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Fusion gene ID: 41397 |
FusionGeneSummary for VCL_FGFR2 |
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Fusion gene information | Fusion gene name: VCL_FGFR2 | Fusion gene ID: 41397 | Hgene | Tgene | Gene symbol | VCL | FGFR2 | Gene ID | 7414 | 2263 |
Gene name | vinculin | fibroblast growth factor receptor 2 | |
Synonyms | CMD1W|CMH15|HEL114|MV|MVCL | BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 | |
Cytomap | 10q22.2 | 10q26.13 | |
Type of gene | protein-coding | protein-coding | |
Description | vinculinepididymis luminal protein 114meta-vinculinmetavinculin | fibroblast growth factor receptor 2BEK fibroblast growth factor receptorbacteria-expressed kinasekeratinocyte growth factor receptorprotein tyrosine kinase, receptor like 14 | |
Modification date | 20180522 | 20180527 | |
UniProtAcc | P18206 | P21802 | |
Ensembl transtripts involved in fusion gene | ENST00000211998, ENST00000372755, ENST00000478896, ENST00000417648, | ENST00000369061, ENST00000357555, ENST00000358487, ENST00000356226, ENST00000369060, ENST00000369059, ENST00000346997, ENST00000457416, ENST00000351936, ENST00000360144, ENST00000369056, ENST00000490349, ENST00000359354, ENST00000478859, | |
Fusion gene scores | * DoF score | 10 X 7 X 10=700 | 7 X 6 X 7=294 |
# samples | 12 | 11 | |
** MAII score | log2(12/700*10)=-2.54432051622381 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(11/294*10)=-1.4183126313117 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: VCL [Title/Abstract] AND FGFR2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. Kinase involved fusion gene, inframe and retained kinase domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | FGFR2 | GO:0008284 | positive regulation of cell proliferation | 8663044 |
Tgene | FGFR2 | GO:0008543 | fibroblast growth factor receptor signaling pathway | 8663044|15629145 |
Tgene | FGFR2 | GO:0018108 | peptidyl-tyrosine phosphorylation | 15629145|16844695 |
Tgene | FGFR2 | GO:0046777 | protein autophosphorylation | 15629145 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | THCA | TCGA-EM-A3FP-01A | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000211998 | ENST00000369061 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000357555 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000358487 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000356226 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000369060 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000369059 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000346997 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000457416 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000351936 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000360144 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000369056 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000490349 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000359354 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000211998 | ENST00000478859 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
In-frame | ENST00000372755 | ENST00000369061 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000357555 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000358487 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000356226 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000369060 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000369059 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000346997 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000457416 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000351936 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000360144 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000369056 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000490349 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000359354 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000372755 | ENST00000478859 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-3CDS | ENST00000478896 | ENST00000369061 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000357555 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000358487 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000356226 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000369060 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000369059 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000346997 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000457416 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000351936 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000360144 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000369056 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000490349 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000359354 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
3UTR-intron | ENST00000478896 | ENST00000478859 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
In-frame | ENST00000417648 | ENST00000369061 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000357555 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000358487 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000356226 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000369060 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000369059 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000346997 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000457416 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000351936 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000360144 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000369056 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000490349 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000359354 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
5CDS-intron | ENST00000417648 | ENST00000478859 | VCL | chr10 | 75758133 | + | FGFR2 | chr10 | 123239535 | - |
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FusionProtFeatures for VCL_FGFR2 |
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Hgene | Tgene |
VCL | FGFR2 |
Actin filament (F-actin)-binding protein involved incell-matrix adhesion and cell-cell adhesion. Regulates cell-surface E-cadherin expression and potentiates mechanosensing bythe E-cadherin complex. May also play important roles in cellmorphology and locomotion. {ECO:0000269|PubMed:20484056}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 154_247 | -216 | 786 | Domain | Note=Ig-like C2-type 2 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 256_358 | -216 | 786 | Domain | Note=Ig-like C2-type 3 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 25_125 | -216 | 786 | Domain | Note=Ig-like C2-type 1 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 481_770 | -216 | 786 | Domain | Protein kinase |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 154_247 | -107 | 708 | Domain | Note=Ig-like C2-type 2 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 256_358 | -107 | 708 | Domain | Note=Ig-like C2-type 3 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 25_125 | -107 | 708 | Domain | Note=Ig-like C2-type 1 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 481_770 | -107 | 708 | Domain | Protein kinase |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 154_247 | -163 | 255 | Domain | Note=Ig-like C2-type 2 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 256_358 | -163 | 255 | Domain | Note=Ig-like C2-type 3 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 25_125 | -163 | 255 | Domain | Note=Ig-like C2-type 1 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 481_770 | -163 | 255 | Domain | Protein kinase |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 154_247 | -207 | 681 | Domain | Note=Ig-like C2-type 2 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 256_358 | -207 | 681 | Domain | Note=Ig-like C2-type 3 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 25_125 | -207 | 681 | Domain | Note=Ig-like C2-type 1 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 481_770 | -207 | 681 | Domain | Protein kinase |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 154_247 | -8 | 770 | Domain | Note=Ig-like C2-type 2 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 256_358 | -8 | 770 | Domain | Note=Ig-like C2-type 3 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 25_125 | -8 | 770 | Domain | Note=Ig-like C2-type 1 |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 481_770 | -8 | 770 | Domain | Protein kinase |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 487_495 | -216 | 786 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 565_567 | -216 | 786 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 487_495 | -107 | 708 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 565_567 | -107 | 708 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 487_495 | -163 | 255 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 565_567 | -163 | 255 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 487_495 | -207 | 681 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 565_567 | -207 | 681 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 487_495 | -8 | 770 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 565_567 | -8 | 770 | Nucleotide binding | ATP |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 161_178 | -216 | 786 | Region | Note=Heparin-binding |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 161_178 | -107 | 708 | Region | Note=Heparin-binding |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 161_178 | -163 | 255 | Region | Note=Heparin-binding |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 161_178 | -207 | 681 | Region | Note=Heparin-binding |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 161_178 | -8 | 770 | Region | Note=Heparin-binding |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 22_377 | -216 | 786 | Topological domain | Extracellular |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 399_821 | -216 | 786 | Topological domain | Cytoplasmic |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 22_377 | -107 | 708 | Topological domain | Extracellular |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 399_821 | -107 | 708 | Topological domain | Cytoplasmic |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 22_377 | -163 | 255 | Topological domain | Extracellular |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 399_821 | -163 | 255 | Topological domain | Cytoplasmic |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 22_377 | -207 | 681 | Topological domain | Extracellular |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 399_821 | -207 | 681 | Topological domain | Cytoplasmic |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 22_377 | -8 | 770 | Topological domain | Extracellular |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 399_821 | -8 | 770 | Topological domain | Cytoplasmic |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000351936 | - | 0 | 18 | 378_398 | -216 | 786 | Transmembrane | Helical |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000357555 | - | 0 | 17 | 378_398 | -107 | 708 | Transmembrane | Helical |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000359354 | - | 0 | 7 | 378_398 | -163 | 255 | Transmembrane | Helical |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000360144 | - | 0 | 17 | 378_398 | -207 | 681 | Transmembrane | Helical |
Tgene | >FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369056 | - | 0 | 17 | 378_398 | -8 | 770 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 837_878 | 56 | 1135 | Compositional bias | Pro-rich |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 837_878 | 56 | 1067 | Compositional bias | Pro-rich |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 1003_1046 | 56 | 1135 | Region | Facilitates phospholipid membrane insertion |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 1120_1134 | 56 | 1135 | Region | Facilitates phospholipid membrane insertion |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 1_835 | 56 | 1135 | Region | N-terminal globular head |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 259_589 | 56 | 1135 | Region | 3 X 112 AA tandem repeats |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 836_878 | 56 | 1135 | Region | Linker (Pro-rich) |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 879_1134 | 56 | 1135 | Region | C-terminal tail |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 1003_1046 | 56 | 1067 | Region | Facilitates phospholipid membrane insertion |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 1120_1134 | 56 | 1067 | Region | Facilitates phospholipid membrane insertion |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 1_835 | 56 | 1067 | Region | N-terminal globular head |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 259_589 | 56 | 1067 | Region | 3 X 112 AA tandem repeats |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 836_878 | 56 | 1067 | Region | Linker (Pro-rich) |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 879_1134 | 56 | 1067 | Region | C-terminal tail |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 259_369 | 56 | 1135 | Repeat | 1 |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 370_479 | 56 | 1135 | Repeat | 2 |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 480_589 | 56 | 1135 | Repeat | 3 |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 259_369 | 56 | 1067 | Repeat | 1 |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 370_479 | 56 | 1067 | Repeat | 2 |
Hgene | >VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 480_589 | 56 | 1067 | Repeat | 3 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 154_247 | 765 | 820 | Domain | Note=Ig-like C2-type 2 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 256_358 | 765 | 820 | Domain | Note=Ig-like C2-type 3 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 25_125 | 765 | 820 | Domain | Note=Ig-like C2-type 1 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 481_770 | 765 | 820 | Domain | Protein kinase |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 154_247 | 650 | 705 | Domain | Note=Ig-like C2-type 2 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 256_358 | 650 | 705 | Domain | Note=Ig-like C2-type 3 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 25_125 | 650 | 705 | Domain | Note=Ig-like C2-type 1 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 481_770 | 650 | 705 | Domain | Protein kinase |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 154_247 | 767 | 822 | Domain | Note=Ig-like C2-type 2 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 256_358 | 767 | 822 | Domain | Note=Ig-like C2-type 3 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 25_125 | 767 | 822 | Domain | Note=Ig-like C2-type 1 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 481_770 | 767 | 822 | Domain | Protein kinase |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 154_247 | 651 | 706 | Domain | Note=Ig-like C2-type 2 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 256_358 | 651 | 706 | Domain | Note=Ig-like C2-type 3 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 25_125 | 651 | 706 | Domain | Note=Ig-like C2-type 1 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 481_770 | 651 | 706 | Domain | Protein kinase |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 154_247 | 655 | 710 | Domain | Note=Ig-like C2-type 2 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 256_358 | 655 | 710 | Domain | Note=Ig-like C2-type 3 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 25_125 | 655 | 710 | Domain | Note=Ig-like C2-type 1 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 481_770 | 655 | 710 | Domain | Protein kinase |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 154_247 | 768 | 823 | Domain | Note=Ig-like C2-type 2 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 256_358 | 768 | 823 | Domain | Note=Ig-like C2-type 3 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 25_125 | 768 | 823 | Domain | Note=Ig-like C2-type 1 |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 481_770 | 768 | 823 | Domain | Protein kinase |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 487_495 | 765 | 820 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 565_567 | 765 | 820 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 487_495 | 650 | 705 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 565_567 | 650 | 705 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 487_495 | 767 | 822 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 565_567 | 767 | 822 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 487_495 | 651 | 706 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 565_567 | 651 | 706 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 487_495 | 655 | 710 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 565_567 | 655 | 710 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 487_495 | 768 | 823 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 565_567 | 768 | 823 | Nucleotide binding | ATP |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 161_178 | 765 | 820 | Region | Note=Heparin-binding |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 161_178 | 650 | 705 | Region | Note=Heparin-binding |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 161_178 | 767 | 822 | Region | Note=Heparin-binding |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 161_178 | 651 | 706 | Region | Note=Heparin-binding |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 161_178 | 655 | 710 | Region | Note=Heparin-binding |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 161_178 | 768 | 823 | Region | Note=Heparin-binding |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 22_377 | 765 | 820 | Topological domain | Extracellular |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 399_821 | 765 | 820 | Topological domain | Cytoplasmic |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 22_377 | 650 | 705 | Topological domain | Extracellular |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 399_821 | 650 | 705 | Topological domain | Cytoplasmic |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 22_377 | 767 | 822 | Topological domain | Extracellular |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 399_821 | 767 | 822 | Topological domain | Cytoplasmic |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 22_377 | 651 | 706 | Topological domain | Extracellular |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 399_821 | 651 | 706 | Topological domain | Cytoplasmic |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 22_377 | 655 | 710 | Topological domain | Extracellular |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 399_821 | 655 | 710 | Topological domain | Cytoplasmic |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 22_377 | 768 | 823 | Topological domain | Extracellular |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 399_821 | 768 | 823 | Topological domain | Cytoplasmic |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000346997 | - | 15 | 17 | 378_398 | 765 | 820 | Transmembrane | Helical |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000356226 | - | 14 | 16 | 378_398 | 650 | 705 | Transmembrane | Helical |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000358487 | - | 16 | 18 | 378_398 | 767 | 822 | Transmembrane | Helical |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369060 | - | 14 | 16 | 378_398 | 651 | 706 | Transmembrane | Helical |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000369061 | - | 13 | 15 | 378_398 | 655 | 710 | Transmembrane | Helical |
Tgene | FGFR2 | chr10:75758133 | chr10:123239535 | ENST00000457416 | - | 16 | 18 | 378_398 | 768 | 823 | Transmembrane | Helical |
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FusionGeneSequence for VCL_FGFR2 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_VCL_ENST00000211998_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_111aa MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVREYLDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPD >In-frame_VCL_ENST00000372755_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_111aa MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVREYLDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPD >In-frame_VCL_ENST00000417648_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_111aa MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVREYLDLSQPLEQYSPSYPDTRSSCSSGDDSVFSPD |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_VCL_ENST00000211998_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_333nt ATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGC GAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGAATACTTGGAC CTCAGCCAACCTCTCGAACAGTATTCACCTAGTTACCCTGACACAAGAAGTTCTTGTTCTTCAGGAGATGATTCTGTTTTTTCTCCAGAC >In-frame_VCL_ENST00000372755_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_333nt ATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGC GAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGAATACTTGGAC CTCAGCCAACCTCTCGAACAGTATTCACCTAGTTACCCTGACACAAGAAGTTCTTGTTCTTCAGGAGATGATTCTGTTTTTTCTCCAGAC >In-frame_VCL_ENST00000417648_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_333nt ATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGGGC GAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGAATACTTGGAC CTCAGCCAACCTCTCGAACAGTATTCACCTAGTTACCCTGACACAAGAAGTTCTTGTTCTTCAGGAGATGATTCTGTTTTTTCTCCAGAC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_VCL_ENST00000211998_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_1950nt GTAGTCGCTGCACAGTCTGTCTCTTCGCCGGTTCCCGGCCCCGTGGATCCTACTTCTCTGTCGCCCGCGGTTCGCCGCCCCGCTCGCCGC CGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGA GGGCGAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGAATACTT GGACCTCAGCCAACCTCTCGAACAGTATTCACCTAGTTACCCTGACACAAGAAGTTCTTGTTCTTCAGGAGATGATTCTGTTTTTTCTCC AGACCCCATGCCTTACGAACCATGCCTTCCTCAGTATCCACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCA AACAGGACAGCACTGGGAACCTAGCTACACTGAGCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAG GAGTAAATAATTGGAAAAGTAATCAGCATATGTGTAAAGATTTATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTC TGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTG CGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTTATGTCAGCACACACTTACAGAGCACAAATGCAGTATATAGGTGCTG GATGTATGTAAATATATTCAAATTATGTATAAATATATATTATATATTTACAAGGAGTTATTTTTTGTATTGATTTTAAATGGATGTCCC AATGCACCTAGAAAATTGGTCTCTCTTTTTTTAATAGCTATTTGCTAAATGCTGTTCTTACACATAATTTCTTAATTTTCACCGAGCAGA GGTGGAAAAATACTTTTGCTTTCAGGGAAAATGGTATAACGTTAATTTATTAATAAATTGGTAATATACAAAACAATTAATCATTTATAG TTTTTTTTGTAATTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAATCTATTGCTTGGACTTAACTAGTTATCAGATCCTT TGAAAAGAGAATATTTACAATATATGACTAATTTGGGGAAAATGAAGTTTTGATTTATTTGTGTTTAAATGCTGCTGTCAGACGATTGTT CTTAGACCTCCTAAATGCCCCATATTAAAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCA ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAA TGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTGAGTTGCACATTAATCAGATTAGCCTGTATTCTCTTCAGTGAATT TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGAAAATTGAAACACAGAGTTGTTCT GCTGATAGTTTTGGGGATACGTCCATCTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACC TACATCAGACAAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGC AAGATGAATGCAGATTACACTGATCTTATGTGTTACAAAATTGGAGAAAGTATTTAATAAAACCTGTTAATTTTTATACTGACAATAAAA >In-frame_VCL_ENST00000372755_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_1950nt GTAGTCGCTGCACAGTCTGTCTCTTCGCCGGTTCCCGGCCCCGTGGATCCTACTTCTCTGTCGCCCGCGGTTCGCCGCCCCGCTCGCCGC CGCGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGA GGGCGAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGAATACTT GGACCTCAGCCAACCTCTCGAACAGTATTCACCTAGTTACCCTGACACAAGAAGTTCTTGTTCTTCAGGAGATGATTCTGTTTTTTCTCC AGACCCCATGCCTTACGAACCATGCCTTCCTCAGTATCCACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCA AACAGGACAGCACTGGGAACCTAGCTACACTGAGCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAG GAGTAAATAATTGGAAAAGTAATCAGCATATGTGTAAAGATTTATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTC TGGAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTG CGTTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTTATGTCAGCACACACTTACAGAGCACAAATGCAGTATATAGGTGCTG GATGTATGTAAATATATTCAAATTATGTATAAATATATATTATATATTTACAAGGAGTTATTTTTTGTATTGATTTTAAATGGATGTCCC AATGCACCTAGAAAATTGGTCTCTCTTTTTTTAATAGCTATTTGCTAAATGCTGTTCTTACACATAATTTCTTAATTTTCACCGAGCAGA GGTGGAAAAATACTTTTGCTTTCAGGGAAAATGGTATAACGTTAATTTATTAATAAATTGGTAATATACAAAACAATTAATCATTTATAG TTTTTTTTGTAATTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAATCTATTGCTTGGACTTAACTAGTTATCAGATCCTT TGAAAAGAGAATATTTACAATATATGACTAATTTGGGGAAAATGAAGTTTTGATTTATTTGTGTTTAAATGCTGCTGTCAGACGATTGTT CTTAGACCTCCTAAATGCCCCATATTAAAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCA ACGTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAA TGATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTGAGTTGCACATTAATCAGATTAGCCTGTATTCTCTTCAGTGAATT TTGATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGAAAATTGAAACACAGAGTTGTTCT GCTGATAGTTTTGGGGATACGTCCATCTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACC TACATCAGACAAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGC AAGATGAATGCAGATTACACTGATCTTATGTGTTACAAAATTGGAGAAAGTATTTAATAAAACCTGTTAATTTTTATACTGACAATAAAA >In-frame_VCL_ENST00000417648_chr10_75758133_+_FGFR2_ENST00000369061_chr10_123239535_-_1948nt AGTCGCTGCACAGTCTGTCTCTTCGCCGGTTCCCGGCCCCGTGGATCCTACTTCTCTGTCGCCCGCGGTTCGCCGCCCCGCTCGCCGCCG CGATGCCAGTGTTTCATACGCGCACGATCGAGAGCATCCTGGAGCCGGTGGCACAGCAGATCTCCCACCTGGTGATAATGCACGAGGAGG GCGAGGTGGACGGCAAAGCCATTCCTGACCTCACCGCGCCCGTGGCCGCCGTGCAGGCGGCCGTCAGCAACCTCGTCCGGGAATACTTGG ACCTCAGCCAACCTCTCGAACAGTATTCACCTAGTTACCCTGACACAAGAAGTTCTTGTTCTTCAGGAGATGATTCTGTTTTTTCTCCAG ACCCCATGCCTTACGAACCATGCCTTCCTCAGTATCCACACATAAACGGCAGTGTTAAAACATGAATGACTGTGTCTGCCTGTCCCCAAA CAGGACAGCACTGGGAACCTAGCTACACTGAGCAGGGAGACCATGCCTCCCAGAGCTTGTTGTCTCCACTTGTATATATGGATCAGAGGA GTAAATAATTGGAAAAGTAATCAGCATATGTGTAAAGATTTATACAGTTGAAAACTTGTAATCTTCCCCAGGAGGAGAAGAAGGTTTCTG GAGCAGTGGACTGCCACAAGCCACCATGTAACCCCTCTCACCTGCCGTGCGTACTGGCTGTGGACCAGTAGGACTCAAGGTGGACGTGCG TTCTGCCTTCCTTGTTAATTTTGTAATAATTGGAGAAGATTTATGTCAGCACACACTTACAGAGCACAAATGCAGTATATAGGTGCTGGA TGTATGTAAATATATTCAAATTATGTATAAATATATATTATATATTTACAAGGAGTTATTTTTTGTATTGATTTTAAATGGATGTCCCAA TGCACCTAGAAAATTGGTCTCTCTTTTTTTAATAGCTATTTGCTAAATGCTGTTCTTACACATAATTTCTTAATTTTCACCGAGCAGAGG TGGAAAAATACTTTTGCTTTCAGGGAAAATGGTATAACGTTAATTTATTAATAAATTGGTAATATACAAAACAATTAATCATTTATAGTT TTTTTTGTAATTTAAGTGGCATTTCTATGCAGGCAGCACAGCAGACTAGTTAATCTATTGCTTGGACTTAACTAGTTATCAGATCCTTTG AAAAGAGAATATTTACAATATATGACTAATTTGGGGAAAATGAAGTTTTGATTTATTTGTGTTTAAATGCTGCTGTCAGACGATTGTTCT TAGACCTCCTAAATGCCCCATATTAAAAGAACTCATTCATAGGAAGGTGTTTCATTTTGGTGTGCAACCCTGTCATTACGTCAACGCAAC GTCTAACTGGACTTCCCAAGATAAATGGTACCAGCGTCCTCTTAAAAGATGCCTTAATCCATTCCTTGAGGACAGACCTTAGTTGAAATG ATAGCAGAATGTGCTTCTCTCTGGCAGCTGGCCTTCTGCTTCTGAGTTGCACATTAATCAGATTAGCCTGTATTCTCTTCAGTGAATTTT GATAATGGCTTCCAGACTCTTTGGCGTTGGAGACGCCTGTTAGGATCTTCAAGTCCCATCATAGAAAATTGAAACACAGAGTTGTTCTGC TGATAGTTTTGGGGATACGTCCATCTTTTTAAGGGATTGCTTTCATCTAATTCTGGCAGGACCTCACCAAAAGATCCAGCCTCATACCTA CATCAGACAAAATATCGCCGTTGTTCCTTCTGTACTAAAGTATTGTGTTTTGCTTTGGAAACACCCACTCACTTTGCAATAGCCGTGCAA GATGAATGCAGATTACACTGATCTTATGTGTTACAAAATTGGAGAAAGTATTTAATAAAACCTGTTAATTTTTATACTGACAATAAAAAT |
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FusionGenePPI for VCL_FGFR2 |
![]() |
![]() |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
VCL | ABI2, C19orf57, TRIP6, CDH1, CTNNB1, PSME1, CORO2B, TGFB1I1, NRAP, PXN, GSN, BCAR1, VASP, SORBS1, SORBS2, CTNNA1, CLTC, DAG1, TUBA1A, SIRT7, CDK2, ITGB1, DNAJC5, TXNL1, SCAF4, URM1, ZC3HAV1L, SVIL, SSU72, SDHAF2, UBR1, VAPB, PGM5, USO1, ATP6V1A, UBA3, TPI1, UFC1, VCP, VCAM1, FN1, PRPF40A, ITGA4, ASNS, CTPS1, ECHS1, EIF5, FERMT2, GINS3, GSS, HSPA5, HSPA9, MSN, PDCD10, PDHA1, PDIA4, PPP1R2, PPP5C, RAP1GDS1, SFN, SNRPF, STK24, TUBB3, UBFD1, DCPS, ERP44, G6PD, GNAI3, ISOC1, PFAS, TBCB, XPO1, YWHAE, YWHAG, YWHAQ, YWHAZ, YWHAH, ASB7, VCL, TEKT1, UNK, PICALM, NTRK1, SELE, EWSR1, FBF1, LPXN, ACTG1, CAPZB, MYO1C, RPS27A, SPTAN1, TLN1, MKNK2, SEC16A, CDCA5, MPDZ, AP3M1, LIMA1, PPHLN1, RBM26, GKAP1, ASCC2, TRIM15, PAK4, FOCAD, TTC21B, UBE2N, HSD17B10, TRIM25, BRCA1 | FGFR2 | FGF1, FGFR2, FGF7, FGF10, PIK3R1, ITGA5, STAT3, PGR, STAT5A, STAT5B, NEDD4, FRS2, CBL, LYN, FYN, HGS, APP, PPM1A, TSPAN3, C8orf74, BEX1, BEX2, ERRFI1, GLCE, HOXC6, MTA3, PDLIM2, RASL10B, RHOBTB2, S100A14, TFF1, FGF5, FGF23, FGF8, PLCG1, FGF2, FGF3, FGF6, FGF9, FGF17, PVRL1, BRAF, MAP3K1, PTPN6, PTPN11, PTPN12, PTPRR, FGFR3, FGFR1, SNX24, GAPVD1, SNX22, UBE4A, IP6K1, RPS6KA3, IFFO2, TMEM30B, DNAJC30, XPR1, GOLGA3, KIDINS220, BCL11A, CEP295, CD44, RPS6KA2, LRRIQ1, RPS6KA1, LITAF, MRAP2, SDC2, FCGRT, SIGLECL1, RAET1E, FAM171B, CHERP, U2SURP, SLC9A6, TIMP1, CCDC120, CD83, PKP4, UBXN4, CTDSP1, CTDSPL, DUSP14, MTMR3 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | VCL | chr10:75758133 | chr10:123239535 | ENST00000211998 | + | 1 | 22 | 741_764 | 56 | 1135 | ACTN4 |
Hgene | VCL | chr10:75758133 | chr10:123239535 | ENST00000372755 | + | 1 | 21 | 741_764 | 56 | 1067 | ACTN4 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for VCL_FGFR2 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | FGFR2 | P21802 | DB00039 | Palifermin | Fibroblast growth factor receptor 2 | biotech | approved |
Tgene | FGFR2 | P21802 | DB08896 | Regorafenib | Fibroblast growth factor receptor 2 | small molecule | approved |
Tgene | FGFR2 | P21802 | DB09079 | Nintedanib | Fibroblast growth factor receptor 2 | small molecule | approved |
Tgene | FGFR2 | P21802 | DB01109 | Heparin | Fibroblast growth factor receptor 2 | small molecule | approved|investigational |
Tgene | FGFR2 | P21802 | DB08901 | Ponatinib | Fibroblast growth factor receptor 2 | small molecule | approved|investigational |
Tgene | FGFR2 | P21802 | DB09078 | Lenvatinib | Fibroblast growth factor receptor 2 | small molecule | approved|investigational |
Tgene | FGFR2 | P21802 | DB01041 | Thalidomide | Fibroblast growth factor receptor 2 | small molecule | approved|investigational|withdrawn |
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RelatedDiseases for VCL_FGFR2 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | VCL | C1969639 | Cardiomyopathy, Dilated, 1w | 2 | CTD_human;UNIPROT |
Hgene | VCL | C0029456 | Osteoporosis | 1 | CTD_human |
Hgene | VCL | C0948089 | Acute Coronary Syndrome | 1 | CTD_human |
Hgene | VCL | C2750459 | CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 15 | 1 | CTD_human;UNIPROT |
Tgene | FGFR2 | C2931196 | Craniofacial dysostosis type 1 | 21 | ORPHANET;UNIPROT |
Tgene | FGFR2 | C0220658 | Pfeiffer Syndrome | 10 | UNIPROT |
Tgene | FGFR2 | C0001193 | Apert syndrome | 8 | ORPHANET;UNIPROT |
Tgene | FGFR2 | C1510455 | Acrocephalosyndactylia | 4 | CTD_human |
Tgene | FGFR2 | C0010278 | Craniosynostosis | 3 | CTD_human;HPO |
Tgene | FGFR2 | C0036341 | Schizophrenia | 3 | PSYGENET |
Tgene | FGFR2 | C0376634 | Craniofacial Abnormalities | 3 | CTD_human |
Tgene | FGFR2 | C1458155 | Mammary Neoplasms | 3 | CTD_human |
Tgene | FGFR2 | C0011570 | Mental Depression | 2 | PSYGENET |
Tgene | FGFR2 | C0011581 | Depressive disorder | 2 | PSYGENET |
Tgene | FGFR2 | C0038356 | Stomach Neoplasms | 2 | CTD_human |
Tgene | FGFR2 | C1865070 | SCAPHOCEPHALY, MAXILLARY RETRUSION, AND MENTAL RETARDATION | 2 | CTD_human;ORPHANET;UNIPROT |
Tgene | FGFR2 | C0003090 | Ankylosis | 1 | CTD_human |
Tgene | FGFR2 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | FGFR2 | C0008924 | Cleft Lip | 1 | CTD_human |
Tgene | FGFR2 | C0008925 | Cleft Palate | 1 | CTD_human;HPO |
Tgene | FGFR2 | C0010273 | Craniofacial Dysostosis | 1 | CTD_human;HPO |
Tgene | FGFR2 | C0014170 | Endometrial Neoplasms | 1 | CTD_human |
Tgene | FGFR2 | C0018553 | Hamartoma Syndrome, Multiple | 1 | CTD_human |
Tgene | FGFR2 | C0023890 | Liver Cirrhosis | 1 | CTD_human |
Tgene | FGFR2 | C0024121 | Lung Neoplasms | 1 | CTD_human |
Tgene | FGFR2 | C0026613 | Motor Skills Disorders | 1 | CTD_human |
Tgene | FGFR2 | C0033975 | Psychotic Disorders | 1 | PSYGENET |
Tgene | FGFR2 | C0037268 | Skin Abnormalities | 1 | CTD_human |
Tgene | FGFR2 | C0037274 | Dermatologic disorders | 1 | CTD_human |
Tgene | FGFR2 | C0040427 | Tooth Abnormalities | 1 | CTD_human |
Tgene | FGFR2 | C0080178 | Spina Bifida | 1 | CTD_human |
Tgene | FGFR2 | C0206698 | Cholangiocarcinoma | 1 | CTD_human |
Tgene | FGFR2 | C0206762 | Limb Deformities, Congenital | 1 | CTD_human |
Tgene | FGFR2 | C0265269 | Lacrimoauriculodentodigital syndrome | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | FGFR2 | C0349204 | Nonorganic psychosis | 1 | PSYGENET |
Tgene | FGFR2 | C1450010 | Plagiocephaly, Nonsynostotic | 1 | CTD_human;HPO |
Tgene | FGFR2 | C1852406 | Cutis Gyrata Syndrome of Beare And Stevenson | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | FGFR2 | C2350233 | Antley-Bixler Syndrome Phenotype | 1 | CTD_human |
Tgene | FGFR2 | C3281247 | BENT BONE DYSPLASIA SYNDROME | 1 | ORPHANET;UNIPROT |
Tgene | FGFR2 | C3714756 | Intellectual Disability | 1 | CTD_human;HPO |