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Fusion gene ID: 42172 |
FusionGeneSummary for XPNPEP3_USO1 |
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Fusion gene information | Fusion gene name: XPNPEP3_USO1 | Fusion gene ID: 42172 | Hgene | Tgene | Gene symbol | XPNPEP3 | USO1 | Gene ID | 63929 | 8615 |
Gene name | X-prolyl aminopeptidase 3 | USO1 vesicle transport factor | |
Synonyms | APP3|ICP55|NPHPL1 | P115|TAP|VDP | |
Cytomap | 22q13.2 | 4q21.1 | |
Type of gene | protein-coding | protein-coding | |
Description | xaa-Pro aminopeptidase 3Intermediate Cleaving Peptidase 55X-Pro aminopeptidase 3X-prolyl aminopeptidase 3, mitochondrialprobable Xaa-Pro aminopeptidase 3 | general vesicular transport factor p115USO1 vesicle docking protein homologtranscytosis associated proteinvesicle docking protein p115 | |
Modification date | 20180527 | 20180523 | |
UniProtAcc | Q9NQH7 | O60763 | |
Ensembl transtripts involved in fusion gene | ENST00000541156, ENST00000357137, ENST00000544094, ENST00000414396, ENST00000482652, | ENST00000538159, ENST00000514213, | |
Fusion gene scores | * DoF score | 5 X 4 X 3=60 | 4 X 4 X 3=48 |
# samples | 5 | 5 | |
** MAII score | log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/48*10)=0.0588936890535686 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: XPNPEP3 [Title/Abstract] AND USO1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | XPNPEP3 | GO:0006508 | proteolysis | 28476889 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | AI635379 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000541156 | ENST00000538159 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
intron-3CDS | ENST00000541156 | ENST00000514213 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
intron-3CDS | ENST00000357137 | ENST00000538159 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
intron-3CDS | ENST00000357137 | ENST00000514213 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
5UTR-3CDS | ENST00000544094 | ENST00000538159 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
5UTR-3CDS | ENST00000544094 | ENST00000514213 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
intron-3CDS | ENST00000414396 | ENST00000538159 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
intron-3CDS | ENST00000414396 | ENST00000514213 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
3UTR-3CDS | ENST00000482652 | ENST00000538159 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
3UTR-3CDS | ENST00000482652 | ENST00000514213 | XPNPEP3 | chr22 | 41258321 | - | USO1 | chr4 | 76692047 | - |
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FusionProtFeatures for XPNPEP3_USO1 |
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Hgene | Tgene |
XPNPEP3 | USO1 |
Catalyzes the removal of a penultimate prolyl residuefrom the N-termini of peptides, such as Leu-Pro-Ala(PubMed:25609706, PubMed:28476889). Also shows low activitytowards peptides with Ala or Ser at the P1 position(PubMed:28476889). {ECO:0000269|PubMed:25609706,ECO:0000269|PubMed:28476889}. Isoform 1: Promotes TNFRSF1B-mediated phosphorylation ofMAPK8/JNK1 and MAPK9/JNK2, suggesting a function as an adapterprotein for TNFRSF1B; the effect is independent of XPNPEP3peptidase activity. May inhibit apoptotic cell death induced viaTNF-TNFRSF1B signaling. {ECO:0000269|PubMed:25609706}. | General vesicular transport factor required forintercisternal transport in the Golgi stack; it is required fortranscytotic fusion and/or subsequent binding of the vesicles tothe target membrane. May well act as a vesicular anchor byinteracting with the target membrane and holding the vesicular andtarget membranes in proximity. {ECO:0000250|UniProtKB:P41542}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for XPNPEP3_USO1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for XPNPEP3_USO1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for XPNPEP3_USO1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for XPNPEP3_USO1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | XPNPEP3 | C3150419 | NEPHRONOPHTHISIS-LIKE NEPHROPATHY 1 | 1 | CTD_human;UNIPROT |
Tgene | USO1 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Tgene | USO1 | C0037274 | Dermatologic disorders | 1 | CTD_human |
Tgene | USO1 | C0311375 | Arsenic Poisoning | 1 | CTD_human |