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Fusion gene ID: 42466 |
FusionGeneSummary for ZBTB20_CMSS1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ZBTB20_CMSS1 | Fusion gene ID: 42466 | Hgene | Tgene | Gene symbol | ZBTB20 | CMSS1 | Gene ID | 26137 | 84319 |
Gene name | zinc finger and BTB domain containing 20 | cms1 ribosomal small subunit homolog (yeast) | |
Synonyms | DPZF|HOF|ODA-8S|PRIMS|ZNF288 | C3orf26 | |
Cytomap | 3q13.31 | 3q12.1 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger and BTB domain-containing protein 20BTB/POZ zinc finger protein DPZFdendritic cell-derived BTB/POZ zinc fingerzinc finger protein 288 | protein CMSS1 | |
Modification date | 20180526 | 20180519 | |
UniProtAcc | Q9HC78 | Q9BQ75 | |
Ensembl transtripts involved in fusion gene | ENST00000462705, ENST00000393785, ENST00000481632, ENST00000471418, ENST00000357258, ENST00000464560, ENST00000488663, ENST00000474710, | ENST00000421999, ENST00000496116, ENST00000489081, | |
Fusion gene scores | * DoF score | 24 X 12 X 15=4320 | 6 X 3 X 7=126 |
# samples | 33 | 8 | |
** MAII score | log2(33/4320*10)=-3.71049338280502 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/126*10)=-0.655351828612554 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ZBTB20 [Title/Abstract] AND CMSS1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | KIRC | TCGA-CJ-5671-01A | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000462705 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000462705 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000462705 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
Frame-shift | ENST00000393785 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000393785 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000393785 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
In-frame | ENST00000481632 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000481632 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000481632 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
Frame-shift | ENST00000471418 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000471418 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000471418 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
In-frame | ENST00000357258 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000357258 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000357258 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
Frame-shift | ENST00000464560 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000464560 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000464560 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
intron-3CDS | ENST00000488663 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
intron-intron | ENST00000488663 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
intron-intron | ENST00000488663 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
Frame-shift | ENST00000474710 | ENST00000421999 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000474710 | ENST00000496116 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
5CDS-intron | ENST00000474710 | ENST00000489081 | ZBTB20 | chr3 | 114069121 | - | CMSS1 | chr3 | 99865817 | + |
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FusionProtFeatures for ZBTB20_CMSS1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ZBTB20 | CMSS1 |
May be a transcription factor that may be involved inhematopoiesis, oncogenesis, and immune responses(PubMed:11352661). Plays a role in postnatal myogenesis, may beinvolved in the regulation of satellite cells self-renewal (Bysimilarity). {ECO:0000250|UniProtKB:Q8K0L9,ECO:0000269|PubMed:11352661}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000357258 | - | 9 | 10 | 104_167 | 528 | 669 | Domain | BTB |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000393785 | - | 5 | 6 | 104_167 | 528 | 669 | Domain | BTB |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000462705 | - | 11 | 12 | 104_167 | 528 | 669 | Domain | BTB |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000464560 | - | 7 | 8 | 104_167 | 528 | 669 | Domain | BTB |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000471418 | - | 6 | 7 | 104_167 | 528 | 669 | Domain | BTB |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000474710 | - | 4 | 5 | 104_167 | 601 | 742 | Domain | BTB |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000481632 | - | 5 | 6 | 104_167 | 528 | 669 | Domain | BTB |
Hgene | ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000474710 | - | 4 | 5 | 578_600 | 601 | 742 | Zinc finger | C2H2-type 1 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000357258 | - | 9 | 10 | 578_600 | 528 | 669 | Zinc finger | C2H2-type 1 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000357258 | - | 9 | 10 | 606_628 | 528 | 669 | Zinc finger | C2H2-type 2 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000357258 | - | 9 | 10 | 634_656 | 528 | 669 | Zinc finger | C2H2-type 3 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000357258 | - | 9 | 10 | 662_684 | 528 | 669 | Zinc finger | C2H2-type 4 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000357258 | - | 9 | 10 | 715_737 | 528 | 669 | Zinc finger | C2H2-type 5 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000393785 | - | 5 | 6 | 578_600 | 528 | 669 | Zinc finger | C2H2-type 1 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000393785 | - | 5 | 6 | 606_628 | 528 | 669 | Zinc finger | C2H2-type 2 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000393785 | - | 5 | 6 | 634_656 | 528 | 669 | Zinc finger | C2H2-type 3 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000393785 | - | 5 | 6 | 662_684 | 528 | 669 | Zinc finger | C2H2-type 4 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000393785 | - | 5 | 6 | 715_737 | 528 | 669 | Zinc finger | C2H2-type 5 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000462705 | - | 11 | 12 | 578_600 | 528 | 669 | Zinc finger | C2H2-type 1 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000462705 | - | 11 | 12 | 606_628 | 528 | 669 | Zinc finger | C2H2-type 2 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000462705 | - | 11 | 12 | 634_656 | 528 | 669 | Zinc finger | C2H2-type 3 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000462705 | - | 11 | 12 | 662_684 | 528 | 669 | Zinc finger | C2H2-type 4 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000462705 | - | 11 | 12 | 715_737 | 528 | 669 | Zinc finger | C2H2-type 5 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000464560 | - | 7 | 8 | 578_600 | 528 | 669 | Zinc finger | C2H2-type 1 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000464560 | - | 7 | 8 | 606_628 | 528 | 669 | Zinc finger | C2H2-type 2 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000464560 | - | 7 | 8 | 634_656 | 528 | 669 | Zinc finger | C2H2-type 3 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000464560 | - | 7 | 8 | 662_684 | 528 | 669 | Zinc finger | C2H2-type 4 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000464560 | - | 7 | 8 | 715_737 | 528 | 669 | Zinc finger | C2H2-type 5 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000471418 | - | 6 | 7 | 578_600 | 528 | 669 | Zinc finger | C2H2-type 1 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000471418 | - | 6 | 7 | 606_628 | 528 | 669 | Zinc finger | C2H2-type 2 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000471418 | - | 6 | 7 | 634_656 | 528 | 669 | Zinc finger | C2H2-type 3 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000471418 | - | 6 | 7 | 662_684 | 528 | 669 | Zinc finger | C2H2-type 4 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000471418 | - | 6 | 7 | 715_737 | 528 | 669 | Zinc finger | C2H2-type 5 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000474710 | - | 4 | 5 | 606_628 | 601 | 742 | Zinc finger | C2H2-type 2 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000474710 | - | 4 | 5 | 634_656 | 601 | 742 | Zinc finger | C2H2-type 3 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000474710 | - | 4 | 5 | 662_684 | 601 | 742 | Zinc finger | C2H2-type 4 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000474710 | - | 4 | 5 | 715_737 | 601 | 742 | Zinc finger | C2H2-type 5 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000481632 | - | 5 | 6 | 578_600 | 528 | 669 | Zinc finger | C2H2-type 1 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000481632 | - | 5 | 6 | 606_628 | 528 | 669 | Zinc finger | C2H2-type 2 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000481632 | - | 5 | 6 | 634_656 | 528 | 669 | Zinc finger | C2H2-type 3 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000481632 | - | 5 | 6 | 662_684 | 528 | 669 | Zinc finger | C2H2-type 4 |
Hgene | >ZBTB20 | chr3:114069121 | chr3:99865817 | ENST00000481632 | - | 5 | 6 | 715_737 | 528 | 669 | Zinc finger | C2H2-type 5 |
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FusionGeneSequence for ZBTB20_CMSS1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ZBTB20_ENST00000462705_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_787aa MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVL RVSQSEALQILTAASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSVDRIYSALYACSMQ NGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQ RVQILERNESEECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDSQAEPTQPEQAAEAPAEGGPQTNQLETGASSP ERSNEVEMDSTVITVSNSSDKSVLQQPSVNTSIGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKP FLFSLPQPLAGQQTQFVTVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECTLCNKTFTAKQNYVKHMFVHTEASDGEGEGDTE VMQQETVPVPVPSEKTKQPKECFLIQPKERKENTTKTRKRRKKKITDVLAKSEPKPGLPEDLQKLMKDYYSSRRLVIELEELNLPDSCFL KANDLTHSLSSYLKEICPKWVKLRKNHSEKKSVLMLIICSSAVRALELIRSMTAFRGDGKVIKLFAKHIKVQAQVKLLEKRVVHLGVGTP >In-frame_ZBTB20_ENST00000481632_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_787aa MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVL RVSQSEALQILTAASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSVDRIYSALYACSMQ NGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQ RVQILERNESEECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDSQAEPTQPEQAAEAPAEGGPQTNQLETGASSP ERSNEVEMDSTVITVSNSSDKSVLQQPSVNTSIGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKP FLFSLPQPLAGQQTQFVTVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECTLCNKTFTAKQNYVKHMFVHTEASDGEGEGDTE VMQQETVPVPVPSEKTKQPKECFLIQPKERKENTTKTRKRRKKKITDVLAKSEPKPGLPEDLQKLMKDYYSSRRLVIELEELNLPDSCFL KANDLTHSLSSYLKEICPKWVKLRKNHSEKKSVLMLIICSSAVRALELIRSMTAFRGDGKVIKLFAKHIKVQAQVKLLEKRVVHLGVGTP >In-frame_ZBTB20_ENST00000357258_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_787aa MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVL RVSQSEALQILTAASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSVDRIYSALYACSMQ NGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQ RVQILERNESEECTEDTDQAEGTESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDSQAEPTQPEQAAEAPAEGGPQTNQLETGASSP ERSNEVEMDSTVITVSNSSDKSVLQQPSVNTSIGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKP FLFSLPQPLAGQQTQFVTVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECTLCNKTFTAKQNYVKHMFVHTEASDGEGEGDTE VMQQETVPVPVPSEKTKQPKECFLIQPKERKENTTKTRKRRKKKITDVLAKSEPKPGLPEDLQKLMKDYYSSRRLVIELEELNLPDSCFL KANDLTHSLSSYLKEICPKWVKLRKNHSEKKSVLMLIICSSAVRALELIRSMTAFRGDGKVIKLFAKHIKVQAQVKLLEKRVVHLGVGTP |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ZBTB20_ENST00000462705_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_2361nt ATGACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAACCGTGGCCACTTC TGTGACGTAACGGTGCGCATCCACGGGAGCATGCTGCGCGCACACCGCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTCCAGGACAAACTG CTGCTTGGCTACAGCGACATCGAGATCCCGTCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTA CGGGTCTCGCAGTCGGAAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCACGCGCATCGTG TCACAGAACGTGGGCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAGTCAGGCACGTCAGGCCAG AGCAGCGACACGGAGTCGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAGGATCTACTCGGCACTCTACGCGTGCTCCATGCAG AATGGCAGCGGCGAGCGCTCTTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGACCACCACATGGAA GACCCCAGCTGGATCACACGCATCCATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACGCACTGCCGCAAG CAGCCCCGGCCTGTGCGCATCCAGACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTACTACGGGCAGCAA AGGGTGCAGATCCTGGAACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAGCCCAAAGGTGAA AGCTTCGACTCGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGGGCCTGGGGCGGCGCGGGACAGCCAG GCTGAACCCACCCAACCCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTGGTCCGCAGACAAACCAGCTAGAAACAGGTGCTTCCTCTCCG GAGAGAAGCAATGAAGTGGAGATGGACAGCACTGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAAC ACGTCCATCGGGCAGCCATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTG ACCAGCAACACGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCGCGGGCAGTGGCCCCAAGCCT TTCCTCTTCAGCCTGCCACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGTGACAGTGTCCCAGCCCGGTCTGTCGACCTTTACTGCACAG CTGCCAGCGCCACAGCCCCTGGCCTCATCCGCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGC AACAAGACTTTCACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGAAGCATCAGATGGTGAAGGAGAAGGAGACACAGAA GTGATGCAGCAGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATGTTTTTTGATACAACCAAAGGAAAGA AAAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGAAGAAAATTACTGATGTTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTGAA GACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGACTCCTGTTTCCTC AAGGCCAATGATTTGACTCACAGTCTTTCCTCATACCTAAAAGAAATTTGTCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAG AAATCGGTCCTGATGCTGATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAA GTTATAAAATTATTTGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGTGTAGGAACTCCG GGGAGAATTAAAGAACTTGTTAAACAAGGTGGCCTTAATTTGAGCCCCTTAAAATTTCTGGTTTTTGACTGGAACTGGAGAGATCAGAAG TTGAGGAGAATGATGGACATTCCCGAGATAAGAAAGGAGGTATTCGAACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATCC >In-frame_ZBTB20_ENST00000481632_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_2361nt ATGACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAACCGTGGCCACTTC TGTGACGTAACGGTGCGCATCCACGGGAGCATGCTGCGCGCACACCGCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTCCAGGACAAACTG CTGCTTGGCTACAGCGACATCGAGATCCCGTCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTA CGGGTCTCGCAGTCGGAAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCACGCGCATCGTG TCACAGAACGTGGGCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAGTCAGGCACGTCAGGCCAG AGCAGCGACACGGAGTCGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAGGATCTACTCGGCACTCTACGCGTGCTCCATGCAG AATGGCAGCGGCGAGCGCTCTTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGACCACCACATGGAA GACCCCAGCTGGATCACACGCATCCATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACGCACTGCCGCAAG CAGCCCCGGCCTGTGCGCATCCAGACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTACTACGGGCAGCAA AGGGTGCAGATCCTGGAACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAGCCCAAAGGTGAA AGCTTCGACTCGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGGGCCTGGGGCGGCGCGGGACAGCCAG GCTGAACCCACCCAACCCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTGGTCCGCAGACAAACCAGCTAGAAACAGGTGCTTCCTCTCCG GAGAGAAGCAATGAAGTGGAGATGGACAGCACTGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAAC ACGTCCATCGGGCAGCCATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTG ACCAGCAACACGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCGCGGGCAGTGGCCCCAAGCCT TTCCTCTTCAGCCTGCCACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGTGACAGTGTCCCAGCCCGGTCTGTCGACCTTTACTGCACAG CTGCCAGCGCCACAGCCCCTGGCCTCATCCGCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGC AACAAGACTTTCACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGAAGCATCAGATGGTGAAGGAGAAGGAGACACAGAA GTGATGCAGCAGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATGTTTTTTGATACAACCAAAGGAAAGA AAAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGAAGAAAATTACTGATGTTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTGAA GACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGACTCCTGTTTCCTC AAGGCCAATGATTTGACTCACAGTCTTTCCTCATACCTAAAAGAAATTTGTCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAG AAATCGGTCCTGATGCTGATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAA GTTATAAAATTATTTGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGTGTAGGAACTCCG GGGAGAATTAAAGAACTTGTTAAACAAGGTGGCCTTAATTTGAGCCCCTTAAAATTTCTGGTTTTTGACTGGAACTGGAGAGATCAGAAG TTGAGGAGAATGATGGACATTCCCGAGATAAGAAAGGAGGTATTCGAACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATCC >In-frame_ZBTB20_ENST00000357258_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_2361nt ATGACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAACCGTGGCCACTTC TGTGACGTAACGGTGCGCATCCACGGGAGCATGCTGCGCGCACACCGCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTCCAGGACAAACTG CTGCTTGGCTACAGCGACATCGAGATCCCGTCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTA CGGGTCTCGCAGTCGGAAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCACGCGCATCGTG TCACAGAACGTGGGCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAGTCAGGCACGTCAGGCCAG AGCAGCGACACGGAGTCGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAGGATCTACTCGGCACTCTACGCGTGCTCCATGCAG AATGGCAGCGGCGAGCGCTCTTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGACCACCACATGGAA GACCCCAGCTGGATCACACGCATCCATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACGCACTGCCGCAAG CAGCCCCGGCCTGTGCGCATCCAGACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTACTACGGGCAGCAA AGGGTGCAGATCCTGGAACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAGCCCAAAGGTGAA AGCTTCGACTCGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGGGCCTGGGGCGGCGCGGGACAGCCAG GCTGAACCCACCCAACCCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTGGTCCGCAGACAAACCAGCTAGAAACAGGTGCTTCCTCTCCG GAGAGAAGCAATGAAGTGGAGATGGACAGCACTGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAAC ACGTCCATCGGGCAGCCATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTG ACCAGCAACACGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCGCGGGCAGTGGCCCCAAGCCT TTCCTCTTCAGCCTGCCACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGTGACAGTGTCCCAGCCCGGTCTGTCGACCTTTACTGCACAG CTGCCAGCGCCACAGCCCCTGGCCTCATCCGCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGC AACAAGACTTTCACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGAAGCATCAGATGGTGAAGGAGAAGGAGACACAGAA GTGATGCAGCAGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATGTTTTTTGATACAACCAAAGGAAAGA AAAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGAAGAAAATTACTGATGTTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTGAA GACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGACTCCTGTTTCCTC AAGGCCAATGATTTGACTCACAGTCTTTCCTCATACCTAAAAGAAATTTGTCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAG AAATCGGTCCTGATGCTGATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAA GTTATAAAATTATTTGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGTGTAGGAACTCCG GGGAGAATTAAAGAACTTGTTAAACAAGGTGGCCTTAATTTGAGCCCCTTAAAATTTCTGGTTTTTGACTGGAACTGGAGAGATCAGAAG TTGAGGAGAATGATGGACATTCCCGAGATAAGAAAGGAGGTATTCGAACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATCC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ZBTB20_ENST00000462705_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_3398nt GGAATTTTATCTCTGCTCACAGTCTACATTACAACATTAGTTCATTCTGGGCACTTTAGCTTCCTTGAATCTCCAGTTGATCTCACACCC ATGCCTATGATATTCTTCTCCTGGTTAATCAAGAATTCTCTATTTCTGCTCCGTCATCCATGCCACTACAAATAAAAAGAAGTGTTAAGA ATTGCCTTTGGGACTCTGAAGGCTGAAGAATTGATGAATTGCAAGTTTGTGCCCCATAGCTGCACAGCCTATGTCTAAGCACAGCTCATC TTCACAAACTGAAGTGGATCTTGATTTCTGGAAATGTCCAAATAATGACAACAACCCCATGGAGGTGGATACATCAGAGTCAGCTGGAGG TGGTCAGAATTATTTGCAATGTTTGGGAAAGCACCTACCAAGGCTTCCTATTACCTATTTCACAGAATGTTTCATCATTACTAACAGGAT ATTCCTCATGACATTGCTGTCTGATCTTTGACCATCAGTCTGTGACCTGCCCCTTCTCTTTACATGCAGCCGCTCTCTGCTCCCTGCCCC AATGAACATCTGCACTAGGCCCAAGCCTTGGAGTAATTTACCTGAAGAGTGACACCATTGATTTTGAAACTACTGAAGAAACCCAAGACA GCTGAAAACCAGAAGGCATCTGAGGAGAATGAGATTACTCAGCCGGGTGGATCCAGCGCCAAGCCGGGCCTTCCCTGCCTGAACTTTGAA GCTGTTTTGTCTCCAGACCCAGCCCTCATCCACTCAACACATTCACTGACAAACTCTCACGCTCACACCGGGTCATCTGATTGTGACATC AGTTGCAAGGGGATGACCGAGCGCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAAC CGTGGCCACTTCTGTGACGTAACGGTGCGCATCCACGGGAGCATGCTGCGCGCACACCGCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTC CAGGACAAACTGCTGCTTGGCTACAGCGACATCGAGATCCCGTCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTAC AGCGGCGTGCTACGGGTCTCGCAGTCGGAAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGC ACGCGCATCGTGTCACAGAACGTGGGCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAGTCAGGC ACGTCAGGCCAGAGCAGCGACACGGAGTCGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAGGATCTACTCGGCACTCTACGCG TGCTCCATGCAGAATGGCAGCGGCGAGCGCTCTTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGAC CACCACATGGAAGACCCCAGCTGGATCACACGCATCCATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACG CACTGCCGCAAGCAGCCCCGGCCTGTGCGCATCCAGACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTAC TACGGGCAGCAAAGGGTGCAGATCCTGGAACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAG CCCAAAGGTGAAAGCTTCGACTCGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGGGCCTGGGGCGGCG CGGGACAGCCAGGCTGAACCCACCCAACCCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTGGTCCGCAGACAAACCAGCTAGAAACAGGT GCTTCCTCTCCGGAGAGAAGCAATGAAGTGGAGATGGACAGCACTGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAG CCTTCGGTCAACACGTCCATCGGGCAGCCATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATG CCTCTGACCTTGACCAGCAACACGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCGCGGGCAGT GGCCCCAAGCCTTTCCTCTTCAGCCTGCCACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGTGACAGTGTCCCAGCCCGGTCTGTCGACC TTTACTGCACAGCTGCCAGCGCCACAGCCCCTGGCCTCATCCGCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAG TGCACTCTCTGCAACAAGACTTTCACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGAAGCATCAGATGGTGAAGGAGAA GGAGACACAGAAGTGATGCAGCAGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATGTTTTTTGATACAA CCAAAGGAAAGAAAAGAGAATACCACCAAGACCAGGAAAAGAAGAAAGAAGAAAATTACTGATGTTCTTGCAAAATCAGAACCAAAACCA GGGTTACCTGAAGACCTACAGAAGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGAC TCCTGTTTCCTCAAGGCCAATGATTTGACTCACAGTCTTTCCTCATACCTAAAAGAAATTTGTCCTAAGTGGGTAAAACTTAGGAAGAAC CACAGTGAGAAGAAATCGGTCCTGATGCTGATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGCATTCAGA GGAGACGGCAAAGTTATAAAATTATTTGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGT GTAGGAACTCCGGGGAGAATTAAAGAACTTGTTAAACAAGGTGGCCTTAATTTGAGCCCCTTAAAATTTCTGGTTTTTGACTGGAACTGG AGAGATCAGAAGTTGAGGAGAATGATGGACATTCCCGAGATAAGAAAGGAGGTATTCGAACTTCTGGAAATGGGAGTGCTCAGTCTGTGC AAGTCAGAATCCTTGAAACTGGGCCTTTTCTAAGTCTGTGTCCTAATGAAGATTCCAGTTTTCACAGTAGAAGTTGCATCTTATTTAATG ACTCTGATACATTGCAAGCACTCAGTAAATATCAGCAAATAGTTTATGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCT >In-frame_ZBTB20_ENST00000481632_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_3016nt GCAGGGAGCTTAACAGCCAGGCCTGGACACCCTCAAGAGACTGTGTGCTGATTCTCAGTCGTCACTCCTTGGATCAGGAACCATAGTCCT GATCTTTGACCATCAGTCTGTGACCTGCCCCTTCTCTTTACATGCAGCCGCTCTCTGCTCCCTGCCCCAATGAACATCTGCACTAGGCCC AAGCCTTGGAGTAATTTACCTGAAGAGTGACACCATTGATTTTGAAACTACTGAAGAAACCCAAGACAGCTGAAAACCAGAAGGCATCTG AGGAGAATGAGATTACTCAGCCGGGTGGATCCAGCGCCAAGCCGGGCCTTCCCTGCCTGAACTTTGAAGCTGTTTTGTCTCCAGACCCAG CCCTCATCCACTCAACACATTCACTGACAAACTCTCACGCTCACACCGGGTCATCTGATTGTGACATCAGTTGCAAGGGGATGACCGAGC GCATTCACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAACCGTGGCCACTTCTGTGACGTAA CGGTGCGCATCCACGGGAGCATGCTGCGCGCACACCGCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTCCAGGACAAACTGCTGCTTGGCT ACAGCGACATCGAGATCCCGTCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTACGGGTCTCGC AGTCGGAAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCACGCGCATCGTGTCACAGAACG TGGGCGATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAGTCAGGCACGTCAGGCCAGAGCAGCGACA CGGAGTCGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAGGATCTACTCGGCACTCTACGCGTGCTCCATGCAGAATGGCAGCG GCGAGCGCTCTTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGACCACCACATGGAAGACCCCAGCT GGATCACACGCATCCATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACGCACTGCCGCAAGCAGCCCCGGC CTGTGCGCATCCAGACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTACTACGGGCAGCAAAGGGTGCAGA TCCTGGAACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAGCCCAAAGGTGAAAGCTTCGACT CGGGCGTCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGGGCCTGGGGCGGCGCGGGACAGCCAGGCTGAACCCA CCCAACCCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTGGTCCGCAGACAAACCAGCTAGAAACAGGTGCTTCCTCTCCGGAGAGAAGCA ATGAAGTGGAGATGGACAGCACTGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAACACGTCCATCG GGCAGCCATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTGACCAGCAACA CGCAGGTCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCGCGGGCAGTGGCCCCAAGCCTTTCCTCTTCA GCCTGCCACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGTGACAGTGTCCCAGCCCGGTCTGTCGACCTTTACTGCACAGCTGCCAGCGC CACAGCCCCTGGCCTCATCCGCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGCAACAAGACTT TCACCGCCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGAAGCATCAGATGGTGAAGGAGAAGGAGACACAGAAGTGATGCAGC AGGAGACAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATGTTTTTTGATACAACCAAAGGAAAGAAAAGAGAATA CCACCAAGACCAGGAAAAGAAGAAAGAAGAAAATTACTGATGTTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTGAAGACCTACAGA AGCTGATGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGACTCCTGTTTCCTCAAGGCCAATG ATTTGACTCACAGTCTTTCCTCATACCTAAAAGAAATTTGTCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCC TGATGCTGATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAAGTTATAAAAT TATTTGCAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGTGTAGGAACTCCGGGGAGAATTA AAGAACTTGTTAAACAAGGTGGCCTTAATTTGAGCCCCTTAAAATTTCTGGTTTTTGACTGGAACTGGAGAGATCAGAAGTTGAGGAGAA TGATGGACATTCCCGAGATAAGAAAGGAGGTATTCGAACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATCCTTGAAACTGG GCCTTTTCTAAGTCTGTGTCCTAATGAAGATTCCAGTTTTCACAGTAGAAGTTGCATCTTATTTAATGACTCTGATACATTGCAAGCACT CAGTAAATATCAGCAAATAGTTTATGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAATGAAACTGTCCT >In-frame_ZBTB20_ENST00000357258_chr3_114069121_-_CMSS1_ENST00000421999_chr3_99865817_+_3190nt GGGGCGGGGGGAAGTTTAGGAGTTGAGGAAAGAAGATTAAAGAGCGCGAGGAGACAAATAAAAAGAAGTGTTAAGAATTGCCTTTGGGAC TCTGAAGGCTGAAGAATTGATGAATTGCAAGTTTGTGCCCCATAGCTGCACAGACTGCCTGAAGTTACATTTAGAGACTGAAATCACTGC ACCTTAAAAACAAAAGATTGAGCTGCACTGTATTCCTAATGTTTCATCATTACTAACAGGATATTCCTCATGACATTGCTGTCTGATCTT TGACCATCAGTCTGTGACCTGCCCCTTCTCTTTACATGCAGCCGCTCTCTGCTCCCTGCCCCAATGAACATCTGCACTAGGCCCAAGCCT TGGAGTAATTTACCTGAAGAGTGACACCATTGATTTTGAAACTACTGAAGAAACCCAAGACAGCTGAAAACCAGAAGGCATCTGAGGAGA ATGAGATTACTCAGCCGGGTGGATCCAGCGCCAAGCCGGGCCTTCCCTGCCTGAACTTTGAAGCTGTTTTGTCTCCAGACCCAGCCCTCA TCCACTCAACACATTCACTGACAAACTCTCACGCTCACACCGGGTCATCTGATTGTGACATCAGTTGCAAGGGGATGACCGAGCGCATTC ACAGCATCAACCTTCACAACTTCAGCAATTCCGTGCTCGAGACCCTCAACGAGCAGCGCAACCGTGGCCACTTCTGTGACGTAACGGTGC GCATCCACGGGAGCATGCTGCGCGCACACCGCTGCGTGCTGGCAGCCGGCAGCCCCTTCTTCCAGGACAAACTGCTGCTTGGCTACAGCG ACATCGAGATCCCGTCGGTGGTGTCAGTGCAGTCAGTGCAAAAGCTCATTGACTTCATGTACAGCGGCGTGCTACGGGTCTCGCAGTCGG AAGCTCTGCAGATCCTCACGGCCGCCAGCATCCTGCAGATCAAAACAGTCATCGACGAGTGCACGCGCATCGTGTCACAGAACGTGGGCG ATGTGTTCCCGGGGATCCAGGACTCGGGCCAGGACACGCCGCGGGGCACTCCCGAGTCAGGCACGTCAGGCCAGAGCAGCGACACGGAGT CGGGCTACCTGCAGAGCCACCCACAGCACAGCGTGGACAGGATCTACTCGGCACTCTACGCGTGCTCCATGCAGAATGGCAGCGGCGAGC GCTCTTTTTACAGCGGCGCAGTGGTCAGCCACCACGAGACTGCGCTCGGCCTGCCCCGCGACCACCACATGGAAGACCCCAGCTGGATCA CACGCATCCATGAGCGCTCGCAGCAGATGGAGCGCTACCTGTCCACCACCCCCGAGACCACGCACTGCCGCAAGCAGCCCCGGCCTGTGC GCATCCAGACCCTAGTGGGCAACATCCACATCAAGCAGGAGATGGAGGACGATTACGACTACTACGGGCAGCAAAGGGTGCAGATCCTGG AACGCAACGAATCCGAGGAGTGCACGGAAGACACAGACCAGGCCGAGGGCACCGAGAGTGAGCCCAAAGGTGAAAGCTTCGACTCGGGCG TCAGCTCCTCCATAGGCACCGAGCCTGACTCGGTGGAGCAGCAGTTTGGGCCTGGGGCGGCGCGGGACAGCCAGGCTGAACCCACCCAAC CCGAGCAGGCTGCAGAAGCCCCCGCTGAGGGTGGTCCGCAGACAAACCAGCTAGAAACAGGTGCTTCCTCTCCGGAGAGAAGCAATGAAG TGGAGATGGACAGCACTGTTATCACTGTCAGCAACAGCTCCGACAAGAGCGTCCTACAACAGCCTTCGGTCAACACGTCCATCGGGCAGC CATTGCCAAGTACCCAGCTCTACTTACGCCAGACAGAAACCCTCACCAGCAACCTGAGGATGCCTCTGACCTTGACCAGCAACACGCAGG TCATTGGCACAGCTGGCAACACCTACCTGCCAGCCCTCTTCACTACCCAGCCCGCGGGCAGTGGCCCCAAGCCTTTCCTCTTCAGCCTGC CACAGCCCCTGGCAGGCCAGCAGACCCAGTTTGTGACAGTGTCCCAGCCCGGTCTGTCGACCTTTACTGCACAGCTGCCAGCGCCACAGC CCCTGGCCTCATCCGCAGGCCACAGCACAGCCAGTGGGCAAGGCGAAAAAAAGCCTTATGAGTGCACTCTCTGCAACAAGACTTTCACCG CCAAACAGAACTACGTCAAGCACATGTTCGTACACACAGAAGCATCAGATGGTGAAGGAGAAGGAGACACAGAAGTGATGCAGCAGGAGA CAGTTCCAGTTCCTGTACCTTCAGAGAAAACCAAACAGCCTAAAGAATGTTTTTTGATACAACCAAAGGAAAGAAAAGAGAATACCACCA AGACCAGGAAAAGAAGAAAGAAGAAAATTACTGATGTTCTTGCAAAATCAGAACCAAAACCAGGGTTACCTGAAGACCTACAGAAGCTGA TGAAGGACTATTATAGCAGCAGACGCTTGGTGATTGAATTAGAAGAACTGAACCTGCCAGACTCCTGTTTCCTCAAGGCCAATGATTTGA CTCACAGTCTTTCCTCATACCTAAAAGAAATTTGTCCTAAGTGGGTAAAACTTAGGAAGAACCACAGTGAGAAGAAATCGGTCCTGATGC TGATCATCTGCAGCTCGGCCGTCCGAGCCCTGGAGCTCATTAGGTCGATGACAGCATTCAGAGGAGACGGCAAAGTTATAAAATTATTTG CAAAGCACATAAAGGTCCAGGCGCAGGTAAAGTTGCTGGAGAAGCGTGTGGTGCACCTGGGTGTAGGAACTCCGGGGAGAATTAAAGAAC TTGTTAAACAAGGTGGCCTTAATTTGAGCCCCTTAAAATTTCTGGTTTTTGACTGGAACTGGAGAGATCAGAAGTTGAGGAGAATGATGG ACATTCCCGAGATAAGAAAGGAGGTATTCGAACTTCTGGAAATGGGAGTGCTCAGTCTGTGCAAGTCAGAATCCTTGAAACTGGGCCTTT TCTAAGTCTGTGTCCTAATGAAGATTCCAGTTTTCACAGTAGAAGTTGCATCTTATTTAATGACTCTGATACATTGCAAGCACTCAGTAA ATATCAGCAAATAGTTTATGTTAATTGTGTCAACAGATGGATCACTGGAATGTGGGGATTCTGAAACAGAAATGAAACTGTCCTTTTGAC |
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FusionGenePPI for ZBTB20_CMSS1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZBTB20 | NR3C1, PPARG, CHD7, ELAVL1, HSP90AA1, FLNA, MYH9, IQGAP1, SYNPO, LIMA1, ANLN, MYO19 | CMSS1 | SART3, CAND1, S1PR1, GYG1, EGFR, PCDH7, PSME3, MRGBP, MDM2, PEX19, SPANXN3, RPL10, NES, CBX8, FOXI2, FOXL2, FOXS1, PTP4A1, HIST1H1E, HIST1H1T, ACSBG2, FOXA1, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZBTB20_CMSS1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZBTB20_CMSS1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ZBTB20 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
Hgene | ZBTB20 | C0796121 | Primrose syndrome | 1 | CTD_human;ORPHANET;UNIPROT |