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Fusion gene ID: 41858 |
FusionGeneSummary for WDR48_HERC2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: WDR48_HERC2 | Fusion gene ID: 41858 | Hgene | Tgene | Gene symbol | WDR48 | HERC2 | Gene ID | 57599 | 8924 |
Gene name | WD repeat domain 48 | HECT and RLD domain containing E3 ubiquitin protein ligase 2 | |
Synonyms | P80|SPG60|UAF1 | D15F37S1|MRT38|SHEP1|jdf2|p528 | |
Cytomap | 3p22.2 | 15q13.1 | |
Type of gene | protein-coding | protein-coding | |
Description | WD repeat-containing protein 48USP1 associated factor 1WD repeat endosomal proteintesticular tissue protein Li 224 | E3 ubiquitin-protein ligase HERC2HECT-type E3 ubiquitin transferase HERC2hect domain and RCC1-like domain-containing protein 2hect domain and RLD 2probable E3 ubiquitin-protein ligase HERC2 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q8TAF3 | O95714 | |
Ensembl transtripts involved in fusion gene | ENST00000302313, ENST00000418020, ENST00000544962, ENST00000396258, ENST00000466405, | ENST00000261609, ENST00000563945, | |
Fusion gene scores | * DoF score | 3 X 3 X 2=18 | 3 X 3 X 3=27 |
# samples | 3 | 3 | |
** MAII score | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: WDR48 [Title/Abstract] AND HERC2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | WDR48 | GO:0016579 | protein deubiquitination | 18082604|19075014|24145035 |
Tgene | HERC2 | GO:0006974 | cellular response to DNA damage stimulus | 22508508 |
Tgene | HERC2 | GO:0016567 | protein ubiquitination | 20304803 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BLCA | TCGA-XF-AAMG-01A | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000302313 | ENST00000261609 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
5CDS-intron | ENST00000302313 | ENST00000563945 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
5UTR-3CDS | ENST00000418020 | ENST00000261609 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
5UTR-intron | ENST00000418020 | ENST00000563945 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
In-frame | ENST00000544962 | ENST00000261609 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
5CDS-intron | ENST00000544962 | ENST00000563945 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
5UTR-3CDS | ENST00000396258 | ENST00000261609 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
5UTR-intron | ENST00000396258 | ENST00000563945 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
intron-3CDS | ENST00000466405 | ENST00000261609 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
intron-intron | ENST00000466405 | ENST00000563945 | WDR48 | chr3 | 39093564 | + | HERC2 | chr15 | 28397976 | - |
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FusionProtFeatures for WDR48_HERC2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
WDR48 | HERC2 |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 4457_4794 | 3582 | 4835 | Domain | HECT |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 3951_4002 | 3582 | 4835 | Repeat | RCC1 3-1 |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 4004_4056 | 3582 | 4835 | Repeat | RCC1 3-2 |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 4058_4108 | 3582 | 4835 | Repeat | RCC1 3-3 |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 4110_4162 | 3582 | 4835 | Repeat | RCC1 3-4 |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 4164_4214 | 3582 | 4835 | Repeat | RCC1 3-5 |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 4216_4266 | 3582 | 4835 | Repeat | RCC1 3-6 |
Tgene | >HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 4268_4318 | 3582 | 4835 | Repeat | RCC1 3-7 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 115_154 | 16 | 678 | Repeat | Note=WD 3 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 166_205 | 16 | 678 | Repeat | Note=WD 4 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 208_247 | 16 | 678 | Repeat | Note=WD 5 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 250_289 | 16 | 678 | Repeat | Note=WD 6 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 28_67 | 16 | 678 | Repeat | Note=WD 1 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 292_334 | 16 | 678 | Repeat | Note=WD 7 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 358_397 | 16 | 678 | Repeat | Note=WD 8 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000302313 | + | 1 | 19 | 73_112 | 16 | 678 | Repeat | Note=WD 2 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 115_154 | -40 | 596 | Repeat | Note=WD 3 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 166_205 | -40 | 596 | Repeat | Note=WD 4 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 208_247 | -40 | 596 | Repeat | Note=WD 5 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 250_289 | -40 | 596 | Repeat | Note=WD 6 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 28_67 | -40 | 596 | Repeat | Note=WD 1 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 292_334 | -40 | 596 | Repeat | Note=WD 7 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 358_397 | -40 | 596 | Repeat | Note=WD 8 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000396258 | + | 1 | 18 | 73_112 | -40 | 596 | Repeat | Note=WD 2 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 115_154 | 16 | 403 | Repeat | Note=WD 3 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 166_205 | 16 | 403 | Repeat | Note=WD 4 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 208_247 | 16 | 403 | Repeat | Note=WD 5 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 250_289 | 16 | 403 | Repeat | Note=WD 6 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 28_67 | 16 | 403 | Repeat | Note=WD 1 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 292_334 | 16 | 403 | Repeat | Note=WD 7 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 358_397 | 16 | 403 | Repeat | Note=WD 8 |
Hgene | >WDR48 | chr3:39093564 | chr15:28397976 | ENST00000544962 | + | 1 | 11 | 73_112 | 16 | 403 | Repeat | Note=WD 2 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 948_980 | 3582 | 4835 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 1207_1283 | 3582 | 4835 | Domain | Cytochrome b5 heme-binding |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 1859_1932 | 3582 | 4835 | Domain | MIB/HERC2 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 2759_2936 | 3582 | 4835 | Domain | DOC |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 2958_3009 | 3582 | 4835 | Repeat | RCC1 2-1 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 3010_3064 | 3582 | 4835 | Repeat | RCC1 2-2 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 3065_3116 | 3582 | 4835 | Repeat | RCC1 2-3 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 3118_3168 | 3582 | 4835 | Repeat | RCC1 2-4 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 3171_3222 | 3582 | 4835 | Repeat | RCC1 2-5 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 3224_3274 | 3582 | 4835 | Repeat | RCC1 2-6 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 3275_3326 | 3582 | 4835 | Repeat | RCC1 2-7 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 415_461 | 3582 | 4835 | Repeat | RCC1 1-1 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 462_512 | 3582 | 4835 | Repeat | RCC1 1-2 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 513_568 | 3582 | 4835 | Repeat | RCC1 1-3 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 569_620 | 3582 | 4835 | Repeat | RCC1 1-4 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 623_674 | 3582 | 4835 | Repeat | RCC1 1-5 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 675_726 | 3582 | 4835 | Repeat | RCC1 1-6 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 728_778 | 3582 | 4835 | Repeat | RCC1 1-7 |
Tgene | HERC2 | chr3:39093564 | chr15:28397976 | ENST00000261609 | - | 68 | 93 | 2702_2749 | 3582 | 4835 | Zinc finger | ZZ-type |
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FusionGeneSequence for WDR48_HERC2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_WDR48_ENST00000302313_chr3_39093564_+_HERC2_ENST00000261609_chr15_28397976_-_1269aa MAAHHRQNTAGRRKVQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDTSTSGTVKIPGAEGLRVEFDRQCSTERRHDPLT VMDGVNRIVSVRSGREWSDWSSELRIPGDELKWKFISDGSVNGWGWRFTVYPIMPAAGPKELLSDRCVLSCPSMDLVTCLLDFRLNLASN RSIVPRLAASLAACAQLSALAASHRMWALQRLRKLLTTEFGQSININRLLGENDGETRALSFTGSALAALVKGLPEALQRQFEYEDPIVR GGKQLLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYCMASRVAVALDKRTPLPRLFLDEVAKKIRELMADSENMDVLHESHDIFK REQDEQLVQWMNRRPDDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGR LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV TAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHLQEIPIIALRNRLLLLHHLSELFCPCIPMFDLEGSLDET GLGPSVGFDTLRGILISQGKEAAFRKVVQATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRVW KVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAARAPVHSSMFRFLGVLLGIAIRTGSPLSLNLAE PVWKQLAGMSLTIADLSEVDKDFIPGLMYIRDNEATSEEFEAMSLPFTVPSASGQDIQLSSKHTHITLDNRAEYVRLAINYRLHEFDEQV AAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEPSASLIQWFWEVMESFSNTERSLFLRFVWGRTRLPRTIADF RGRDFVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDTDDYARIALTGEPAADDSSDDSDNEDVDSFASDS >In-frame_WDR48_ENST00000544962_chr3_39093564_+_HERC2_ENST00000261609_chr15_28397976_-_1269aa MAAHHRQNTAGRRKVQVADMLLELCVTELEDVATDSQSGRLSSQPVVVESSHPYTDDTSTSGTVKIPGAEGLRVEFDRQCSTERRHDPLT VMDGVNRIVSVRSGREWSDWSSELRIPGDELKWKFISDGSVNGWGWRFTVYPIMPAAGPKELLSDRCVLSCPSMDLVTCLLDFRLNLASN RSIVPRLAASLAACAQLSALAASHRMWALQRLRKLLTTEFGQSININRLLGENDGETRALSFTGSALAALVKGLPEALQRQFEYEDPIVR GGKQLLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYCMASRVAVALDKRTPLPRLFLDEVAKKIRELMADSENMDVLHESHDIFK REQDEQLVQWMNRRPDDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGR LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACV TAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTT NAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHLQEIPIIALRNRLLLLHHLSELFCPCIPMFDLEGSLDET GLGPSVGFDTLRGILISQGKEAAFRKVVQATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFGPDSLLLPHRVW KVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRDCYLLSPAARAPVHSSMFRFLGVLLGIAIRTGSPLSLNLAE PVWKQLAGMSLTIADLSEVDKDFIPGLMYIRDNEATSEEFEAMSLPFTVPSASGQDIQLSSKHTHITLDNRAEYVRLAINYRLHEFDEQV AAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEPSASLIQWFWEVMESFSNTERSLFLRFVWGRTRLPRTIADF RGRDFVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDTDDYARIALTGEPAADDSSDDSDNEDVDSFASDS |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_WDR48_ENST00000302313_chr3_39093564_+_HERC2_ENST00000261609_chr15_28397976_-_3807nt ATGGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTGGCAGATATGCTGTTGGAGCTCTGTGTCACCGAGTTGGAG GATGTGGCCACAGACTCGCAGAGCGGCCGCCTCTCTTCTCAGCCTGTGGTGGTGGAGAGTAGCCACCCTTACACCGACGACACCTCCACC AGTGGCACAGTGAAGATACCAGGTGCAGAAGGACTCAGGGTAGAATTTGACCGGCAGTGCTCCACAGAGAGGCGCCACGACCCTCTCACA GTCATGGACGGCGTCAACAGGATCGTCTCCGTGCGGTCAGGCCGAGAGTGGTCCGACTGGTCCAGCGAGCTGCGCATCCCAGGGGATGAG TTAAAGTGGAAGTTCATCAGCGATGGGTCTGTGAATGGCTGGGGCTGGCGCTTCACCGTCTATCCCATCATGCCAGCTGCTGGCCCTAAA GAACTCCTCTCTGACCGCTGCGTCCTCTCCTGTCCATCCATGGACTTGGTGACGTGTCTGTTAGACTTCCGACTCAACCTTGCCTCTAAC AGAAGCATCGTCCCTCGCCTTGCGGCCTCGCTGGCAGCTTGTGCACAGCTGAGTGCCCTAGCTGCCAGTCACAGAATGTGGGCCCTTCAG AGACTGAGGAAGCTGCTTACAACTGAATTTGGGCAGTCAATTAACATAAATAGGCTGCTTGGAGAAAATGATGGGGAAACAAGAGCTTTG AGTTTTACAGGTAGTGCTCTTGCTGCTTTGGTGAAAGGTCTTCCAGAAGCTTTGCAAAGGCAGTTTGAATATGAAGATCCTATTGTGAGG GGTGGCAAACAGCTGCTCCACAGCCCATTCTTTAAGGTACTGGTAGCTCTTGCTTGTGACCTGGAGCTGGACACTCTGCCTTGCTGTGCC GAGACGCACAAGTGGGCCTGGTTCCGGAGGTACTGCATGGCCTCCCGTGTTGCTGTGGCCCTTGACAAAAGAACACCGTTGCCCCGTCTG TTTCTTGATGAGGTGGCTAAGAAAATTCGTGAATTAATGGCAGACAGCGAAAACATGGATGTTCTGCATGAGAGCCATGACATTTTTAAA AGAGAGCAAGACGAACAACTTGTGCAGTGGATGAACAGGCGACCAGATGACTGGACTCTCTCTGCTGGTGGCAGTGGAACAATTTATGGA TGGGGACATAATCACAGGGGCCAGCTCGGGGGCATTGAAGGCGCAAAAGTCAAAGTTCCCACTCCCTGTGAAGCCCTTGCAACTCTCAGA CCCGTGCAGTTAATCGGAGGGGAACAGACCCTCTTTGCTGTGACGGCTGATGGGAAGCTGTATGCCACTGGGTATGGTGCAGGTGGCAGA CTAGGCATTGGAGGGACAGAGTCGGTGTCCACCCCAACATTGCTTGAATCCATTCAGCATGTGTTTATTAAGAAAGTAGCTGTGAACTCT GGAGGAAAGCACTGCCTTGCCCTGTCTTCAGAAGGAGAAGTTTACTCTTGGGGTGAGGCAGAAGATGGGAAGTTGGGGCATGGCAACAGA AGTCCGTGTGACCGCCCTCGTGTCATCGAGTCTCTGAGAGGAATTGAAGTGGTCGATGTTGCTGCTGGCGGAGCCCACAGCGCCTGTGTC ACAGCAGCCGGGGACCTCTACACATGGGGCAAAGGCCGCTACGGCCGGCTGGGGCACAGCGACAGTGAGGACCAGCTGAAGCCGAAGCTG GTGGAGGCGCTGCAGGGCCACCGTGTGGTTGACATCGCCTGTGGCAGTGGAGATGCCCAGACCCTCTGCCTCACAGATGACGACACTGTC TGGTCCTGGGGGGACGGGGACTACGGCAAGCTCGGCCGGGGAGGCAGCGATGGCTGTAAAGTGCCTATGAAGATTGATTCTCTTACTGGT CTTGGAGTAGTTAAAGTGGAATGCGGATCCCAGTTTTCTGTTGCCCTTACCAAATCTGGAGCTGTTTATACCTGGGGCAAAGGCGATTAT CACAGGTTGGGCCATGGATCAGATGACCATGTTCGAAGGCCTCGGCAGGTCCAAGGGTTGCAGGGGAAGAAAGTCATCGCCATCGCCACT GGCTCCCTGCACTGTGTGTGCTGCACAGAGGATGGTGAGGTTTATACATGGGGCGACAATGATGAGGGACAACTGGGAGACGGAACCACC AATGCCATCCAGAGGCCTCGGTTGGTAGCTGCCCTTCAGGGTAAGAAGGTCAACCGTGTGGCCTGTGGCTCAGCACATACCCTCGCCTGG TCGACCAGCAAGCCCGCCAGTGCTGGCAAACTCCCTGCACAGGTCCCCATGGAGTACAATCACCTGCAGGAGATCCCCATCATTGCGCTG AGGAACCGTCTGCTGCTGCTGCACCACCTCTCCGAGCTCTTCTGCCCCTGCATCCCCATGTTCGACCTGGAAGGCTCGCTCGACGAAACT GGACTCGGGCCTTCTGTTGGGTTCGACACTCTCCGAGGAATTCTGATATCCCAGGGAAAGGAGGCGGCTTTCCGGAAAGTAGTACAAGCA ACTATGGTACGCGATCGTCAGCATGGCCCCGTCGTGGAGCTGAACCGCATCCAGGTCAAACGATCAAGGAGCAAAGGCGGGCTGGCCGGC CCCGACGGCACCAAGTCTGTCTTTGGGCAGATGTGTGCTAAGATGAGCTCGTTTGGTCCCGACAGCCTCCTCCTTCCTCACCGTGTCTGG AAAGTCAAGTTTGTGGGTGAATCTGTGGATGACTGTGGGGGCGGCTACAGCGAGTCCATAGCTGAGATCTGTGAGGAGCTGCAGAACGGA CTCACGCCCCTGCTGATCGTGACACCCAACGGGAGGGATGAGTCTGGGGCCAACCGAGACTGCTACCTGCTCAGCCCGGCCGCCAGAGCA CCCGTGCACAGCAGCATGTTCCGCTTCCTGGGTGTGTTGCTGGGCATTGCCATCCGAACCGGGAGTCCCCTGAGCCTCAACCTTGCCGAG CCTGTCTGGAAGCAGCTGGCTGGGATGAGCCTCACCATCGCGGACCTCAGTGAGGTTGATAAGGATTTTATTCCTGGACTCATGTACATC CGAGACAATGAAGCCACCTCAGAGGAGTTTGAAGCCATGAGCCTGCCCTTCACAGTGCCAAGTGCCAGTGGCCAGGACATTCAGTTGAGC TCCAAGCACACACACATCACCCTGGACAACCGCGCGGAGTACGTGCGGCTGGCGATAAACTATAGACTCCATGAATTTGATGAGCAGGTG GCTGCTGTTCGGGAAGGAATGGCCCGCGTTGTGCCTGTTCCCCTCCTCTCTCTGTTCACCGGCTACGAACTGGAGACGATGGTGTGTGGC AGCCCTGACATCCCGCTGCACCTTCTCAAGTCGGTGGCCACCTATAAAGGCATCGAGCCTTCCGCATCGCTGATCCAGTGGTTCTGGGAG GTGATGGAGTCCTTCTCCAACACAGAGCGCTCTCTTTTCCTTCGCTTCGTCTGGGGCCGGACGAGGCTGCCCAGGACCATCGCCGACTTC CGGGGCCGAGACTTCGTCATCCAGGTGTTGGATAAATACAACCCTCCAGACCACTTCCTCCCTGAGTCCTACACCTGTTTCTTCTTGCTG AAGCTGCCCAGGTATTCCTGCAAGCAGGTGCTGGAGGAGAAGCTCAAGTACGCCATCCACTTCTGCAAGTCCATAGACACAGATGACTAC GCTCGCATCGCACTTACAGGAGAGCCAGCCGCCGACGACAGCAGCGACGATTCAGATAACGAGGATGTCGACTCCTTTGCTTCGGACTCT >In-frame_WDR48_ENST00000544962_chr3_39093564_+_HERC2_ENST00000261609_chr15_28397976_-_3807nt ATGGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTGGCAGATATGCTGTTGGAGCTCTGTGTCACCGAGTTGGAG GATGTGGCCACAGACTCGCAGAGCGGCCGCCTCTCTTCTCAGCCTGTGGTGGTGGAGAGTAGCCACCCTTACACCGACGACACCTCCACC AGTGGCACAGTGAAGATACCAGGTGCAGAAGGACTCAGGGTAGAATTTGACCGGCAGTGCTCCACAGAGAGGCGCCACGACCCTCTCACA GTCATGGACGGCGTCAACAGGATCGTCTCCGTGCGGTCAGGCCGAGAGTGGTCCGACTGGTCCAGCGAGCTGCGCATCCCAGGGGATGAG TTAAAGTGGAAGTTCATCAGCGATGGGTCTGTGAATGGCTGGGGCTGGCGCTTCACCGTCTATCCCATCATGCCAGCTGCTGGCCCTAAA GAACTCCTCTCTGACCGCTGCGTCCTCTCCTGTCCATCCATGGACTTGGTGACGTGTCTGTTAGACTTCCGACTCAACCTTGCCTCTAAC AGAAGCATCGTCCCTCGCCTTGCGGCCTCGCTGGCAGCTTGTGCACAGCTGAGTGCCCTAGCTGCCAGTCACAGAATGTGGGCCCTTCAG AGACTGAGGAAGCTGCTTACAACTGAATTTGGGCAGTCAATTAACATAAATAGGCTGCTTGGAGAAAATGATGGGGAAACAAGAGCTTTG AGTTTTACAGGTAGTGCTCTTGCTGCTTTGGTGAAAGGTCTTCCAGAAGCTTTGCAAAGGCAGTTTGAATATGAAGATCCTATTGTGAGG GGTGGCAAACAGCTGCTCCACAGCCCATTCTTTAAGGTACTGGTAGCTCTTGCTTGTGACCTGGAGCTGGACACTCTGCCTTGCTGTGCC GAGACGCACAAGTGGGCCTGGTTCCGGAGGTACTGCATGGCCTCCCGTGTTGCTGTGGCCCTTGACAAAAGAACACCGTTGCCCCGTCTG TTTCTTGATGAGGTGGCTAAGAAAATTCGTGAATTAATGGCAGACAGCGAAAACATGGATGTTCTGCATGAGAGCCATGACATTTTTAAA AGAGAGCAAGACGAACAACTTGTGCAGTGGATGAACAGGCGACCAGATGACTGGACTCTCTCTGCTGGTGGCAGTGGAACAATTTATGGA TGGGGACATAATCACAGGGGCCAGCTCGGGGGCATTGAAGGCGCAAAAGTCAAAGTTCCCACTCCCTGTGAAGCCCTTGCAACTCTCAGA CCCGTGCAGTTAATCGGAGGGGAACAGACCCTCTTTGCTGTGACGGCTGATGGGAAGCTGTATGCCACTGGGTATGGTGCAGGTGGCAGA CTAGGCATTGGAGGGACAGAGTCGGTGTCCACCCCAACATTGCTTGAATCCATTCAGCATGTGTTTATTAAGAAAGTAGCTGTGAACTCT GGAGGAAAGCACTGCCTTGCCCTGTCTTCAGAAGGAGAAGTTTACTCTTGGGGTGAGGCAGAAGATGGGAAGTTGGGGCATGGCAACAGA AGTCCGTGTGACCGCCCTCGTGTCATCGAGTCTCTGAGAGGAATTGAAGTGGTCGATGTTGCTGCTGGCGGAGCCCACAGCGCCTGTGTC ACAGCAGCCGGGGACCTCTACACATGGGGCAAAGGCCGCTACGGCCGGCTGGGGCACAGCGACAGTGAGGACCAGCTGAAGCCGAAGCTG GTGGAGGCGCTGCAGGGCCACCGTGTGGTTGACATCGCCTGTGGCAGTGGAGATGCCCAGACCCTCTGCCTCACAGATGACGACACTGTC TGGTCCTGGGGGGACGGGGACTACGGCAAGCTCGGCCGGGGAGGCAGCGATGGCTGTAAAGTGCCTATGAAGATTGATTCTCTTACTGGT CTTGGAGTAGTTAAAGTGGAATGCGGATCCCAGTTTTCTGTTGCCCTTACCAAATCTGGAGCTGTTTATACCTGGGGCAAAGGCGATTAT CACAGGTTGGGCCATGGATCAGATGACCATGTTCGAAGGCCTCGGCAGGTCCAAGGGTTGCAGGGGAAGAAAGTCATCGCCATCGCCACT GGCTCCCTGCACTGTGTGTGCTGCACAGAGGATGGTGAGGTTTATACATGGGGCGACAATGATGAGGGACAACTGGGAGACGGAACCACC AATGCCATCCAGAGGCCTCGGTTGGTAGCTGCCCTTCAGGGTAAGAAGGTCAACCGTGTGGCCTGTGGCTCAGCACATACCCTCGCCTGG TCGACCAGCAAGCCCGCCAGTGCTGGCAAACTCCCTGCACAGGTCCCCATGGAGTACAATCACCTGCAGGAGATCCCCATCATTGCGCTG AGGAACCGTCTGCTGCTGCTGCACCACCTCTCCGAGCTCTTCTGCCCCTGCATCCCCATGTTCGACCTGGAAGGCTCGCTCGACGAAACT GGACTCGGGCCTTCTGTTGGGTTCGACACTCTCCGAGGAATTCTGATATCCCAGGGAAAGGAGGCGGCTTTCCGGAAAGTAGTACAAGCA ACTATGGTACGCGATCGTCAGCATGGCCCCGTCGTGGAGCTGAACCGCATCCAGGTCAAACGATCAAGGAGCAAAGGCGGGCTGGCCGGC CCCGACGGCACCAAGTCTGTCTTTGGGCAGATGTGTGCTAAGATGAGCTCGTTTGGTCCCGACAGCCTCCTCCTTCCTCACCGTGTCTGG AAAGTCAAGTTTGTGGGTGAATCTGTGGATGACTGTGGGGGCGGCTACAGCGAGTCCATAGCTGAGATCTGTGAGGAGCTGCAGAACGGA CTCACGCCCCTGCTGATCGTGACACCCAACGGGAGGGATGAGTCTGGGGCCAACCGAGACTGCTACCTGCTCAGCCCGGCCGCCAGAGCA CCCGTGCACAGCAGCATGTTCCGCTTCCTGGGTGTGTTGCTGGGCATTGCCATCCGAACCGGGAGTCCCCTGAGCCTCAACCTTGCCGAG CCTGTCTGGAAGCAGCTGGCTGGGATGAGCCTCACCATCGCGGACCTCAGTGAGGTTGATAAGGATTTTATTCCTGGACTCATGTACATC CGAGACAATGAAGCCACCTCAGAGGAGTTTGAAGCCATGAGCCTGCCCTTCACAGTGCCAAGTGCCAGTGGCCAGGACATTCAGTTGAGC TCCAAGCACACACACATCACCCTGGACAACCGCGCGGAGTACGTGCGGCTGGCGATAAACTATAGACTCCATGAATTTGATGAGCAGGTG GCTGCTGTTCGGGAAGGAATGGCCCGCGTTGTGCCTGTTCCCCTCCTCTCTCTGTTCACCGGCTACGAACTGGAGACGATGGTGTGTGGC AGCCCTGACATCCCGCTGCACCTTCTCAAGTCGGTGGCCACCTATAAAGGCATCGAGCCTTCCGCATCGCTGATCCAGTGGTTCTGGGAG GTGATGGAGTCCTTCTCCAACACAGAGCGCTCTCTTTTCCTTCGCTTCGTCTGGGGCCGGACGAGGCTGCCCAGGACCATCGCCGACTTC CGGGGCCGAGACTTCGTCATCCAGGTGTTGGATAAATACAACCCTCCAGACCACTTCCTCCCTGAGTCCTACACCTGTTTCTTCTTGCTG AAGCTGCCCAGGTATTCCTGCAAGCAGGTGCTGGAGGAGAAGCTCAAGTACGCCATCCACTTCTGCAAGTCCATAGACACAGATGACTAC GCTCGCATCGCACTTACAGGAGAGCCAGCCGCCGACGACAGCAGCGACGATTCAGATAACGAGGATGTCGACTCCTTTGCTTCGGACTCT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_WDR48_ENST00000302313_chr3_39093564_+_HERC2_ENST00000261609_chr15_28397976_-_4558nt AAGTGACGTCGGAGTGTCAACATGCAAGATGGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTGGCAGATATGCT GTTGGAGCTCTGTGTCACCGAGTTGGAGGATGTGGCCACAGACTCGCAGAGCGGCCGCCTCTCTTCTCAGCCTGTGGTGGTGGAGAGTAG CCACCCTTACACCGACGACACCTCCACCAGTGGCACAGTGAAGATACCAGGTGCAGAAGGACTCAGGGTAGAATTTGACCGGCAGTGCTC CACAGAGAGGCGCCACGACCCTCTCACAGTCATGGACGGCGTCAACAGGATCGTCTCCGTGCGGTCAGGCCGAGAGTGGTCCGACTGGTC CAGCGAGCTGCGCATCCCAGGGGATGAGTTAAAGTGGAAGTTCATCAGCGATGGGTCTGTGAATGGCTGGGGCTGGCGCTTCACCGTCTA TCCCATCATGCCAGCTGCTGGCCCTAAAGAACTCCTCTCTGACCGCTGCGTCCTCTCCTGTCCATCCATGGACTTGGTGACGTGTCTGTT AGACTTCCGACTCAACCTTGCCTCTAACAGAAGCATCGTCCCTCGCCTTGCGGCCTCGCTGGCAGCTTGTGCACAGCTGAGTGCCCTAGC TGCCAGTCACAGAATGTGGGCCCTTCAGAGACTGAGGAAGCTGCTTACAACTGAATTTGGGCAGTCAATTAACATAAATAGGCTGCTTGG AGAAAATGATGGGGAAACAAGAGCTTTGAGTTTTACAGGTAGTGCTCTTGCTGCTTTGGTGAAAGGTCTTCCAGAAGCTTTGCAAAGGCA GTTTGAATATGAAGATCCTATTGTGAGGGGTGGCAAACAGCTGCTCCACAGCCCATTCTTTAAGGTACTGGTAGCTCTTGCTTGTGACCT GGAGCTGGACACTCTGCCTTGCTGTGCCGAGACGCACAAGTGGGCCTGGTTCCGGAGGTACTGCATGGCCTCCCGTGTTGCTGTGGCCCT TGACAAAAGAACACCGTTGCCCCGTCTGTTTCTTGATGAGGTGGCTAAGAAAATTCGTGAATTAATGGCAGACAGCGAAAACATGGATGT TCTGCATGAGAGCCATGACATTTTTAAAAGAGAGCAAGACGAACAACTTGTGCAGTGGATGAACAGGCGACCAGATGACTGGACTCTCTC TGCTGGTGGCAGTGGAACAATTTATGGATGGGGACATAATCACAGGGGCCAGCTCGGGGGCATTGAAGGCGCAAAAGTCAAAGTTCCCAC TCCCTGTGAAGCCCTTGCAACTCTCAGACCCGTGCAGTTAATCGGAGGGGAACAGACCCTCTTTGCTGTGACGGCTGATGGGAAGCTGTA TGCCACTGGGTATGGTGCAGGTGGCAGACTAGGCATTGGAGGGACAGAGTCGGTGTCCACCCCAACATTGCTTGAATCCATTCAGCATGT GTTTATTAAGAAAGTAGCTGTGAACTCTGGAGGAAAGCACTGCCTTGCCCTGTCTTCAGAAGGAGAAGTTTACTCTTGGGGTGAGGCAGA AGATGGGAAGTTGGGGCATGGCAACAGAAGTCCGTGTGACCGCCCTCGTGTCATCGAGTCTCTGAGAGGAATTGAAGTGGTCGATGTTGC TGCTGGCGGAGCCCACAGCGCCTGTGTCACAGCAGCCGGGGACCTCTACACATGGGGCAAAGGCCGCTACGGCCGGCTGGGGCACAGCGA CAGTGAGGACCAGCTGAAGCCGAAGCTGGTGGAGGCGCTGCAGGGCCACCGTGTGGTTGACATCGCCTGTGGCAGTGGAGATGCCCAGAC CCTCTGCCTCACAGATGACGACACTGTCTGGTCCTGGGGGGACGGGGACTACGGCAAGCTCGGCCGGGGAGGCAGCGATGGCTGTAAAGT GCCTATGAAGATTGATTCTCTTACTGGTCTTGGAGTAGTTAAAGTGGAATGCGGATCCCAGTTTTCTGTTGCCCTTACCAAATCTGGAGC TGTTTATACCTGGGGCAAAGGCGATTATCACAGGTTGGGCCATGGATCAGATGACCATGTTCGAAGGCCTCGGCAGGTCCAAGGGTTGCA GGGGAAGAAAGTCATCGCCATCGCCACTGGCTCCCTGCACTGTGTGTGCTGCACAGAGGATGGTGAGGTTTATACATGGGGCGACAATGA TGAGGGACAACTGGGAGACGGAACCACCAATGCCATCCAGAGGCCTCGGTTGGTAGCTGCCCTTCAGGGTAAGAAGGTCAACCGTGTGGC CTGTGGCTCAGCACATACCCTCGCCTGGTCGACCAGCAAGCCCGCCAGTGCTGGCAAACTCCCTGCACAGGTCCCCATGGAGTACAATCA CCTGCAGGAGATCCCCATCATTGCGCTGAGGAACCGTCTGCTGCTGCTGCACCACCTCTCCGAGCTCTTCTGCCCCTGCATCCCCATGTT CGACCTGGAAGGCTCGCTCGACGAAACTGGACTCGGGCCTTCTGTTGGGTTCGACACTCTCCGAGGAATTCTGATATCCCAGGGAAAGGA GGCGGCTTTCCGGAAAGTAGTACAAGCAACTATGGTACGCGATCGTCAGCATGGCCCCGTCGTGGAGCTGAACCGCATCCAGGTCAAACG ATCAAGGAGCAAAGGCGGGCTGGCCGGCCCCGACGGCACCAAGTCTGTCTTTGGGCAGATGTGTGCTAAGATGAGCTCGTTTGGTCCCGA CAGCCTCCTCCTTCCTCACCGTGTCTGGAAAGTCAAGTTTGTGGGTGAATCTGTGGATGACTGTGGGGGCGGCTACAGCGAGTCCATAGC TGAGATCTGTGAGGAGCTGCAGAACGGACTCACGCCCCTGCTGATCGTGACACCCAACGGGAGGGATGAGTCTGGGGCCAACCGAGACTG CTACCTGCTCAGCCCGGCCGCCAGAGCACCCGTGCACAGCAGCATGTTCCGCTTCCTGGGTGTGTTGCTGGGCATTGCCATCCGAACCGG GAGTCCCCTGAGCCTCAACCTTGCCGAGCCTGTCTGGAAGCAGCTGGCTGGGATGAGCCTCACCATCGCGGACCTCAGTGAGGTTGATAA GGATTTTATTCCTGGACTCATGTACATCCGAGACAATGAAGCCACCTCAGAGGAGTTTGAAGCCATGAGCCTGCCCTTCACAGTGCCAAG TGCCAGTGGCCAGGACATTCAGTTGAGCTCCAAGCACACACACATCACCCTGGACAACCGCGCGGAGTACGTGCGGCTGGCGATAAACTA TAGACTCCATGAATTTGATGAGCAGGTGGCTGCTGTTCGGGAAGGAATGGCCCGCGTTGTGCCTGTTCCCCTCCTCTCTCTGTTCACCGG CTACGAACTGGAGACGATGGTGTGTGGCAGCCCTGACATCCCGCTGCACCTTCTCAAGTCGGTGGCCACCTATAAAGGCATCGAGCCTTC CGCATCGCTGATCCAGTGGTTCTGGGAGGTGATGGAGTCCTTCTCCAACACAGAGCGCTCTCTTTTCCTTCGCTTCGTCTGGGGCCGGAC GAGGCTGCCCAGGACCATCGCCGACTTCCGGGGCCGAGACTTCGTCATCCAGGTGTTGGATAAATACAACCCTCCAGACCACTTCCTCCC TGAGTCCTACACCTGTTTCTTCTTGCTGAAGCTGCCCAGGTATTCCTGCAAGCAGGTGCTGGAGGAGAAGCTCAAGTACGCCATCCACTT CTGCAAGTCCATAGACACAGATGACTACGCTCGCATCGCACTTACAGGAGAGCCAGCCGCCGACGACAGCAGCGACGATTCAGATAACGA GGATGTCGACTCCTTTGCTTCGGACTCTACACAAGATTATTTAACAGGACACTAAGATGGGGAAACGTCCTCGTGAGATGAGAGCCTGAG CCAGGCAGCAGAGCGCTCGCTGCTGTGTAGACTGTAGGCTGCCTGGTGTGTCTGATGAGAAGCGTCCGTCCTCGAGCCAGGCGGGAGGAG GGAGTGGAGAGACTGACTGGCCGTGATGGGAATGACAGTGAGAAGGTCCGCCTGTGCGCGTGGAACACTGTGGACGCTCGACTTCCAAGG GTCTTCTCACCCGTAATGCTGCATTACATGTAGGACTGTGTTTACTAAAGTGTGTAAATGTTTATATAAATACCAAATTGCAGCATCCCC AAAATGAATAAAGCCTTTTTACTTGTGGGTGCAATCGATTTTTTTTCTTTCTCCTTTCTTTCAAGTGTCGTGAGTCGTCTTGATTGTATA TTGGAAATAACTGTGTAACAAATCGTATTATAAATATTTCAATTAATTTTACTCTGAATTTGTTTATTAAAAGACTTTTGAACATGAAAT GATTAGTATTACTTGAATGCATCCAGAGGATATTTAAACCAAAATGAAAAACCAGAAGGCCATTTGGTGTCCCCCCTCCCAGGTGTCCCC TTGTAGCATATGCATTATGTCATCTGAATTGAGGCCTTTCTGTGAACAGCATCATAACTTCTATCATGGAAAGTGTACTATATATAATGT >In-frame_WDR48_ENST00000544962_chr3_39093564_+_HERC2_ENST00000261609_chr15_28397976_-_4540nt AACATGCAAGATGGCGGCCCATCACCGGCAGAACACAGCAGGGCGGAGGAAAGTGCAGGTGGCAGATATGCTGTTGGAGCTCTGTGTCAC CGAGTTGGAGGATGTGGCCACAGACTCGCAGAGCGGCCGCCTCTCTTCTCAGCCTGTGGTGGTGGAGAGTAGCCACCCTTACACCGACGA CACCTCCACCAGTGGCACAGTGAAGATACCAGGTGCAGAAGGACTCAGGGTAGAATTTGACCGGCAGTGCTCCACAGAGAGGCGCCACGA CCCTCTCACAGTCATGGACGGCGTCAACAGGATCGTCTCCGTGCGGTCAGGCCGAGAGTGGTCCGACTGGTCCAGCGAGCTGCGCATCCC AGGGGATGAGTTAAAGTGGAAGTTCATCAGCGATGGGTCTGTGAATGGCTGGGGCTGGCGCTTCACCGTCTATCCCATCATGCCAGCTGC TGGCCCTAAAGAACTCCTCTCTGACCGCTGCGTCCTCTCCTGTCCATCCATGGACTTGGTGACGTGTCTGTTAGACTTCCGACTCAACCT TGCCTCTAACAGAAGCATCGTCCCTCGCCTTGCGGCCTCGCTGGCAGCTTGTGCACAGCTGAGTGCCCTAGCTGCCAGTCACAGAATGTG GGCCCTTCAGAGACTGAGGAAGCTGCTTACAACTGAATTTGGGCAGTCAATTAACATAAATAGGCTGCTTGGAGAAAATGATGGGGAAAC AAGAGCTTTGAGTTTTACAGGTAGTGCTCTTGCTGCTTTGGTGAAAGGTCTTCCAGAAGCTTTGCAAAGGCAGTTTGAATATGAAGATCC TATTGTGAGGGGTGGCAAACAGCTGCTCCACAGCCCATTCTTTAAGGTACTGGTAGCTCTTGCTTGTGACCTGGAGCTGGACACTCTGCC TTGCTGTGCCGAGACGCACAAGTGGGCCTGGTTCCGGAGGTACTGCATGGCCTCCCGTGTTGCTGTGGCCCTTGACAAAAGAACACCGTT GCCCCGTCTGTTTCTTGATGAGGTGGCTAAGAAAATTCGTGAATTAATGGCAGACAGCGAAAACATGGATGTTCTGCATGAGAGCCATGA CATTTTTAAAAGAGAGCAAGACGAACAACTTGTGCAGTGGATGAACAGGCGACCAGATGACTGGACTCTCTCTGCTGGTGGCAGTGGAAC AATTTATGGATGGGGACATAATCACAGGGGCCAGCTCGGGGGCATTGAAGGCGCAAAAGTCAAAGTTCCCACTCCCTGTGAAGCCCTTGC AACTCTCAGACCCGTGCAGTTAATCGGAGGGGAACAGACCCTCTTTGCTGTGACGGCTGATGGGAAGCTGTATGCCACTGGGTATGGTGC AGGTGGCAGACTAGGCATTGGAGGGACAGAGTCGGTGTCCACCCCAACATTGCTTGAATCCATTCAGCATGTGTTTATTAAGAAAGTAGC TGTGAACTCTGGAGGAAAGCACTGCCTTGCCCTGTCTTCAGAAGGAGAAGTTTACTCTTGGGGTGAGGCAGAAGATGGGAAGTTGGGGCA TGGCAACAGAAGTCCGTGTGACCGCCCTCGTGTCATCGAGTCTCTGAGAGGAATTGAAGTGGTCGATGTTGCTGCTGGCGGAGCCCACAG CGCCTGTGTCACAGCAGCCGGGGACCTCTACACATGGGGCAAAGGCCGCTACGGCCGGCTGGGGCACAGCGACAGTGAGGACCAGCTGAA GCCGAAGCTGGTGGAGGCGCTGCAGGGCCACCGTGTGGTTGACATCGCCTGTGGCAGTGGAGATGCCCAGACCCTCTGCCTCACAGATGA CGACACTGTCTGGTCCTGGGGGGACGGGGACTACGGCAAGCTCGGCCGGGGAGGCAGCGATGGCTGTAAAGTGCCTATGAAGATTGATTC TCTTACTGGTCTTGGAGTAGTTAAAGTGGAATGCGGATCCCAGTTTTCTGTTGCCCTTACCAAATCTGGAGCTGTTTATACCTGGGGCAA AGGCGATTATCACAGGTTGGGCCATGGATCAGATGACCATGTTCGAAGGCCTCGGCAGGTCCAAGGGTTGCAGGGGAAGAAAGTCATCGC CATCGCCACTGGCTCCCTGCACTGTGTGTGCTGCACAGAGGATGGTGAGGTTTATACATGGGGCGACAATGATGAGGGACAACTGGGAGA CGGAACCACCAATGCCATCCAGAGGCCTCGGTTGGTAGCTGCCCTTCAGGGTAAGAAGGTCAACCGTGTGGCCTGTGGCTCAGCACATAC CCTCGCCTGGTCGACCAGCAAGCCCGCCAGTGCTGGCAAACTCCCTGCACAGGTCCCCATGGAGTACAATCACCTGCAGGAGATCCCCAT CATTGCGCTGAGGAACCGTCTGCTGCTGCTGCACCACCTCTCCGAGCTCTTCTGCCCCTGCATCCCCATGTTCGACCTGGAAGGCTCGCT CGACGAAACTGGACTCGGGCCTTCTGTTGGGTTCGACACTCTCCGAGGAATTCTGATATCCCAGGGAAAGGAGGCGGCTTTCCGGAAAGT AGTACAAGCAACTATGGTACGCGATCGTCAGCATGGCCCCGTCGTGGAGCTGAACCGCATCCAGGTCAAACGATCAAGGAGCAAAGGCGG GCTGGCCGGCCCCGACGGCACCAAGTCTGTCTTTGGGCAGATGTGTGCTAAGATGAGCTCGTTTGGTCCCGACAGCCTCCTCCTTCCTCA CCGTGTCTGGAAAGTCAAGTTTGTGGGTGAATCTGTGGATGACTGTGGGGGCGGCTACAGCGAGTCCATAGCTGAGATCTGTGAGGAGCT GCAGAACGGACTCACGCCCCTGCTGATCGTGACACCCAACGGGAGGGATGAGTCTGGGGCCAACCGAGACTGCTACCTGCTCAGCCCGGC CGCCAGAGCACCCGTGCACAGCAGCATGTTCCGCTTCCTGGGTGTGTTGCTGGGCATTGCCATCCGAACCGGGAGTCCCCTGAGCCTCAA CCTTGCCGAGCCTGTCTGGAAGCAGCTGGCTGGGATGAGCCTCACCATCGCGGACCTCAGTGAGGTTGATAAGGATTTTATTCCTGGACT CATGTACATCCGAGACAATGAAGCCACCTCAGAGGAGTTTGAAGCCATGAGCCTGCCCTTCACAGTGCCAAGTGCCAGTGGCCAGGACAT TCAGTTGAGCTCCAAGCACACACACATCACCCTGGACAACCGCGCGGAGTACGTGCGGCTGGCGATAAACTATAGACTCCATGAATTTGA TGAGCAGGTGGCTGCTGTTCGGGAAGGAATGGCCCGCGTTGTGCCTGTTCCCCTCCTCTCTCTGTTCACCGGCTACGAACTGGAGACGAT GGTGTGTGGCAGCCCTGACATCCCGCTGCACCTTCTCAAGTCGGTGGCCACCTATAAAGGCATCGAGCCTTCCGCATCGCTGATCCAGTG GTTCTGGGAGGTGATGGAGTCCTTCTCCAACACAGAGCGCTCTCTTTTCCTTCGCTTCGTCTGGGGCCGGACGAGGCTGCCCAGGACCAT CGCCGACTTCCGGGGCCGAGACTTCGTCATCCAGGTGTTGGATAAATACAACCCTCCAGACCACTTCCTCCCTGAGTCCTACACCTGTTT CTTCTTGCTGAAGCTGCCCAGGTATTCCTGCAAGCAGGTGCTGGAGGAGAAGCTCAAGTACGCCATCCACTTCTGCAAGTCCATAGACAC AGATGACTACGCTCGCATCGCACTTACAGGAGAGCCAGCCGCCGACGACAGCAGCGACGATTCAGATAACGAGGATGTCGACTCCTTTGC TTCGGACTCTACACAAGATTATTTAACAGGACACTAAGATGGGGAAACGTCCTCGTGAGATGAGAGCCTGAGCCAGGCAGCAGAGCGCTC GCTGCTGTGTAGACTGTAGGCTGCCTGGTGTGTCTGATGAGAAGCGTCCGTCCTCGAGCCAGGCGGGAGGAGGGAGTGGAGAGACTGACT GGCCGTGATGGGAATGACAGTGAGAAGGTCCGCCTGTGCGCGTGGAACACTGTGGACGCTCGACTTCCAAGGGTCTTCTCACCCGTAATG CTGCATTACATGTAGGACTGTGTTTACTAAAGTGTGTAAATGTTTATATAAATACCAAATTGCAGCATCCCCAAAATGAATAAAGCCTTT TTACTTGTGGGTGCAATCGATTTTTTTTCTTTCTCCTTTCTTTCAAGTGTCGTGAGTCGTCTTGATTGTATATTGGAAATAACTGTGTAA CAAATCGTATTATAAATATTTCAATTAATTTTACTCTGAATTTGTTTATTAAAAGACTTTTGAACATGAAATGATTAGTATTACTTGAAT GCATCCAGAGGATATTTAAACCAAAATGAAAAACCAGAAGGCCATTTGGTGTCCCCCCTCCCAGGTGTCCCCTTGTAGCATATGCATTAT GTCATCTGAATTGAGGCCTTTCTGTGAACAGCATCATAACTTCTATCATGGAAAGTGTACTATATATAATGTTTGTGTCATGTATATGCC |
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FusionGenePPI for WDR48_HERC2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
WDR48 | BCR, BRCA1, CSNK2A1, CSNK2A2, CSNK2B, CTNND1, DKC1, DMWD, POLR2G, POLR2I, PPIB, SET, STK11, SUPT6H, TARBP1, TCOF1, TP53, USP1, WRN, NELFE, CUL4B, EIF3A, EIF3F, EIF3H, ARHGEF10, KDM4A, ZBTB33, PSME3, CRTAP, UNC13B, RAD51AP1, AHCYL1, C11orf58, GPN1, PHLPP2, MYCBP2, PHLPP1, BOP1, AHCYL2, AP3M1, GPN3, ZNF639, UBR5, WDR70, SHQ1, NOP10, PPP1R9A, NHP2, IWS1, YLPM1, USP12, USP46, UIMC1, WDR20, ZBTB2, TRMT11, P3H1, PPP1R9B, NAF1, FAM122B, ATAD5, PCNA, FANCI, PSMA3, ITCH, PAXIP1, FBXL7, CUL3, VSX2, BASP1, YARS, NTRK1, UBC, AR, NFATC1, NFATC2, JMJD6, TSPYL6, RNF19B, USH1C, RAD51 | HERC2 | DBNL, MPDU1, ZRANB1, USP19, USP20, USP16, USP42, PMS1, CDC42, BRCA1, RNF8, MDC1, UBE2N, RNF168, SIRT3, CALM1, PIAS4, UBC, UBE3A, SIRT7, ATRIP, CLSPN, CCP110, NEURL4, SSSCA1, ECI2, RPA3, RPA1, CEP170, SRGAP2, TBK1, TANK, SEC23IP, KTN1, HERC2, STK33, UBE2D3, XPA, CDK8, MAPK6, TP53, FBXL5, CEP250, PSMD14, CCDC8, EIF3I, UCHL5, DNAJA1, BIRC6, GET4, FAM63A, RIPK1, RNF115, DNAJB5, HOXD13, CCDC88A, HERC3, HOOK1, RABEP1, FAM83H, RYBP, CCDC151, SPZ1, RNF166, ETFA, INPP4A, MUS81, CCDC22, AGAP3, ARHGEF5, EME1, HERC1, KIF20A, HPS3, HPS5, TUBA1C, KMT2D, RAB34, ZDHHC17, EPHA7, ZBTB5, NUP153, GTF3C2, MLF2, ARNT, RNGTT, CCDC186, TRMT2A, IGHV1OR15-9, FDFT1, ASAH1, MAVS, CST4, SPTLC2, ZG16B, NCCRP1, HLA-A, HM13, VDAC2, KRT80, CSTA, BLMH, PSMB4, PSMD1, PSMD11, PELP1, TEX10, ITPR2, PTPN1, GNA13, FNDC3A, EPCAM, NCOA4, LACTB, NEK11, HLA-E, LMNB2, FTH1, MLEC, LMNA, URI1, PPM1B, COPB2, OBSL1, COPG2, COPG1, COPA, BICD1, BICD2, ZFYVE9, SNAPIN, SLC30A9, PCM1, FHOD3, AKAP9, NIN, NUDCD2, SLC27A4, ASPM, PEX1, ETAA1, PRR14L, RIC8A, PHKG2, SCO2, WDR62, GNAS, PHKB, PHKA2, ENPP1, EIF3H, MIOS, EIF3A, OCRL, MTMR3, EIF3E, PHKA1, WDR59, EIF3B, EIF3L, EIF3M, EIF4G1, EIF3G, EIF3C, EIF3K, EIF3D, CTNNA1, CTNNB1, WDR24, GCC2, LCP1, SELO, SPECC1L, SNX6, ARAF, TUBB3, RAF1, ABR, RER1, TXLNG, CBX2, SENP1, ATP4A, EXD2, SSX2IP, CDC25C, MYO9B, CXorf57, SOGA1, FLII, FASTKD5, CPT1A, AURKB, WDR92, COPZ1, FTL, COPE, PRKAR2B, CEP290, CEP162, CEP104, MARK2, KIFC3, PSMC1, SMC3, GTSE1, CHMP4B, NPRL2, LRRK2, RAB5A, RAB5B, ATOH1, SIRT1, STK11, UBE2D1, EGFR, DUSP26, MAP7D2, CCDC136, PRIMPOL, ZNF286A, APBB1, FAM98A, LGALS3BP, ARID3A, SOST, HSDL2, FARP2, CCDC65, KNOP1, APBA2, ERG, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for WDR48_HERC2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for WDR48_HERC2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | HERC2 | C0009324 | Ulcerative Colitis | 1 | CTD_human |
Tgene | HERC2 | C0036341 | Schizophrenia | 1 | PSYGENET |
Tgene | HERC2 | C0264423 | Asthma, Occupational | 1 | CTD_human |
Tgene | HERC2 | C3809753 | MENTAL RETARDATION, AUTOSOMAL RECESSIVE 38 | 1 | ORPHANET;UNIPROT |