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Fusion gene ID: 42702 |
FusionGeneSummary for ZDHHC2_FGD6 |
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Fusion gene information | Fusion gene name: ZDHHC2_FGD6 | Fusion gene ID: 42702 | Hgene | Tgene | Gene symbol | ZDHHC2 | FGD6 | Gene ID | 51201 | 55785 |
Gene name | zinc finger DHHC-type containing 2 | FYVE, RhoGEF and PH domain containing 6 | |
Synonyms | DHHC2|ZNF372 | ZFYVE24 | |
Cytomap | 8p22 | 12q22 | |
Type of gene | protein-coding | protein-coding | |
Description | palmitoyltransferase ZDHHC2DHHC-2reamrecreduced expression associated with metastasis proteinreduced expression in cancer proteintestis tissue sperm-binding protein Li 56ezinc finger DHHC domain-containing protein 2zinc finger protein 372zinc fin | FYVE, RhoGEF and PH domain-containing protein 6zinc finger FYVE domain-containing protein 24 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q9UIJ5 | Q6ZV73 | |
Ensembl transtripts involved in fusion gene | ENST00000262096, | ENST00000343958, ENST00000546711, ENST00000549499, ENST00000550368, | |
Fusion gene scores | * DoF score | 4 X 1 X 3=12 | 4 X 4 X 2=32 |
# samples | 3 | 4 | |
** MAII score | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(4/32*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ZDHHC2 [Title/Abstract] AND FGD6 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ZDHHC2 | GO:0018345 | protein palmitoylation | 23034182 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SARC | TCGA-DX-AB36-01A | ZDHHC2 | chr8 | 17014362 | + | FGD6 | chr12 | 95479684 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000262096 | ENST00000343958 | ZDHHC2 | chr8 | 17014362 | + | FGD6 | chr12 | 95479684 | - |
Frame-shift | ENST00000262096 | ENST00000546711 | ZDHHC2 | chr8 | 17014362 | + | FGD6 | chr12 | 95479684 | - |
5CDS-intron | ENST00000262096 | ENST00000549499 | ZDHHC2 | chr8 | 17014362 | + | FGD6 | chr12 | 95479684 | - |
5CDS-intron | ENST00000262096 | ENST00000550368 | ZDHHC2 | chr8 | 17014362 | + | FGD6 | chr12 | 95479684 | - |
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FusionProtFeatures for ZDHHC2_FGD6 |
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Hgene | Tgene |
ZDHHC2 | FGD6 |
Palmitoyltransferase specific for GAP43 and DLG4/PSD95.{ECO:0000250}. | May activate CDC42, a member of the Ras-like family ofRho- and Rac proteins, by exchanging bound GDP for free GTP. Mayplay a role in regulating the actin cytoskeleton and cell shape(By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ZDHHC2_FGD6 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for ZDHHC2_FGD6 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZDHHC2 | MSX2, MAFB | FGD6 | GRB2, NPM1, DBNL, GBA, PDGFRB, CTR9, PLK2, CCDC102B, KCTD3, KIF13B, CGN, ZBTB21, KSR1, CBY1, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZDHHC2_FGD6 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZDHHC2_FGD6 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ZDHHC2 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Hgene | ZDHHC2 | C0023903 | Liver neoplasms | 1 | CTD_human |
Hgene | ZDHHC2 | C0043094 | Weight Gain | 1 | CTD_human |
Tgene | FGD6 | C0345967 | Malignant mesothelioma | 1 | CTD_human |
Tgene | FGD6 | C2237660 | exudative macular degeneration | 1 | CTD_human |