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Fusion gene ID: 41611 |
FusionGeneSummary for VPS41_SDK1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: VPS41_SDK1 | Fusion gene ID: 41611 | Hgene | Tgene | Gene symbol | VPS41 | SDK1 | Gene ID | 27072 | 221935 |
| Gene name | VPS41, HOPS complex subunit | sidekick cell adhesion molecule 1 | |
| Synonyms | HVPS41|HVSP41|hVps41p | - | |
| Cytomap | 7p14.1 | 7p22.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | vacuolar protein sorting-associated protein 41 homologS53vacuolar assembly protein 41vacuolar protein sorting 41 homolog | protein sidekick-1sidekick homolog 1, cell adhesion molecule | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | P49754 | Q7Z5N4 | |
| Ensembl transtripts involved in fusion gene | ENST00000310301, ENST00000395969, ENST00000466017, | ENST00000404826, ENST00000389531, ENST00000466611, | |
| Fusion gene scores | * DoF score | 9 X 7 X 8=504 | 7 X 7 X 8=392 |
| # samples | 9 | 8 | |
| ** MAII score | log2(9/504*10)=-2.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/392*10)=-2.29278174922785 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: VPS41 [Title/Abstract] AND SDK1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | LGG | TCGA-DU-6399-01A | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000310301 | ENST00000404826 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| In-frame | ENST00000310301 | ENST00000389531 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| 5CDS-intron | ENST00000310301 | ENST00000466611 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| In-frame | ENST00000395969 | ENST00000404826 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| In-frame | ENST00000395969 | ENST00000389531 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| 5CDS-intron | ENST00000395969 | ENST00000466611 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| 5UTR-3CDS | ENST00000466017 | ENST00000404826 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| 5UTR-3CDS | ENST00000466017 | ENST00000389531 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
| 5UTR-intron | ENST00000466017 | ENST00000466611 | VPS41 | chr7 | 38835065 | - | SDK1 | chr7 | 4150295 | + |
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FusionProtFeatures for VPS41_SDK1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| VPS41 | SDK1 |
| Plays a role in vesicle-mediated protein trafficking tolysosomal compartments including the endocytic membrane transportand autophagic pathways. Believed to act in part as a corecomponent of the putative HOPS endosomal tethering complex isproposed to be involved in the Rab5-to-Rab7 endosome conversionprobably implicating MON1A/B, and via binding SNAREs and SNAREcomplexes to mediate tethering and docking events during SNARE-mediated membrane fusion. The HOPS complex is proposed to berecruited to Rab7 on the late endosomal membrane and to regulatelate endocytic, phagocytic and autophagic traffic towardslysosomes (PubMed:23351085). Involved in homotypic vesicle fusionsbetween late endosomes and in heterotypic fusions between lateendosomes and lysosomes implicated in degradation of endocytosedcargo (PubMed:9159129, PubMed:23167963, PubMed:25445562,PubMed:25908847). Required for fusion of autophagosomes withlysosomes (PubMed:25783203). May link the HOPS complex toendosomal Rab7 via its association with RILP and to lysosomalmembranes via its association with ARL8B, suggesting that theseinteractions may bring the compartments to close proximity forfusion (PubMed:25445562, PubMed:25908847). Involved in the directtrans-Golgi network to late endosomes transport of lysosomalmembrane proteins independently of HOPS (PubMed:23322049).Involved in sorting to the regulated secretory pathway presumablyimplicating the AP-3 adaptor complex (By similarity). May play arole in HOPS-independent function in the regulated secretorypathway (PubMed:24210660). {ECO:0000250|UniProtKB:D3ZVH6,ECO:0000269|PubMed:23167963, ECO:0000269|PubMed:23322049,ECO:0000269|PubMed:25445562, ECO:0000269|PubMed:25783203,ECO:0000269|PubMed:25908847, ECO:0000269|PubMed:9159129,ECO:0000305|PubMed:23167963, ECO:0000305|PubMed:23351085,ECO:0000305|PubMed:24210660, ECO:0000305|PubMed:25445562}. | Adhesion molecule that promotes lamina-specific synapticconnections in the retina. Expressed in specific subsets ofinterneurons and retinal ganglion cells (RGCs) and promotessynaptic connectivity via homophilic interactions.{ECO:0000250|UniProtKB:Q8AV58}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | VPS41 | chr7:38835065 | chr7:4150295 | ENST00000310301 | - | 9 | 29 | 18_27 | 239 | 855 | Compositional bias | Note=Poly-Glu |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1176_1274 | 1108 | 2214 | Domain | Fibronectin type-III 6 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1279_1376 | 1108 | 2214 | Domain | Fibronectin type-III 7 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1380_1474 | 1108 | 2214 | Domain | Fibronectin type-III 8 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1479_1576 | 1108 | 2214 | Domain | Fibronectin type-III 9 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1581_1699 | 1108 | 2214 | Domain | Fibronectin type-III 10 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1704_1800 | 1108 | 2214 | Domain | Fibronectin type-III 11 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1804_1899 | 1108 | 2214 | Domain | Fibronectin type-III 12 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1902_2000 | 1108 | 2214 | Domain | Fibronectin type-III 13 |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 2207_2213 | 1108 | 2214 | Motif | PDZ-binding |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 2031_2213 | 1108 | 2214 | Topological domain | Cytoplasmic |
| Tgene | >SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 2010_2030 | 1108 | 2214 | Transmembrane | Helical |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >VPS41 | chr7:38835065 | chr7:4150295 | ENST00000310301 | - | 9 | 29 | 568_712 | 239 | 855 | Repeat | Note=CHCR |
| Hgene | >VPS41 | chr7:38835065 | chr7:4150295 | ENST00000310301 | - | 9 | 29 | 791_839 | 239 | 855 | Zinc finger | RING-type%3B atypical |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 19_58 | 1108 | 2214 | Compositional bias | Note=Pro-rich |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 104_186 | 1108 | 2214 | Domain | Note=Ig-like C2-type 1 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 1072_1171 | 1108 | 2214 | Domain | Fibronectin type-III 5 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 191_277 | 1108 | 2214 | Domain | Note=Ig-like C2-type 2 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 293_378 | 1108 | 2214 | Domain | Note=Ig-like C2-type 3 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 386_476 | 1108 | 2214 | Domain | Note=Ig-like C2-type 4 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 480_569 | 1108 | 2214 | Domain | Note=Ig-like C2-type 5 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 574_663 | 1108 | 2214 | Domain | Note=Ig-like C2-type 6 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 670_766 | 1108 | 2214 | Domain | Fibronectin type-III 1 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 771_867 | 1108 | 2214 | Domain | Fibronectin type-III 2 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 872_970 | 1108 | 2214 | Domain | Fibronectin type-III 3 |
| Tgene | SDK1 | chr7:38835065 | chr7:4150295 | ENST00000404826 | + | 21 | 45 | 974_1068 | 1108 | 2214 | Domain | Fibronectin type-III 4 |
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FusionGeneSequence for VPS41_SDK1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_VPS41_ENST00000310301_chr7_38835065_-_SDK1_ENST00000404826_chr7_4150295_+_1345aa MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQI SLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVGAIGDEEEWVTLYEEENEPDAQMLEIPNLT PYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVV SDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAK DLDPEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL GYQIAYRLASSSPHTFTTVEVGATVRQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQW VPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATP HTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTA YNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLT SHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEITSTTLNVSWGEPAAANGILQGYRVVYEPLAPVQGVSKVVTVEVRGN WQRWLKVRDLTKGVTYFFRVQARTITYGPELQANITAGPAEGSPGSPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDM FVKDIPRSATSYTLSLDKLRQGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPFYEEWWFLLVMALSSLIVILLVVFALVLHGQNKKYK NCSTGKGISTMEESVTLDNGGFAALELSSRHLNVKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYNGAVLTESVSLKEKSADASESEAT >In-frame_VPS41_ENST00000310301_chr7_38835065_-_SDK1_ENST00000389531_chr7_4150295_+_1325aa MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQI SLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVGAIGDEEEWVTLYEEENEPDAQMLEIPNLT PYTHYRFRMKQVNIVGPSPYSPSSRVIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVV SDRLEREFTIEELEEWMEYELQMQAFNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAK DLDPEPRSHIVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIIL GYQIAYRLASSSPHTFTTVEVGATVRQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQW VPGSDGASPIRYFTMQVRELPRGEWQTYSSSISHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATP HTTSSVLIQWQPPRDESLNGLLQGYRIYYRELEYEAGSGTEAKTLKNPIALHAELTDLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEA APAMAPQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPK SDPQQGRTHQAAPGAPSFLAFSEITSTTLNVSWGEPAAANGILQGYRVVYEPLAPVQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRV QARTITYGPELQANITAGPAEGSPGSPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDMFVKDIPRSATSYTLSLDKLR QGVTYEFRVVAVNEAGYGEPSNPSTAVSAQVEAPFYEEWWFLLVMALSSLIVILLVVFALVLHGQNKKYKNCSTGKGISTMEESVTLDNG GFAALELSSRHLNVKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYNGAVLTESVSLKEKSADASESEATDSDYEDALPKHSFVNHYMSD >In-frame_VPS41_ENST00000395969_chr7_38835065_-_SDK1_ENST00000404826_chr7_4150295_+_1320aa MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVVQVFGLYS GEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITN VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVGAIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSR VIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQA FNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAKDLDPEPRSHIVRGNHTQSALLAGLR KFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPHTFTTVEVGATV RQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEW QTYSSSISHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGY RIYYRELEYEAGSGTEAKTLKNPIALHAELTAQSSFKTVNSSSTSTMCELTHLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMA PQNVQVTPLTASQLEVTWDPPPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQ GRTHQAAPGAPSFLAFSEITSTTLNVSWGEPAAANGILQGYRVVYEPLAPVQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRVQARTI TYGPELQANITAGPAEGSPGSPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDMFVKDIPRSATSYTLSLDKLRQGVTY EFRVVAVNEAGYGEPSNPSTAVSAQVEAPFYEEWWFLLVMALSSLIVILLVVFALVLHGQNKKYKNCSTGKGISTMEESVTLDNGGFAAL ELSSRHLNVKSTFSKKNGTRSPPRPSPGGLHYSDEDICNKYNGAVLTESVSLKEKSADASESEATDSDYEDALPKHSFVNHYMSDPTYYN >In-frame_VPS41_ENST00000395969_chr7_38835065_-_SDK1_ENST00000389531_chr7_4150295_+_1300aa MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVVQVFGLYS GEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITN VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVGAIGDEEEWVTLYEEENEPDAQMLEIPNLTPYTHYRFRMKQVNIVGPSPYSPSSR VIQTLQAPPDVAPTSVTVRTASETSLRLRWVPLPDSQYNGNPESVGYRIKYWRSDLQSSAVAQVVSDRLEREFTIEELEEWMEYELQMQA FNAVGAGPWSEVVRGRTRESVPSAAPENVSAEAVSSTQILLTWTSVPEQDQNGLILGYKILFRAKDLDPEPRSHIVRGNHTQSALLAGLR KFVLYELQVLAFTRIGNGVPSTPLILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPHTFTTVEVGATV RQFTATDLAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQAEVTARSLRLQWVPGSDGASPIRYFTMQVRELPRGEW QTYSSSISHEATACVVDRLRPFTSYKLRLKATNDIGDSDFSSETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDESLNGLLQGY RIYYRELEYEAGSGTEAKTLKNPIALHAELTDLKKYRRYEVIMTAYNIIGESPASAPVEVFVGEAAPAMAPQNVQVTPLTASQLEVTWDP PPPESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPVVRLKNLTSHTKYLVSISAFNAAGDGPKSDPQQGRTHQAAPGAPSFLAFSEIT STTLNVSWGEPAAANGILQGYRVVYEPLAPVQGVSKVVTVEVRGNWQRWLKVRDLTKGVTYFFRVQARTITYGPELQANITAGPAEGSPG SPRDVLVTKSASELTLQWTEGHSGDTPTTGYVIEARPSDEGLWDMFVKDIPRSATSYTLSLDKLRQGVTYEFRVVAVNEAGYGEPSNPST AVSAQVEAPFYEEWWFLLVMALSSLIVILLVVFALVLHGQNKKYKNCSTGKGISTMEESVTLDNGGFAALELSSRHLNVKSTFSKKNGTR SPPRPSPGGLHYSDEDICNKYNGAVLTESVSLKEKSADASESEATDSDYEDALPKHSFVNHYMSDPTYYNSWKRRAQGRAPAPHRYEAVA |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_VPS41_ENST00000310301_chr7_38835065_-_SDK1_ENST00000404826_chr7_4150295_+_4035nt ATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTG AAGTATGAAAGGCTTTCCAATGGGGTAACTGAAATACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTG GGCACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGGAACATCACTCAGAAGTTTGATGTAAGTCCTGTGAAGATAAATCAGATT AGCTTGGATGAAAGTGGAGAGCACATGGGTGTGTGTTCAGAGGATGGCAAGGTGCAGGTATTTGGACTGTATTCTGGAGAAGAATTTCAC GAGACTTTTGACTGTCCCATTAAAATTATTGCTGTGCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTGACCGGAGGGAAGAAG CTGCTACTGTTTGAACGGTCTTGGATGAACAGATGGAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGGAGTGTGAAGTGGAGA GGCCATCTGATTGCTTGGGCCAATAATATGGGTGTGAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAATGTGCCCCGGGATGAT ATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCTCTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGGACTTCTGTCAAGGTG GGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCTCTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCCAAACCTCACA CCCTACACTCACTACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGGGTCATCCAGACCCTG CAGGCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGGGTGCCCCTGCCGGAT TCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTACAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGCCCAAGTCGTC AGTGACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGTCGGG GCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGACGCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGC TCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATCCTGTTCCGGGCCAAA GACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTAC GAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAACGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAAGACGATGCCCCAGGC CCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCCAACGGCATCATCCTG GGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCC ACCGACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTGGAGGCCACCGTCATC ACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGTGG GTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGGCAGACCTACTCCTCG TCCATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAAGCCACCAACGACATT GGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCTGTCTCAGCGACGCCA CACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATACAGGATCTACTACAGG GAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGCCCAAAGCAGC TTCAAGACGGTGAACAGCAGCTCCACATCGACGATGTGTGAACTAACACATTTAAAGAAGTACCGGCGCTATGAAGTAATAATGACCGCC TATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACGTGCAG GTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGCCAGAATGGGAACATCCAAGGCTACAAGATT TACTACTGGGAGGCAGACAGCCAGAACGAAACGGAGAAAATGAAGGTCCTCTTCCTCCCCGAGCCCGTGGTGAGGCTGAAGAACCTGACC AGCCATACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCAG GCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAAC GGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGGAAGTGAGAGGGAAC TGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCTATTTCTTCCGTGTCCAAGCGCGGACCATCACCTACGGGCCCGAG CTCCAAGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACTGACG CTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGCTATGTGATCGAGGCCCGGCCCTCAGATGAAGGCTTATGGGACATG TTTGTGAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTG GCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAAGTGGAAGCCCCATTCTACGAGGAGTGGTGG TTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAG AACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGC CACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCCGGCGGCCTGCACTACTCAGACGAG GACATCTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACG GACTCTGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCACTACATGAGCGACCCCACCTACTACAACTCATGGAAGCGCAGG GCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCACGCAG >In-frame_VPS41_ENST00000310301_chr7_38835065_-_SDK1_ENST00000389531_chr7_4150295_+_3975nt ATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTG AAGTATGAAAGGCTTTCCAATGGGGTAACTGAAATACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTG GGCACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGGAACATCACTCAGAAGTTTGATGTAAGTCCTGTGAAGATAAATCAGATT AGCTTGGATGAAAGTGGAGAGCACATGGGTGTGTGTTCAGAGGATGGCAAGGTGCAGGTATTTGGACTGTATTCTGGAGAAGAATTTCAC GAGACTTTTGACTGTCCCATTAAAATTATTGCTGTGCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTGACCGGAGGGAAGAAG CTGCTACTGTTTGAACGGTCTTGGATGAACAGATGGAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGGAGTGTGAAGTGGAGA GGCCATCTGATTGCTTGGGCCAATAATATGGGTGTGAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAATGTGCCCCGGGATGAT ATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCTCTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGGACTTCTGTCAAGGTG GGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCTCTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCCAAACCTCACA CCCTACACTCACTACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGGGTCATCCAGACCCTG CAGGCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGGGTGCCCCTGCCGGAT TCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTACAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGCCCAAGTCGTC AGTGACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGTCGGG GCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGACGCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGC TCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATCCTGTTCCGGGCCAAA GACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTAC GAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAACGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAAGACGATGCCCCAGGC CCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCCAACGGCATCATCCTG GGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCC ACCGACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTGGAGGCCACCGTCATC ACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGTGG GTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGGCAGACCTACTCCTCG TCCATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAAGCCACCAACGACATT GGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCTGTCTCAGCGACGCCA CACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATACAGGATCTACTACAGG GAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGATTTAAAGAAG TACCGGCGCTATGAAGTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCGAGGCT GCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGC CAGAATGGGAACATCCAAGGCTACAAGATTTACTACTGGGAGGCAGACAGCCAGAACGAAACGGAGAAAATGAAGGTCCTCTTCCTCCCC GAGCCCGTGGTGAGGCTGAAGAACCTGACCAGCCATACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGGACCTAAG AGTGACCCCCAGCAGGGGCGCACCCACCAGGCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAAC GTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCCCTGTACAAGGGGTGAGC AAGGTGGTGACCGTGGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCTATTTCTTCCGTGTC CAAGCGCGGACCATCACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGCTCGCCTAGAGATGTC CTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGCTATGTGATCGAGGCC CGGCCCTCAGATGAAGGCTTATGGGACATGTTTGTGAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGG CAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAA GTGGAAGCCCCATTCTACGAGGAGTGGTGGTTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTC GTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGACCCTGGACAACGGA GGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCCT AGCCCCGGCGGCCTGCACTACTCAGACGAGGACATCTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAG TCGGCAGATGCATCAGAATCTGAGGCCACGGACTCTGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCACTACATGAGCGAC CCCACCTACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCGGGCTCCGAGGCGGGC GCGCAGCTGCACCCGGTCATCACCACGCAGAGCGCGGGCGGCGTCTACACCCCCGCTGGCCCCGGCGCGCGAACTCCGCTCACCGGCTTC >In-frame_VPS41_ENST00000395969_chr7_38835065_-_SDK1_ENST00000404826_chr7_4150295_+_3960nt ATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTG AAGTATGAAAGGCTTTCCAATGGGGTAACTGAAATACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTG GGCACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGGAACATCACTCAGAAGTTTGATGTAGTGCAGGTATTTGGACTGTATTCT GGAGAAGAATTTCACGAGACTTTTGACTGTCCCATTAAAATTATTGCTGTGCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTG ACCGGAGGGAAGAAGCTGCTACTGTTTGAACGGTCTTGGATGAACAGATGGAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGG AGTGTGAAGTGGAGAGGCCATCTGATTGCTTGGGCCAATAATATGGGTGTGAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAAT GTGCCCCGGGATGATATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCTCTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGG ACTTCTGTCAAGGTGGGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCTCTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAG ATCCCAAACCTCACACCCTACACTCACTACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGG GTCATCCAGACCCTGCAGGCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGG GTGCCCCTGCCGGATTCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTACAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCA GTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCC TTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGACGCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCA GCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATC CTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGC AAGTTCGTGCTCTACGAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAACGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAA GACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCC AACGGCATCATCCTGGGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTG AGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTG GAGGCCACCGTCATCACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGC CTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGG CAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAA GCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCT GTCTCAGCGACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATAC AGGATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTC ACAGCCCAAAGCAGCTTCAAGACGGTGAACAGCAGCTCCACATCGACGATGTGTGAACTAACACATTTAAAGAAGTACCGGCGCTATGAA GTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCGAGGCTGCCCCGGCCATGGCC CCGCAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGCCAGAATGGGAACATC CAAGGCTACAAGATTTACTACTGGGAGGCAGACAGCCAGAACGAAACGGAGAAAATGAAGGTCCTCTTCCTCCCCGAGCCCGTGGTGAGG CTGAAGAACCTGACCAGCCATACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGGACCTAAGAGTGACCCCCAGCAG GGGCGCACCCACCAGGCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAG CCTGCGGCGGCCAACGGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTG GAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCTATTTCTTCCGTGTCCAAGCGCGGACCATC ACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGTCC GCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGCTATGTGATCGAGGCCCGGCCCTCAGATGAA GGCTTATGGGACATGTTTGTGAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTAC GAGTTCCGGGTGGTGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAAGTGGAAGCCCCATTC TACGAGGAGTGGTGGTTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAG AATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGCCCTG GAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCCGGCGGCCTG CACTACTCAGACGAGGACATCTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCA GAATCTGAGGCCACGGACTCTGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCACTACATGAGCGACCCCACCTACTACAAC TCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCACCCG GTCATCACCACGCAGAGCGCGGGCGGCGTCTACACCCCCGCTGGCCCCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCTTCGTGTGA >In-frame_VPS41_ENST00000395969_chr7_38835065_-_SDK1_ENST00000389531_chr7_4150295_+_3900nt ATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTG AAGTATGAAAGGCTTTCCAATGGGGTAACTGAAATACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTG GGCACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGGAACATCACTCAGAAGTTTGATGTAGTGCAGGTATTTGGACTGTATTCT GGAGAAGAATTTCACGAGACTTTTGACTGTCCCATTAAAATTATTGCTGTGCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTG ACCGGAGGGAAGAAGCTGCTACTGTTTGAACGGTCTTGGATGAACAGATGGAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGG AGTGTGAAGTGGAGAGGCCATCTGATTGCTTGGGCCAATAATATGGGTGTGAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAAT GTGCCCCGGGATGATATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCTCTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGG ACTTCTGTCAAGGTGGGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCTCTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAG ATCCCAAACCTCACACCCTACACTCACTACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGG GTCATCCAGACCCTGCAGGCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGG GTGCCCCTGCCGGATTCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTACAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCA GTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCC TTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGACGCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCA GCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATC CTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGC AAGTTCGTGCTCTACGAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAACGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAA GACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCC AACGGCATCATCCTGGGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTG AGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTG GAGGCCACCGTCATCACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGC CTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGG CAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAA GCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCT GTCTCAGCGACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATAC AGGATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTC ACAGATTTAAAGAAGTACCGGCGCTATGAAGTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTC TTTGTCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCA CCACCCCCGGAGAGCCAGAATGGGAACATCCAAGGCTACAAGATTTACTACTGGGAGGCAGACAGCCAGAACGAAACGGAGAAAATGAAG GTCCTCTTCCTCCCCGAGCCCGTGGTGAGGCTGAAGAACCTGACCAGCCATACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCC GGAGATGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCAGGCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACC TCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCCCT GTACAAGGGGTGAGCAAGGTGGTGACCGTGGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACC TATTTCTTCCGTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGC TCGCCTAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGC TATGTGATCGAGGCCCGGCCCTCAGATGAAGGCTTATGGGACATGTTTGTGAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGC CTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACG GCTGTGTCAGCTCAAGTGGAAGCCCCATTCTACGAGGAGTGGTGGTTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTG GTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTG ACCCTGGACAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGG TCCCCACCCCGGCCTAGCCCCGGCGGCCTGCACTACTCAGACGAGGACATCTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTG AGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACGGACTCTGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAAC CACTACATGAGCGACCCCACCTACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCG GGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCACGCAGAGCGCGGGCGGCGTCTACACCCCCGCTGGCCCCGGCGCGCGAACT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_VPS41_ENST00000310301_chr7_38835065_-_SDK1_ENST00000404826_chr7_4150295_+_7706nt AAGTGTGTGGTTTCCTCTTATTTCCGGGTCTGTCAGGTGACTCTCCCGTGGCGCCATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCT TGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTGAAGTATGAAAGGCTTTCCAATGGGGTAACTGAAAT ACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTGGGCACACATTATGGCAAGGTTTATTTACTTGATGT CCAGGGGAACATCACTCAGAAGTTTGATGTAAGTCCTGTGAAGATAAATCAGATTAGCTTGGATGAAAGTGGAGAGCACATGGGTGTGTG TTCAGAGGATGGCAAGGTGCAGGTATTTGGACTGTATTCTGGAGAAGAATTTCACGAGACTTTTGACTGTCCCATTAAAATTATTGCTGT GCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTGACCGGAGGGAAGAAGCTGCTACTGTTTGAACGGTCTTGGATGAACAGATG GAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGGAGTGTGAAGTGGAGAGGCCATCTGATTGCTTGGGCCAATAATATGGGTGT GAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAATGTGCCCCGGGATGATATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCT CTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGGACTTCTGTCAAGGTGGGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCT CTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCCAAACCTCACACCCTACACTCACTACAGATTTCGAATGAAGCAAGT GAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGGGTCATCCAGACCCTGCAGGCCCCACCCGACGTGGCTCCAACCAGCGTCAC GGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGGGTGCCCCTGCCGGATTCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTA CAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATTCACCATCGAGGA GCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGAC GCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCC GGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCG AGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTACGAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAA CGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAAGACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACT CACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCCAACGGCATCATCCTGGGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAG CCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAG GCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTGGAGGCCACCGTCATCACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAG AGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTA CTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGGCAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTTGA CAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAAGCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGT GACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCTGTCTCAGCGACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCC TCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATACAGGATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGC CAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGCCCAAAGCAGCTTCAAGACGGTGAACAGCAGCTCCACATCGACGAT GTGTGAACTAACACATTTAAAGAAGTACCGGCGCTATGAAGTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCC CGTGGAGGTCTTTGTCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCAC GTGGGACCCACCACCCCCGGAGAGCCAGAATGGGAACATCCAAGGCTACAAGATTTACTACTGGGAGGCAGACAGCCAGAACGAAACGGA GAAAATGAAGGTCCTCTTCCTCCCCGAGCCCGTGGTGAGGCTGAAGAACCTGACCAGCCATACCAAGTACCTGGTCAGCATATCAGCCTT CAACGCCGCCGGAGATGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCAGGCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTC AGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCC CTTGGCCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAA GGGAGTGACCTATTTCTTCCGTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCGAGGG ATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACC TACCACGGGCTATGTGATCGAGGCCCGGCCCTCAGATGAAGGCTTATGGGACATGTTTGTGAAGGACATCCCGCGGAGCGCCACATCCTA CACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAA CCCCTCCACGGCTGTGTCAGCTCAAGTGGAAGCCCCATTCTACGAGGAGTGGTGGTTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGT CATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGA GGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAA CGGGACCAGGTCCCCACCCCGGCCTAGCCCCGGCGGCCTGCACTACTCAGACGAGGACATCTGCAACAAGTACAACGGCGCCGTGCTGAC CGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACGGACTCTGACTACGAGGACGCGCTGCCCAAGCACTC CTTCGTGAACCACTACATGAGCGACCCCACCTACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGA GGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCACGCAGAGCGCGGGCGGCGTCTACACCCCCGCTGGCCCCGG CGCGCGAACTCCGCTCACCGGCTTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGT CTATTTTTGTTAAGACAATCAACTCCAATAACTGAGCTGAAGTTTTTGTTTAAAAAGAAAAAAATCTGATAAGTGATGATTTTACCTACT TGTGGACACTAGATTTCAATTAGGAAGGTTTTTTTAAACGGCTTTTTGTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTTCTTTTCT TTTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCC GTCTTCAAGACCAACTAGGAAGGGTCAAGCGGGGAGAGGGAGTGGAGGGTCAGGTGAGATCTCAGAGCTGCCCCGGCCGGCCCCCGTCTC TTTCTACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGT TTTTCCCTGGGCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCA GGTTCCTGACGGCCAGGCAGGGATGCTAAGGTGTGGCTCAGCCGTCACTGTCTGTGTCACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGC CTGTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGAGAGGGAAGCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCTTCCCCG AACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAAC CAGAGTATTTTTAAAATCTTTTTATCTTTTTTTAAACTATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAA TTGTTCAGCTTTGTACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCC TCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTGGCTTCTGCTGGCTGCTCGCAGCAGCCACCGCTTCTCCACCACTGGCGCTGCTGCT GCCCCCTCTCCCAGTCCGAGGCCAGCTTTTAGCCTTAACAGGTTTTTTGGAAATGTTTCTTTTTTTTATTTAAAATTGTCATTGTTTGGT TTAAATTTTTCAGCTAGATGAAAAGAGTATGAACTACTTTGGAAAACTTAACAGCTCAGAGATGGCCATGCCTCCAGCCCCTCACGTCAT CTTTGCAACAGACGACTGGGCTGCCATGGTCCACCCCTCAGCCCGGGTCCCGGGTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGG CGTGTGTGCCCCGGGTCCCTGTAAGTGCCCCCTCACCAGCAGCAGCGTGACACACACAAGACTCAAGACCACCCTGTCAGTGCCCCCCAG TGCACGGCAAACGGGCAGGTGCCGTTCCCCCAGTGACCTGAGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAG TCTCCTGGCCACATGCAGAAAGTGTGGCCCCTGCTTACCTAGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATT CTGTGCTGTCAGCGTTGCTGAGTATGGCCCCAGGAGACCAAGGAGAGTTTTGTATAGGCTGGAAAACCCCTTTTCAGTCTTTCCAAAATT AGAGGGTATGGCAAGTTTCCTTTTTTCTCTCCTCCCTTCCTTCCCCTCCTTCCTTTCCTTTACCCCTCCTTTCCTTCCTTCCTCCCTTCC TCTCTTCTTTCCTCCCTCCCTCCCTCCTTCCCTCCCTTCCTTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTCCCTTCC TCTCTCCCCTATTCCTTCTTCCTTTTCTCCTCCTTTTTCTGAGTGGAGGGGGAAATATTCTAAACCAAAAATCCTAGATGCTCTGCCCAA AGCCACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGGATGAGACTCACCACAGTGGACAGTGCCACCTCCTTCCCCTCGGCCCCGGA GAGGGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGGAATTTCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTC TGTGCACTCTGATGACTGCTCTCTGCAGCCATGAGGATGTGGCTTTACATGCCAGGGAGAGTGTTGAGACGTCTTAGGTTGAGGATGAGC AGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACAACATCATGACACTTCTGTTTCAAGCTCATGTTTTCCGTCTCCCCTCCACT CTTAGTAAACCTTGATCTGTACGGAGCGGCCTGTCCGAGGCTACGCCGGCCTCCTGGCTGCTGCTGGACTGTGCTTAGGACAGCGCCCAT GCCTCGGAGGGACTCTGTCCCATGAGAACCACCTGTGCAAAGGAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAGCAATG CGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCAGGGAAGGAAAAGAAAATCACAGCCTAGGAAGATGGAGGTTGGATTTTAAT CTCGGTTTTAAAAAGAGGACAAACAAAATGTCTCTAAGCCAGGCTAGATGGAATGTGCTCCCGCTCTCTCCTGCCGTGCTGAAAGTCATG CCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCCCCACCCACCCCCAACGTGGCTCATTTCAGATTGCTTCGGCCCCACCCTGCAA GGATGTGGTCACGGAGTGGCCAGGAGGCTCCGTCTGAGCCACAGGGATGGGTGTGCAGAGCTCCCTCCTCCTGGGGTGCCAGGGCAGAGA TTCCAGGCAGGTGAGCCCAGAGAGAGCTGCCAGGCCACACCCCCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATCGGTCCAGCCCAA GCCCCTCTCCCCAGCCTCGCCTTCAGCCTCTCTCCCAGCCTGCTTTTATAAGGCGCACTTCACTCAATGCTGTAGCCAAAAAACGAGGGG CCCCAGGGAGAGGGGACCCAGATGGCCACACACGGAACGCGCCTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCC GTGTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTTTGCCTAATGGTTCGTAGCATGGTTTTTATTTCTTACGCATTCTTGGCACA CAGTGTAGCTATCCTCCTGACGAGCAACCCGTCTGCGTACCTAAGTGTGGCTCCCCGTGGGTCAGCGTCCTGGTAGCATGGATCCAGTCT GAAAGGTGAGGACAACGTGGAAACTCATGAGCTGAGCCTGCCCGCTGGGACACGTCTCCTTCCCGCGTCACCTTCTGGTTTAGGGAGCCG TCAGGTCCCTAAACGTTCCCTACAACTTTTTCTGAAATTGTGCAGAAAAACAGATCTCATTAAAAGAAAAAAAGAAACAACTTGTAGGAA >In-frame_VPS41_ENST00000310301_chr7_38835065_-_SDK1_ENST00000389531_chr7_4150295_+_5054nt AAGTGTGTGGTTTCCTCTTATTTCCGGGTCTGTCAGGTGACTCTCCCGTGGCGCCATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCT TGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTGAAGTATGAAAGGCTTTCCAATGGGGTAACTGAAAT ACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTGGGCACACATTATGGCAAGGTTTATTTACTTGATGT CCAGGGGAACATCACTCAGAAGTTTGATGTAAGTCCTGTGAAGATAAATCAGATTAGCTTGGATGAAAGTGGAGAGCACATGGGTGTGTG TTCAGAGGATGGCAAGGTGCAGGTATTTGGACTGTATTCTGGAGAAGAATTTCACGAGACTTTTGACTGTCCCATTAAAATTATTGCTGT GCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTGACCGGAGGGAAGAAGCTGCTACTGTTTGAACGGTCTTGGATGAACAGATG GAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGGAGTGTGAAGTGGAGAGGCCATCTGATTGCTTGGGCCAATAATATGGGTGT GAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAATGTGCCCCGGGATGATATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCT CTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGGACTTCTGTCAAGGTGGGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCT CTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAGATCCCAAACCTCACACCCTACACTCACTACAGATTTCGAATGAAGCAAGT GAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGGGTCATCCAGACCCTGCAGGCCCCACCCGACGTGGCTCCAACCAGCGTCAC GGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGGGTGCCCCTGCCGGATTCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTA CAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCAGTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATTCACCATCGAGGA GCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCCTTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGAC GCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCAGCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCC GGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATCCTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCG AGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGCAAGTTCGTGCTCTACGAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAA CGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAAGACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACT CACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCCAACGGCATCATCCTGGGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAG CCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTGAGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAG GCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTGGAGGCCACCGTCATCACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAG AGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGCCTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTA CTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGGCAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTTGA CAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAAGCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGT GACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCTGTCTCAGCGACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCC TCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATACAGGATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGC CAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTCACAGATTTAAAGAAGTACCGGCGCTATGAAGTAATAATGACCGCCTATAA CATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGAC CCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGCCAGAATGGGAACATCCAAGGCTACAAGATTTACTA CTGGGAGGCAGACAGCCAGAACGAAACGGAGAAAATGAAGGTCCTCTTCCTCCCCGAGCCCGTGGTGAGGCTGAAGAACCTGACCAGCCA TACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCAGGCCGC CCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCAT CCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTGGAAGTGAGAGGGAACTGGCA GCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCTATTTCTTCCGTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGCTCCA AGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCA GTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGCTATGTGATCGAGGCCCGGCCCTCAGATGAAGGCTTATGGGACATGTTTGT GAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGT GAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAAGTGGAAGCCCCATTCTACGAGGAGTGGTGGTTCCT CCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTG CAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCT CAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCCGGCGGCCTGCACTACTCAGACGAGGACAT CTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACGGACTC TGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCACTACATGAGCGACCCCACCTACTACAACTCATGGAAGCGCAGGGCCCA GGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCACGCAGAGCGC GGGCGGCGTCTACACCCCCGCTGGCCCCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCCT CAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTCCAATAACTGAGCTGAAGTTTTTGTTTAAAAAGAAA AAAATCTGATAAGTGATGATTTTACCTACTTGTGGACACTAGATTTCAATTAGGAAGGTTTTTTTAAACGGCTTTTTGTAACTTCGCTGC AGGAAGCAGGTTTGTTTCTTTTTCTTTTCTTTTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGA CCTCAGACCTCCCCAGCCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAGGGTCAAGCGGGGAGAGGGAGTGGAGGGTCAGGTGAGAT CTCAGAGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGCAGGACATCCTC GGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTGAAATGTTCTCACTT GGCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATGCTAAGGTGTGGCTCAGCCGTCACTGTCTGTGTCAC TGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGAGAGGGAAGCCTCTTAGGGCTGG AAGCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTG CTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAAATCTTTTTATCTTTTTTTAAACTATGTCACATGAAATGAATGCGT CTTTGCTGTCTCCAGGTGCCTTTTTATTAATTGTTCAGCTTTGTACATGGGAAAGATGAAAAGCAACAGTGTCTGCAAATAAAGCAAAAC >In-frame_VPS41_ENST00000395969_chr7_38835065_-_SDK1_ENST00000404826_chr7_4150295_+_7576nt ATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTG AAGTATGAAAGGCTTTCCAATGGGGTAACTGAAATACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTG GGCACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGGAACATCACTCAGAAGTTTGATGTAGTGCAGGTATTTGGACTGTATTCT GGAGAAGAATTTCACGAGACTTTTGACTGTCCCATTAAAATTATTGCTGTGCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTG ACCGGAGGGAAGAAGCTGCTACTGTTTGAACGGTCTTGGATGAACAGATGGAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGG AGTGTGAAGTGGAGAGGCCATCTGATTGCTTGGGCCAATAATATGGGTGTGAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAAT GTGCCCCGGGATGATATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCTCTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGG ACTTCTGTCAAGGTGGGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCTCTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAG ATCCCAAACCTCACACCCTACACTCACTACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGG GTCATCCAGACCCTGCAGGCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGG GTGCCCCTGCCGGATTCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTACAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCA GTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCC TTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGACGCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCA GCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATC CTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGC AAGTTCGTGCTCTACGAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAACGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAA GACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCC AACGGCATCATCCTGGGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTG AGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTG GAGGCCACCGTCATCACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGC CTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGG CAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAA GCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCT GTCTCAGCGACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATAC AGGATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTC ACAGCCCAAAGCAGCTTCAAGACGGTGAACAGCAGCTCCACATCGACGATGTGTGAACTAACACATTTAAAGAAGTACCGGCGCTATGAA GTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTCTTTGTCGGCGAGGCTGCCCCGGCCATGGCC CCGCAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCACCACCCCCGGAGAGCCAGAATGGGAACATC CAAGGCTACAAGATTTACTACTGGGAGGCAGACAGCCAGAACGAAACGGAGAAAATGAAGGTCCTCTTCCTCCCCGAGCCCGTGGTGAGG CTGAAGAACCTGACCAGCCATACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCCGGAGATGGACCTAAGAGTGACCCCCAGCAG GGGCGCACCCACCAGGCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACCTCCACCACGCTCAACGTGTCCTGGGGCGAG CCTGCGGCGGCCAACGGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCCCTGTACAAGGGGTGAGCAAGGTGGTGACCGTG GAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACCTATTTCTTCCGTGTCCAAGCGCGGACCATC ACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGCTCGCCTAGAGATGTCCTGGTCACCAAGTCC GCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGCTATGTGATCGAGGCCCGGCCCTCAGATGAA GGCTTATGGGACATGTTTGTGAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGCCTGGATAAGCTCCGGCAAGGAGTGACTTAC GAGTTCCGGGTGGTGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACGGCTGTGTCAGCTCAAGTGGAAGCCCCATTC TACGAGGAGTGGTGGTTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTGGTGGTGTTCGCCCTCGTCCTGCACGGGCAG AATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTGACCCTGGACAACGGAGGATTTGCTGCCCTG GAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGGTCCCCACCCCGGCCTAGCCCCGGCGGCCTG CACTACTCAGACGAGGACATCTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTGAGCCTCAAGGAGAAGTCGGCAGATGCATCA GAATCTGAGGCCACGGACTCTGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAACCACTACATGAGCGACCCCACCTACTACAAC TCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCGGGCTCCGAGGCGGGCGCGCAGCTGCACCCG GTCATCACCACGCAGAGCGCGGGCGGCGTCTACACCCCCGCTGGCCCCGGCGCGCGAACTCCGCTCACCGGCTTCTCCTCCTTCGTGTGA GCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGTTAAGACAATCAACTCCAATAACTGAGCTGA AGTTTTTGTTTAAAAAGAAAAAAATCTGATAAGTGATGATTTTACCTACTTGTGGACACTAGATTTCAATTAGGAAGGTTTTTTTAAACG GCTTTTTGTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTTCTTTTCTTTTTAAGAGAAGGTGTATTTCACTGGTGCAATGGCTTGGC ACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCCGTCTTCAAGACCAACTAGGAAGGGTCAAGCGGGGAGAGGG AGTGGAGGGTCAGGTGAGATCTCAGAGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTCCTCTTCCAGAGAACCAGCGGCTCACACCCT TCTCAACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGGGCTCAGTGCGTTTTGTCCCAACTTCATCTG TTTCTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGACGGCCAGGCAGGGATGCTAAGGTGTGGCTCA GCCGTCACTGTCTGTGTCACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGTCTTTCCCCCTTCCTTCTCACCTGACAGCGAGGGAGA GGGAAGCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCACACGGTCAACTCCGCGGGACACGAGGACACG GGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTTTTAAAATCTTTTTATCTTTTTTTAAACTAT GTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAATTGTTCAGCTTTGTACATGGGAAAGATGAAAAGCAACAGT GTCTGCAAATAAAGCAAAACAGCTCTGAGAACACACGCTCCCGACTCGCCTCGTGCACACCAGGCCGTCCCCTCCCTCTGTCCTGGCTTC TGCTGGCTGCTCGCAGCAGCCACCGCTTCTCCACCACTGGCGCTGCTGCTGCCCCCTCTCCCAGTCCGAGGCCAGCTTTTAGCCTTAACA GGTTTTTTGGAAATGTTTCTTTTTTTTATTTAAAATTGTCATTGTTTGGTTTAAATTTTTCAGCTAGATGAAAAGAGTATGAACTACTTT GGAAAACTTAACAGCTCAGAGATGGCCATGCCTCCAGCCCCTCACGTCATCTTTGCAACAGACGACTGGGCTGCCATGGTCCACCCCTCA GCCCGGGTCCCGGGTCTGGATGGAACGGGAGCACTGCTGGTGCCCACTGGCGTGTGTGCCCCGGGTCCCTGTAAGTGCCCCCTCACCAGC AGCAGCGTGACACACACAAGACTCAAGACCACCCTGTCAGTGCCCCCCAGTGCACGGCAAACGGGCAGGTGCCGTTCCCCCAGTGACCTG AGGGTAGGGGACAACTGAGCAGTATCTGACCAGTGCCACCCAGGAGCCAGTCTCCTGGCCACATGCAGAAAGTGTGGCCCCTGCTTACCT AGATGTTTTGTGCACCTCCATGGGCAGAGGGTGTGGATATTGCCTGGATTCTGTGCTGTCAGCGTTGCTGAGTATGGCCCCAGGAGACCA AGGAGAGTTTTGTATAGGCTGGAAAACCCCTTTTCAGTCTTTCCAAAATTAGAGGGTATGGCAAGTTTCCTTTTTTCTCTCCTCCCTTCC TTCCCCTCCTTCCTTTCCTTTACCCCTCCTTTCCTTCCTTCCTCCCTTCCTCTCTTCTTTCCTCCCTCCCTCCCTCCTTCCCTCCCTTCC TTCCTCTCTTTCCTCCTTCCTTCCCTCCCTTCTTTCCCTCCCTCCCTTCCTCTCTCCCCTATTCCTTCTTCCTTTTCTCCTCCTTTTTCT GAGTGGAGGGGGAAATATTCTAAACCAAAAATCCTAGATGCTCTGCCCAAAGCCACTTCTGCATGAGAATCGCAACCCACAGTTCCCCGG ATGAGACTCACCACAGTGGACAGTGCCACCTCCTTCCCCTCGGCCCCGGAGAGGGCGAAGTGGGCGGGAAGCCAGGATGTGAGCACTGGA ATTTCTTGGAAGAGAAGCGATAAATGGAGACCATGGCCAGCGCTGCTTTCTGTGCACTCTGATGACTGCTCTCTGCAGCCATGAGGATGT GGCTTTACATGCCAGGGAGAGTGTTGAGACGTCTTAGGTTGAGGATGAGCAGATTCGAGATATGTTTGTTGCTCTCGGGTTTTCGATACA ACATCATGACACTTCTGTTTCAAGCTCATGTTTTCCGTCTCCCCTCCACTCTTAGTAAACCTTGATCTGTACGGAGCGGCCTGTCCGAGG CTACGCCGGCCTCCTGGCTGCTGCTGGACTGTGCTTAGGACAGCGCCCATGCCTCGGAGGGACTCTGTCCCATGAGAACCACCTGTGCAA AGGAACAGAGCTGGATGTTTCCAGGTAGATTTTGGCCTCCCAGAGCAATGCGGCATTTGAGAAGCAACAGTTCCTAACTCCTTATCTTCA GGGAAGGAAAAGAAAATCACAGCCTAGGAAGATGGAGGTTGGATTTTAATCTCGGTTTTAAAAAGAGGACAAACAAAATGTCTCTAAGCC AGGCTAGATGGAATGTGCTCCCGCTCTCTCCTGCCGTGCTGAAAGTCATGCCTTGCGGATGCCTCATGACAGCAGTGGCTGAGTCTCCCC ACCCACCCCCAACGTGGCTCATTTCAGATTGCTTCGGCCCCACCCTGCAAGGATGTGGTCACGGAGTGGCCAGGAGGCTCCGTCTGAGCC ACAGGGATGGGTGTGCAGAGCTCCCTCCTCCTGGGGTGCCAGGGCAGAGATTCCAGGCAGGTGAGCCCAGAGAGAGCTGCCAGGCCACAC CCCCTCGGCCTCCTGCACGGCCACCTTCTGGGTGAATCGGTCCAGCCCAAGCCCCTCTCCCCAGCCTCGCCTTCAGCCTCTCTCCCAGCC TGCTTTTATAAGGCGCACTTCACTCAATGCTGTAGCCAAAAAACGAGGGGCCCCAGGGAGAGGGGACCCAGATGGCCACACACGGAACGC GCCTCCACAGCCCCGGGAGGTGGCTCACTCTGTACAGGTCTTCGGAGGCCGTGTTTGTATCTAACTGTGACTGGGCTGAAGCATGATGTT TGCCTAATGGTTCGTAGCATGGTTTTTATTTCTTACGCATTCTTGGCACACAGTGTAGCTATCCTCCTGACGAGCAACCCGTCTGCGTAC CTAAGTGTGGCTCCCCGTGGGTCAGCGTCCTGGTAGCATGGATCCAGTCTGAAAGGTGAGGACAACGTGGAAACTCATGAGCTGAGCCTG CCCGCTGGGACACGTCTCCTTCCCGCGTCACCTTCTGGTTTAGGGAGCCGTCAGGTCCCTAAACGTTCCCTACAACTTTTTCTGAAATTG TGCAGAAAAACAGATCTCATTAAAAGAAAAAAAGAAACAACTTGTAGGAAGACAGAGAGGTGCTATGGGTACAATTTTTAATAAAAACAT >In-frame_VPS41_ENST00000395969_chr7_38835065_-_SDK1_ENST00000389531_chr7_4150295_+_4924nt ATGGCGGAAGCAGAGGAGCAGGAAACTGGGTCCCTTGAAGAATCTACAGATGAGTCTGAGGAAGAAGAGAGCGAAGAGGAACCCAAGCTG AAGTATGAAAGGCTTTCCAATGGGGTAACTGAAATACTTCAGAAGGATGCAGCTAGCTGCATGACAGTCCATGACAAGTTTTTGGCATTG GGCACACATTATGGCAAGGTTTATTTACTTGATGTCCAGGGGAACATCACTCAGAAGTTTGATGTAGTGCAGGTATTTGGACTGTATTCT GGAGAAGAATTTCACGAGACTTTTGACTGTCCCATTAAAATTATTGCTGTGCACCCACATTTCGTGAGATCCAGTTGCAAGCAGTTTGTG ACCGGAGGGAAGAAGCTGCTACTGTTTGAACGGTCTTGGATGAACAGATGGAAGTCTGCTGTTCTGCATGAAGGGGAAGGGAACATAAGG AGTGTGAAGTGGAGAGGCCATCTGATTGCTTGGGCCAATAATATGGGTGTGAAGATTTTTGACATCATCTCAAAGCAAAGAATCACCAAT GTGCCCCGGGATGATATAAGTCTTCGCCCAGACATGTATCCCTGCAGCCTCTGCTGGAAGGACAATGTGACACTGATTATTGGCTGGGGG ACTTCTGTCAAGGTGGGAGCTATCGGCGACGAGGAGGAGTGGGTCACCCTCTATGAAGAGGAGAATGAGCCTGATGCCCAGATGCTGGAG ATCCCAAACCTCACACCCTACACTCACTACAGATTTCGAATGAAGCAAGTGAACATTGTTGGGCCGAGCCCCTACAGTCCGTCTTCCCGG GTCATCCAGACCCTGCAGGCCCCACCCGACGTGGCTCCAACCAGCGTCACGGTCCGTACTGCCAGTGAGACCAGCCTGCGGCTTCGCTGG GTGCCCCTGCCGGATTCTCAGTACAACGGGAACCCCGAGTCCGTGGGCTACAGGATTAAGTACTGGCGCTCAGACCTCCAGTCCTCAGCA GTGGCCCAAGTCGTCAGTGACCGGCTGGAGAGAGAATTCACCATCGAGGAGCTGGAGGAGTGGATGGAATACGAGCTGCAGATGCAGGCC TTCAACGCCGTCGGGGCTGGGCCGTGGAGCGAGGTGGTGCGGGGCCGGACGCGGGAGTCAGTTCCTTCAGCCGCCCCTGAGAACGTGTCA GCCGAGGCTGTCAGCTCGACCCAGATTTTACTGACATGGACATCCGTGCCGGAACAGGACCAGAATGGGCTCATACTGGGCTACAAGATC CTGTTCCGGGCCAAAGACCTGGATCCCGAGCCCAGGAGCCACATCGTGCGAGGGAACCACACGCAGTCGGCCCTGCTGGCAGGCCTGCGC AAGTTCGTGCTCTACGAGCTCCAGGTGCTGGCGTTCACCCGCATCGGGAACGGGGTCCCCAGCACGCCCCTCATCCTGGAGCGCACCAAA GACGATGCCCCAGGCCCACCAGTGAGGCTCGTGTTCCCCGAAGTGAGACTCACCTCCGTGCGGATAGTGTGGCAACCTCCGGAGGAGCCC AACGGCATCATCCTGGGGTACCAGATTGCCTACCGCCTGGCCAGCAGCAGCCCCCACACCTTCACCACCGTGGAGGTCGGCGCCACAGTG AGGCAGTTCACAGCCACCGACCTGGCCCCGGAGTCCGCATACATCTTCAGGCTGTCCGCCAAGACGAGGCAGGGCTGGGGGGAGCCACTG GAGGCCACCGTCATCACCACCGAGAAGAGAGAGCGGCCGGCACCCCCCAGAGAGCTCCTGGTGCCCCAGGCAGAAGTGACCGCACGCAGC CTCCGGCTCCAGTGGGTCCCGGGCAGCGACGGGGCCTCCCCCATCCGGTACTTCACCATGCAGGTGCGAGAGCTGCCTCGGGGTGAGTGG CAGACCTACTCCTCGTCCATCAGCCATGAGGCGACAGCATGCGTCGTTGACAGACTGAGGCCCTTCACCTCCTACAAGCTGCGCCTGAAA GCCACCAACGACATTGGGGACAGTGACTTCAGTTCAGAGACAGAGGCGGTGACCACGCTGCAGGATGTTCCAGGAGAGCCCCCGGGATCT GTCTCAGCGACGCCACACACCACGTCCTCTGTCCTGATACAGTGGCAGCCTCCGAGGGACGAAAGCCTGAATGGCCTTCTTCAGGGATAC AGGATCTACTACAGGGAGCTGGAGTATGAAGCCGGGTCAGGCACTGAGGCCAAGACGCTCAAAAACCCTATAGCTTTACATGCTGAGCTC ACAGATTTAAAGAAGTACCGGCGCTATGAAGTAATAATGACCGCCTATAACATCATCGGCGAGAGCCCAGCCAGCGCGCCCGTGGAGGTC TTTGTCGGCGAGGCTGCCCCGGCCATGGCCCCGCAGAACGTGCAGGTGACCCCACTCACGGCCAGCCAGCTGGAGGTCACGTGGGACCCA CCACCCCCGGAGAGCCAGAATGGGAACATCCAAGGCTACAAGATTTACTACTGGGAGGCAGACAGCCAGAACGAAACGGAGAAAATGAAG GTCCTCTTCCTCCCCGAGCCCGTGGTGAGGCTGAAGAACCTGACCAGCCATACCAAGTACCTGGTCAGCATATCAGCCTTCAACGCCGCC GGAGATGGACCTAAGAGTGACCCCCAGCAGGGGCGCACCCACCAGGCCGCCCCTGGGGCCCCCAGCTTTCTGGCGTTCTCAGAAATAACC TCCACCACGCTCAACGTGTCCTGGGGCGAGCCTGCGGCGGCCAACGGCATCCTGCAGGGCTATCGGGTGGTGTACGAGCCCTTGGCCCCT GTACAAGGGGTGAGCAAGGTGGTGACCGTGGAAGTGAGAGGGAACTGGCAGCGCTGGCTGAAGGTGCGGGACCTCACCAAGGGAGTGACC TATTTCTTCCGTGTCCAAGCGCGGACCATCACCTACGGGCCCGAGCTCCAAGCCAATATCACAGCCGGGCCAGCCGAGGGATCCCCGGGC TCGCCTAGAGATGTCCTGGTCACCAAGTCCGCCTCTGAACTGACGCTGCAGTGGACTGAGGGACACTCTGGCGACACACCTACCACGGGC TATGTGATCGAGGCCCGGCCCTCAGATGAAGGCTTATGGGACATGTTTGTGAAGGACATCCCGCGGAGCGCCACATCCTACACCCTCAGC CTGGATAAGCTCCGGCAAGGAGTGACTTACGAGTTCCGGGTGGTGGCTGTGAATGAGGCGGGCTACGGGGAGCCCAGCAACCCCTCCACG GCTGTGTCAGCTCAAGTGGAAGCCCCATTCTACGAGGAGTGGTGGTTCCTCCTGGTGATGGCTCTGTCCAGCCTGATCGTCATCCTGCTG GTGGTGTTCGCCCTCGTCCTGCACGGGCAGAATAAGAAGTATAAGAACTGCAGCACAGGAAAGGGGATCTCCACCATGGAGGAGTCTGTG ACCCTGGACAACGGAGGATTTGCTGCCCTGGAGCTCAGCAGCCGCCACCTCAATGTCAAGAGCACCTTCTCCAAGAAGAACGGGACCAGG TCCCCACCCCGGCCTAGCCCCGGCGGCCTGCACTACTCAGACGAGGACATCTGCAACAAGTACAACGGCGCCGTGCTGACCGAGAGCGTG AGCCTCAAGGAGAAGTCGGCAGATGCATCAGAATCTGAGGCCACGGACTCTGACTACGAGGACGCGCTGCCCAAGCACTCCTTCGTGAAC CACTACATGAGCGACCCCACCTACTACAACTCATGGAAGCGCAGGGCCCAGGGCCGCGCACCTGCGCCGCACAGGTACGAGGCGGTGGCG GGCTCCGAGGCGGGCGCGCAGCTGCACCCGGTCATCACCACGCAGAGCGCGGGCGGCGTCTACACCCCCGCTGGCCCCGGCGCGCGAACT CCGCTCACCGGCTTCTCCTCCTTCGTGTGAGCAAAGCGCCGCGCCTCCCTCAGGGCGGAACGGAGGCAACTTTCCGGAGTCTATTTTTGT TAAGACAATCAACTCCAATAACTGAGCTGAAGTTTTTGTTTAAAAAGAAAAAAATCTGATAAGTGATGATTTTACCTACTTGTGGACACT AGATTTCAATTAGGAAGGTTTTTTTAAACGGCTTTTTGTAACTTCGCTGCAGGAAGCAGGTTTGTTTCTTTTTCTTTTCTTTTTAAGAGA AGGTGTATTTCACTGGTGCAATGGCTTGGCACCTCCGGGGCCTGGGAGGACCTCAGACCTCCCCAGCCCTGGGTTTCTCCGTCTTCAAGA CCAACTAGGAAGGGTCAAGCGGGGAGAGGGAGTGGAGGGTCAGGTGAGATCTCAGAGCTGCCCCGGCCGGCCCCCGTCTCTTTCTACCTC CTCTTCCAGAGAACCAGCGGCTCACACCCTTCTCAACGCAGGACATCCTCGGCGGCTCCTGGGGTTTGAAGAGCAAACGTTTTTCCCTGG GCTCAGTGCGTTTTGTCCCAACTTCATCTGTTTCTGAAATGTTCTCACTTGGCAGTGTCTAGTCAAGGAGTCGGCTTTCAGGTTCCTGAC GGCCAGGCAGGGATGCTAAGGTGTGGCTCAGCCGTCACTGTCTGTGTCACTGCAGTGGTGCGGTCCTCAGGCTTTTCTGCCTGTCTTTCC CCCTTCCTTCTCACCTGACAGCGAGGGAGAGGGAAGCCTCTTAGGGCTGGAAGCCACCACGCTGGCCCTCTCCTTCCCCGAACACAGCAC ACGGTCAACTCCGCGGGACACGAGGACACGGGACGGCGTCTCCAGAATTGCTTGTTACGTAGGAAGCGTGCATTGTTAACCAGAGTATTT TTAAAATCTTTTTATCTTTTTTTAAACTATGTCACATGAAATGAATGCGTCTTTGCTGTCTCCAGGTGCCTTTTTATTAATTGTTCAGCT |
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FusionGenePPI for VPS41_SDK1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| VPS41 | UBE2U, HOOK1, HOOK2, HOOK3, AKTIP, VIPAS39, VPS33B, APP, VPS18, VPS16, VPS33A, UTP20, XRCC4, HSP90AA1, MON1B, ZNF512B, CT55, TGFBRAP1, VPS11, RILP, RAB7A, NABP2, TCEAL4, KDM5C, AP3D1, CLTB, STX17, PTAR1, TECPR2 | SDK1 | LNX1, UBC, MYC, PRPF40A, LGALS3, LGALS8 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | VPS41 | chr7:38835065 | chr7:4150295 | ENST00000310301 | - | 9 | 29 | 1_540 | 239 | 855 | ARL8B |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for VPS41_SDK1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for VPS41_SDK1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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