|
||||||
|
 | |
| |
| |
| |
| |
|
Fusion gene ID: 41558 |
FusionGeneSummary for VPS18_NTRK3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: VPS18_NTRK3 | Fusion gene ID: 41558 | Hgene | Tgene | Gene symbol | VPS18 | NTRK3 | Gene ID | 57617 | 4916 |
| Gene name | VPS18, CORVET/HOPS core subunit | neurotrophic receptor tyrosine kinase 3 | |
| Synonyms | PEP3 | GP145-TrkC|TRKC|gp145(trkC) | |
| Cytomap | 15q15.1 | 15q25.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | vacuolar protein sorting-associated protein 18 homologhVPS18vacuolar protein sorting 18 homologvacuolar protein sorting protein 18 | NT-3 growth factor receptorETS related protein-neurotrophic receptor tyrosine kinase fusion proteinETV6-NTRK3 fusionneurotrophic tyrosine kinase, receptor, type 3tyrosine kinase receptor C | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q9P253 | Q16288 | |
| Ensembl transtripts involved in fusion gene | ENST00000220509, ENST00000558474, | ENST00000394480, ENST00000557856, ENST00000357724, ENST00000355254, ENST00000360948, ENST00000542733, ENST00000558676, ENST00000317501, ENST00000558306, ENST00000540489, | |
| Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 9 X 7 X 9=567 |
| # samples | 3 | 20 | |
| ** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(20/567*10)=-1.5033487351675 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: VPS18 [Title/Abstract] AND NTRK3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. Kinase involved fusion gene, inframe and retained kinase domain. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | VPS18 | GO:0007032 | endosome organization | 18799622 |
| Hgene | VPS18 | GO:0007040 | lysosome organization | 18799622 |
| Tgene | NTRK3 | GO:0000187 | activation of MAPK activity | 23027130 |
| Tgene | NTRK3 | GO:0001933 | negative regulation of protein phosphorylation | 23027130 |
| Tgene | NTRK3 | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | 23027130 |
| Tgene | NTRK3 | GO:0008284 | positive regulation of cell proliferation | 23027130 |
| Tgene | NTRK3 | GO:0010628 | positive regulation of gene expression | 23027130 |
| Tgene | NTRK3 | GO:0030335 | positive regulation of cell migration | 23027130 |
| Tgene | NTRK3 | GO:0032148 | activation of protein kinase B activity | 23027130 |
| Tgene | NTRK3 | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | 23027130 |
| Tgene | NTRK3 | GO:0050927 | positive regulation of positive chemotaxis | 23027130 |
| Tgene | NTRK3 | GO:0090630 | activation of GTPase activity | 23027130 |
| Tgene | NTRK3 | GO:2000251 | positive regulation of actin cytoskeleton reorganization | 23027130 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | COAD | TCGA-A6-2674-01A | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000220509 | ENST00000394480 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| In-frame | ENST00000220509 | ENST00000557856 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| In-frame | ENST00000220509 | ENST00000357724 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| In-frame | ENST00000220509 | ENST00000355254 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| In-frame | ENST00000220509 | ENST00000360948 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| 5CDS-intron | ENST00000220509 | ENST00000542733 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| 5CDS-intron | ENST00000220509 | ENST00000558676 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| 5CDS-intron | ENST00000220509 | ENST00000317501 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| 5CDS-intron | ENST00000220509 | ENST00000558306 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| 5CDS-intron | ENST00000220509 | ENST00000540489 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-3CDS | ENST00000558474 | ENST00000394480 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-3CDS | ENST00000558474 | ENST00000557856 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-3CDS | ENST00000558474 | ENST00000357724 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-3CDS | ENST00000558474 | ENST00000355254 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-3CDS | ENST00000558474 | ENST00000360948 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-intron | ENST00000558474 | ENST00000542733 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-intron | ENST00000558474 | ENST00000558676 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-intron | ENST00000558474 | ENST00000317501 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-intron | ENST00000558474 | ENST00000558306 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
| intron-intron | ENST00000558474 | ENST00000540489 | VPS18 | chr15 | 41193212 | + | NTRK3 | chr15 | 88423659 | - |
Top |
FusionProtFeatures for VPS18_NTRK3 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| VPS18 | NTRK3 |
| Plays a role in vesicle-mediated protein trafficking tolysosomal compartments including the endocytic membrane transportand autophagic pathways. Believed to act as a core component ofthe putative HOPS and CORVET endosomal tethering complexes whichare proposed to be involved in the Rab5-to-Rab7 endosomeconversion probably implicating MON1A/B, and via binding SNAREsand SNARE complexes to mediate tethering and docking events duringSNARE-mediated membrane fusion. The HOPS complex is proposed to berecruited to Rab7 on the late endosomal membrane and to regulatelate endocytic, phagocytic and autophagic traffic towardslysosomes. The CORVET complex is proposed to function as a Rab5effector to mediate early endosome fusion probably in specificendosome subpopulations (PubMed:11382755, PubMed:23351085,PubMed:24554770, PubMed:25783203). Required for fusion ofendosomes and autophagosomes with lysosomes (PubMed:25783203).Involved in dendrite development of Pukinje cells (By similarity).{ECO:0000250|UniProtKB:Q8R307, ECO:0000269|PubMed:25783203,ECO:0000305|PubMed:11382755, ECO:0000305|PubMed:23351085,ECO:0000305|PubMed:25783203}. | Receptor tyrosine kinase involved in nervous system andprobably heart development. Upon binding of its ligandNTF3/neurotrophin-3, NTRK3 autophosphorylates and activatesdifferent signaling pathways, including the phosphatidylinositol3-kinase/AKT and the MAPK pathways, that control cell survival anddifferentiation. {ECO:0000269|PubMed:25196463}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | VPS18 | chr15:41193212 | chr15:88423659 | ENST00000220509 | + | 4 | 5 | 454_481 | 732 | 974 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 160_209 | -54 | 613 | Domain | Note=LRRCT |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 210_300 | -54 | 613 | Domain | Note=Ig-like C2-type 1 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 309_382 | -54 | 613 | Domain | Note=Ig-like C2-type 2 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 538_839 | -54 | 613 | Domain | Protein kinase |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 160_209 | -2 | 613 | Domain | Note=LRRCT |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 210_300 | -2 | 613 | Domain | Note=Ig-like C2-type 1 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 309_382 | -2 | 613 | Domain | Note=Ig-like C2-type 2 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 538_839 | -2 | 613 | Domain | Protein kinase |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 544_552 | -54 | 613 | Nucleotide binding | ATP |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 544_552 | -2 | 613 | Nucleotide binding | ATP |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 104_125 | -54 | 613 | Repeat | Note=LRR 1 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 128_149 | -54 | 613 | Repeat | Note=LRR 2 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 104_125 | -2 | 613 | Repeat | Note=LRR 1 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 128_149 | -2 | 613 | Repeat | Note=LRR 2 |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 32_429 | -54 | 613 | Topological domain | Extracellular |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 454_839 | -54 | 613 | Topological domain | Cytoplasmic |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 32_429 | -2 | 613 | Topological domain | Extracellular |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 454_839 | -2 | 613 | Topological domain | Cytoplasmic |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000317501 | - | 0 | 15 | 430_453 | -54 | 613 | Transmembrane | Helical |
| Tgene | >NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000540489 | - | 0 | 14 | 430_453 | -2 | 613 | Transmembrane | Helical |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >VPS18 | chr15:41193212 | chr15:88423659 | ENST00000220509 | + | 4 | 5 | 802_848 | 732 | 974 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >VPS18 | chr15:41193212 | chr15:88423659 | ENST00000220509 | + | 4 | 5 | 618_772 | 732 | 974 | Repeat | Note=CHCR |
| Hgene | >VPS18 | chr15:41193212 | chr15:88423659 | ENST00000220509 | + | 4 | 5 | 853_947 | 732 | 974 | Zinc finger | Note=RING-type |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 160_209 | 711 | 826 | Domain | Note=LRRCT |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 210_300 | 711 | 826 | Domain | Note=Ig-like C2-type 1 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 309_382 | 711 | 826 | Domain | Note=Ig-like C2-type 2 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 538_839 | 711 | 826 | Domain | Protein kinase |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 160_209 | 725 | 840 | Domain | Note=LRRCT |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 210_300 | 725 | 840 | Domain | Note=Ig-like C2-type 1 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 309_382 | 725 | 840 | Domain | Note=Ig-like C2-type 2 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 538_839 | 725 | 840 | Domain | Protein kinase |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 160_209 | 711 | 826 | Domain | Note=LRRCT |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 210_300 | 711 | 826 | Domain | Note=Ig-like C2-type 1 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 309_382 | 711 | 826 | Domain | Note=Ig-like C2-type 2 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 538_839 | 711 | 826 | Domain | Protein kinase |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 544_552 | 711 | 826 | Nucleotide binding | ATP |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 544_552 | 725 | 840 | Nucleotide binding | ATP |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 544_552 | 711 | 826 | Nucleotide binding | ATP |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 104_125 | 711 | 826 | Repeat | Note=LRR 1 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 128_149 | 711 | 826 | Repeat | Note=LRR 2 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 104_125 | 725 | 840 | Repeat | Note=LRR 1 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 128_149 | 725 | 840 | Repeat | Note=LRR 2 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 104_125 | 711 | 826 | Repeat | Note=LRR 1 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 128_149 | 711 | 826 | Repeat | Note=LRR 2 |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 32_429 | 711 | 826 | Topological domain | Extracellular |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 454_839 | 711 | 826 | Topological domain | Cytoplasmic |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 32_429 | 725 | 840 | Topological domain | Extracellular |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 454_839 | 725 | 840 | Topological domain | Cytoplasmic |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 32_429 | 711 | 826 | Topological domain | Extracellular |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 454_839 | 711 | 826 | Topological domain | Cytoplasmic |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000355254 | - | 15 | 18 | 430_453 | 711 | 826 | Transmembrane | Helical |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000360948 | - | 16 | 19 | 430_453 | 725 | 840 | Transmembrane | Helical |
| Tgene | NTRK3 | chr15:41193212 | chr15:88423659 | ENST00000394480 | - | 16 | 19 | 430_453 | 711 | 826 | Transmembrane | Helical |
Top |
FusionGeneSequence for VPS18_NTRK3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000394480_chr15_88423659_-_847aa MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSLVVSSNQLCMSLGKDTLLRIDLGKANEPNHV ELGRKDDAKVHKMFLDHTGSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSEL AFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQ SYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPAL VNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL ELYEEAVDLALQVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVM >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000557856_chr15_88423659_-_847aa MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSLVVSSNQLCMSLGKDTLLRIDLGKANEPNHV ELGRKDDAKVHKMFLDHTGSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSEL AFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQ SYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPAL VNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL ELYEEAVDLALQVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVM >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000357724_chr15_88423659_-_847aa MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSLVVSSNQLCMSLGKDTLLRIDLGKANEPNHV ELGRKDDAKVHKMFLDHTGSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSEL AFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQ SYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPAL VNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL ELYEEAVDLALQVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVM >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000355254_chr15_88423659_-_847aa MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSLVVSSNQLCMSLGKDTLLRIDLGKANEPNHV ELGRKDDAKVHKMFLDHTGSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSEL AFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQ SYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPAL VNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL ELYEEAVDLALQVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVM >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000360948_chr15_88423659_-_847aa MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSLVVSSNQLCMSLGKDTLLRIDLGKANEPNHV ELGRKDDAKVHKMFLDHTGSHLLIALSSTEVLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSEL AFYTPKLRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQ SYFEEIALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPAL VNYSQGGEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL ELYEEAVDLALQVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVM |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000394480_chr15_88423659_-_2541nt ATGGCGTCCATCCTGGATGAGTACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCG GGGTATGTGAATGCCCAGCTGGAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTT GTCGTCTCCAGCAATCAGCTGTGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTG GAGCTGGGACGTAAGGATGACGCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAG GTCCTCTACGTGAACCGAAATGGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCA CTGGGCACGGAGAGCAGCACAGGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGG CTTTTCGGCCCTGCTCCGGATCTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCC GAGCGGGGCCCTGATGGGCGTAGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAG GCCCAGGGTTTCTCAGGGCTCTTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTG GCCTTCTACACCCCCAAGCTGCGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGG CGCCCTGACTCTCTGCTGAGCGAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTG ACCCAGTTCCACTTCCTGCTGCTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTG GAGAAATTTGGGCCGCTGAAGCACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCAC GTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGAC TGCCTGGACACGGTCCTGGCCCGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAG AGCTACTTTGAGGAGATTGCCCTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTG AAGCCAGCCGAACGTACCCAGGCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCA GAGGCCCTGACTCTCTACCGAGAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGG GCCTCTATCCATGAGCTGCTCGCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTG GCTTACCACTGTCAGCACGAGGCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCC ATCCTCATCCGTCACATCCCCCGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTG GTGAACTACAGCCAGGGTGGTGAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAG CAGGCCATCCACAACTACCTGCTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCC CACCGGGTGCATTACGACCTCAAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTA GAGCTGTATGAGGAGGCCGTGGACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATG TACCGGAAGTTCACTACAGAGAGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAA CTCTCAAACACGGAGGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATG CTGGGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATC >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000557856_chr15_88423659_-_2541nt ATGGCGTCCATCCTGGATGAGTACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCG GGGTATGTGAATGCCCAGCTGGAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTT GTCGTCTCCAGCAATCAGCTGTGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTG GAGCTGGGACGTAAGGATGACGCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAG GTCCTCTACGTGAACCGAAATGGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCA CTGGGCACGGAGAGCAGCACAGGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGG CTTTTCGGCCCTGCTCCGGATCTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCC GAGCGGGGCCCTGATGGGCGTAGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAG GCCCAGGGTTTCTCAGGGCTCTTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTG GCCTTCTACACCCCCAAGCTGCGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGG CGCCCTGACTCTCTGCTGAGCGAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTG ACCCAGTTCCACTTCCTGCTGCTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTG GAGAAATTTGGGCCGCTGAAGCACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCAC GTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGAC TGCCTGGACACGGTCCTGGCCCGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAG AGCTACTTTGAGGAGATTGCCCTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTG AAGCCAGCCGAACGTACCCAGGCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCA GAGGCCCTGACTCTCTACCGAGAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGG GCCTCTATCCATGAGCTGCTCGCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTG GCTTACCACTGTCAGCACGAGGCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCC ATCCTCATCCGTCACATCCCCCGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTG GTGAACTACAGCCAGGGTGGTGAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAG CAGGCCATCCACAACTACCTGCTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCC CACCGGGTGCATTACGACCTCAAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTA GAGCTGTATGAGGAGGCCGTGGACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATG TACCGGAAGTTCACTACAGAGAGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAA CTCTCAAACACGGAGGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATG CTGGGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATC >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000357724_chr15_88423659_-_2541nt ATGGCGTCCATCCTGGATGAGTACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCG GGGTATGTGAATGCCCAGCTGGAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTT GTCGTCTCCAGCAATCAGCTGTGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTG GAGCTGGGACGTAAGGATGACGCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAG GTCCTCTACGTGAACCGAAATGGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCA CTGGGCACGGAGAGCAGCACAGGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGG CTTTTCGGCCCTGCTCCGGATCTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCC GAGCGGGGCCCTGATGGGCGTAGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAG GCCCAGGGTTTCTCAGGGCTCTTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTG GCCTTCTACACCCCCAAGCTGCGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGG CGCCCTGACTCTCTGCTGAGCGAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTG ACCCAGTTCCACTTCCTGCTGCTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTG GAGAAATTTGGGCCGCTGAAGCACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCAC GTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGAC TGCCTGGACACGGTCCTGGCCCGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAG AGCTACTTTGAGGAGATTGCCCTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTG AAGCCAGCCGAACGTACCCAGGCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCA GAGGCCCTGACTCTCTACCGAGAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGG GCCTCTATCCATGAGCTGCTCGCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTG GCTTACCACTGTCAGCACGAGGCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCC ATCCTCATCCGTCACATCCCCCGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTG GTGAACTACAGCCAGGGTGGTGAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAG CAGGCCATCCACAACTACCTGCTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCC CACCGGGTGCATTACGACCTCAAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTA GAGCTGTATGAGGAGGCCGTGGACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATG TACCGGAAGTTCACTACAGAGAGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAA CTCTCAAACACGGAGGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATG CTGGGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATC >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000355254_chr15_88423659_-_2541nt ATGGCGTCCATCCTGGATGAGTACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCG GGGTATGTGAATGCCCAGCTGGAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTT GTCGTCTCCAGCAATCAGCTGTGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTG GAGCTGGGACGTAAGGATGACGCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAG GTCCTCTACGTGAACCGAAATGGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCA CTGGGCACGGAGAGCAGCACAGGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGG CTTTTCGGCCCTGCTCCGGATCTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCC GAGCGGGGCCCTGATGGGCGTAGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAG GCCCAGGGTTTCTCAGGGCTCTTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTG GCCTTCTACACCCCCAAGCTGCGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGG CGCCCTGACTCTCTGCTGAGCGAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTG ACCCAGTTCCACTTCCTGCTGCTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTG GAGAAATTTGGGCCGCTGAAGCACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCAC GTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGAC TGCCTGGACACGGTCCTGGCCCGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAG AGCTACTTTGAGGAGATTGCCCTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTG AAGCCAGCCGAACGTACCCAGGCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCA GAGGCCCTGACTCTCTACCGAGAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGG GCCTCTATCCATGAGCTGCTCGCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTG GCTTACCACTGTCAGCACGAGGCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCC ATCCTCATCCGTCACATCCCCCGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTG GTGAACTACAGCCAGGGTGGTGAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAG CAGGCCATCCACAACTACCTGCTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCC CACCGGGTGCATTACGACCTCAAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTA GAGCTGTATGAGGAGGCCGTGGACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATG TACCGGAAGTTCACTACAGAGAGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAA CTCTCAAACACGGAGGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATG CTGGGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATC >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000360948_chr15_88423659_-_2541nt ATGGCGTCCATCCTGGATGAGTACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCG GGGTATGTGAATGCCCAGCTGGAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTT GTCGTCTCCAGCAATCAGCTGTGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTG GAGCTGGGACGTAAGGATGACGCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAG GTCCTCTACGTGAACCGAAATGGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCA CTGGGCACGGAGAGCAGCACAGGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGG CTTTTCGGCCCTGCTCCGGATCTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCC GAGCGGGGCCCTGATGGGCGTAGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAG GCCCAGGGTTTCTCAGGGCTCTTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTG GCCTTCTACACCCCCAAGCTGCGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGG CGCCCTGACTCTCTGCTGAGCGAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTG ACCCAGTTCCACTTCCTGCTGCTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTG GAGAAATTTGGGCCGCTGAAGCACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCAC GTGCAACGGGAGGCCCGAGATGTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGAC TGCCTGGACACGGTCCTGGCCCGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAG AGCTACTTTGAGGAGATTGCCCTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTG AAGCCAGCCGAACGTACCCAGGCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCA GAGGCCCTGACTCTCTACCGAGAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGG GCCTCTATCCATGAGCTGCTCGCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTG GCTTACCACTGTCAGCACGAGGCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCC ATCCTCATCCGTCACATCCCCCGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTG GTGAACTACAGCCAGGGTGGTGAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAG CAGGCCATCCACAACTACCTGCTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCC CACCGGGTGCATTACGACCTCAAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTA GAGCTGTATGAGGAGGCCGTGGACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATG TACCGGAAGTTCACTACAGAGAGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAA CTCTCAAACACGGAGGTCATTGAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATG CTGGGGTGCTGGCAGAGGGAACCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000394480_chr15_88423659_-_4816nt GCCCGCGTCACGGGGGCGGGAGTCAGCTGAGCTGCCGGGGCGAGGTTGGGATCACCTGGCACCGGCTGAAGGGAGCCTGTGATTTTTTTG TAGCGGGGGCGGGGAGTAAGGTGCAAGACTGCGCCAGATTCAAGGACGAGGGCTGCCCGATTATCTCGCTGCATAAGGCAAGAGCAAGAG GATCCTCAGGATTTTAAAGAGGAGGCGACGGCTGCAGGTTCCCAGGATCTGTCAGAGGCTGGGGAGTTACAGCTTCCATTCTGGGGCGAC GGGGACCCCGGGGGGGTAGCCCTTTTGTAATCCCCAGGCCCCGGACAAAGAGCCCAGAGGCCGGGCACCATGGCGTCCATCCTGGATGAG TACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCGGGGTATGTGAATGCCCAGCTG GAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTTGTCGTCTCCAGCAATCAGCTG TGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTGGAGCTGGGACGTAAGGATGAC GCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAGGTCCTCTACGTGAACCGAAAT GGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCACTGGGCACGGAGAGCAGCACA GGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGGCTTTTCGGCCCTGCTCCGGAT CTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCCGAGCGGGGCCCTGATGGGCGT AGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAGGCCCAGGGTTTCTCAGGGCTC TTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTGGCCTTCTACACCCCCAAGCTG CGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGGCGCCCTGACTCTCTGCTGAGC GAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTGACCCAGTTCCACTTCCTGCTG CTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTGGAGAAATTTGGGCCGCTGAAG CACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCACGTGCAACGGGAGGCCCGAGAT GTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGACTGCCTGGACACGGTCCTGGCC CGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAGAGCTACTTTGAGGAGATTGCC CTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTGAAGCCAGCCGAACGTACCCAG GCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGA GAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGGGCCTCTATCCATGAGCTGCTC GCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTGGCTTACCACTGTCAGCACGAG GCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCCATCCTCATCCGTCACATCCCC CGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTGGTGAACTACAGCCAGGGTGGT GAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAGCAGGCCATCCACAACTACCTG CTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCCCACCGGGTGCATTACGACCTC AAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTAGAGCTGTATGAGGAGGCCGTG GACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATGTACCGGAAGTTCACTACAGAG AGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGAGGTCATT GAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATGCTGGGGTGCTGGCAGAGGGAA CCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGGACATTCTTGGCTAG TGGTGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCCTCTCTCCCTGCCTCACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTG ACTGAAGCGAACATCTTCATATAAACTCAAGTGCCTGCTACACATACAACACTGAAAAAAGGAAAAAAAAAGAAAGAAAAAAAAACCCTG TAAGGCAGTTTGGCAAATATATATATATATATATATATTTATATATCTAACTATCTATCAATCTATATCTACAGAGAGTTACCTTCTCTA GTACACAGAGAAGCTGCTGATACAGAAAACCACAAGACTTTAACAACTCAGAAACTCTAAAATATTAATAATACAAAGGAAAATTCCCTT TGACTTAAGCTGTGGCCCATGCTTCTAATGCTACGGCTCTTTGGAGCAGAAGACCTGGACCATGCAGAGAGACAATCTTTGGGATGAGAG CTCTGGGACGGGAGGAGTTAAGGTGGTGCTCAGTCGCTGCTGTGTGTGTCTGTTACCCCGGAAGCTCACCACAGGCACATGTGGGGACTG CATGGCTGTGCTCAGCAAAGAAATGATGCCTGAGCAGGGTCCTTGCCTCCACTTCTTCCCCATTTCCTCCACTTCAGGACAATGTTCTAA TTTGTCCATTCTAAAAAGTGTAATCTTGATGCTTTTGGGAATCAATGATGGCACCTACGGGTAAACACAGAACAGACAACCCCACAACAC AAAACCATGACAAGAGCTGACAGCATCCATCCTGGGTGTAAGCTTCTTGCTGGAGTTGCAAAGGATGTGTCTTTCTATTCTCAGAACTTA AAGAACTGGACTTTCTGGAGTAAAAGAACCACAGAAGAAAAAATAGCTGAAACCTGAACCCTGCCAAGACACTGCCACCTGTCTTTTCCA TCATTGCAAAGATTCCTTGGCCTCACCTCCCACTTTCAGGCCCCTGGGAAGCTTAGGGGGTTAGGAAACAGGTCCCCATGTTATCTTTGA ATGTAGACACAGCACGCTTTAGGGTTGCAATAGCAAGAGACTTGGTTGCTTGTAGGTCATTATAACGAATGCCCCCTGGTCCTCTCAGTT TCTCATCCTGCTTCCCTAGATCCTAGACCCCACTTCCTGGGTCTCTACTGAGTCCCAGGTAAACCCCACTGCCAAGGAAGGGAGCCAGGT CTAGTGAGAGGCTGCAGCAGTGAGTGTTTCAGGAAAGCAAGCAGTGGAGTGGGTGAGAGCCAGCAGGGGAGAATCTACTTGGCACCTGTG CCAGGCCCCTTGGCATTCTCCTCACGTTTCCAGCCCCTGGGAGGATTGATGCATCTGCCTTTGAGCTGTTGTGAAAACGCAGGGGCTGAG AAATCACTTTTGTGGGCTGGGGTAGGGGGAAGGGCTGAGGCTTCTCTGGGAGATGTCCAATGAGCGGCCAGTGCTGCAGGCTTGGAATCT TAATGAGGCCTGAGCCCTGACCGGAGAGAGGGAAGGAAACATCTGTGCTGGGGCCTGCTCCCTCTGCCCCAGCACTGGGGAATCACTGCC TTCCTGGCTGCTGCCACATACCACAGTGGGGCCGACCTCTGGGCCTCCCTGTCACATGAAACATGGAAGCCAACAGCCTGGCCCCACAGA TCTCCTCTGCTGGAGAGGAGAGGATGTGTTCCTCCCAGGCCACGGGGCCCCTCTGCCTTGCCCCAAGCACAGAGCTACCTAAGGGACTGA CCTTTGCCACACTGGAGCTCACCTCCCGGGGGCCTCTGGCCTACCCTTTTCCCTGCCAGCTGAAGAGACTGCCGGCAGCCTGGACGTCCT GGTTAGCTGAAGGCAGCTGAAATGTGGGCCTCCCTATGTGGGGTTTAGTACTGAATTATGTGTTTGTGGTTTTGCTTCTTTTTGTAGACC >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000557856_chr15_88423659_-_3024nt GCCCGCGTCACGGGGGCGGGAGTCAGCTGAGCTGCCGGGGCGAGGTTGGGATCACCTGGCACCGGCTGAAGGGAGCCTGTGATTTTTTTG TAGCGGGGGCGGGGAGTAAGGTGCAAGACTGCGCCAGATTCAAGGACGAGGGCTGCCCGATTATCTCGCTGCATAAGGCAAGAGCAAGAG GATCCTCAGGATTTTAAAGAGGAGGCGACGGCTGCAGGTTCCCAGGATCTGTCAGAGGCTGGGGAGTTACAGCTTCCATTCTGGGGCGAC GGGGACCCCGGGGGGGTAGCCCTTTTGTAATCCCCAGGCCCCGGACAAAGAGCCCAGAGGCCGGGCACCATGGCGTCCATCCTGGATGAG TACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCGGGGTATGTGAATGCCCAGCTG GAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTTGTCGTCTCCAGCAATCAGCTG TGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTGGAGCTGGGACGTAAGGATGAC GCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAGGTCCTCTACGTGAACCGAAAT GGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCACTGGGCACGGAGAGCAGCACA GGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGGCTTTTCGGCCCTGCTCCGGAT CTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCCGAGCGGGGCCCTGATGGGCGT AGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAGGCCCAGGGTTTCTCAGGGCTC TTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTGGCCTTCTACACCCCCAAGCTG CGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGGCGCCCTGACTCTCTGCTGAGC GAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTGACCCAGTTCCACTTCCTGCTG CTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTGGAGAAATTTGGGCCGCTGAAG CACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCACGTGCAACGGGAGGCCCGAGAT GTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGACTGCCTGGACACGGTCCTGGCC CGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAGAGCTACTTTGAGGAGATTGCC CTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTGAAGCCAGCCGAACGTACCCAG GCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGA GAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGGGCCTCTATCCATGAGCTGCTC GCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTGGCTTACCACTGTCAGCACGAG GCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCCATCCTCATCCGTCACATCCCC CGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTGGTGAACTACAGCCAGGGTGGT GAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAGCAGGCCATCCACAACTACCTG CTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCCCACCGGGTGCATTACGACCTC AAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTAGAGCTGTATGAGGAGGCCGTG GACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATGTACCGGAAGTTCACTACAGAG AGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGAGGTCATT GAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATGCTGGGGTGCTGGCAGAGGGAA CCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGGACATTCTTGGCTAG TGGTGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCCTCTCTCCCTGCCTCACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTG >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000357724_chr15_88423659_-_3024nt GCCCGCGTCACGGGGGCGGGAGTCAGCTGAGCTGCCGGGGCGAGGTTGGGATCACCTGGCACCGGCTGAAGGGAGCCTGTGATTTTTTTG TAGCGGGGGCGGGGAGTAAGGTGCAAGACTGCGCCAGATTCAAGGACGAGGGCTGCCCGATTATCTCGCTGCATAAGGCAAGAGCAAGAG GATCCTCAGGATTTTAAAGAGGAGGCGACGGCTGCAGGTTCCCAGGATCTGTCAGAGGCTGGGGAGTTACAGCTTCCATTCTGGGGCGAC GGGGACCCCGGGGGGGTAGCCCTTTTGTAATCCCCAGGCCCCGGACAAAGAGCCCAGAGGCCGGGCACCATGGCGTCCATCCTGGATGAG TACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCGGGGTATGTGAATGCCCAGCTG GAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTTGTCGTCTCCAGCAATCAGCTG TGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTGGAGCTGGGACGTAAGGATGAC GCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAGGTCCTCTACGTGAACCGAAAT GGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCACTGGGCACGGAGAGCAGCACA GGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGGCTTTTCGGCCCTGCTCCGGAT CTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCCGAGCGGGGCCCTGATGGGCGT AGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAGGCCCAGGGTTTCTCAGGGCTC TTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTGGCCTTCTACACCCCCAAGCTG CGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGGCGCCCTGACTCTCTGCTGAGC GAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTGACCCAGTTCCACTTCCTGCTG CTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTGGAGAAATTTGGGCCGCTGAAG CACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCACGTGCAACGGGAGGCCCGAGAT GTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGACTGCCTGGACACGGTCCTGGCC CGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAGAGCTACTTTGAGGAGATTGCC CTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTGAAGCCAGCCGAACGTACCCAG GCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGA GAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGGGCCTCTATCCATGAGCTGCTC GCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTGGCTTACCACTGTCAGCACGAG GCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCCATCCTCATCCGTCACATCCCC CGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTGGTGAACTACAGCCAGGGTGGT GAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAGCAGGCCATCCACAACTACCTG CTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCCCACCGGGTGCATTACGACCTC AAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTAGAGCTGTATGAGGAGGCCGTG GACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATGTACCGGAAGTTCACTACAGAG AGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGAGGTCATT GAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATGCTGGGGTGCTGGCAGAGGGAA CCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGGACATTCTTGGCTAG TGGTGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCCTCTCTCCCTGCCTCACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTG >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000355254_chr15_88423659_-_3024nt GCCCGCGTCACGGGGGCGGGAGTCAGCTGAGCTGCCGGGGCGAGGTTGGGATCACCTGGCACCGGCTGAAGGGAGCCTGTGATTTTTTTG TAGCGGGGGCGGGGAGTAAGGTGCAAGACTGCGCCAGATTCAAGGACGAGGGCTGCCCGATTATCTCGCTGCATAAGGCAAGAGCAAGAG GATCCTCAGGATTTTAAAGAGGAGGCGACGGCTGCAGGTTCCCAGGATCTGTCAGAGGCTGGGGAGTTACAGCTTCCATTCTGGGGCGAC GGGGACCCCGGGGGGGTAGCCCTTTTGTAATCCCCAGGCCCCGGACAAAGAGCCCAGAGGCCGGGCACCATGGCGTCCATCCTGGATGAG TACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCGGGGTATGTGAATGCCCAGCTG GAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTTGTCGTCTCCAGCAATCAGCTG TGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTGGAGCTGGGACGTAAGGATGAC GCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAGGTCCTCTACGTGAACCGAAAT GGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCACTGGGCACGGAGAGCAGCACA GGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGGCTTTTCGGCCCTGCTCCGGAT CTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCCGAGCGGGGCCCTGATGGGCGT AGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAGGCCCAGGGTTTCTCAGGGCTC TTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTGGCCTTCTACACCCCCAAGCTG CGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGGCGCCCTGACTCTCTGCTGAGC GAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTGACCCAGTTCCACTTCCTGCTG CTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTGGAGAAATTTGGGCCGCTGAAG CACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCACGTGCAACGGGAGGCCCGAGAT GTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGACTGCCTGGACACGGTCCTGGCC CGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAGAGCTACTTTGAGGAGATTGCC CTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTGAAGCCAGCCGAACGTACCCAG GCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGA GAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGGGCCTCTATCCATGAGCTGCTC GCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTGGCTTACCACTGTCAGCACGAG GCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCCATCCTCATCCGTCACATCCCC CGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTGGTGAACTACAGCCAGGGTGGT GAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAGCAGGCCATCCACAACTACCTG CTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCCCACCGGGTGCATTACGACCTC AAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTAGAGCTGTATGAGGAGGCCGTG GACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATGTACCGGAAGTTCACTACAGAG AGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGAGGTCATT GAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATGCTGGGGTGCTGGCAGAGGGAA CCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGGACATTCTTGGCTAG TGGTGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCCTCTCTCCCTGCCTCACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTG >In-frame_VPS18_ENST00000220509_chr15_41193212_+_NTRK3_ENST00000360948_chr15_88423659_-_3024nt GCCCGCGTCACGGGGGCGGGAGTCAGCTGAGCTGCCGGGGCGAGGTTGGGATCACCTGGCACCGGCTGAAGGGAGCCTGTGATTTTTTTG TAGCGGGGGCGGGGAGTAAGGTGCAAGACTGCGCCAGATTCAAGGACGAGGGCTGCCCGATTATCTCGCTGCATAAGGCAAGAGCAAGAG GATCCTCAGGATTTTAAAGAGGAGGCGACGGCTGCAGGTTCCCAGGATCTGTCAGAGGCTGGGGAGTTACAGCTTCCATTCTGGGGCGAC GGGGACCCCGGGGGGGTAGCCCTTTTGTAATCCCCAGGCCCCGGACAAAGAGCCCAGAGGCCGGGCACCATGGCGTCCATCCTGGATGAG TACGAGAACTCGCTGTCCCGCTCGGCCGTCTTGCAGCCCGGCTGCCCTAGCGTGGGCATCCCCCACTCGGGGTATGTGAATGCCCAGCTG GAGAAGGAAGTGCCCATCTTCACAAAGCAGCGCATTGACTTCACCCCTTCCGAGCGCATTACCAGTCTTGTCGTCTCCAGCAATCAGCTG TGCATGAGCCTGGGCAAGGATACACTGCTCCGCATTGACTTGGGCAAGGCAAATGAGCCCAACCACGTGGAGCTGGGACGTAAGGATGAC GCAAAAGTTCACAAGATGTTCCTTGACCATACTGGCTCTCACCTGCTGATTGCCCTGAGCAGCACGGAGGTCCTCTACGTGAACCGAAAT GGACAGAAGGTACGGCCACTAGCACGCTGGAAGGGGCAGCTGGTGGAGAGTGTGGGTTGGAACAAGGCACTGGGCACGGAGAGCAGCACA GGCCCCATCCTGGTCGGGACTGCCCAAGGCCACATCTTTGAAGCAGAGCTCTCAGCCAGCGAAGGTGGGCTTTTCGGCCCTGCTCCGGAT CTCTACTTCCGCCCATTGTACGTGCTAAATGAAGAAGGGGGTCCAGCACCTGTGTGCTCCCTTGAGGCCGAGCGGGGCCCTGATGGGCGT AGCTTTGTTATTGCCACCACTCGGCAGCGCCTCTTCCAGTTCATAGGCCGAGCAGCAGAGGGGGCTGAGGCCCAGGGTTTCTCAGGGCTC TTTGCAGCTTACACGGACCACCCACCCCCATTCCGTGAGTTTCCCAGCAACCTGGGCTACAGTGAGTTGGCCTTCTACACCCCCAAGCTG CGCTCCGCACCCCGGGCCTTCGCCTGGATGATGGGGGATGGTGTGTTGTATGGGGCATTGGACTGTGGGCGCCCTGACTCTCTGCTGAGC GAGGAGCGAGTCTGGGAGTACCCAGAGGGGGTAGGGCCTGGGGCCAGCCCACCCCTAGCCATCGTCTTGACCCAGTTCCACTTCCTGCTG CTACTGGCAGACCGGGTGGAGGCAGTGTGCACACTGACCGGGCAGGTGGTGCTGCGGGATCACTTCCTGGAGAAATTTGGGCCGCTGAAG CACATGGTGAAGGACTCCTCCACAGGCCAGCTGTGGGCCTACACTGAGCGGGCTGTCTTCCGCTACCACGTGCAACGGGAGGCCCGAGAT GTCTGGCGCACCTATCTGGACATGAACCGCTTCGATCTGGCCAAAGAGTATTGTCGAGAGCGGCCCGACTGCCTGGACACGGTCCTGGCC CGGGAGGCCGATTTCTGCTTTCGCCAGCGTCGCTACCTGGAGAGCGCACGCTGCTATGCCCTGACCCAGAGCTACTTTGAGGAGATTGCC CTCAAGTTCCTGGAGGCCCGACAGGAGGAGGCTCTGGCTGAGTTCCTGCAGCGAAAACTGGCCAGTTTGAAGCCAGCCGAACGTACCCAG GCCACACTGCTGACCACCTGGCTGACAGAGCTCTACCTGAGCCGGCTTGGGGCTCTGCAGGGCGACCCAGAGGCCCTGACTCTCTACCGA GAAACCAAGGAATGCTTTCGAACCTTCCTCAGCAGCCCCCGCCACAAAGAGTGGCTCTTTGCCAGCCGGGCCTCTATCCATGAGCTGCTC GCCAGTCATGGGGACACAGAACACATGGTGTACTTTGCAGTGATCATGCAGGACTATGAGCGGGTGGTGGCTTACCACTGTCAGCACGAG GCCTACGAGGAGGCCCTGGCCGTGCTCGCCCGCCACCGTGACCCCCAGCTCTTCTACAAGTTCTCACCCATCCTCATCCGTCACATCCCC CGCCAGCTTGTAGATGCCTGGATTGAGATGGGCAGCCGGCTGGATGCTCGTCAGCTCATTCCTGCCCTGGTGAACTACAGCCAGGGTGGT GAGGTCCAGCAGGTGAGCCAGGCCATCCGCTACATGGAGTTCTGCGTGAACGTGCTGGGGGAGACTGAGCAGGCCATCCACAACTACCTG CTGTCACTGTATGCCCGTGGCCGGCCGGACTCACTACTGGCCTATCTGGAGCAGGCTGGGGCCAGCCCCCACCGGGTGCATTACGACCTC AAGTATGCGCTGCGGCTCTGCGCCGAGCATGGCCACCACCGCGCTTGTGTCCATGTCTACAAGGTCCTAGAGCTGTATGAGGAGGCCGTG GACCTGGCCCTGCAGGTGGGAGGACACACCATGCTCCCCATTCGCTGGATGCCTCCTGAAAGCATCATGTACCGGAAGTTCACTACAGAG AGTGATGTATGGAGCTTCGGGGTGATCCTCTGGGAGATCTTCACCTATGGAAAGCAGCCATGGTTCCAACTCTCAAACACGGAGGTCATT GAGTGCATTACCCAAGGTCGTGTTTTGGAGCGGCCCCGAGTCTGCCCCAAAGAGGTGTACGATGTCATGCTGGGGTGCTGGCAGAGGGAA CCACAGCAGCGGTTGAACATCAAGGAGATCTACAAAATCCTCCATGCTTTGGGGAAGGCCACCCCAATCTACCTGGACATTCTTGGCTAG TGGTGGCTGGTGGTCATGAATTCATACTCTGTTGCCTCCTCTCTCCCTGCCTCACATCTCCCTTCCACCTCACAACTCCTTCCATCCTTG |
Top |
FusionGenePPI for VPS18_NTRK3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| VPS18 | CCNA1, VPS11, VPS16, VPS33A, STX7, GGA1, GGA2, GGA3, UVRAG, HOOK1, AKTIP, UBE2D2, VPS41, UTP20, POLR3A, HSP90AA1, MON1B, SYNPO2, EP300, COPB1, CT55, LDLRAD4, RILP, RAB7A, NTRK1, MED23, ALDOA, BIN1, NDUFV3, PRSS1, UPP1, VCP, MTA1, TGFBRAP1, SRRM1, VPS8, DNAJB5, RSRC1, SCLY, ZGRF1, SERINC1, ELMO3, TSEN2, OBSCN, TJAP1, MIA3, STX17, TECPR2, UXS1, VIPR2, LYPD4 | NTRK3 | NTF3, FRS2, SHC1, PLCG1, SQSTM1, PTPN1, APP, HSP90AA1, IRAK3, TNK2, NTRK1, SH3BP4, PTPRS, MYADM, C1GALT1, GNB2, C6orf120, MTOR, LGALS1, PTCD2, TMEM11, PAG1, EFR3A, TBC1D24, GNB4, TMEM192, INTS7, DENND4A, FAM171A2, KIAA0391, EPHA2, ATP7B, CXCR4, ACAD10, HRAS, EHD4, RPTOR, HEATR6, SLC39A11 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for VPS18_NTRK3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for VPS18_NTRK3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | NTRK3 | C0036341 | Schizophrenia | 3 | PSYGENET |
| Tgene | NTRK3 | C0041696 | Unipolar Depression | 2 | PSYGENET |
| Tgene | NTRK3 | C1269683 | Major Depressive Disorder | 2 | PSYGENET |
| Tgene | NTRK3 | C0014175 | Endometriosis | 1 | CTD_human |
| Tgene | NTRK3 | C0017638 | Glioma | 1 | CTD_human |
| Tgene | NTRK3 | C0038220 | Status Epilepticus | 1 | CTD_human |
| Tgene | NTRK3 | C0525045 | Mood Disorders | 1 | PSYGENET |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|