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Fusion gene ID: 4194 |
FusionGeneSummary for BIRC6_MYCNOS |
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Fusion gene information | Fusion gene name: BIRC6_MYCNOS | Fusion gene ID: 4194 | Hgene | Tgene | Gene symbol | BIRC6 | MYCNOS | Gene ID | 57448 | 10408 |
Gene name | baculoviral IAP repeat containing 6 | MYCN opposite strand | |
Synonyms | APOLLON|BRUCE | MYCN-AS1|N-CYM|NCYM|NYCM | |
Cytomap | 2p22.3 | 2p24.3 | |
Type of gene | protein-coding | protein-coding | |
Description | baculoviral IAP repeat-containing protein 6BIR repeat-containing ubiquitin-conjugating enzymeRING-type E3 ubiquitin transferase BIRC6ubiquitin-conjugating BIR-domain enzyme apollon | N-cym proteinDNA-binding transcriptional activator NCYMMYCN antisense RNA 1MYCN opposite strand/antisense RNA (non-protein coding)N-myc opposite strandv-myc myelocytomatosis viral related oncogene, neuroblastoma derived opposite strand | |
Modification date | 20180523 | 20180329 | |
UniProtAcc | Q9NR09 | ||
Ensembl transtripts involved in fusion gene | ENST00000421745, | ENST00000453400, ENST00000420452, ENST00000419083, ENST00000439180, ENST00000448719, | |
Fusion gene scores | * DoF score | 16 X 15 X 12=2880 | 1 X 1 X 1=1 |
# samples | 19 | 1 | |
** MAII score | log2(19/2880*10)=-3.92199748799873 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: BIRC6 [Title/Abstract] AND MYCNOS [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | MYCNOS | GO:0033673 | negative regulation of kinase activity | 24391509 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BLCA | TCGA-GU-AATO-01A | BIRC6 | chr2 | 32774548 | + | MYCNOS | chr2 | 16081219 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000421745 | ENST00000453400 | BIRC6 | chr2 | 32774548 | + | MYCNOS | chr2 | 16081219 | - |
5CDS-5UTR | ENST00000421745 | ENST00000420452 | BIRC6 | chr2 | 32774548 | + | MYCNOS | chr2 | 16081219 | - |
5CDS-5UTR | ENST00000421745 | ENST00000419083 | BIRC6 | chr2 | 32774548 | + | MYCNOS | chr2 | 16081219 | - |
5CDS-5UTR | ENST00000421745 | ENST00000439180 | BIRC6 | chr2 | 32774548 | + | MYCNOS | chr2 | 16081219 | - |
5CDS-5UTR | ENST00000421745 | ENST00000448719 | BIRC6 | chr2 | 32774548 | + | MYCNOS | chr2 | 16081219 | - |
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FusionProtFeatures for BIRC6_MYCNOS |
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Hgene | Tgene |
BIRC6 | MYCNOS |
Anti-apoptotic protein which can regulate cell death bycontrolling caspases and by acting as an E3 ubiquitin-proteinligase. Has an unusual ubiquitin conjugation system in that itcould combine in a single polypeptide, ubiquitin conjugating (E2)with ubiquitin ligase (E3) activity, forming a chimeric E2/E3ubiquitin ligase. Its tragets include CASP9 and DIABLO/SMAC. Actsas an inhibitor of CASP3, CASP7 and CASP9. Important regulator forthe final stages of cytokinesis. Crucial for normal vesicletargeting to the site of abscission, but also for the integrity ofthe midbody and the midbody ring, and its striking ubiquitinmodification. {ECO:0000269|PubMed:14765125,ECO:0000269|PubMed:15200957, ECO:0000269|PubMed:18329369}. | Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for BIRC6_MYCNOS |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for BIRC6_MYCNOS |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
BIRC6 | RNF41, KIF23, USP8, DIABLO, CASP9, HTRA2, UBC, VAV2, SIRT7, CASP3, CASP7, BIRC6, CASP8, UBE2D1, CSNK2A1, RASSF2, EPS15L1, GBF1, CCNA2, CDC27, ANAPC11, TEX35, PRSS45, RTBDN, C3orf20, WDR4, DFNA5, FAM175B, CA11, FIGF, MOS, HERC2, CHIA, CLEC11A, INTS4P2, TBC1D22A, FAM58A, MCPH1, TP53, UNK, RPGR, KIF22, LLGL2, PLK1, MYH13, SSH3, AGRP, ANGPTL3, UGGT2, AKAP9, DCAF12, FERMT2, PSMC5, MGST3, CCDC22, OSBPL2, ADAMTS4, HEY1 | MYCNOS |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for BIRC6_MYCNOS |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for BIRC6_MYCNOS |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |