAAGTAAA CAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTCAGAAGAGAGAGTCCCATAGAAGGTCA GAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCC AGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGG ATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACC TCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTTGATTTATTAAATGTAG GTCCTCAAGCTTCTCAGTGTCATCTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCT GGTTTTCAGCATCCGTCTTTCTGTCAGCTTTTGTTTTATCAGAGATAAGATGTTTTTGTATTAGCATTTAATGTTGTCAATCAAAATTAT GGGAAGAGCTAGAAACTGATGGGGTTTTTAATCAGGTCCCCATCTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAA CGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGCATTGTGCCCACAGCA CTGCTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTG AGGCCTGTGTGCTGAGTGCCAGAGCTGGAGTTTTCTAGCTTGTAAATCTGGAGAATTAACTGATCTGAAGTGACTGGGAGGGGTGAGCAT AAAAGCCGGGGAACAGGACTCCCAGTGGTGGTCTGGTTTTTTTTGTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCA TTCAGCCTGTCTCACATACAGGATTGTATGGCCATTTCAGGTTTGGGAAAGATCTACCTGCTGGGAGCCAGTCTAGTTTCCTGCACCACC TGGAACTTCCAAACCCTTCACTCCTTCAACAGAATGTTGAGGCTGCCTCATTTGTGCCACCAAGTACGGGAATCTTAAAGACAGAAACAG AGCTCATGACCTTTTATGGGAAAGAGAGAGGAAAACAAAACAACTTCACAACAGCATGGCAAGGGGGGATGTGGAACCAAGGACATGATA CAGGGATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAAATGAGCTTTTCTAGTTGGCATCCGGCACTGCA GAAAACTAAAAGTCATCCAGCCATAGCTTTTTCCTTCCCTGGAAAGCCTGAGACTAGATCCCAAAGCTCAGAATGCCTCTGAGAACCAGA ATCACTCCTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAAAAATTCAATG TTTATACCAGGCTCATGACACTAAGATGTGACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATCTCCAGGA ATCACTCTGCTAGCAGAATGGGCGCCCCATCCCTTACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCCAGGCCTTTGATGCAC ATTGGGTGGGTCTCCCACTACTTTAGTTGAAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGAC CCCTGGCCACCAGGTCCAGTATTCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAG GGAGGTTGCTCCCGCAGCTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATCATTCTTCCTGCTGTACTGGGCCTTAACTGCCTGCAAA TGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAGCCAAGTTTAATAATAATAAAAGGAAAAATCTCAGCCTGCAG AACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAG CACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAATCTAGGGTGCAGGGCAGGGAGCAGGAGTCATAAGGAGTGATAACCT AAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGGTGAAATGAGAGCCAGTAAGTTAGTTGATCCTGTCACAGATATAACCCTG ATAACACCCCATAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTTCTGTTCCACAGACATTAAAGGGGCT >In-frame_ZFYVE28_ENST00000509171_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_4166nt GCGGCCGTGACCAGCGGAGCGCTGGGTGTCAGTGAGCAGCGAGGAGCCGCGCGCCCCCGTGCCCGCGTCTGTCCGTGCGCCCGAGCGCCC ACTCCCGGGTCTGAGGTCTGCCCGGCGCGCCGCTTGCAGAGCATACTCAGGGCCGCGCACCTGCCCCGCGCACCTGCCCGCCGCCCGCTC GGCGCTCCGGGCTTCGCTAGCCAGCCTCCCTGCGACAGCGCGGGGGCTCCGGCCGTGCCTCCGCGTCCGCCCCGCGCCTCAGCCGGGCCC GGGCGCAGCGCTGCGGAGGGCGAGGGCCGCCCGGAGTCCGGCCAGGGCCGGCGCGGCGATGATGAACAGGTTCCGAAAGTGGCTCTACAA ACCCAAGTACCTGGTGTGTAAGAGGAAGCTGGAGAGTAAGAAGGAAGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCTGTCAACAGGA AAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCGCCACCAGTCACTGAAGAAGAAGTACCGAGAGCTGATTGATGGAGATCC ATCACTTCCTCCTGAAAAAAGGAAACAGGCTAATCTTGCACAACTATTGAGAGATTCTCAGGACCGAAATAAACATCTGGGAGAAGAAAT TAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAACAAGCTCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGC AATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAGCTAAGGAACAGATTGAGTCTCTGGAGCA CGACCTGCAGGCTTCTGTGGACGAGCTTCAGGATGTTAAAGAAGAACGGTCTTCCTACCAGGACAAAGTGGAGAGGCTCAACCAGGAGCT GAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGTGGACGCCCTGTGTATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCA ACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAAATACAAGAATGCTCTGGAGAGACGGAAAAACTCGAAGGGCCAGGGTAA ATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCAAGTTCAGGATCTGCTATCTGAGGATCATGGATGCAGCCTCCCAGCTAC TCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCTGTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCA AACCAACAAAATCCTAGGGAATCGGGTGGCTGAGCTGGAAAAAAAATTAAGAACTCTGGAAGTTTCTGGTTTGTGGAGTCTTCCAGGGGG CAAGGACACCATACTGTTCAGCGACCCCACTCTTCCTAGTGGACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTCGAGCAGCCCACTGA GAACAAAGCAGATCCCAAGGATGGGGAGGCTCAGAAGCAAGAAGAAGATGAAAGTTGTGCCGCTGCTGAGGCGTTGACAGCGCCTGAGGA TGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCGCGGGAACCAATGCAAGCTCTTTCATCCTTCATTACCCCAGTTACCTTC TGAGGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACTGACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTCAGAAGAGAGAG TCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCCAGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTT CGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGACGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAAC CTGAAGGGGAGAGGGATCTGACACAATGACACATTGAAAGCCCCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCC TTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCACTGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTTG ATTTATTAAATGTAGGTCCTCAAGCTTCTCAGTGTCATCTCTTTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGT GTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAGCTTTTGTTTTATCAGAGATAAGATGTTTTTGTATTAGCATTTAATGTT GTCAATCAAAATTATGGGAAGAGCTAGAAACTGATGGGGTTTTTAATCAGGTCCCCATCTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGG TATAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACCCCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGC ATTGTGCCCACAGCACTGCTGTCGTGGTACAGACTGGCAGTTGGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCTGGGTTGAAAT CCACAGCCCCGGTTGAGGCCTGTGTGCTGAGTGCCAGAGCTGGAGTTTTCTAGCTTGTAAATCTGGAGAATTAACTGATCTGAAGTGACT GGGAGGGGTGAGCATAAAAGCCGGGGAACAGGACTCCCAGTGGTGGTCTGGTTTTTTTTGTGAGATGAGATGAGAGCTACCACCTGGAAA TGCTCATTCTCTGCATTCAGCCTGTCTCACATACAGGATTGTATGGCCATTTCAGGTTTGGGAAAGATCTACCTGCTGGGAGCCAGTCTA GTTTCCTGCACCACCTGGAACTTCCAAACCCTTCACTCCTTCAACAGAATGTTGAGGCTGCCTCATTTGTGCCACCAAGTACGGGAATCT TAAAGACAGAAACAGAGCTCATGACCTTTTATGGGAAAGAGAGAGGAAAACAAAACAACTTCACAACAGCATGGCAAGGGGGGATGTGGA ACCAAGGACATGATACAGGGATGGGAAAGGAGGGCATGCTCAATTCTAGCTGGTTCTTTCCTTTCAGATAAAAATGAGCTTTTCTAGTTG GCATCCGGCACTGCAGAAAACTAAAAGTCATCCAGCCATAGCTTTTTCCTTCCCTGGAAAGCCTGAGACTAGATCCCAAAGCTCAGAATG CCTCTGAGAACCAGAATCACTCCTTTGAGAGGCGCTCCTTGCAGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCAT CCTAAAAATTCAATGTTTATACCAGGCTCATGACACTAAGATGTGACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAG ATTGCATCTCCAGGAATCACTCTGCTAGCAGAATGGGCGCCCCATCCCTTACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCC AGGCCTTTGATGCACATTGGGTGGGTCTCCCACTACTTTAGTTGAAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAA GGACATCCCATTGACCCCTGGCCACCAGGTCCAGTATTCCATCCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCACCAGGCCCACCCCCA CAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGCTGGAGGGCTTGCACAGACCAGCAGTCACAGAAATCATTCTTCCTGCTGTACTGGGCC TTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCAGAGCCACCGAAGGAAAACACAGCCAAGTTTAATAATAATAAAAGGAAA AATCTCAGCCTGCAGAACTCTGGTTTTGACCCACCATCGGCCAGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCT CGTAATAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTGCAGTGAGTCCCAGAGAATCTAGGGTGCAGGGCAGGGAGCAGGAGTCAT AAGGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGTCTTATGTTATCAGGTGAAATGAGAGCCAGTAAGTTAGTTGATCCTGTC ACAGATATAACCCTGATAACACCCCATAGATACGCGACACGTGTGTCCTGCCCCTGCTTTCCCCATCCAACATGGTTCTTCTGTTCCACA >In-frame_ZFYVE28_ENST00000503000_chr4_2420012_-_CCDC149_ENST00000504487_chr4_24878319_-_4124nt GGAGCCGCGCGCCCCCGTGCCCGCGTCTGTCCGTGCGCCCGAGCGCCCACTCCCGGGTCTGAGGTCTGCCCGGCGCGCCGCTTGCAGAGC ATACTCAGGGCCGCGCACCTGCCCCGCGCACCTGCCCGCCGCCCGCTCGGCGCTCCGGGCTTCGCTAGCCAGCCTCCCTGCGACAGCGCG GGGGCTCCGGCCGTGCCTCCGCGTCCGCCCCGCGCCTCAGCCGGGCCCGGGCGCAGCGCTGCGGAGGGCGAGGGCCGCCCGGAGTCCGGC CAGGGCCGGCGCGGCGATGATGAACAGGTTCCGAAAGTGGCTCTACAAACCCAAGTACCTGGTGTGTAAGAGGAAGCTGGAGAGTAAGAA GGAAGCCCTGCTGATCCTCTCCAAGGAGCTGGACACCTGTCAACAGGAAAGGGACCAGTACAAACTCATGGCCAATCAGCTCCGGGAGCG CCACCAGTCACTGAAGAAGAAGTACCGAGAGCTGATTGATGGAGATCCATCACTTCCTCCTGAAAAAAGGAAACAGGCTAATCTTGCACA ACTATTGAGAGATTCTCAGGACCGAAATAAACATCTGGGAGAAGAAATTAAAGAACTTCAGCAAAGGCTTGGAGAAGTCCAGGGCGACAA CAAGCTCTTGAGGATGACGATTGCCAAACAAAGGCTCGGAGACGAAGCAATCGGCGTGCGACACTTTGCAGCCCATGAGCGTGAAGACTT GGTGCAGCAGCTAGAGCGAGCTAAGGAACAGATTGAGTCTCTGGAGCACGACCTGCAGGCTTCTGTGGACGAGCTTCAGGATGTTAAAGA AGAACGGTCTTCCTACCAGGACAAAGTGGAGAGGCTCAACCAGGAGCTGAACCATATCCTGAGTGGGCACGAGAACCGCATCATTGACGT GGACGCCCTGTGTATGGAGAACAGGTACCTTCAAGAGAGATTAAAGCAACTCCATGAAGAGGTCAACCTCTTGAAATCAAACATTGCCAA ATACAAGAATGCTCTGGAGAGACGGAAAAACTCGAAGGGCCAGGGTAAATCCAGCAGCAGTGCTCTGACAGGAGTCCTGTCTGCAAAGCA AGTTCAGGATCTGCTATCTGAGGATCATGGATGCAGCCTCCCAGCTACTCCGCAGTCCATTTCTGACCTGAAATCTCTGGCAACAGCCCT GTTGGAAACAATCCACGAGAAAAACATGGTCATTCAGCACCAGAGGCAAACCAACAAAATCCTAGGGAATCGGGTGGCTGAGCTGGAAAA AAAATTAAGAACTCTGGAAGTTTCTGGTTTGTGGAGTCTTCCAGGGGGCAAGGACACCATACTGTTCAGCGACCCCACTCTTCCTAGTGG ACAGAGGTCGAGATCCCCACTGCTGAAGTTTGTCGAGCAGCCCACTGAGAACAAAGCAGATCCCAAGGATGGGGAGGCTCAGAAGCAAGA AGAAGATGAAAGTTGTGCCGCTGCTGAGGCGTTGACAGCGCCTGAGGATGCTGGGAGGCCCGCTGTCAACTCCCCAGCAAATCAGAGCCG CGGGAACCAATGCAAGCTCTTTCATCCTTCATTACCCCAGTTACCTTCTGAGGAAGAAGTAAACAGCCTTGGGAGGGAAATAATTAAACT GACAAAGGAACAGGCAGCTGCAGAACTGGAAGAGGTCAGAAGAGAGAGTCCCATAGAAGGTCAGAGGAGTGAGACGGGGCCAGCCCCGCC AGGCCTGGCCATCCAGGGGGAGCTCCCTAAATCTCACCTGGACTCCTTCGAGGCCAGCCGGCCAGCAGCCAAAGCTTCCACACCGGAAGA CGGCAAAGGGATCCCAGAGGGCGGAGGCATGAGGAGCACCGTGAAAACCTGAAGGGGAGAGGGATCTGACACAATGACACATTGAAAGCC CCAGAGAGGGTCAAGAATGAAGCATCGGAATGGTGCGCTCACGTCGCCTTCTCCTGAAATACCTCCGAGTCTGCAAGTGAGAAAACGCAC TGATCCTGTTGCAAACTGTGAATATTCTGATGATGCCAGTACAGTTTGATTTATTAAATGTAGGTCCTCAAGCTTCTCAGTGTCATCTCT TTTCTGCCAGAGAGTGCTACTGTGAACAGGGCCAGGCCCAGGAATCGTGTCCACCATATGGCTGGTTTTCAGCATCCGTCTTTCTGTCAG CTTTTGTTTTATCAGAGATAAGATGTTTTTGTATTAGCATTTAATGTTGTCAATCAAAATTATGGGAAGAGCTAGAAACTGATGGGGTTT TTAATCAGGTCCCCATCTTGGTCAAGGTTAGGCAGCTGGAGAGGAAGGTATAATTGAGCAAAACGTGTCCAGAGGACCCATGGCTGCACC CCATCAAGTCAGGGCCCAGGAGGACTGCCTGGCATGGGTGTGCTTGGCATTGTGCCCACAGCACTGCTGTCGTGGTACAGACTGGCAGTT GGAAGGGGCCTTAAGCCGGCTGAGAAGTTTGGGCTTCTGGGTTGAAATCCACAGCCCCGGTTGAGGCCTGTGTGCTGAGTGCCAGAGCTG GAGTTTTCTAGCTTGTAAATCTGGAGAATTAACTGATCTGAAGTGACTGGGAGGGGTGAGCATAAAAGCCGGGGAACAGGACTCCCAGTG GTGGTCTGGTTTTTTTTGTGAGATGAGATGAGAGCTACCACCTGGAAATGCTCATTCTCTGCATTCAGCCTGTCTCACATACAGGATTGT ATGGCCATTTCAGGTTTGGGAAAGATCTACCTGCTGGGAGCCAGTCTAGTTTCCTGCACCACCTGGAACTTCCAAACCCTTCACTCCTTC AACAGAATGTTGAGGCTGCCTCATTTGTGCCACCAAGTACGGGAATCTTAAAGACAGAAACAGAGCTCATGACCTTTTATGGGAAAGAGA GAGGAAAACAAAACAACTTCACAACAGCATGGCAAGGGGGGATGTGGAACCAAGGACATGATACAGGGATGGGAAAGGAGGGCATGCTCA ATTCTAGCTGGTTCTTTCCTTTCAGATAAAAATGAGCTTTTCTAGTTGGCATCCGGCACTGCAGAAAACTAAAAGTCATCCAGCCATAGC TTTTTCCTTCCCTGGAAAGCCTGAGACTAGATCCCAAAGCTCAGAATGCCTCTGAGAACCAGAATCACTCCTTTGAGAGGCGCTCCTTGC AGGAAAAAGAGAGGCTCCCAGAGTGGTAGCCTCTCAGTGAAAATGCATCCTAAAAATTCAATGTTTATACCAGGCTCATGACACTAAGAT GTGACATCTGGACACGAGGGGTCAGCCACGTGGATACATCCCTCCCAGATTGCATCTCCAGGAATCACTCTGCTAGCAGAATGGGCGCCC CATCCCTTACTATGCTGCTCCTCCTCAAAGTGCAGCCCAGAAGGACCCAGGCCTTTGATGCACATTGGGTGGGTCTCCCACTACTTTAGT TGAAATGGGAGCATGCTGGAGTCGGCGTTCTGTTGCTTCTGGTGAGAAGGACATCCCATTGACCCCTGGCCACCAGGTCCAGTATTCCAT CCTTCCTTCTGTCCCAGCCTATCGCCCTCCCCACCAGGCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGCTGGAGGGCT TGCACAGACCAGCAGTCACAGAAATCATTCTTCCTGCTGTACTGGGCCTTAACTGCCTGCAAATGTCCAGCACTACTGCATAGGATGCCA GAGCCACCGAAGGAAAACACAGCCAAGTTTAATAATAATAAAAGGAAAAATCTCAGCCTGCAGAACTCTGGTTTTGACCCACCATCGGCC AGATGCACATCTTCAGGGCCTGTTGAGCACCTTCTGAAAAGCAGGGCTCGTAATAGACTCCAGCACATTCCATCAGAGTCAGGAAAACTG CAGTGAGTCCCAGAGAATCTAGGGTGCAGGGCAGGGAGCAGGAGTCATAAGGAGTGATAACCTAAACTGTGTGTAGTCAGCGGGGAGGGT CTTATGTTATCAGGTGAAATGAGAGCCAGTAAGTTAGTTGATCCTGTCACAGATATAACCCTGATAACACCCCATAGATACGCGACACGT |
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FusionGenePPI for ZFYVE28_CCDC149 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| ZFYVE28 | EGF, RAB5A, RAB4A, RAB7A, EGFR, PRNP | CCDC149 | PRNP, APP |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZFYVE28_CCDC149 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZFYVE28_CCDC149 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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