	FusionGeneSummary
	FusionProtFeature
	FusionGeneSequence
	FusionGenePPI
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Fusion gene ID: 42438

FusionGeneSummary for YY1AP1_YY1AP1

Fusion gene summary

Fusion gene information	Fusion gene name: YY1AP1_YY1AP1
	Fusion gene ID: 42438
		Hgene	Tgene
	Gene symbol	YY1AP1	YY1AP1
	Gene ID	55249	55249
	Gene name	YY1 associated protein 1	YY1 associated protein 1
	Synonyms	GRNG\|HCCA1\|HCCA2\|YY1AP	GRNG\|HCCA1\|HCCA2\|YY1AP
	Cytomap	1q22	1q22
	Type of gene	protein-coding	protein-coding
	Description	YY1-associated protein 1hepatocellular carcinoma susceptibility proteinhepatocellular carcinoma-associated protein 2	YY1-associated protein 1hepatocellular carcinoma susceptibility proteinhepatocellular carcinoma-associated protein 2
	Modification date	20180523	20180523
	UniProtAcc	Q9H869	Q9H869
	Ensembl transtripts involved in fusion gene	ENST00000311573, ENST00000368340, ENST00000347088, ENST00000361831, ENST00000355499, ENST00000404643, ENST00000407221, ENST00000359205, ENST00000295566, ENST00000368330, ENST00000368339, ENST00000535662, ENST00000405763, ENST00000438245, ENST00000476093,	ENST00000311573, ENST00000368340, ENST00000347088, ENST00000361831, ENST00000355499, ENST00000404643, ENST00000407221, ENST00000359205, ENST00000295566, ENST00000368330, ENST00000368339, ENST00000535662, ENST00000405763, ENST00000438245, ENST00000476093,
Fusion gene scores	* DoF score	7 X 7 X 3=147	5 X 5 X 1=25
	# samples	8	6
	** MAII score	log2(8/147*10)=-0.877744249949002 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(6/25*10)=1.26303440583379 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0
Context	PubMed: YY1AP1 [Title/Abstract] AND YY1AP1 [Title/Abstract] AND fusion [Title/Abstract]
Functional or gene categories assigned by FusionGDB annotation

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner	Gene	GO ID	GO term	PubMed ID
Hgene	YY1AP1	GO:0051726	regulation of cell cycle	17541814
Tgene	YY1AP1	GO:0051726	regulation of cell cycle	17541814

Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Data type	Source	Cancer type	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChiTaRS3.1			BE677820	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-

* LD: Li Ding group's fusion gene list
RV: Roel Verhaak group's fusion gene list
ChiTaRs fusion database

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
intron-3CDS	ENST00000311573	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000311573	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000311573	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000311573	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000311573	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368340	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368340	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368340	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368340	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000347088	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000347088	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000347088	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000347088	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000361831	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000361831	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000361831	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000361831	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000355499	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000355499	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000355499	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000355499	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000404643	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000404643	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000404643	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000404643	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000407221	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000407221	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000407221	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000407221	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000359205	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000359205	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000359205	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000359205	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000295566	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000295566	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000295566	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000295566	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368330	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368330	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368330	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368330	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000368339	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368339	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368339	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000368339	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000535662	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000535662	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000535662	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000535662	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000405763	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000405763	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000405763	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000405763	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000438245	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000438245	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000438245	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000438245	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000311573	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000368340	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000347088	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000361831	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000355499	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000404643	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000407221	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000359205	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000295566	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000368330	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000368339	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-3CDS	ENST00000476093	ENST00000535662	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000476093	ENST00000405763	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000476093	ENST00000438245	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-
intron-intron	ENST00000476093	ENST00000476093	YY1AP1	chr1	155629580	+	YY1AP1	chr1	155630163	-

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FusionProtFeatures for YY1AP1_YY1AP1

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
YY1AP1 Q9H869	YY1AP1 Q9H869

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page
.

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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FusionGeneSequence for YY1AP1_YY1AP1

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for YY1AP1_YY1AP1

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page
.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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RelatedDrugs for YY1AP1_YY1AP1

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for YY1AP1_YY1AP1

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner

Gene

Disease ID

Disease name

# pubmeds

Source

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Statistics

Examples

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Fusion gene ID: 42438

FusionGeneSummary for YY1AP1_YY1AP1

FusionProtFeatures for YY1AP1_YY1AP1

FusionGeneSequence for YY1AP1_YY1AP1

FusionGenePPI for YY1AP1_YY1AP1

RelatedDrugs for YY1AP1_YY1AP1

RelatedDiseases for YY1AP1_YY1AP1