![]() |
||||||
|
![]() | |
![]() | |
![]() | |
![]() | |
![]() | |
![]() |
Fusion gene ID: 42625 |
FusionGeneSummary for ZCCHC14_ZCCHC14 |
![]() |
Fusion gene information | Fusion gene name: ZCCHC14_ZCCHC14 | Fusion gene ID: 42625 | Hgene | Tgene | Gene symbol | ZCCHC14 | ZCCHC14 | Gene ID | 23174 | 23174 |
Gene name | zinc finger CCHC-type containing 14 | zinc finger CCHC-type containing 14 | |
Synonyms | BDG-29|BDG29 | BDG-29|BDG29 | |
Cytomap | 16q24.2 | 16q24.2 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger CCHC domain-containing protein 14zinc finger, CCHC domain containing 14 | zinc finger CCHC domain-containing protein 14zinc finger, CCHC domain containing 14 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q8WYQ9 | Q8WYQ9 | |
Ensembl transtripts involved in fusion gene | ENST00000268616, | ENST00000268616, | |
Fusion gene scores | * DoF score | 5 X 3 X 5=75 | 2 X 2 X 1=4 |
# samples | 5 | 3 | |
** MAII score | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/4*10)=2.90689059560852 | |
Context | PubMed: ZCCHC14 [Title/Abstract] AND ZCCHC14 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
![]() |
Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | AL044069 | ZCCHC14 | chr16 | 87445203 | + | ZCCHC14 | chr16 | 87443934 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000268616 | ENST00000268616 | ZCCHC14 | chr16 | 87445203 | + | ZCCHC14 | chr16 | 87443934 | - |
Top |
FusionProtFeatures for ZCCHC14_ZCCHC14 |
![]() |
Hgene | Tgene |
ZCCHC14 | ZCCHC14 |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for ZCCHC14_ZCCHC14 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
Top |
FusionGenePPI for ZCCHC14_ZCCHC14 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
![]() |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for ZCCHC14_ZCCHC14 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for ZCCHC14_ZCCHC14 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ZCCHC14 | C0001973 | Alcoholic Intoxication, Chronic | 1 | PSYGENET |
Tgene | ZCCHC14 | C0001973 | Alcoholic Intoxication, Chronic | 1 | PSYGENET |