FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

FusionGeneSummary

leaf

FusionProtFeature

leaf

FusionGeneSequence

leaf

FusionGenePPI

leaf

RelatedDrugs

leaf

RelatedDiseases

Fusion gene ID: 40329

FusionGeneSummary for UBA52_UBC

check button Fusion gene summary
Fusion gene informationFusion gene name: UBA52_UBC
Fusion gene ID: 40329
HgeneTgene
Gene symbol

UBA52

UBC

Gene ID

7311

7316

Gene nameubiquitin A-52 residue ribosomal protein fusion product 1ubiquitin C
SynonymsCEP52|HUBCEP52|L40|RPL40HMG20
Cytomap

19p13.11

12q24.31

Type of geneprotein-codingprotein-coding
Descriptionubiquitin-60S ribosomal protein L40ubiquitin carboxyl extension protein 52ubiquitin-52 amino acid fusion proteinubiquitin-CEP52polyubiquitin-C
Modification date2018052320180523
UniProtAcc

P62987

P0CG48

Ensembl transtripts involved in fusion geneENST00000596304, ENST00000430157, 
ENST00000596273, ENST00000442744, 
ENST00000595683, ENST00000595158, 
ENST00000598780, ENST00000599551, 
ENST00000597451, ENST00000599595, 
ENST00000536769, ENST00000538617, 
ENST00000546120, ENST00000339647, 
ENST00000536661, 
Fusion gene scores* DoF score15 X 13 X 3=58514 X 14 X 3=588
# samples 1715
** MAII scorelog2(17/585*10)=-1.78290187833307
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(15/588*10)=-1.97085365434048
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: UBA52 [Title/Abstract] AND UBC [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1AA304512UBA52chr19

18684558

+UBCchr17

21731098

+
ChiTaRS3.1N85706UBA52chr19

18684558

+UBCchr12

125397462

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000596304ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596304ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596304ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596304ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596304ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000430157ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000430157ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000430157ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000430157ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000430157ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596273ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596273ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596273ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596273ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000596273ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000442744ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000442744ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000442744ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000442744ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000442744ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595683ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595683ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595683ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595683ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595683ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595158ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595158ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595158ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595158ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000595158ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000598780ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000598780ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000598780ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000598780ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000598780ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599551ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599551ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599551ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599551ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599551ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000597451ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000597451ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000597451ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000597451ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000597451ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599595ENST00000536769UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599595ENST00000538617UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599595ENST00000546120UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599595ENST00000339647UBA52chr19

18684558

+UBCchr17

21731098

+
5CDS-intronENST00000599595ENST00000536661UBA52chr19

18684558

+UBCchr17

21731098

+
In-frameENST00000596304ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596304ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596304ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596304ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596304ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000430157ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000430157ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000430157ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000430157ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000430157ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000596273ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596273ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596273ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596273ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000596273ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000442744ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000442744ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000442744ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000442744ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000442744ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000595683ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595683ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595683ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595683ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595683ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000595158ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595158ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595158ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595158ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000595158ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000598780ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000598780ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000598780ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000598780ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000598780ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000599551ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599551ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599551ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599551ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599551ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000597451ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000597451ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000597451ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000597451ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000597451ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-
In-frameENST00000599595ENST00000536769UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599595ENST00000538617UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599595ENST00000546120UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599595ENST00000339647UBA52chr19

18684558

+UBCchr12

125397462

-
5CDS-intronENST00000599595ENST00000536661UBA52chr19

18684558

+UBCchr12

125397462

-

Top

FusionProtFeatures for UBA52_UBC


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
UBA52

P62987

UBC

P0CG48


check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


Top

FusionGeneSequence for UBA52_UBC


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_UBA52_ENST00000596304_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_63aa

>In-frame_UBA52_ENST00000430157_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_63aa

>In-frame_UBA52_ENST00000595683_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_63aa

>In-frame_UBA52_ENST00000595158_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_63aa


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_UBA52_ENST00000596304_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_190nt
ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAATT
CAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAAC

>In-frame_UBA52_ENST00000430157_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_190nt
ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAATT
CAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAAC

>In-frame_UBA52_ENST00000595683_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_190nt
ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAATT
CAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAAC

>In-frame_UBA52_ENST00000595158_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_190nt
ATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAATT
CAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAAC


* Fusion transcript sequences (Full-length transcript).
>In-frame_UBA52_ENST00000596304_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_305nt
GTTCGCCAGCATCCAAGATGGCGGCAGGGCGGGGCCCAAGGCGCGGCGCGAATTGTGACGCAGGCGTCCGGCGTGCTCCGTGCGCAAGCG
CTTTCGGCGGCGATTAGACGCAAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACAC
CATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGA

>In-frame_UBA52_ENST00000430157_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_284nt
GTGCTCCGTGCGCAAGCGCTTTCGGCGGCGATTAGGTGGTTTCCGGTTCCGCTATCTTCTTTTTCTTCAGCGAGGCGGCCGAGCTGACGC
AAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAA
AATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTA

>In-frame_UBA52_ENST00000596273_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_488nt
ATCTTCTTTTTCTTCAGCGAGGCGGCCGAGCTGATGGAGTCTTGCTCTGTCGCCTAAGCTGGAGTTCAGTGGTGCGGTCTCGGCTCACTG
CAATCTCCACCTCCCGGGCTCGAGCGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGGCGCCTGCCACCACGCCCAGTTGAT
TTTTGTAGTTTTAGTAGAGACGGAGTTTCACCATGTTAGCCAGGCTCATCTTGAACTCTTGACCTCAAATGATCCGTCTGCCTCGGCCTT
CCAAAGTGCTGGGATTACAGACGCAAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGA
CACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGA

>In-frame_UBA52_ENST00000442744_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_248nt
CTTTTTCTTCAGCGAGGCGGCCGAGCTGGTTGGTGGCGGCGGTCGTGCGGACGCAAACATGCAGATCTTTGTGAAGACCCTCACTGGCAA
AACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCA

>In-frame_UBA52_ENST00000595683_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_490nt
GGCGGCCGAGCTGGTTGGTGGCGGCGGTCGTGCGGATGGAGTCTTGCTCTGTCGCCTAAGCTGGAGTTCAGTGGTGCGGTCTCGGCTCAC
TGCAATCTCCACCTCCCGGGCTCGAGCGATTCTTCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGGCGCCTGCCACCACGCCCAGTTG
ATTTTTGTAGTTTTAGTAGAGACGGAGTTTCACCATGTTAGCCAGGCTCATCTTGAACTCTTGACCTCAAATGATCCGTCTGCCTCGGCC
TTCCAAAGTGCTGGGATTACAGACGCAAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGT
GACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTG

>In-frame_UBA52_ENST00000595158_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_462nt
GAGCTGGTTGGTGGCGGCGGTCGTGCGGGTTCGCGCCGGGCCGAGAGCGGGTTGGGGGCTGCGGGAGGCTGCAGGGGCCTGGGCGGCAGA
AGAGGCGGCCCTGAGCTGGCTCATGCGGGCCAGTCTCGGCAGGGTGGCTGGGCAGGGCTCGCGAGGCCACGGCTCGGAGCCCAGACCGGG
GCCCAGGAGGCGAGCGCCGTTTTGGAGAGGAGCCTGCCTGCTCTGCCTGCCAGCGTGACCCCACGAGGCCTCGGGCGGGAAGAGACGCAA
ACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAA
TTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACA

>In-frame_UBA52_ENST00000598780_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_451nt
AGCGGGTTGGGGGCTGCGGGAGGCTGCAGGGGCCTGGGCGGCAGAAGAGGCGGCCCTGAGCTGGCTCATGCGGGCCAGTCTCGGCAGGGT
GGCTGGGCAGGGCTCGCGAGGCCACGGCTCGGAGCCCAGACCGGGGCCCAGGAGGCGAGCGCCGTTTTGGAGAGGAGCCTGCCTGCTCTG
CCTGCCAGCGTGACCCCACGAGGCCTCGGGCGGGAAGAGGTCCTCGGGGCAGATCCGAGTTAATGAGAGAGGGACGCAAACATGCAGATC
TTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAG
GAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAGAAA

>In-frame_UBA52_ENST00000599551_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_419nt
GAGAGTTTTGGTGTAATTGAGAAGGAAGCTAAGAGTGTTGGGTGCTCCAGCTTGGAGTTAGAGAGGAGAGAGGCTGCGACAGGAAGGCAT
GTGTGTTGTAGGGGATGGCTTCCCATCCAGGCTGGCAGCAGGAGCAGCCTGTGCAGATCAGGACCTGGCTGCCGTGGAAGAGGGTGGGAC
CGCCTTCAGGGAAGATGGATCTAGCAAGATGATGCCAAAGGACGCAAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCAC
CCTTGAGGTCGAGCCCAGTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGAT

>In-frame_UBA52_ENST00000597451_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_226nt
GTCTATCCTGCCTCCCTTCCTCCTGCAGACGCAAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAG
CCCAGTGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAA

>In-frame_UBA52_ENST00000599595_chr19_18684558_+_UBC_ENST00000536769_chr12_125397462_-_206nt
TCCTGCAGACGCAAACATGCAGATCTTTGTGAAGACCCTCACTGGCAAAACCATCACCCTTGAGGTCGAGCCCAGTGACACCATTGAGAA
TGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCAC


Top

FusionGenePPI for UBA52_UBC


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for UBA52_UBC


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for UBA52_UBC


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource