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Fusion gene ID: 42518 |
FusionGeneSummary for ZBTB48_ESPN |
Fusion gene summary |
Fusion gene information | Fusion gene name: ZBTB48_ESPN | Fusion gene ID: 42518 | Hgene | Tgene | Gene symbol | ZBTB48 | ESPN | Gene ID | 3104 | 83715 |
Gene name | zinc finger and BTB domain containing 48 | espin | |
Synonyms | HKR3|TZAP|ZNF855|pp9964 | DFNB36|LP2654 | |
Cytomap | 1p36.31 | 1p36.31 | |
Type of gene | protein-coding | protein-coding | |
Description | telomere zinc finger-associated proteinGLI-Kruppel family member HKR3krueppel-related zinc finger protein 3telomeric zinc finger-associated proteinzinc finger and BTB domain-containing protein 48zinc finger protein 855 | espinautosomal recessive deafness type 36 proteinectoplasmic specialization protein | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | P10074 | B1AK53 | |
Ensembl transtripts involved in fusion gene | ENST00000377674, | ENST00000377828, ENST00000461727, ENST00000475228, ENST00000416731, | |
Fusion gene scores | * DoF score | 3 X 4 X 3=36 | 3 X 2 X 2=12 |
# samples | 3 | 3 | |
** MAII score | log2(3/36*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: ZBTB48 [Title/Abstract] AND ESPN [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | GBM | TCGA-14-0786-01B | ZBTB48 | chr1 | 6647351 | + | ESPN | chr1 | 6488286 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000377674 | ENST00000377828 | ZBTB48 | chr1 | 6647351 | + | ESPN | chr1 | 6488286 | + |
5CDS-intron | ENST00000377674 | ENST00000461727 | ZBTB48 | chr1 | 6647351 | + | ESPN | chr1 | 6488286 | + |
5CDS-intron | ENST00000377674 | ENST00000475228 | ZBTB48 | chr1 | 6647351 | + | ESPN | chr1 | 6488286 | + |
5CDS-intron | ENST00000377674 | ENST00000416731 | ZBTB48 | chr1 | 6647351 | + | ESPN | chr1 | 6488286 | + |
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FusionProtFeatures for ZBTB48_ESPN |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ZBTB48 | ESPN |
Telomere-binding protein that acts as a regulator oftelomere length (PubMed:28500257, PubMed:28082411). Directly bindsthe telomeric double-stranded 5'-TTAGGG-3' repeat(PubMed:28500257, PubMed:28082411). Preferentially binds totelomeres that have a low concentration of shelterin complex andacts as a regulator of telomere length by initiating telomeretrimming, a process that prevents the accumulation of aberrantlylong telomeres (PubMed:28082411). Also acts as a transcriptionregulator that binds to promoter regions (PubMed:7969177,PubMed:24382891, PubMed:28500257). Regulates expression of a smallsubset of genes, including MTFP1 (PubMed:28500257). Regulatesexpression the J and/or S elements in MHC II promoter(PubMed:7969177). Acts as a negative regulator of cellproliferation by specifically activating expression of ARF, atumor suppressor isoform of CDKN2A (PubMed:24382891).{ECO:0000269|PubMed:24382891, ECO:0000269|PubMed:28082411,ECO:0000269|PubMed:28500257, ECO:0000269|PubMed:7969177}. | Multifunctional actin-bundling protein. Plays a majorrole in regulating the organization, dimension, dynamics andsignaling capacities of the actin filament-rich microvilli in themechanosensory and chemosensory cells. Required for the assemblyand stabilization of the stereociliary parallel actin bundles.Plays a crucial role in the formation and maintenance of inner earhair cell stereocilia. Involved in the elongation of actin instereocilia. In extrastriolar hair cells, required for targetingMYO3B to stereocilia tips, and for regulation of stereociliadiameter and staircase formation. {ECO:0000250|UniProtKB:Q9ET47}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 26_89 | 408 | 689 | Domain | BTB |
Hgene | ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 291_313 | 408 | 689 | Zinc finger | C2H2-type 1 |
Hgene | ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 319_341 | 408 | 689 | Zinc finger | C2H2-type 2%3B degenerate |
Hgene | ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 350_372 | 408 | 689 | Zinc finger | C2H2-type 3 |
Hgene | ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 378_401 | 408 | 689 | Zinc finger | C2H2-type 4 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 756_830 | 98 | 855 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 756_830 | 0 | 289 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 756_830 | -73 | 289 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 428_730 | 98 | 855 | Compositional bias | Note=Pro-rich |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 768_825 | 98 | 855 | Compositional bias | Note=Glu-rich |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 428_730 | 0 | 289 | Compositional bias | Note=Pro-rich |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 768_825 | 0 | 289 | Compositional bias | Note=Glu-rich |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 428_730 | -73 | 289 | Compositional bias | Note=Pro-rich |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 768_825 | -73 | 289 | Compositional bias | Note=Glu-rich |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 651_668 | 98 | 855 | Domain | WH2 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 651_668 | 0 | 289 | Domain | WH2 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 651_668 | -73 | 289 | Domain | WH2 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 103_133 | 98 | 855 | Repeat | Note=ANK 4 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 137_167 | 98 | 855 | Repeat | Note=ANK 5 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 171_201 | 98 | 855 | Repeat | Note=ANK 6 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 205_235 | 98 | 855 | Repeat | Note=ANK 7 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 239_268 | 98 | 855 | Repeat | Note=ANK 8 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 271_300 | 98 | 855 | Repeat | Note=ANK 9 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 103_133 | 0 | 289 | Repeat | Note=ANK 4 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 137_167 | 0 | 289 | Repeat | Note=ANK 5 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 171_201 | 0 | 289 | Repeat | Note=ANK 6 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 1_31 | 0 | 289 | Repeat | Note=ANK 1 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 205_235 | 0 | 289 | Repeat | Note=ANK 7 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 239_268 | 0 | 289 | Repeat | Note=ANK 8 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 271_300 | 0 | 289 | Repeat | Note=ANK 9 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 35_64 | 0 | 289 | Repeat | Note=ANK 2 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000416731 | + | 0 | 7 | 69_99 | 0 | 289 | Repeat | Note=ANK 3 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 103_133 | -73 | 289 | Repeat | Note=ANK 4 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 137_167 | -73 | 289 | Repeat | Note=ANK 5 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 171_201 | -73 | 289 | Repeat | Note=ANK 6 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 1_31 | -73 | 289 | Repeat | Note=ANK 1 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 205_235 | -73 | 289 | Repeat | Note=ANK 7 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 239_268 | -73 | 289 | Repeat | Note=ANK 8 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 271_300 | -73 | 289 | Repeat | Note=ANK 9 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 35_64 | -73 | 289 | Repeat | Note=ANK 2 |
Tgene | >ESPN | chr1:6647351 | chr1:6488286 | ENST00000461727 | + | 0 | 8 | 69_99 | -73 | 289 | Repeat | Note=ANK 3 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 407_430 | 408 | 689 | Zinc finger | C2H2-type 5 |
Hgene | >ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 436_459 | 408 | 689 | Zinc finger | C2H2-type 6 |
Hgene | >ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 465_487 | 408 | 689 | Zinc finger | C2H2-type 7 |
Hgene | >ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 493_515 | 408 | 689 | Zinc finger | C2H2-type 8 |
Hgene | >ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 521_544 | 408 | 689 | Zinc finger | C2H2-type 9 |
Hgene | >ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 550_572 | 408 | 689 | Zinc finger | C2H2-type 10 |
Hgene | >ZBTB48 | chr1:6647351 | chr1:6488286 | ENST00000377674 | + | 6 | 11 | 578_600 | 408 | 689 | Zinc finger | C2H2-type 11 |
Tgene | ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 1_31 | 98 | 855 | Repeat | Note=ANK 1 |
Tgene | ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 35_64 | 98 | 855 | Repeat | Note=ANK 2 |
Tgene | ESPN | chr1:6647351 | chr1:6488286 | ENST00000377828 | + | 0 | 13 | 69_99 | 98 | 855 | Repeat | Note=ANK 3 |
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FusionGeneSequence for ZBTB48_ESPN |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ZBTB48_ENST00000377674_chr1_6647351_+_ESPN_ENST00000377828_chr1_6488286_+_1165aa MDGSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTGHLALTSG NRDQVLLAARELRVPEAVELCQSFKPKTSVGQAAGGQSGLGPPASQNVNSHVKEPAGLEEEEVSRTLGLVPRDQEPRGSHSPQRPQLHSP AQSEGPSSLCGKLKQALKPCPLEDKKPEDCKVPPRPLEAEGAQLQGGSNEWEVVVQVEDDGDGDYMSEPEAVLTRRKSNVIRKPCAAEPA LSAGSLAAEPAENRKGTAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFR RRMELRVHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHGAPKPHADKDNSGATVLHLAARFGHPEVVNWLLHHGGGDPTAATDMGAL PIHYAAAKGDFPSLRLLVEHYPEGVNAQTKNGATPLYLACQEGHLEVTQYLVQECGADPHARAHDGMTPLHAAAQMGHSPVIVWLVSCTD VSLSEQDKDGATAMHFAASRGHTKVLSWLLLHGGEISADLWGGTPLHDAAENGELECCQILVVNGAELDVRDRDGYTAADLSDFNGHSHC TRYLRTVENLSVEHRVLSRDPSAELEAKQPDSGMSSPNTTVSVQPLNFDLSSPTSTLSNYDSCSSSHSSIKGQHPPCGLSSARAADIQSY MDMLNPELGLPRGTIGKPTPPPPPPSFPPPPPPPGTQLPPPPPGYPAPKPPVGPQAADIYMQTKNKLRHVETEALKKELSSCDGHDGLRR QDSSRKPRAFSKQPSTGDYYRQLGRCPGETLAARPGMAHSEEVRARQPARAGCPRLGPAARGSLEGPSAPPQAALLPGNHVPNGCAADPK ASRELPPPPPPPPPPLPEAASSPPPAPPLPLESAGPGCGQRRSSSSTGSTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQSKGLTTVFSG IGQPAFQPDSPLPSVSPALSPVRSPTPPAAGFQPLLNGSLVPVPPTTPAPGVQLDVEALIPTHDEQGRPIPEWKRQVMVRKMQLKMQEEE |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ZBTB48_ENST00000377674_chr1_6647351_+_ESPN_ENST00000377828_chr1_6488286_+_3495nt ATGGACGGCTCCTTCGTCCAGCACAGTGTGAGGGTTCTGCAGGAGCTCAACAAGCAGCGGGAGAAGGGCCAGTACTGCGACGCCACTCTG GACGTGGGGGGCCTGGTGTTTAAGGCACACTGGAGTGTCCTTGCCTGCTGCAGTCACTTTTTCCAGAGCCTCTACGGGGATGGCTCAGGG GGCAGTGTCGTCCTCCCTGCTGGCTTCGCTGAGATCTTTGGCCTCTTGTTGGACTTTTTCTACACTGGTCACCTCGCTCTCACCTCAGGG AACCGGGATCAGGTGCTCCTGGCAGCCAGGGAGTTGCGAGTGCCAGAGGCCGTAGAGCTGTGCCAGAGCTTCAAGCCCAAAACTTCAGTG GGACAGGCAGCAGGTGGCCAGAGTGGGCTGGGGCCCCCTGCCTCCCAGAATGTGAACAGCCACGTCAAGGAGCCGGCAGGCTTGGAAGAA GAGGAAGTTTCGAGGACTCTGGGTCTAGTCCCCAGGGATCAGGAGCCCAGAGGCAGTCATAGTCCTCAGAGGCCCCAGCTCCATTCCCCA GCTCAGAGTGAGGGCCCCTCCTCCCTCTGTGGGAAACTGAAGCAGGCCTTGAAGCCTTGTCCCCTTGAGGACAAGAAACCCGAGGACTGC AAAGTGCCCCCAAGGCCCTTAGAGGCTGAAGGTGCCCAGCTGCAGGGCGGCAGTAATGAGTGGGAAGTGGTGGTTCAAGTGGAGGATGAT GGGGATGGCGATTACATGTCTGAGCCTGAGGCTGTGCTGACCAGGAGGAAGTCAAATGTAATCCGAAAGCCCTGTGCAGCTGAGCCAGCC CTGAGCGCGGGCTCCCTAGCAGCTGAGCCTGCTGAGAACAGAAAAGGTACAGCGGTGCCGGTCGAATGCCCCACATGTCATAAAAAGTTC CTCAGCAAATATTATCTAAAAGTCCACAACAGGAAACATACTGGGGAGAAACCCTTTGAGTGTCCCAAATGTGGGAAGTGTTACTTTCGG AAGGAGAACCTCCTGGAGCATGAAGCCCGGAATTGCATGAACCGCTCGGAACAGGTCTTCACGTGCTCTGTGTGCCAGGAGACATTCCGC CGAAGGATGGAGCTGCGGGTGCACATGGTGTCTCACACAGGGGAGATGCCCTACAAGTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAAG AAGGACTTGCAGAGCCACATGATCAAACTTCATGGAGCCCCCAAGCCCCATGCAGACAAAGACAATTCTGGTGCCACAGTCTTGCATCTG GCTGCCCGCTTCGGCCACCCCGAGGTGGTGAACTGGCTCTTGCATCATGGCGGTGGGGACCCCACCGCGGCCACAGACATGGGCGCCCTG CCTATCCACTACGCTGCCGCCAAAGGAGACTTCCCCTCCCTGAGGCTTCTCGTCGAGCACTACCCTGAGGGAGTGAATGCCCAAACCAAG AACGGTGCCACGCCCCTGTACCTGGCGTGCCAGGAGGGCCACCTGGAGGTGACCCAGTACCTGGTGCAGGAATGCGGCGCAGACCCGCAC GCGCGCGCCCACGACGGCATGACCCCGCTGCACGCCGCGGCGCAGATGGGCCACAGCCCAGTCATCGTGTGGTTGGTGAGCTGCACCGAC GTGAGCCTGTCCGAGCAGGACAAAGACGGCGCCACCGCCATGCACTTCGCGGCGAGCCGCGGCCACACCAAGGTGCTCAGCTGGCTGCTG CTGCACGGCGGGGAGATCTCGGCTGACCTGTGGGGCGGGACCCCGCTGCACGACGCCGCCGAGAACGGGGAGCTAGAGTGCTGCCAGATC CTGGTAGTGAACGGCGCGGAGCTGGACGTCCGCGACCGCGACGGGTACACGGCCGCCGACCTGTCGGACTTCAACGGCCACAGCCACTGC ACCCGCTACCTGCGCACGGTGGAGAACCTGAGCGTGGAGCACCGCGTGCTTTCCCGGGATCCATCCGCAGAGCTGGAGGCTAAGCAGCCG GATTCAGGCATGTCCTCACCCAATACCACGGTGTCGGTCCAGCCGCTGAACTTTGACCTCAGCTCGCCTACCAGCACCCTCTCCAACTAC GACTCCTGCTCCTCCAGCCACTCCAGCATCAAGGGCCAGCACCCTCCATGTGGGCTTTCCAGCGCTAGAGCTGCAGACATACAGAGCTAC ATGGACATGCTGAACCCGGAGCTGGGCCTGCCTCGGGGCACGATTGGGAAGCCCACACCCCCACCACCCCCACCCAGCTTCCCCCCGCCA CCCCCGCCCCCAGGCACCCAACTGCCCCCACCCCCACCTGGCTACCCAGCTCCCAAGCCTCCTGTAGGACCACAGGCAGCTGACATCTAC ATGCAGACCAAGAACAAACTCCGCCACGTGGAGACAGAGGCCCTCAAGAAGGAGCTGAGCTCCTGTGACGGCCACGACGGGCTGCGGAGG CAGGACTCCAGCCGCAAGCCCCGCGCCTTCAGCAAGCAGCCCAGCACGGGGGACTACTACCGGCAGCTGGGCCGCTGCCCCGGCGAGACG CTGGCCGCACGCCCGGGCATGGCGCACAGCGAGGAGGTGCGTGCCCGCCAGCCCGCGCGCGCCGGCTGCCCGCGCCTCGGCCCTGCCGCC CGCGGCTCACTCGAAGGCCCCTCCGCTCCCCCGCAGGCGGCGCTGCTTCCTGGGAACCATGTTCCTAACGGCTGCGCCGCGGACCCCAAG GCGTCCAGGGAGCTGCCACCGCCGCCCCCACCGCCGCCGCCGCCCCTGCCGGAGGCCGCGAGTTCGCCACCGCCGGCCCCGCCTCTGCCC CTCGAGAGCGCTGGCCCTGGCTGCGGGCAGCGCCGCTCCTCCTCGTCCACCGGCAGCACCAAGTCTTTCAACATGATGTCCCCGACGGGC GACAACTCGGAGCTACTGGCTGAGATTAAGGCAGGCAAGAGCCTGAAGCCGACGCCCCAGAGCAAGGGGCTGACCACAGTGTTCTCAGGC ATCGGGCAGCCGGCCTTCCAGCCCGATTCGCCGCTGCCTTCTGTGTCACCTGCACTGTCACCAGTCCGGAGCCCCACACCGCCAGCTGCG GGGTTTCAGCCGCTGCTCAATGGAAGCTTGGTTCCCGTGCCGCCCACTACTCCTGCGCCGGGAGTGCAGCTGGACGTGGAGGCTCTCATC CCCACGCACGATGAGCAGGGCCGGCCCATCCCCGAGTGGAAGCGCCAGGTGATGGTGCGCAAGATGCAGCTGAAGATGCAGGAGGAGGAG GAGCAGAGGCGGAAGGAGGAGGAGGAGGAGGCCCGGCTGGCCAGCATGCCCGCCTGGAGGCGGGACCTCCTGCGGAAGAAGCTGGAAGAA GAGAGGGAGCAGAAGCGGAAAGAGGAGGAGCGACAGAAGCAGGAGGAGCTGCGGCGGGAGAAGGAACAGTCAGAGAAGCTGCGGACGCTG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ZBTB48_ENST00000377674_chr1_6647351_+_ESPN_ENST00000377828_chr1_6488286_+_4451nt GGGTACGCATAGCCGGGCACTAGGTTCGTGGGCTGTGGAGGCGACGGAGCAGGGGGCCAGTGGGGCCAGCTCAGGGAGGACCTGCCTGGG AGCTTTCTCTTGCATACCCTCGCTTAGGCTGGCCGGGGTGTCACTTCTGCCTCCCTGCCCTCCAGACCATGGACGGCTCCTTCGTCCAGC ACAGTGTGAGGGTTCTGCAGGAGCTCAACAAGCAGCGGGAGAAGGGCCAGTACTGCGACGCCACTCTGGACGTGGGGGGCCTGGTGTTTA AGGCACACTGGAGTGTCCTTGCCTGCTGCAGTCACTTTTTCCAGAGCCTCTACGGGGATGGCTCAGGGGGCAGTGTCGTCCTCCCTGCTG GCTTCGCTGAGATCTTTGGCCTCTTGTTGGACTTTTTCTACACTGGTCACCTCGCTCTCACCTCAGGGAACCGGGATCAGGTGCTCCTGG CAGCCAGGGAGTTGCGAGTGCCAGAGGCCGTAGAGCTGTGCCAGAGCTTCAAGCCCAAAACTTCAGTGGGACAGGCAGCAGGTGGCCAGA GTGGGCTGGGGCCCCCTGCCTCCCAGAATGTGAACAGCCACGTCAAGGAGCCGGCAGGCTTGGAAGAAGAGGAAGTTTCGAGGACTCTGG GTCTAGTCCCCAGGGATCAGGAGCCCAGAGGCAGTCATAGTCCTCAGAGGCCCCAGCTCCATTCCCCAGCTCAGAGTGAGGGCCCCTCCT CCCTCTGTGGGAAACTGAAGCAGGCCTTGAAGCCTTGTCCCCTTGAGGACAAGAAACCCGAGGACTGCAAAGTGCCCCCAAGGCCCTTAG AGGCTGAAGGTGCCCAGCTGCAGGGCGGCAGTAATGAGTGGGAAGTGGTGGTTCAAGTGGAGGATGATGGGGATGGCGATTACATGTCTG AGCCTGAGGCTGTGCTGACCAGGAGGAAGTCAAATGTAATCCGAAAGCCCTGTGCAGCTGAGCCAGCCCTGAGCGCGGGCTCCCTAGCAG CTGAGCCTGCTGAGAACAGAAAAGGTACAGCGGTGCCGGTCGAATGCCCCACATGTCATAAAAAGTTCCTCAGCAAATATTATCTAAAAG TCCACAACAGGAAACATACTGGGGAGAAACCCTTTGAGTGTCCCAAATGTGGGAAGTGTTACTTTCGGAAGGAGAACCTCCTGGAGCATG AAGCCCGGAATTGCATGAACCGCTCGGAACAGGTCTTCACGTGCTCTGTGTGCCAGGAGACATTCCGCCGAAGGATGGAGCTGCGGGTGC ACATGGTGTCTCACACAGGGGAGATGCCCTACAAGTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAAGAAGGACTTGCAGAGCCACATGA TCAAACTTCATGGAGCCCCCAAGCCCCATGCAGACAAAGACAATTCTGGTGCCACAGTCTTGCATCTGGCTGCCCGCTTCGGCCACCCCG AGGTGGTGAACTGGCTCTTGCATCATGGCGGTGGGGACCCCACCGCGGCCACAGACATGGGCGCCCTGCCTATCCACTACGCTGCCGCCA AAGGAGACTTCCCCTCCCTGAGGCTTCTCGTCGAGCACTACCCTGAGGGAGTGAATGCCCAAACCAAGAACGGTGCCACGCCCCTGTACC TGGCGTGCCAGGAGGGCCACCTGGAGGTGACCCAGTACCTGGTGCAGGAATGCGGCGCAGACCCGCACGCGCGCGCCCACGACGGCATGA CCCCGCTGCACGCCGCGGCGCAGATGGGCCACAGCCCAGTCATCGTGTGGTTGGTGAGCTGCACCGACGTGAGCCTGTCCGAGCAGGACA AAGACGGCGCCACCGCCATGCACTTCGCGGCGAGCCGCGGCCACACCAAGGTGCTCAGCTGGCTGCTGCTGCACGGCGGGGAGATCTCGG CTGACCTGTGGGGCGGGACCCCGCTGCACGACGCCGCCGAGAACGGGGAGCTAGAGTGCTGCCAGATCCTGGTAGTGAACGGCGCGGAGC TGGACGTCCGCGACCGCGACGGGTACACGGCCGCCGACCTGTCGGACTTCAACGGCCACAGCCACTGCACCCGCTACCTGCGCACGGTGG AGAACCTGAGCGTGGAGCACCGCGTGCTTTCCCGGGATCCATCCGCAGAGCTGGAGGCTAAGCAGCCGGATTCAGGCATGTCCTCACCCA ATACCACGGTGTCGGTCCAGCCGCTGAACTTTGACCTCAGCTCGCCTACCAGCACCCTCTCCAACTACGACTCCTGCTCCTCCAGCCACT CCAGCATCAAGGGCCAGCACCCTCCATGTGGGCTTTCCAGCGCTAGAGCTGCAGACATACAGAGCTACATGGACATGCTGAACCCGGAGC TGGGCCTGCCTCGGGGCACGATTGGGAAGCCCACACCCCCACCACCCCCACCCAGCTTCCCCCCGCCACCCCCGCCCCCAGGCACCCAAC TGCCCCCACCCCCACCTGGCTACCCAGCTCCCAAGCCTCCTGTAGGACCACAGGCAGCTGACATCTACATGCAGACCAAGAACAAACTCC GCCACGTGGAGACAGAGGCCCTCAAGAAGGAGCTGAGCTCCTGTGACGGCCACGACGGGCTGCGGAGGCAGGACTCCAGCCGCAAGCCCC GCGCCTTCAGCAAGCAGCCCAGCACGGGGGACTACTACCGGCAGCTGGGCCGCTGCCCCGGCGAGACGCTGGCCGCACGCCCGGGCATGG CGCACAGCGAGGAGGTGCGTGCCCGCCAGCCCGCGCGCGCCGGCTGCCCGCGCCTCGGCCCTGCCGCCCGCGGCTCACTCGAAGGCCCCT CCGCTCCCCCGCAGGCGGCGCTGCTTCCTGGGAACCATGTTCCTAACGGCTGCGCCGCGGACCCCAAGGCGTCCAGGGAGCTGCCACCGC CGCCCCCACCGCCGCCGCCGCCCCTGCCGGAGGCCGCGAGTTCGCCACCGCCGGCCCCGCCTCTGCCCCTCGAGAGCGCTGGCCCTGGCT GCGGGCAGCGCCGCTCCTCCTCGTCCACCGGCAGCACCAAGTCTTTCAACATGATGTCCCCGACGGGCGACAACTCGGAGCTACTGGCTG AGATTAAGGCAGGCAAGAGCCTGAAGCCGACGCCCCAGAGCAAGGGGCTGACCACAGTGTTCTCAGGCATCGGGCAGCCGGCCTTCCAGC CCGATTCGCCGCTGCCTTCTGTGTCACCTGCACTGTCACCAGTCCGGAGCCCCACACCGCCAGCTGCGGGGTTTCAGCCGCTGCTCAATG GAAGCTTGGTTCCCGTGCCGCCCACTACTCCTGCGCCGGGAGTGCAGCTGGACGTGGAGGCTCTCATCCCCACGCACGATGAGCAGGGCC GGCCCATCCCCGAGTGGAAGCGCCAGGTGATGGTGCGCAAGATGCAGCTGAAGATGCAGGAGGAGGAGGAGCAGAGGCGGAAGGAGGAGG AGGAGGAGGCCCGGCTGGCCAGCATGCCCGCCTGGAGGCGGGACCTCCTGCGGAAGAAGCTGGAAGAAGAGAGGGAGCAGAAGCGGAAAG AGGAGGAGCGACAGAAGCAGGAGGAGCTGCGGCGGGAGAAGGAACAGTCAGAGAAGCTGCGGACGCTGGGCTACGATGAGAGCAAGCTGG CGCCCTGGCAGCGACAGGTCATCCTGAAGAAGGGGGACATCGCTAAGTACTAGAGGCCGCAGACTCCTGTCCGCAGCCTCGCAGCTCCGT GGGGCCCTCCGCCCCAGCCCCAGCCAGCCAGGCCCTGGTGGAAAGGCTGGGAGCCGCACAGCCCTCCCCTCCTGCGCTGGAAACCCTCCC TGACCCCCACCCTGGCCCCCCGTATCCCCAGCCCTTGGCAACACTGGAGTGCACACGCCGCCACGGTTGCCCAGAAAAAGTGCCCAAGCT GCTGACGCAAACAACAACAAATGCTGCTTATTTGCATGCCGACTTACATATATTTGCATGTTCGTTGACTATCAAAGAGTGCAGAGCTCT CCCCAGCCCCGTGGGTGGTGACTTTGTTTTCCTGCGGGGCTCAGCCCCCTCCAGGATGCAGCCCCCTCCCCCGCACCCCGGAACCGGCGT CGCTGGCGCATCCTGGGTGGAGGCAGGCCCCGAGCTCGGGGAAGGGGTTTTCCCTTCCTCTCTGACCCAGATCTGCGCGCGGCCTAGCCC GGGCCTCATTTCTTATCCCCGCCAAGGGTTTCCTCTCAGTCATTTGTTTACCAGAAACATGAAAACTGCCTGTCTGGCCGGGCCGCACTT GTGGCCCCCGGGACCCCACCTCTGGCCCCACCTCCCTCAAGTCTGCGCCCCGTCCCCAGCCAGACCCACTCGCTGCCGGGACCCTTTCAC TGCCCCGGTGGAGTGAATAGAGGATGAGGGGCCCTGACCCTGTGTCTCCAACTGCTGCACCCCATCCCGACCCTGTCTCCGCCACCTCGC |
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FusionGenePPI for ZBTB48_ESPN |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZBTB48 | C7orf34, DVL3, ZBTB8A, NUDT21, ILK, PNRC2, CDKN1A, TNFRSF14, RGS2, CDK2AP2, C11orf58, UPF2, EP300, ZBTB7A, ZBTB48, NME7, GPATCH2L, KRTAP10-5, PTTG1, DVL2, TRIM41, RET, CDC23, NCBP2, FBXO7, ETAA1, HIST1H1C, NSD1, HIST1H1A, ZNF121, ZC3HAV1, MRPS34, RRP7A, MRPS35, FBXO11, APOBEC3C, NOL6, RPL26L1, PTCD3, MRPS5, RPL36AL, HIRA, MRPS31, MRPS18C, ZNF777, LTV1, DAP3, ZBTB24, MRPS11, ZSCAN25, BMS1, DDX24, TPD52, DGCR8, MRPS9, CEBPZ, MRPS2, MRPS33, RBM34, FTSJ3, RPL5, CENPB, RBM28, RPS3A, RPL3, MRPS7, PBRM1, TSR1, DDX54, GZF1, SCAF1, DKC1, SRBD1, GNL2, DHX57, LRP2, GTPBP4, RBM19, ZNF771, NSA2, MRPS24, TEX10, RPF2, MRPS10, UTP23, RPL32, MAK16, RPS15, PPAN-P2RY11, CTCF, RPS3 | ESPN |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZBTB48_ESPN |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZBTB48_ESPN |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | ESPN | C0011053 | Deafness | 2 | CTD_human |
Tgene | ESPN | C0042594 | Vestibular Diseases | 1 | CTD_human |
Tgene | ESPN | C1837007 | DEAFNESS, AUTOSOMAL RECESSIVE 36, WITH OR WITHOUT VESTIBULAR INVOLVEMENT | 1 | CTD_human;UNIPROT |