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Fusion gene ID: 42253 |
FusionGeneSummary for XXYLT1_TPRG1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: XXYLT1_TPRG1 | Fusion gene ID: 42253 | Hgene | Tgene | Gene symbol | XXYLT1 | TPRG1 | Gene ID | 152002 | 285386 |
| Gene name | xyloside xylosyltransferase 1 | tumor protein p63 regulated 1 | |
| Synonyms | C3orf21 | FAM79B | |
| Cytomap | 3q29 | 3q28 | |
| Type of gene | protein-coding | protein-coding | |
| Description | xyloside xylosyltransferase 1UDP-xylose:alpha-xyloside alpha-1,3-xylosyltransferase | tumor protein p63-regulated gene 1 proteinfamily with sequence similarity 79, member B | |
| Modification date | 20180519 | 20180403 | |
| UniProtAcc | Q8NBI6 | Q6ZUI0 | |
| Ensembl transtripts involved in fusion gene | ENST00000310380, ENST00000437101, ENST00000429994, ENST00000355729, ENST00000460582, ENST00000356740, | ENST00000433971, ENST00000345063, ENST00000488841, | |
| Fusion gene scores | * DoF score | 8 X 5 X 6=240 | 12 X 6 X 6=432 |
| # samples | 9 | 13 | |
| ** MAII score | log2(9/240*10)=-1.41503749927884 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(13/432*10)=-1.73251968913501 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: XXYLT1 [Title/Abstract] AND TPRG1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | XXYLT1 | GO:0016266 | O-glycan processing | 8982869|22117070 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | LUSC | TCGA-22-4591-01A | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000310380 | ENST00000433971 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| In-frame | ENST00000310380 | ENST00000345063 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| 5CDS-intron | ENST00000310380 | ENST00000488841 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| Frame-shit | ENST00000437101 | ENST00000433971 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| Frame-shit | ENST00000437101 | ENST00000345063 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| 5CDS-intron | ENST00000437101 | ENST00000488841 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| In-frame | ENST00000429994 | ENST00000433971 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| In-frame | ENST00000429994 | ENST00000345063 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| 5CDS-intron | ENST00000429994 | ENST00000488841 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| In-frame | ENST00000355729 | ENST00000433971 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| In-frame | ENST00000355729 | ENST00000345063 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| 5CDS-intron | ENST00000355729 | ENST00000488841 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| intron-3CDS | ENST00000460582 | ENST00000433971 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| intron-3CDS | ENST00000460582 | ENST00000345063 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| intron-intron | ENST00000460582 | ENST00000488841 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| intron-3CDS | ENST00000356740 | ENST00000433971 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| intron-3CDS | ENST00000356740 | ENST00000345063 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
| intron-intron | ENST00000356740 | ENST00000488841 | XXYLT1 | chr3 | 194877178 | - | TPRG1 | chr3 | 189028175 | + |
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FusionProtFeatures for XXYLT1_TPRG1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| XXYLT1 | TPRG1 |
| Alpha-1,3-xylosyltransferase, which elongates the O-linked xylose-glucose disaccharide attached to EGF-like repeats inthe extracellular domain of target proteins by catalyzing theaddition of the second xylose (PubMed:22117070, PubMed:8982869).Known targets include Notch proteins and coagulation factors, suchas F9 (PubMed:22117070, PubMed:8982869).{ECO:0000269|PubMed:22117070, ECO:0000269|PubMed:8982869}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000310380 | - | 3 | 4 | 104_106 | 261 | 394 | Region | UDP-alpha-D-xylose binding |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000310380 | - | 3 | 4 | 1_23 | 261 | 394 | Topological domain | Cytoplasmic |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000355729 | - | 2 | 3 | 1_23 | 58 | 191 | Topological domain | Cytoplasmic |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000437101 | - | 4 | 5 | 1_23 | 58 | 191 | Topological domain | Cytoplasmic |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000310380 | - | 3 | 4 | 24_44 | 261 | 394 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000355729 | - | 2 | 3 | 24_44 | 58 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000437101 | - | 4 | 5 | 24_44 | 58 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000355729 | - | 2 | 3 | 104_106 | 58 | 191 | Region | UDP-alpha-D-xylose binding |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000356740 | - | 1 | 2 | 104_106 | 0 | 188 | Region | UDP-alpha-D-xylose binding |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000437101 | - | 4 | 5 | 104_106 | 58 | 191 | Region | UDP-alpha-D-xylose binding |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000310380 | - | 3 | 4 | 45_393 | 261 | 394 | Topological domain | Lumenal |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000355729 | - | 2 | 3 | 45_393 | 58 | 191 | Topological domain | Lumenal |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000356740 | - | 1 | 2 | 1_23 | 0 | 188 | Topological domain | Cytoplasmic |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000356740 | - | 1 | 2 | 45_393 | 0 | 188 | Topological domain | Lumenal |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000437101 | - | 4 | 5 | 45_393 | 58 | 191 | Topological domain | Lumenal |
| Hgene | >XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000356740 | - | 1 | 2 | 24_44 | 0 | 188 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | TPRG1 | chr3:194877178 | chr3:189028175 | ENST00000345063 | + | 3 | 6 | 68_240 | 159 | 276 | Domain | hSac2 |
| Tgene | TPRG1 | chr3:194877178 | chr3:189028175 | ENST00000433971 | + | 8 | 11 | 68_240 | 159 | 276 | Domain | hSac2 |
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FusionGeneSequence for XXYLT1_TPRG1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_XXYLT1_ENST00000310380_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_378aa MGLLRGGLPCARAMARLGAVRSHYCALLLAAALAVCAFYYLGSGRETFSSATKRLKEARAGAPAAPSPPALELARGSVAPAPGAKAKSLE GGGAGPVDYHLLMMFTKAEHNAALQAKARVALRSLLRLAKFEAHEVLNLHFVSEEASREVAKGLLRELLPPAAGFKCKVIFHDVAVLTDK LFPIVEAMQKHFSAGLGTYYSDSIFFLSVAMHQIMPKEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRRQGEGLRI YWGSPEEQSLLSRWNPWSTEVPTATFTEHPMKYTSEKFLEICKLSGFMSKLVPAIQNAHKNSTGSGRGKKLMVLTEPILIETYTGLMSFI >In-frame_XXYLT1_ENST00000310380_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_378aa MGLLRGGLPCARAMARLGAVRSHYCALLLAAALAVCAFYYLGSGRETFSSATKRLKEARAGAPAAPSPPALELARGSVAPAPGAKAKSLE GGGAGPVDYHLLMMFTKAEHNAALQAKARVALRSLLRLAKFEAHEVLNLHFVSEEASREVAKGLLRELLPPAAGFKCKVIFHDVAVLTDK LFPIVEAMQKHFSAGLGTYYSDSIFFLSVAMHQIMPKEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRRQGEGLRI YWGSPEEQSLLSRWNPWSTEVPTATFTEHPMKYTSEKFLEICKLSGFMSKLVPAIQNAHKNSTGSGRGKKLMVLTEPILIETYTGLMSFI >In-frame_XXYLT1_ENST00000429994_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_232aa MVRCVPSAVIVCFLRPPQPGRTVIFHDVAVLTDKLFPIVEAMQKHFSAGLGTYYSDSIFFLSVAMHQIMPKEILQIIQLDLDLKFKTNIR ELFEEFDSFLPGAIIGIAREMQPVYRRQGEGLRIYWGSPEEQSLLSRWNPWSTEVPTATFTEHPMKYTSEKFLEICKLSGFMSKLVPAIQ >In-frame_XXYLT1_ENST00000429994_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_232aa MVRCVPSAVIVCFLRPPQPGRTVIFHDVAVLTDKLFPIVEAMQKHFSAGLGTYYSDSIFFLSVAMHQIMPKEILQIIQLDLDLKFKTNIR ELFEEFDSFLPGAIIGIAREMQPVYRRQGEGLRIYWGSPEEQSLLSRWNPWSTEVPTATFTEHPMKYTSEKFLEICKLSGFMSKLVPAIQ >In-frame_XXYLT1_ENST00000355729_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_175aa MWPPRCKDPGRQSAEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRRQGEGLRIYWGSPEEQSLLSRWNPWSTEVPT >In-frame_XXYLT1_ENST00000355729_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_175aa MWPPRCKDPGRQSAEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYRRQGEGLRIYWGSPEEQSLLSRWNPWSTEVPT |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_XXYLT1_ENST00000310380_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_1134nt ATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTACTGCGCCCTGCTGCTGGCC GCGGCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCC GGGGCTCCCGCCGCGCCCTCGCCGCCCGCGCTGGAGCTAGCGCGGGGCTCCGTGGCGCCAGCCCCCGGCGCGAAGGCCAAGAGCTTGGAG GGCGGCGGTGCCGGGCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTC GCGCTGCGCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGAGGCCAGCCGCGAGGTG GCCAAGGGCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCTGGCTTCAAGTGCAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAG CTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCC ATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAG GAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACAAGGAGAAGGCCTTAGGATC TACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGCTACTTTCACTGAGCATCCT ATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGCTATCCAGAATGCCCACAAG AATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACACAGGGCTGATGTCATTCATT >In-frame_XXYLT1_ENST00000310380_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_1134nt ATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTACTGCGCCCTGCTGCTGGCC GCGGCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAGGCTGAAGGAGGCCCGCGCC GGGGCTCCCGCCGCGCCCTCGCCGCCCGCGCTGGAGCTAGCGCGGGGCTCCGTGGCGCCAGCCCCCGGCGCGAAGGCCAAGAGCTTGGAG GGCGGCGGTGCCGGGCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCTGCAGGCCAAGGCCCGCGTC GCGCTGCGCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGAGGAGGCCAGCCGCGAGGTG GCCAAGGGCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCTGGCTTCAAGTGCAAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAG CTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCC ATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAG GAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACAAGGAGAAGGCCTTAGGATC TACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGCTACTTTCACTGAGCATCCT ATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGCTATCCAGAATGCCCACAAG AATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACACAGGGCTGATGTCATTCATT >In-frame_XXYLT1_ENST00000429994_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_696nt ATGGTGAGATGTGTCCCTTCCGCCGTGATTGTGTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTG CTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTC CTCTCGGTCGCCATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGG GAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACAAGGAGAA GGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGCTACTTTC ACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGCTATCCAG AATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACACAGGGCTG >In-frame_XXYLT1_ENST00000429994_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_696nt ATGGTGAGATGTGTCCCTTCCGCCGTGATTGTGTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTG CTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTC CTCTCGGTCGCCATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGG GAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACAAGGAGAA GGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGCTACTTTC ACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGCTATCCAG AATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACACAGGGCTG >In-frame_XXYLT1_ENST00000355729_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_525nt ATGTGGCCACCTCGCTGCAAGGATCCAGGAAGGCAGAGTGCGGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACC AACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGA CAAGGAGAAGGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTAT GCTACTTTCACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCA GCTATCCAGAATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTAC >In-frame_XXYLT1_ENST00000355729_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_525nt ATGTGGCCACCTCGCTGCAAGGATCCAGGAAGGCAGAGTGCGGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACC AACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGA CAAGGAGAAGGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTAT GCTACTTTCACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCA GCTATCCAGAATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTAC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_XXYLT1_ENST00000310380_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_1484nt CCCCTTTCATGGCCGCCGCCTGGCGCCGGGGCTAAGTGGCCGCCGGCGTCCGGGTACCCGAGGGCTCTCCCGCGTTGCTGGCACCGCTGG CGCCGCGGTCTCGTAGCGCATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTA CTGCGCCCTGCTGCTGGCCGCGGCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAG GCTGAAGGAGGCCCGCGCCGGGGCTCCCGCCGCGCCCTCGCCGCCCGCGCTGGAGCTAGCGCGGGGCTCCGTGGCGCCAGCCCCCGGCGC GAAGGCCAAGAGCTTGGAGGGCGGCGGTGCCGGGCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCT GCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGA GGAGGCCAGCCGCGAGGTGGCCAAGGGCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCTGGCTTCAAGTGCAAGGTCATCTTCCACGATGT TGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCAT CTTCTTCCTCTCGGTCGCCATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAA CATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACA AGGAGAAGGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGC TACTTTCACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGC TATCCAGAATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACAC AGGGCTGATGTCATTCATTGGAAACCGCAACAAACTTGGCTATTCCCTTGCCCGTGGGAGTATTGGTTTTTGAGAGTCTTTTTGGTACCA TAAGCATATCATCCACAGATATGTCACTTTGAAAATTCCAGTTTGACCCACGCTATTTTTGGACTGAAACAATTAATTATTTTTAAATGA CGCTTTATGATTTAGAAATTTAGTATTTCCGAAAATTTAAAAGCTTGATTGGACTGATAGATACACACTTTAGACCTCATACAAGAATAA >In-frame_XXYLT1_ENST00000310380_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_5727nt CCCCTTTCATGGCCGCCGCCTGGCGCCGGGGCTAAGTGGCCGCCGGCGTCCGGGTACCCGAGGGCTCTCCCGCGTTGCTGGCACCGCTGG CGCCGCGGTCTCGTAGCGCATGGGCCTCCTCCGAGGCGGGCTCCCATGCGCTCGGGCCATGGCGCGCCTGGGCGCTGTGCGCTCCCACTA CTGCGCCCTGCTGCTGGCCGCGGCGCTGGCCGTCTGCGCCTTCTACTACCTCGGCTCAGGCCGGGAGACCTTCTCCAGCGCCACCAAGAG GCTGAAGGAGGCCCGCGCCGGGGCTCCCGCCGCGCCCTCGCCGCCCGCGCTGGAGCTAGCGCGGGGCTCCGTGGCGCCAGCCCCCGGCGC GAAGGCCAAGAGCTTGGAGGGCGGCGGTGCCGGGCCGGTGGACTACCACCTGCTGATGATGTTCACCAAGGCGGAGCACAATGCCGCGCT GCAGGCCAAGGCCCGCGTCGCGCTGCGCTCACTGCTGCGCCTCGCCAAGTTCGAGGCGCACGAGGTGCTTAACCTTCACTTCGTGAGCGA GGAGGCCAGCCGCGAGGTGGCCAAGGGCCTGCTGCGGGAGCTCCTGCCGCCCGCCGCTGGCTTCAAGTGCAAGGTCATCTTCCACGATGT TGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCAT CTTCTTCCTCTCGGTCGCCATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAA CATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACA AGGAGAAGGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGC TACTTTCACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGC TATCCAGAATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACAC AGGGCTGATGTCATTCATTGGAAACCGCAACAAACTTGGCTATTCCCTTGCCCGTGGGAGTATTGGTTTTTGAGAGTCTTTTTGGTACCA TAAGCATATCATCCACAGATATGTCACTTTGAAAATTCCAGTTTGACCCACGCTATTTTTGGACTGAAACAATTAATTATTTTTAAATGA CGCTTTATGATTTAGAAATTTAGTATTTCCGAAAATTTAAAAGCTTGATTGGACTGATAGATACACACTTTAGACCTCATACAAGAATAA TCAAATTTTCTTAAAACTAGAAAATAAATGCTGCTGAGCCTATCAAATACTGTTATCAAATGAGTGCCTGATCATCAACTCAGGAAAGAA GACTCTAAGTCCTGTTGCTTCAGCTCTCTAAATGTAGGCTTTTTTTTTTTTTTTTTTTTAGGTCTTGGTCTTCAGCCCTCTTATCCTGAT TTATTCTCTCATTGGGGTCTCACTGTCTCTAGTATTTTAGCTACCACTTGATAAGGATGACTTCCAAATTTATATTCCCATTCCCAATAT TTATTCCAAGACTCAGTTTTGCATTTCTGACTGCTAATCATCTATATATCAGTGTCCCAGTGGCCTCTTAATTGAGCATTATCAAAATCC TGTGGTATTTATATGGTCCCAGTTATCCATCCCTGAAGTCTGTCAATTTTGATTTCTCTAAATTCCTTGCCATGACATCCTATATATGAT CACATCTCTATACGGCTTAGCATTGTATTCCGATGCCCAGATGTCAAACTTGAAGCTCATTCTCTTATCAAAATTGTTCATGTATTCCTC CTTTCCATTCTTATAGCTGTATTATTAGATCAGGTTTTTAATTCTGCTCAACCAATTATTACCACAGCCTGTTAAATGGAATCCCTACTC CAAGGCTGACTGTTTCAATCTATCCTACACTTGGTTTCTAGCTCATTTACTTATACCATCTTTTGTTCAAATATATATTTTTTAATAACA GACCTTTTTCTTCTAAAGAAATCTTTTGTAGAAGCAGCATATACGAAGCAGATAAAAGTAGGTTCAATGCGGTTGGAGTGAAGATGAGAA TGCCACAGGCATCTTTCTTTCTAGGCCTCAGAGGTGCTGCATATGGAATGTCCATGGATCGCAGAGGGTTTTGAAGACCATGTTTTCAAA AACACTGTCTTAACACTCTATTGTCATTGCTCTTTTCCCTCTTATTTCCTCTTTGTCTCTTCCCGACTTAGATCTAATTTTCAACAACCC AGGAAATTATCTCATATGTTTGCATCTCTCAAGTTTCTTTTCTTTTTTCTTTCAGAGTCTTATTTTATCTAAATTTATGTAGAAAAAAAA GCTTTGAATGTTGACTACATAGACATTACTACAATAAGCTTTTTGCCTTTCCCAAGACTCAAAATTGACACATCTTTGTTGATGTTTAAG TTGAAATTCCAGCCAACTTTTTTTTGACTTTTATGTGAAGTTTAAAGTCTTTTCTTTGAAAAGCTTGCTTCCTCAATTTCAAAGATTTGT CCTCTGATATATTTATAAACATCAATTTAATGCAGACATTCAAACCCTAAACCTTGAATAACTCTTATTTTATTTTGTCTTTGTTTACTT CCATTAATTTTTTTTTCTTTCCCTCTCTTCCGCCTTTACAGCACCCACTTTTTCTTCCCCCCATGATGGCAAATATTGTTATAGTCCCCA AGGCAGGGAACTTCTATTCAGACTGTAAAAGGAAATGTTGAAATCCATAGCTGTCCTGTCAACAGTAGTGGAATGAAAAGTCGTTGGATT GTTTTGGCACTGGTTCTGAAGCAGGCATAATTGGCAAATTATTATAATACTGCTGCCCGAAAATCCCCATTTGCCTCAAGATAGTGGCAT TTATTGGCAGAAGCCTCTGAAATGTCCAGCACATTCTTTTGAGTTACCATTTAAGGATCAGCCTGACAATCGACTTCTCTCTGCACATTT GCCCCCTTTGTAACCTAAGCCAGACTGTTCCCAAATGACCTTCTAAAGGACACAGTGCACCATCATCAATGGAAACAGTTCAGAAAGGAT GACAGGAGGGAGATGTTTCTTAGTTCTGAGAGCCAGTCTGTAACAATGGGATAAGCATTTAATGGAATCAAAGCTGTTTTGCATAAAGAG TGAACTCAGAGACGACAAGAGGGTCTTTATGAATTCCCTTCACATTTTGTAAAAACTGTCATATATAGGCTATCCCCTTAATTGATAAAT GGGATCTAGAAAGCGGTATTATGACCAGAGGGTGAGAAGATTTAGGAATTTGGATAGCAGTTCAAGATAAGAAAGAACTTCTTATAGTTA TAAATTTTCAATGATGGAATGGGTTGCTTCTTTAAACAGTGAGCCCACCATCACTTGGTATGTTCAAGGAAAGACTAGATAAAGTCGATA TTGTGAGAGGAATTGCTGTATGATACCGTTTGGAGAAATGATTGACATAATCTTTTAAGGCCGGTGACCCTATCATTTTCCAAATAATTG TTGCTAGTACTTAGTTAATTAGACCCATTTTTTTCTTAGGAAAGAGTTGGATCAATCATGGGAGACCCTGAAAAATTTCCTTACCTTTCC TAAGGTTTAATTTCCTCTTCTGCGAAATGGAGACAATTATATTACTTTTGCTTATTTCATAAAGATCTTGTGAGGATTCAATGAAATGAG GTTAAATTCTTTTATTAAACAGAAAGTTTTGAGTATTTGCCTAGAGAGTGATGTGACTTTTGCAGCAGAAGGTGGGAAAACATCCAAGGG AACTACATTTCCTCCAGAAATTGTTTCTTCATTACCATCGACCTACTGATTATGGTTTTCTCATTTTACACTTGGTGTTCTTACTTGGGA TCTTTGTCCTTAAGCTCAACAGGGAGCCACAACCCAGGGGACCTATGTGTACACTTGGAGTTTTTATCAGACTATCATTTGAACTTACCA CTACAGTTTAGCAAATGGCATGATGAGTTTGATTGATAATAGGAGTAGACGCAAGATACATTAAGTAGAGTACAAAGCATTTCATAACCA AAATGTCATGGTTGGAGGTCTTCATTATTCGGTCTTTATCTCATTCAGGAATTTCCACTTGAAAAATCTCTGATAAGCTTTATTTCAGAA ACTGCTTGAACAGCTCCACTGACAAATGCCTCACTATCTTCTGATACATCGTAGGCAGTTCTGAGGGTGAGAAAGTTCAAAGCAGATAGA TGTTTTAACACAACAGGAGGACTTTTAAACAATCACCAGGACTCACTCCTCGGTGGTCAATTGGGCCTGTTTGGAGGCCTGACCTTTGGT CATCTTAAGGTCATCTAAGGCAGAAAAGAGAAGCTCACTTATAAGTTGGCACTTCTGAATCATTTGCCTTGAGGTCCATTTTTTATTCAG CCTTTGTTTAAACCTTCTTAGGAAGCCAGTTTGTAGAGTTCTGGGGATAAGAAGGCAGAAAAACCATGTCAATTCAGTGCTTTTATTTCA CAGAAAATGAAGCAAAGGCCTAGAAACTAGAAAGACATTTCTCAAAAAGAAGATGGTGAACTTTTGGAAATACTGAGATTAGACTACATT TTCCAATTTCTATCCCTAGCCCACTGCTCTTTCCAATATAATATCTGTATTCCATGGGAAAGACATGCCATCTGAATTGATGTATCGTAG TTGTTGAGATAATTTTGAAATGAGAAAACAATAGGGCACAGTCGTTTGGGAAGAATTTCCAGAAATTGCCATCATTTTCTTAAAGGCTAA GGACACTTATAGAGCTCTCCGATTTCCTATCTGATAAAAAAAGCCCAAACAAAGCTGCGGAAGCTGGCAGAGCCAGCAGATATTTTGTAA GGCAGCTTCACCTCTGCTGGCATTTTGTGGGGCAGGAGAGGGGGAGGGCAAAGGTATTAAATTTAGGCTTAAAAGCTCCTCAGAAATTCT TTACACACAAGAGACCAAGTTGGAGAAAAGAAGATGACTTGTGCCAAGGGGAAGAAAGAGAGAGACTAATGCCTGTGGTTTTCAAAGGTT AACAACAACATAAAAAAGCCAAGGTATTTGCACAGGGATGAATGCTCATTGGCTCTTGGCCAACAATTATACAAGGGCTTGTGCCCACAT CCTGTAGCTGTGGTTTAGGGACGCTGCTCATGAGTGACTTCTTATGCTTAGTGGCAGGAAACTTTAGTCACTGATGTGTAAACTCACCTT TGGTCTGCACCTCCCACAACGTGCTCCGAAAGCAGTTAGGGGACTAGGCCTCTTGATTTCCTTGTAGATACCAGTTCCCCAGAAGCTAAG GAAAAACTCTGAGGCCTTGGAGTTACTGAGAGTGGACCAATACTTGTCTTATTCTACCTGATTTTGGCAACTGCTTAGGGTTCTTCTGTA TCCACAAAAAGGAATTATGATATCCTCTGCTAAACCCTCTCTTTAGCCTCAAAGCCCAAGACCAAAAAAAATGAGCCATATTTCATTGCA >In-frame_XXYLT1_ENST00000429994_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_1020nt GTGAGAGTCAGTGAGCTCTCAGGAGATCTGCTGTTTGAAAGTGTGTAGCGCTTCCCCCTTCTCTCTCTCTGTCCTGCTGCACTATGGTGA GATGTGTCCCTTCCGCCGTGATTGTGTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCTGACGG ATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGG TCGCCATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGT TTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACAAGGAGAAGGCCTTA GGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGCTACTTTCACTGAGC ATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGCTATCCAGAATGCCC ACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACACAGGGCTGATGTCAT TCATTGGAAACCGCAACAAACTTGGCTATTCCCTTGCCCGTGGGAGTATTGGTTTTTGAGAGTCTTTTTGGTACCATAAGCATATCATCC ACAGATATGTCACTTTGAAAATTCCAGTTTGACCCACGCTATTTTTGGACTGAAACAATTAATTATTTTTAAATGACGCTTTATGATTTA GAAATTTAGTATTTCCGAAAATTTAAAAGCTTGATTGGACTGATAGATACACACTTTAGACCTCATACAAGAATAATCAAATTTTCTTAA >In-frame_XXYLT1_ENST00000429994_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_5263nt GTGAGAGTCAGTGAGCTCTCAGGAGATCTGCTGTTTGAAAGTGTGTAGCGCTTCCCCCTTCTCTCTCTCTGTCCTGCTGCACTATGGTGA GATGTGTCCCTTCCGCCGTGATTGTGTGTTTCCTGAGGCCTCCCCAGCCAGGCAGAACTGTCATCTTCCACGATGTTGCTGTGCTGACGG ATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGG TCGCCATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGT TTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGACAAGGAGAAGGCCTTA GGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTATGCTACTTTCACTGAGC ATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCAGCTATCCAGAATGCCC ACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTACACAGGGCTGATGTCAT TCATTGGAAACCGCAACAAACTTGGCTATTCCCTTGCCCGTGGGAGTATTGGTTTTTGAGAGTCTTTTTGGTACCATAAGCATATCATCC ACAGATATGTCACTTTGAAAATTCCAGTTTGACCCACGCTATTTTTGGACTGAAACAATTAATTATTTTTAAATGACGCTTTATGATTTA GAAATTTAGTATTTCCGAAAATTTAAAAGCTTGATTGGACTGATAGATACACACTTTAGACCTCATACAAGAATAATCAAATTTTCTTAA AACTAGAAAATAAATGCTGCTGAGCCTATCAAATACTGTTATCAAATGAGTGCCTGATCATCAACTCAGGAAAGAAGACTCTAAGTCCTG TTGCTTCAGCTCTCTAAATGTAGGCTTTTTTTTTTTTTTTTTTTTAGGTCTTGGTCTTCAGCCCTCTTATCCTGATTTATTCTCTCATTG GGGTCTCACTGTCTCTAGTATTTTAGCTACCACTTGATAAGGATGACTTCCAAATTTATATTCCCATTCCCAATATTTATTCCAAGACTC AGTTTTGCATTTCTGACTGCTAATCATCTATATATCAGTGTCCCAGTGGCCTCTTAATTGAGCATTATCAAAATCCTGTGGTATTTATAT GGTCCCAGTTATCCATCCCTGAAGTCTGTCAATTTTGATTTCTCTAAATTCCTTGCCATGACATCCTATATATGATCACATCTCTATACG GCTTAGCATTGTATTCCGATGCCCAGATGTCAAACTTGAAGCTCATTCTCTTATCAAAATTGTTCATGTATTCCTCCTTTCCATTCTTAT AGCTGTATTATTAGATCAGGTTTTTAATTCTGCTCAACCAATTATTACCACAGCCTGTTAAATGGAATCCCTACTCCAAGGCTGACTGTT TCAATCTATCCTACACTTGGTTTCTAGCTCATTTACTTATACCATCTTTTGTTCAAATATATATTTTTTAATAACAGACCTTTTTCTTCT AAAGAAATCTTTTGTAGAAGCAGCATATACGAAGCAGATAAAAGTAGGTTCAATGCGGTTGGAGTGAAGATGAGAATGCCACAGGCATCT TTCTTTCTAGGCCTCAGAGGTGCTGCATATGGAATGTCCATGGATCGCAGAGGGTTTTGAAGACCATGTTTTCAAAAACACTGTCTTAAC ACTCTATTGTCATTGCTCTTTTCCCTCTTATTTCCTCTTTGTCTCTTCCCGACTTAGATCTAATTTTCAACAACCCAGGAAATTATCTCA TATGTTTGCATCTCTCAAGTTTCTTTTCTTTTTTCTTTCAGAGTCTTATTTTATCTAAATTTATGTAGAAAAAAAAGCTTTGAATGTTGA CTACATAGACATTACTACAATAAGCTTTTTGCCTTTCCCAAGACTCAAAATTGACACATCTTTGTTGATGTTTAAGTTGAAATTCCAGCC AACTTTTTTTTGACTTTTATGTGAAGTTTAAAGTCTTTTCTTTGAAAAGCTTGCTTCCTCAATTTCAAAGATTTGTCCTCTGATATATTT ATAAACATCAATTTAATGCAGACATTCAAACCCTAAACCTTGAATAACTCTTATTTTATTTTGTCTTTGTTTACTTCCATTAATTTTTTT TTCTTTCCCTCTCTTCCGCCTTTACAGCACCCACTTTTTCTTCCCCCCATGATGGCAAATATTGTTATAGTCCCCAAGGCAGGGAACTTC TATTCAGACTGTAAAAGGAAATGTTGAAATCCATAGCTGTCCTGTCAACAGTAGTGGAATGAAAAGTCGTTGGATTGTTTTGGCACTGGT TCTGAAGCAGGCATAATTGGCAAATTATTATAATACTGCTGCCCGAAAATCCCCATTTGCCTCAAGATAGTGGCATTTATTGGCAGAAGC CTCTGAAATGTCCAGCACATTCTTTTGAGTTACCATTTAAGGATCAGCCTGACAATCGACTTCTCTCTGCACATTTGCCCCCTTTGTAAC CTAAGCCAGACTGTTCCCAAATGACCTTCTAAAGGACACAGTGCACCATCATCAATGGAAACAGTTCAGAAAGGATGACAGGAGGGAGAT GTTTCTTAGTTCTGAGAGCCAGTCTGTAACAATGGGATAAGCATTTAATGGAATCAAAGCTGTTTTGCATAAAGAGTGAACTCAGAGACG ACAAGAGGGTCTTTATGAATTCCCTTCACATTTTGTAAAAACTGTCATATATAGGCTATCCCCTTAATTGATAAATGGGATCTAGAAAGC GGTATTATGACCAGAGGGTGAGAAGATTTAGGAATTTGGATAGCAGTTCAAGATAAGAAAGAACTTCTTATAGTTATAAATTTTCAATGA TGGAATGGGTTGCTTCTTTAAACAGTGAGCCCACCATCACTTGGTATGTTCAAGGAAAGACTAGATAAAGTCGATATTGTGAGAGGAATT GCTGTATGATACCGTTTGGAGAAATGATTGACATAATCTTTTAAGGCCGGTGACCCTATCATTTTCCAAATAATTGTTGCTAGTACTTAG TTAATTAGACCCATTTTTTTCTTAGGAAAGAGTTGGATCAATCATGGGAGACCCTGAAAAATTTCCTTACCTTTCCTAAGGTTTAATTTC CTCTTCTGCGAAATGGAGACAATTATATTACTTTTGCTTATTTCATAAAGATCTTGTGAGGATTCAATGAAATGAGGTTAAATTCTTTTA TTAAACAGAAAGTTTTGAGTATTTGCCTAGAGAGTGATGTGACTTTTGCAGCAGAAGGTGGGAAAACATCCAAGGGAACTACATTTCCTC CAGAAATTGTTTCTTCATTACCATCGACCTACTGATTATGGTTTTCTCATTTTACACTTGGTGTTCTTACTTGGGATCTTTGTCCTTAAG CTCAACAGGGAGCCACAACCCAGGGGACCTATGTGTACACTTGGAGTTTTTATCAGACTATCATTTGAACTTACCACTACAGTTTAGCAA ATGGCATGATGAGTTTGATTGATAATAGGAGTAGACGCAAGATACATTAAGTAGAGTACAAAGCATTTCATAACCAAAATGTCATGGTTG GAGGTCTTCATTATTCGGTCTTTATCTCATTCAGGAATTTCCACTTGAAAAATCTCTGATAAGCTTTATTTCAGAAACTGCTTGAACAGC TCCACTGACAAATGCCTCACTATCTTCTGATACATCGTAGGCAGTTCTGAGGGTGAGAAAGTTCAAAGCAGATAGATGTTTTAACACAAC AGGAGGACTTTTAAACAATCACCAGGACTCACTCCTCGGTGGTCAATTGGGCCTGTTTGGAGGCCTGACCTTTGGTCATCTTAAGGTCAT CTAAGGCAGAAAAGAGAAGCTCACTTATAAGTTGGCACTTCTGAATCATTTGCCTTGAGGTCCATTTTTTATTCAGCCTTTGTTTAAACC TTCTTAGGAAGCCAGTTTGTAGAGTTCTGGGGATAAGAAGGCAGAAAAACCATGTCAATTCAGTGCTTTTATTTCACAGAAAATGAAGCA AAGGCCTAGAAACTAGAAAGACATTTCTCAAAAAGAAGATGGTGAACTTTTGGAAATACTGAGATTAGACTACATTTTCCAATTTCTATC CCTAGCCCACTGCTCTTTCCAATATAATATCTGTATTCCATGGGAAAGACATGCCATCTGAATTGATGTATCGTAGTTGTTGAGATAATT TTGAAATGAGAAAACAATAGGGCACAGTCGTTTGGGAAGAATTTCCAGAAATTGCCATCATTTTCTTAAAGGCTAAGGACACTTATAGAG CTCTCCGATTTCCTATCTGATAAAAAAAGCCCAAACAAAGCTGCGGAAGCTGGCAGAGCCAGCAGATATTTTGTAAGGCAGCTTCACCTC TGCTGGCATTTTGTGGGGCAGGAGAGGGGGAGGGCAAAGGTATTAAATTTAGGCTTAAAAGCTCCTCAGAAATTCTTTACACACAAGAGA CCAAGTTGGAGAAAAGAAGATGACTTGTGCCAAGGGGAAGAAAGAGAGAGACTAATGCCTGTGGTTTTCAAAGGTTAACAACAACATAAA AAAGCCAAGGTATTTGCACAGGGATGAATGCTCATTGGCTCTTGGCCAACAATTATACAAGGGCTTGTGCCCACATCCTGTAGCTGTGGT TTAGGGACGCTGCTCATGAGTGACTTCTTATGCTTAGTGGCAGGAAACTTTAGTCACTGATGTGTAAACTCACCTTTGGTCTGCACCTCC CACAACGTGCTCCGAAAGCAGTTAGGGGACTAGGCCTCTTGATTTCCTTGTAGATACCAGTTCCCCAGAAGCTAAGGAAAAACTCTGAGG CCTTGGAGTTACTGAGAGTGGACCAATACTTGTCTTATTCTACCTGATTTTGGCAACTGCTTAGGGTTCTTCTGTATCCACAAAAAGGAA TTATGATATCCTCTGCTAAACCCTCTCTTTAGCCTCAAAGCCCAAGACCAAAAAAAATGAGCCATATTTCATTGCAGGCCTGCTGCCAAT >In-frame_XXYLT1_ENST00000355729_chr3_194877178_-_TPRG1_ENST00000433971_chr3_189028175_+_766nt ATGTGGCCACCTCGCTGCAAGGATCCAGGAAGGCAGAGTGCGGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACC AACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGA CAAGGAGAAGGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTAT GCTACTTTCACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCA GCTATCCAGAATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTAC ACAGGGCTGATGTCATTCATTGGAAACCGCAACAAACTTGGCTATTCCCTTGCCCGTGGGAGTATTGGTTTTTGAGAGTCTTTTTGGTAC CATAAGCATATCATCCACAGATATGTCACTTTGAAAATTCCAGTTTGACCCACGCTATTTTTGGACTGAAACAATTAATTATTTTTAAAT GACGCTTTATGATTTAGAAATTTAGTATTTCCGAAAATTTAAAAGCTTGATTGGACTGATAGATACACACTTTAGACCTCATACAAGAAT >In-frame_XXYLT1_ENST00000355729_chr3_194877178_-_TPRG1_ENST00000345063_chr3_189028175_+_5009nt ATGTGGCCACCTCGCTGCAAGGATCCAGGAAGGCAGAGTGCGGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACC AACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGAGA CAAGGAGAAGGCCTTAGGATCTACTGGGGGAGTCCGGAGGAGCAGTCTCTTCTGTCCCGCTGGAACCCATGGTCCACTGAAGTTCCTTAT GCTACTTTCACTGAGCATCCTATGAAATACACCAGTGAGAAATTCCTTGAAATTTGCAAGTTGTCTGGGTTCATGTCTAAGCTTGTTCCA GCTATCCAGAATGCCCACAAGAATTCAACTGGATCTGGAAGAGGAAAGAAACTGATGGTGTTAACTGAACCCATTTTGATTGAGACCTAC ACAGGGCTGATGTCATTCATTGGAAACCGCAACAAACTTGGCTATTCCCTTGCCCGTGGGAGTATTGGTTTTTGAGAGTCTTTTTGGTAC CATAAGCATATCATCCACAGATATGTCACTTTGAAAATTCCAGTTTGACCCACGCTATTTTTGGACTGAAACAATTAATTATTTTTAAAT GACGCTTTATGATTTAGAAATTTAGTATTTCCGAAAATTTAAAAGCTTGATTGGACTGATAGATACACACTTTAGACCTCATACAAGAAT AATCAAATTTTCTTAAAACTAGAAAATAAATGCTGCTGAGCCTATCAAATACTGTTATCAAATGAGTGCCTGATCATCAACTCAGGAAAG AAGACTCTAAGTCCTGTTGCTTCAGCTCTCTAAATGTAGGCTTTTTTTTTTTTTTTTTTTTAGGTCTTGGTCTTCAGCCCTCTTATCCTG ATTTATTCTCTCATTGGGGTCTCACTGTCTCTAGTATTTTAGCTACCACTTGATAAGGATGACTTCCAAATTTATATTCCCATTCCCAAT ATTTATTCCAAGACTCAGTTTTGCATTTCTGACTGCTAATCATCTATATATCAGTGTCCCAGTGGCCTCTTAATTGAGCATTATCAAAAT CCTGTGGTATTTATATGGTCCCAGTTATCCATCCCTGAAGTCTGTCAATTTTGATTTCTCTAAATTCCTTGCCATGACATCCTATATATG ATCACATCTCTATACGGCTTAGCATTGTATTCCGATGCCCAGATGTCAAACTTGAAGCTCATTCTCTTATCAAAATTGTTCATGTATTCC TCCTTTCCATTCTTATAGCTGTATTATTAGATCAGGTTTTTAATTCTGCTCAACCAATTATTACCACAGCCTGTTAAATGGAATCCCTAC TCCAAGGCTGACTGTTTCAATCTATCCTACACTTGGTTTCTAGCTCATTTACTTATACCATCTTTTGTTCAAATATATATTTTTTAATAA CAGACCTTTTTCTTCTAAAGAAATCTTTTGTAGAAGCAGCATATACGAAGCAGATAAAAGTAGGTTCAATGCGGTTGGAGTGAAGATGAG AATGCCACAGGCATCTTTCTTTCTAGGCCTCAGAGGTGCTGCATATGGAATGTCCATGGATCGCAGAGGGTTTTGAAGACCATGTTTTCA AAAACACTGTCTTAACACTCTATTGTCATTGCTCTTTTCCCTCTTATTTCCTCTTTGTCTCTTCCCGACTTAGATCTAATTTTCAACAAC CCAGGAAATTATCTCATATGTTTGCATCTCTCAAGTTTCTTTTCTTTTTTCTTTCAGAGTCTTATTTTATCTAAATTTATGTAGAAAAAA AAGCTTTGAATGTTGACTACATAGACATTACTACAATAAGCTTTTTGCCTTTCCCAAGACTCAAAATTGACACATCTTTGTTGATGTTTA AGTTGAAATTCCAGCCAACTTTTTTTTGACTTTTATGTGAAGTTTAAAGTCTTTTCTTTGAAAAGCTTGCTTCCTCAATTTCAAAGATTT GTCCTCTGATATATTTATAAACATCAATTTAATGCAGACATTCAAACCCTAAACCTTGAATAACTCTTATTTTATTTTGTCTTTGTTTAC TTCCATTAATTTTTTTTTCTTTCCCTCTCTTCCGCCTTTACAGCACCCACTTTTTCTTCCCCCCATGATGGCAAATATTGTTATAGTCCC CAAGGCAGGGAACTTCTATTCAGACTGTAAAAGGAAATGTTGAAATCCATAGCTGTCCTGTCAACAGTAGTGGAATGAAAAGTCGTTGGA TTGTTTTGGCACTGGTTCTGAAGCAGGCATAATTGGCAAATTATTATAATACTGCTGCCCGAAAATCCCCATTTGCCTCAAGATAGTGGC ATTTATTGGCAGAAGCCTCTGAAATGTCCAGCACATTCTTTTGAGTTACCATTTAAGGATCAGCCTGACAATCGACTTCTCTCTGCACAT TTGCCCCCTTTGTAACCTAAGCCAGACTGTTCCCAAATGACCTTCTAAAGGACACAGTGCACCATCATCAATGGAAACAGTTCAGAAAGG ATGACAGGAGGGAGATGTTTCTTAGTTCTGAGAGCCAGTCTGTAACAATGGGATAAGCATTTAATGGAATCAAAGCTGTTTTGCATAAAG AGTGAACTCAGAGACGACAAGAGGGTCTTTATGAATTCCCTTCACATTTTGTAAAAACTGTCATATATAGGCTATCCCCTTAATTGATAA ATGGGATCTAGAAAGCGGTATTATGACCAGAGGGTGAGAAGATTTAGGAATTTGGATAGCAGTTCAAGATAAGAAAGAACTTCTTATAGT TATAAATTTTCAATGATGGAATGGGTTGCTTCTTTAAACAGTGAGCCCACCATCACTTGGTATGTTCAAGGAAAGACTAGATAAAGTCGA TATTGTGAGAGGAATTGCTGTATGATACCGTTTGGAGAAATGATTGACATAATCTTTTAAGGCCGGTGACCCTATCATTTTCCAAATAAT TGTTGCTAGTACTTAGTTAATTAGACCCATTTTTTTCTTAGGAAAGAGTTGGATCAATCATGGGAGACCCTGAAAAATTTCCTTACCTTT CCTAAGGTTTAATTTCCTCTTCTGCGAAATGGAGACAATTATATTACTTTTGCTTATTTCATAAAGATCTTGTGAGGATTCAATGAAATG AGGTTAAATTCTTTTATTAAACAGAAAGTTTTGAGTATTTGCCTAGAGAGTGATGTGACTTTTGCAGCAGAAGGTGGGAAAACATCCAAG GGAACTACATTTCCTCCAGAAATTGTTTCTTCATTACCATCGACCTACTGATTATGGTTTTCTCATTTTACACTTGGTGTTCTTACTTGG GATCTTTGTCCTTAAGCTCAACAGGGAGCCACAACCCAGGGGACCTATGTGTACACTTGGAGTTTTTATCAGACTATCATTTGAACTTAC CACTACAGTTTAGCAAATGGCATGATGAGTTTGATTGATAATAGGAGTAGACGCAAGATACATTAAGTAGAGTACAAAGCATTTCATAAC CAAAATGTCATGGTTGGAGGTCTTCATTATTCGGTCTTTATCTCATTCAGGAATTTCCACTTGAAAAATCTCTGATAAGCTTTATTTCAG AAACTGCTTGAACAGCTCCACTGACAAATGCCTCACTATCTTCTGATACATCGTAGGCAGTTCTGAGGGTGAGAAAGTTCAAAGCAGATA GATGTTTTAACACAACAGGAGGACTTTTAAACAATCACCAGGACTCACTCCTCGGTGGTCAATTGGGCCTGTTTGGAGGCCTGACCTTTG GTCATCTTAAGGTCATCTAAGGCAGAAAAGAGAAGCTCACTTATAAGTTGGCACTTCTGAATCATTTGCCTTGAGGTCCATTTTTTATTC AGCCTTTGTTTAAACCTTCTTAGGAAGCCAGTTTGTAGAGTTCTGGGGATAAGAAGGCAGAAAAACCATGTCAATTCAGTGCTTTTATTT CACAGAAAATGAAGCAAAGGCCTAGAAACTAGAAAGACATTTCTCAAAAAGAAGATGGTGAACTTTTGGAAATACTGAGATTAGACTACA TTTTCCAATTTCTATCCCTAGCCCACTGCTCTTTCCAATATAATATCTGTATTCCATGGGAAAGACATGCCATCTGAATTGATGTATCGT AGTTGTTGAGATAATTTTGAAATGAGAAAACAATAGGGCACAGTCGTTTGGGAAGAATTTCCAGAAATTGCCATCATTTTCTTAAAGGCT AAGGACACTTATAGAGCTCTCCGATTTCCTATCTGATAAAAAAAGCCCAAACAAAGCTGCGGAAGCTGGCAGAGCCAGCAGATATTTTGT AAGGCAGCTTCACCTCTGCTGGCATTTTGTGGGGCAGGAGAGGGGGAGGGCAAAGGTATTAAATTTAGGCTTAAAAGCTCCTCAGAAATT CTTTACACACAAGAGACCAAGTTGGAGAAAAGAAGATGACTTGTGCCAAGGGGAAGAAAGAGAGAGACTAATGCCTGTGGTTTTCAAAGG TTAACAACAACATAAAAAAGCCAAGGTATTTGCACAGGGATGAATGCTCATTGGCTCTTGGCCAACAATTATACAAGGGCTTGTGCCCAC ATCCTGTAGCTGTGGTTTAGGGACGCTGCTCATGAGTGACTTCTTATGCTTAGTGGCAGGAAACTTTAGTCACTGATGTGTAAACTCACC TTTGGTCTGCACCTCCCACAACGTGCTCCGAAAGCAGTTAGGGGACTAGGCCTCTTGATTTCCTTGTAGATACCAGTTCCCCAGAAGCTA AGGAAAAACTCTGAGGCCTTGGAGTTACTGAGAGTGGACCAATACTTGTCTTATTCTACCTGATTTTGGCAACTGCTTAGGGTTCTTCTG TATCCACAAAAAGGAATTATGATATCCTCTGCTAAACCCTCTCTTTAGCCTCAAAGCCCAAGACCAAAAAAAATGAGCCATATTTCATTG |
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FusionGenePPI for XXYLT1_TPRG1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| XXYLT1 | ELAVL1, CUL4A, SHMT2, MOV10, NXF1, FAM63B, SCN3B, IZUMO1, HAUS7 | TPRG1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000310380 | - | 3 | 4 | 263_266 | 261 | 394 | target proteins |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000355729 | - | 2 | 3 | 263_266 | 58 | 191 | target proteins |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000356740 | - | 1 | 2 | 263_266 | 0 | 188 | target proteins |
| Hgene | XXYLT1 | chr3:194877178 | chr3:189028175 | ENST00000437101 | - | 4 | 5 | 263_266 | 58 | 191 | target proteins |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for XXYLT1_TPRG1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for XXYLT1_TPRG1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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