|
||||||
|
 | |
| |
| |
| |
| |
|
Fusion gene ID: 40260 |
FusionGeneSummary for TYW1_TRA2A |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: TYW1_TRA2A | Fusion gene ID: 40260 | Hgene | Tgene | Gene symbol | TYW1 | TRA2A | Gene ID | 55253 | 29896 |
| Gene name | tRNA-yW synthesizing protein 1 homolog | transformer 2 alpha homolog | |
| Synonyms | RSAFD1|TYW1A|YPL207W | AWMS1|HSU53209 | |
| Cytomap | 7q11.21 | 7p15.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseradical S-adenosyl methionine and flavodoxin domain-containing protein 1radical S-adenosyl methionine and flavodoxin domains 1tRNA wybutosine-synthesizing protein 1 homologtRNA-yW synthe | transformer-2 protein homolog alphaTRA-2 alphaTRA2-alphaTra2alphahtra-2 alphaputative MAPK activating protein PM24transformer-2 alphatransformer-2 protein homolog A | |
| Modification date | 20180519 | 20180523 | |
| UniProtAcc | Q9NV66 | Q13595 | |
| Ensembl transtripts involved in fusion gene | ENST00000359626, ENST00000491969, | ENST00000297071, ENST00000392502, ENST00000538367, ENST00000474586, | |
| Fusion gene scores | * DoF score | 7 X 5 X 6=210 | 5 X 6 X 5=150 |
| # samples | 7 | 7 | |
| ** MAII score | log2(7/210*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/150*10)=-1.09953567355091 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: TYW1 [Title/Abstract] AND TRA2A [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | TRA2A | GO:0000398 | mRNA splicing, via spliceosome | 9546399 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | STAD | TCGA-CG-4443-01A | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000359626 | ENST00000297071 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| In-frame | ENST00000359626 | ENST00000392502 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| In-frame | ENST00000359626 | ENST00000538367 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| 5CDS-5UTR | ENST00000359626 | ENST00000474586 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| intron-3CDS | ENST00000491969 | ENST00000297071 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| intron-3CDS | ENST00000491969 | ENST00000392502 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| intron-3CDS | ENST00000491969 | ENST00000538367 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
| intron-5UTR | ENST00000491969 | ENST00000474586 | TYW1 | chr7 | 66582605 | + | TRA2A | chr7 | 23552701 | - |
Top |
FusionProtFeatures for TYW1_TRA2A |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| TYW1 | TRA2A |
| Probable component of the wybutosine biosynthesispathway. Wybutosine is a hyper modified guanosine with a tricyclicbase found at the 3'-position adjacent to the anticodon ofeukaryotic phenylalanine tRNA. Catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form thetricyclic 4-demethylwyosine, an intermediate in wybutosinebiosynthesis (By similarity). {ECO:0000250}. | Sequence-specific RNA-binding protein which participatesin the control of pre-mRNA splicing. {ECO:0000269|PubMed:9546399}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | TYW1 | chr7:66582605 | chr7:23552701 | ENST00000359626 | + | 13 | 16 | 79_237 | 566 | 733 | Domain | Flavodoxin-like |
| Hgene | TYW1 | chr7:66582605 | chr7:23552701 | ENST00000359626 | + | 13 | 16 | 176_208 | 566 | 733 | Nucleotide binding | FMN |
| Hgene | TYW1 | chr7:66582605 | chr7:23552701 | ENST00000359626 | + | 13 | 16 | 85_89 | 566 | 733 | Nucleotide binding | FMN |
| Tgene | >TRA2A | chr7:66582605 | chr7:23552701 | ENST00000297071 | - | 2 | 8 | 226_282 | 112 | 283 | Compositional bias | Note=Arg/Ser-rich (RS2 domain) |
| Tgene | >TRA2A | chr7:66582605 | chr7:23552701 | ENST00000297071 | - | 2 | 8 | 119_197 | 112 | 283 | Domain | RRM |
| Tgene | >TRA2A | chr7:66582605 | chr7:23552701 | ENST00000297071 | - | 2 | 8 | 198_225 | 112 | 283 | Region | Note=Linker |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | TRA2A | chr7:66582605 | chr7:23552701 | ENST00000297071 | - | 2 | 8 | 30_112 | 112 | 283 | Compositional bias | Note=Arg/Ser-rich (RS1 domain) |
Top |
FusionGeneSequence for TYW1_TRA2A |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000297071_chr7_23552701_-_737aa MDPSADTWDLFSPLISLWINRFYIYLGFAVSISLWICVQIVIKTQGKNLQEKSVPKAAQDLMTNGYVSLQEKDIFVSGVKIFYGSQTGTA KGFATVLAEAVTSLDLPVAIINLKEYDPDDHLIEEVTSKNVCVFLVATYTDGLPTESAEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLG NSAYASHFNKVGKNVDKWLWMLGAHRVMSRGEGDCDVVKSKHGSIEADFRAWKTKFISQLQALQKGERKKSCGGHCKKGKCESHQHGSEE REEGSHEQDELHHRDTEEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMDHVKKEKREKEQQEEKSGLFRNMGRNEDGERRAMITPAL REALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMILKEAI ENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSLVGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDS LKKIDRPLFKDFWQRFLDSLKALAVKANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEA MERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYEDYDYRYRRRSPSPYYS >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000392502_chr7_23552701_-_736aa MDPSADTWDLFSPLISLWINRFYIYLGFAVSISLWICVQIVIKTQGKNLQEKSVPKAAQDLMTNGYVSLQEKDIFVSGVKIFYGSQTGTA KGFATVLAEAVTSLDLPVAIINLKEYDPDDHLIEEVTSKNVCVFLVATYTDGLPTESAEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLG NSAYASHFNKVGKNVDKWLWMLGAHRVMSRGEGDCDVVKSKHGSIEADFRAWKTKFISQLQALQKGERKKSCGGHCKKGKCESHQHGSEE REEGSHEQDELHHRDTEEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMDHVKKEKREKEQQEEKSGLFRNMGRNEDGERRAMITPAL REALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMILKEAI ENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSLVGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDS LKKIDRPLFKDFWQRFLDSLKALAVKANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEA MERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYEDYDYRYRRSPSPYYSR >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000538367_chr7_23552701_-_737aa MDPSADTWDLFSPLISLWINRFYIYLGFAVSISLWICVQIVIKTQGKNLQEKSVPKAAQDLMTNGYVSLQEKDIFVSGVKIFYGSQTGTA KGFATVLAEAVTSLDLPVAIINLKEYDPDDHLIEEVTSKNVCVFLVATYTDGLPTESAEWFCKWLEEASIDFRFGKTYLKGMRYAVFGLG NSAYASHFNKVGKNVDKWLWMLGAHRVMSRGEGDCDVVKSKHGSIEADFRAWKTKFISQLQALQKGERKKSCGGHCKKGKCESHQHGSEE REEGSHEQDELHHRDTEEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMDHVKKEKREKEQQEEKSGLFRNMGRNEDGERRAMITPAL REALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMILKEAI ENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSLVGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDS LKKIDRPLFKDFWQRFLDSLKALAVKANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEA MERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRRRDSYYDRGYDRGYDRYEDYDYRYRRRSPSPYYS |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000297071_chr7_23552701_-_2211nt ATGGATCCTTCTGCGGATACATGGGACCTCTTCTCACCTTTAATATCATTATGGATAAACAGGTTTTACATTTATTTGGGCTTTGCTGTT AGCATTAGCCTTTGGATTTGTGTCCAGATTGTCATCAAGACGCAGGGCAAGAACTTACAGGAAAAATCTGTTCCAAAAGCAGCTCAGGAT TTGATGACAAATGGTTATGTCTCCCTTCAAGAGAAAGACATCTTTGTGTCTGGAGTGAAGATTTTTTATGGTTCTCAGACTGGAACAGCG AAGGGATTCGCAACAGTTCTTGCTGAAGCAGTTACATCCCTGGATCTGCCTGTGGCCATTATTAATCTAAAAGAATATGATCCAGATGAT CATCTGATAGAAGAGGTGACTAGTAAAAATGTCTGTGTCTTCCTGGTTGCGACATACACTGACGGCCTACCAACTGAAAGTGCAGAGTGG TTCTGCAAATGGTTAGAGGAAGCATCCATTGATTTTCGATTTGGCAAAACTTACCTGAAGGGTATGAGATATGCGGTATTTGGCCTGGGA AATTCTGCCTATGCTAGCCACTTCAACAAGGTTGGCAAAAATGTTGACAAGTGGCTCTGGATGCTTGGCGCGCATCGTGTGATGAGTCGA GGGGAGGGCGACTGCGACGTGGTTAAAAGCAAGCACGGCAGCATTGAGGCCGACTTCAGAGCATGGAAGACCAAGTTCATCTCCCAGCTG CAGGCACTTCAGAAAGGGGAGAGAAAGAAGTCCTGTGGCGGCCACTGCAAGAAAGGCAAATGTGAATCTCACCAACATGGCTCAGAGGAG AGGGAGGAAGGATCTCATGAGCAGGATGAATTGCATCATAGAGACACCGAGGAGGAAGAACCCTTTGAGAGCTCCAGTGAAGAAGAGTTT GGTGGTGAGGACCATCAGAGCCTAAATTCCATTGTTGATGTTGAAGATTTGGGCAAAATTATGGATCATGTGAAGAAAGAAAAGAGAGAA AAGGAACAGCAGGAAGAGAAGTCTGGTTTGTTCAGGAACATGGGGAGGAATGAAGATGGTGAAAGAAGAGCTATGATAACTCCTGCTCTC CGAGAAGCCCTTACTAAACAAGGTTATCAGTTGATTGGGAGCCACTCGGGGGTGAAGCTTTGCAGGTGGACAAAGTCCATGCTCCGAGGG AGAGGAGGTTGTTACAAACACACATTCTATGGAATTGAGAGCCATCGCTGCATGGAAACCACCCCGAGCTTGGCGTGTGCTAATAAATGT GTCTTCTGTTGGCGGCACCACACCAACCCCGTGGGCACTGAGTGGCGGTGGAAGATGGACCAGCCTGAAATGATCTTGAAGGAAGCCATT GAAAACCATCAGAACATGATTAAGCAGTTTAAAGGAGTACCGGGCGTCAAAGCAGAACGCTTTGAAGAAGGAATGACGGTAAAGCACTGT GCATTGTCCCTCGTGGGAGAACCAATAATGTACCCAGAGATCAACAGGTTTTTGAAGCTACTCCACCAGTGTAAAATTTCCAGCTTCCTG GTCACAAACGCACAATTTCCTGCGGAAATCAGGAACCTCGAGCCGGTTACTCAGCTGTATGTCAGTGTGGATGCCAGTACCAAAGACAGC CTGAAGAAAATCGACCGCCCACTCTTCAAGGATTTCTGGCAGAGATTCCTTGACAGTTTAAAAGCCTTGGCAGTCAAGGCAAATCCAGAT CCCAACACTTGCCTTGGAGTGTTTGGCCTCAGTTTGTACACAACAGAGAGGGATCTTCGTGAAGTATTTTCTCGATATGGACCATTGAGT GGTGTCAATGTGGTTTATGATCAGCGAACTGGGCGATCTCGAGGATTTGCTTTTGTGTATTTTGAGAGAATAGATGACTCAAAGGAGGCT ATGGAAAGGGCAAATGGAATGGAGCTGGATGGTAGAAGAATTCGGGTGGATTATTCTATAACCAAGAGAGCGCACACACCAACACCAGGC ATCTACATGGGCAGACCAACTCATAGTGGTGGGGGTGGTGGAGGAGGCGGCGGCGGTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCT TACTATGATAGAGGATATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGATACAGAAGACGATCACCTTCTCCTTATTATAGT >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000392502_chr7_23552701_-_2208nt ATGGATCCTTCTGCGGATACATGGGACCTCTTCTCACCTTTAATATCATTATGGATAAACAGGTTTTACATTTATTTGGGCTTTGCTGTT AGCATTAGCCTTTGGATTTGTGTCCAGATTGTCATCAAGACGCAGGGCAAGAACTTACAGGAAAAATCTGTTCCAAAAGCAGCTCAGGAT TTGATGACAAATGGTTATGTCTCCCTTCAAGAGAAAGACATCTTTGTGTCTGGAGTGAAGATTTTTTATGGTTCTCAGACTGGAACAGCG AAGGGATTCGCAACAGTTCTTGCTGAAGCAGTTACATCCCTGGATCTGCCTGTGGCCATTATTAATCTAAAAGAATATGATCCAGATGAT CATCTGATAGAAGAGGTGACTAGTAAAAATGTCTGTGTCTTCCTGGTTGCGACATACACTGACGGCCTACCAACTGAAAGTGCAGAGTGG TTCTGCAAATGGTTAGAGGAAGCATCCATTGATTTTCGATTTGGCAAAACTTACCTGAAGGGTATGAGATATGCGGTATTTGGCCTGGGA AATTCTGCCTATGCTAGCCACTTCAACAAGGTTGGCAAAAATGTTGACAAGTGGCTCTGGATGCTTGGCGCGCATCGTGTGATGAGTCGA GGGGAGGGCGACTGCGACGTGGTTAAAAGCAAGCACGGCAGCATTGAGGCCGACTTCAGAGCATGGAAGACCAAGTTCATCTCCCAGCTG CAGGCACTTCAGAAAGGGGAGAGAAAGAAGTCCTGTGGCGGCCACTGCAAGAAAGGCAAATGTGAATCTCACCAACATGGCTCAGAGGAG AGGGAGGAAGGATCTCATGAGCAGGATGAATTGCATCATAGAGACACCGAGGAGGAAGAACCCTTTGAGAGCTCCAGTGAAGAAGAGTTT GGTGGTGAGGACCATCAGAGCCTAAATTCCATTGTTGATGTTGAAGATTTGGGCAAAATTATGGATCATGTGAAGAAAGAAAAGAGAGAA AAGGAACAGCAGGAAGAGAAGTCTGGTTTGTTCAGGAACATGGGGAGGAATGAAGATGGTGAAAGAAGAGCTATGATAACTCCTGCTCTC CGAGAAGCCCTTACTAAACAAGGTTATCAGTTGATTGGGAGCCACTCGGGGGTGAAGCTTTGCAGGTGGACAAAGTCCATGCTCCGAGGG AGAGGAGGTTGTTACAAACACACATTCTATGGAATTGAGAGCCATCGCTGCATGGAAACCACCCCGAGCTTGGCGTGTGCTAATAAATGT GTCTTCTGTTGGCGGCACCACACCAACCCCGTGGGCACTGAGTGGCGGTGGAAGATGGACCAGCCTGAAATGATCTTGAAGGAAGCCATT GAAAACCATCAGAACATGATTAAGCAGTTTAAAGGAGTACCGGGCGTCAAAGCAGAACGCTTTGAAGAAGGAATGACGGTAAAGCACTGT GCATTGTCCCTCGTGGGAGAACCAATAATGTACCCAGAGATCAACAGGTTTTTGAAGCTACTCCACCAGTGTAAAATTTCCAGCTTCCTG GTCACAAACGCACAATTTCCTGCGGAAATCAGGAACCTCGAGCCGGTTACTCAGCTGTATGTCAGTGTGGATGCCAGTACCAAAGACAGC CTGAAGAAAATCGACCGCCCACTCTTCAAGGATTTCTGGCAGAGATTCCTTGACAGTTTAAAAGCCTTGGCAGTCAAGGCAAATCCAGAT CCCAACACTTGCCTTGGAGTGTTTGGCCTCAGTTTGTACACAACAGAGAGGGATCTTCGTGAAGTATTTTCTCGATATGGACCATTGAGT GGTGTCAATGTGGTTTATGATCAGCGAACTGGGCGATCTCGAGGATTTGCTTTTGTGTATTTTGAGAGAATAGATGACTCAAAGGAGGCT ATGGAAAGGGCAAATGGAATGGAGCTGGATGGTAGAAGAATTCGGGTGGATTATTCTATAACCAAGAGAGCGCACACACCAACACCAGGC ATCTACATGGGCAGACCAACTCATAGTGGTGGGGGTGGTGGAGGAGGCGGCGGCGGTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCT TACTATGATAGAGGATATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGATACAGACGATCACCTTCTCCTTATTATAGTCGA >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000538367_chr7_23552701_-_2211nt ATGGATCCTTCTGCGGATACATGGGACCTCTTCTCACCTTTAATATCATTATGGATAAACAGGTTTTACATTTATTTGGGCTTTGCTGTT AGCATTAGCCTTTGGATTTGTGTCCAGATTGTCATCAAGACGCAGGGCAAGAACTTACAGGAAAAATCTGTTCCAAAAGCAGCTCAGGAT TTGATGACAAATGGTTATGTCTCCCTTCAAGAGAAAGACATCTTTGTGTCTGGAGTGAAGATTTTTTATGGTTCTCAGACTGGAACAGCG AAGGGATTCGCAACAGTTCTTGCTGAAGCAGTTACATCCCTGGATCTGCCTGTGGCCATTATTAATCTAAAAGAATATGATCCAGATGAT CATCTGATAGAAGAGGTGACTAGTAAAAATGTCTGTGTCTTCCTGGTTGCGACATACACTGACGGCCTACCAACTGAAAGTGCAGAGTGG TTCTGCAAATGGTTAGAGGAAGCATCCATTGATTTTCGATTTGGCAAAACTTACCTGAAGGGTATGAGATATGCGGTATTTGGCCTGGGA AATTCTGCCTATGCTAGCCACTTCAACAAGGTTGGCAAAAATGTTGACAAGTGGCTCTGGATGCTTGGCGCGCATCGTGTGATGAGTCGA GGGGAGGGCGACTGCGACGTGGTTAAAAGCAAGCACGGCAGCATTGAGGCCGACTTCAGAGCATGGAAGACCAAGTTCATCTCCCAGCTG CAGGCACTTCAGAAAGGGGAGAGAAAGAAGTCCTGTGGCGGCCACTGCAAGAAAGGCAAATGTGAATCTCACCAACATGGCTCAGAGGAG AGGGAGGAAGGATCTCATGAGCAGGATGAATTGCATCATAGAGACACCGAGGAGGAAGAACCCTTTGAGAGCTCCAGTGAAGAAGAGTTT GGTGGTGAGGACCATCAGAGCCTAAATTCCATTGTTGATGTTGAAGATTTGGGCAAAATTATGGATCATGTGAAGAAAGAAAAGAGAGAA AAGGAACAGCAGGAAGAGAAGTCTGGTTTGTTCAGGAACATGGGGAGGAATGAAGATGGTGAAAGAAGAGCTATGATAACTCCTGCTCTC CGAGAAGCCCTTACTAAACAAGGTTATCAGTTGATTGGGAGCCACTCGGGGGTGAAGCTTTGCAGGTGGACAAAGTCCATGCTCCGAGGG AGAGGAGGTTGTTACAAACACACATTCTATGGAATTGAGAGCCATCGCTGCATGGAAACCACCCCGAGCTTGGCGTGTGCTAATAAATGT GTCTTCTGTTGGCGGCACCACACCAACCCCGTGGGCACTGAGTGGCGGTGGAAGATGGACCAGCCTGAAATGATCTTGAAGGAAGCCATT GAAAACCATCAGAACATGATTAAGCAGTTTAAAGGAGTACCGGGCGTCAAAGCAGAACGCTTTGAAGAAGGAATGACGGTAAAGCACTGT GCATTGTCCCTCGTGGGAGAACCAATAATGTACCCAGAGATCAACAGGTTTTTGAAGCTACTCCACCAGTGTAAAATTTCCAGCTTCCTG GTCACAAACGCACAATTTCCTGCGGAAATCAGGAACCTCGAGCCGGTTACTCAGCTGTATGTCAGTGTGGATGCCAGTACCAAAGACAGC CTGAAGAAAATCGACCGCCCACTCTTCAAGGATTTCTGGCAGAGATTCCTTGACAGTTTAAAAGCCTTGGCAGTCAAGGCAAATCCAGAT CCCAACACTTGCCTTGGAGTGTTTGGCCTCAGTTTGTACACAACAGAGAGGGATCTTCGTGAAGTATTTTCTCGATATGGACCATTGAGT GGTGTCAATGTGGTTTATGATCAGCGAACTGGGCGATCTCGAGGATTTGCTTTTGTGTATTTTGAGAGAATAGATGACTCAAAGGAGGCT ATGGAAAGGGCAAATGGAATGGAGCTGGATGGTAGAAGAATTCGGGTGGATTATTCTATAACCAAGAGAGCGCACACACCAACACCAGGC ATCTACATGGGCAGACCAACTCATAGTGGTGGGGGTGGTGGAGGAGGCGGCGGCGGTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCT TACTATGATAGAGGATATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGATACAGAAGACGATCACCTTCTCCTTATTATAGT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000297071_chr7_23552701_-_3154nt GAACCAATCAGGACCGGCCTGGCAGTGTCATGGCTGCCCACAGGTCTGCAGGCACTCGGTACGCCGCTAACGCGGCGAGGTAGCTCGGTG CGTCTCGCGGTACCAGTGCGAATCATCGGGCTATCCAGGTCCGAGATCCTAGTCTCCTGTCGGCTCTGAGGAGGATGGATCCTTCTGCGG ATACATGGGACCTCTTCTCACCTTTAATATCATTATGGATAAACAGGTTTTACATTTATTTGGGCTTTGCTGTTAGCATTAGCCTTTGGA TTTGTGTCCAGATTGTCATCAAGACGCAGGGCAAGAACTTACAGGAAAAATCTGTTCCAAAAGCAGCTCAGGATTTGATGACAAATGGTT ATGTCTCCCTTCAAGAGAAAGACATCTTTGTGTCTGGAGTGAAGATTTTTTATGGTTCTCAGACTGGAACAGCGAAGGGATTCGCAACAG TTCTTGCTGAAGCAGTTACATCCCTGGATCTGCCTGTGGCCATTATTAATCTAAAAGAATATGATCCAGATGATCATCTGATAGAAGAGG TGACTAGTAAAAATGTCTGTGTCTTCCTGGTTGCGACATACACTGACGGCCTACCAACTGAAAGTGCAGAGTGGTTCTGCAAATGGTTAG AGGAAGCATCCATTGATTTTCGATTTGGCAAAACTTACCTGAAGGGTATGAGATATGCGGTATTTGGCCTGGGAAATTCTGCCTATGCTA GCCACTTCAACAAGGTTGGCAAAAATGTTGACAAGTGGCTCTGGATGCTTGGCGCGCATCGTGTGATGAGTCGAGGGGAGGGCGACTGCG ACGTGGTTAAAAGCAAGCACGGCAGCATTGAGGCCGACTTCAGAGCATGGAAGACCAAGTTCATCTCCCAGCTGCAGGCACTTCAGAAAG GGGAGAGAAAGAAGTCCTGTGGCGGCCACTGCAAGAAAGGCAAATGTGAATCTCACCAACATGGCTCAGAGGAGAGGGAGGAAGGATCTC ATGAGCAGGATGAATTGCATCATAGAGACACCGAGGAGGAAGAACCCTTTGAGAGCTCCAGTGAAGAAGAGTTTGGTGGTGAGGACCATC AGAGCCTAAATTCCATTGTTGATGTTGAAGATTTGGGCAAAATTATGGATCATGTGAAGAAAGAAAAGAGAGAAAAGGAACAGCAGGAAG AGAAGTCTGGTTTGTTCAGGAACATGGGGAGGAATGAAGATGGTGAAAGAAGAGCTATGATAACTCCTGCTCTCCGAGAAGCCCTTACTA AACAAGGTTATCAGTTGATTGGGAGCCACTCGGGGGTGAAGCTTTGCAGGTGGACAAAGTCCATGCTCCGAGGGAGAGGAGGTTGTTACA AACACACATTCTATGGAATTGAGAGCCATCGCTGCATGGAAACCACCCCGAGCTTGGCGTGTGCTAATAAATGTGTCTTCTGTTGGCGGC ACCACACCAACCCCGTGGGCACTGAGTGGCGGTGGAAGATGGACCAGCCTGAAATGATCTTGAAGGAAGCCATTGAAAACCATCAGAACA TGATTAAGCAGTTTAAAGGAGTACCGGGCGTCAAAGCAGAACGCTTTGAAGAAGGAATGACGGTAAAGCACTGTGCATTGTCCCTCGTGG GAGAACCAATAATGTACCCAGAGATCAACAGGTTTTTGAAGCTACTCCACCAGTGTAAAATTTCCAGCTTCCTGGTCACAAACGCACAAT TTCCTGCGGAAATCAGGAACCTCGAGCCGGTTACTCAGCTGTATGTCAGTGTGGATGCCAGTACCAAAGACAGCCTGAAGAAAATCGACC GCCCACTCTTCAAGGATTTCTGGCAGAGATTCCTTGACAGTTTAAAAGCCTTGGCAGTCAAGGCAAATCCAGATCCCAACACTTGCCTTG GAGTGTTTGGCCTCAGTTTGTACACAACAGAGAGGGATCTTCGTGAAGTATTTTCTCGATATGGACCATTGAGTGGTGTCAATGTGGTTT ATGATCAGCGAACTGGGCGATCTCGAGGATTTGCTTTTGTGTATTTTGAGAGAATAGATGACTCAAAGGAGGCTATGGAAAGGGCAAATG GAATGGAGCTGGATGGTAGAAGAATTCGGGTGGATTATTCTATAACCAAGAGAGCGCACACACCAACACCAGGCATCTACATGGGCAGAC CAACTCATAGTGGTGGGGGTGGTGGAGGAGGCGGCGGCGGTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCTTACTATGATAGAGGAT ATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGATACAGAAGACGATCACCTTCTCCTTATTATAGTCGATATAGATCACGAT CAAGATCTCGTTCCTACAGCCCAAGACGCTATTGATAACGGAATGGTTGCAATTAAGGACATTTTTTTTCCTCTTTTTTTTTTTTTTTTT TTTAATTCTGAGATTTCCCCAAGCTGTGGATTCTTCCTACTCCTTAAGAAAAAAACTTTGGTTTATTTAGCATCTACACTTTTGTCAGTT GTGTTGCTGTTTTCCACCCATTTTATTATACTCTTAAAAGATGTAATTGTTGTCATTTTGAACAGTTAAACATCTTGAGTATAAAAAGAA CCCCAATGTTATGTTATGCTTTGTAAATTTTTTTTTTTGCTTTTACCTAGATAAACTTCTAGCTAATCAAATAAGGAAAGAAACTGTCTT TTTAAAGCTTCTTTTGTGTTAGATACTGTATTAGAGATCTGCATTTATCATGAGTTCCTTTTTTTTTTTAACTTTATTTTTGGGAAAGTA ACACATGAAGTAGTTCAGTCATGTCAGGTTTGTCTGGGGTGGAATGGAACAGTCAGGTAGTTGAAAGTTTTTTTTTAGAGATGAAAAGCT TGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTGTTAAAACTTAAAAACTAAAGTGTGATTTTTTTTGTTGTTGTTAAGTTTA TTGAAGTTTATTCCCTTAATCAGTGAAGGACAACCCTTATTTATTACCTAGAGCAGTTGTATAATTCGCTGTTAGAAATTTTGGTATTGG GACAGTGGATAAGCAGGTTATCACATAGCATAGAATTCTTAAAAGATACATGTGGGGAAAAGTAGTCTCAAATAAAAGCTAATTTCTTTG >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000392502_chr7_23552701_-_2781nt GAACCAATCAGGACCGGCCTGGCAGTGTCATGGCTGCCCACAGGTCTGCAGGCACTCGGTACGCCGCTAACGCGGCGAGGTAGCTCGGTG CGTCTCGCGGTACCAGTGCGAATCATCGGGCTATCCAGGTCCGAGATCCTAGTCTCCTGTCGGCTCTGAGGAGGATGGATCCTTCTGCGG ATACATGGGACCTCTTCTCACCTTTAATATCATTATGGATAAACAGGTTTTACATTTATTTGGGCTTTGCTGTTAGCATTAGCCTTTGGA TTTGTGTCCAGATTGTCATCAAGACGCAGGGCAAGAACTTACAGGAAAAATCTGTTCCAAAAGCAGCTCAGGATTTGATGACAAATGGTT ATGTCTCCCTTCAAGAGAAAGACATCTTTGTGTCTGGAGTGAAGATTTTTTATGGTTCTCAGACTGGAACAGCGAAGGGATTCGCAACAG TTCTTGCTGAAGCAGTTACATCCCTGGATCTGCCTGTGGCCATTATTAATCTAAAAGAATATGATCCAGATGATCATCTGATAGAAGAGG TGACTAGTAAAAATGTCTGTGTCTTCCTGGTTGCGACATACACTGACGGCCTACCAACTGAAAGTGCAGAGTGGTTCTGCAAATGGTTAG AGGAAGCATCCATTGATTTTCGATTTGGCAAAACTTACCTGAAGGGTATGAGATATGCGGTATTTGGCCTGGGAAATTCTGCCTATGCTA GCCACTTCAACAAGGTTGGCAAAAATGTTGACAAGTGGCTCTGGATGCTTGGCGCGCATCGTGTGATGAGTCGAGGGGAGGGCGACTGCG ACGTGGTTAAAAGCAAGCACGGCAGCATTGAGGCCGACTTCAGAGCATGGAAGACCAAGTTCATCTCCCAGCTGCAGGCACTTCAGAAAG GGGAGAGAAAGAAGTCCTGTGGCGGCCACTGCAAGAAAGGCAAATGTGAATCTCACCAACATGGCTCAGAGGAGAGGGAGGAAGGATCTC ATGAGCAGGATGAATTGCATCATAGAGACACCGAGGAGGAAGAACCCTTTGAGAGCTCCAGTGAAGAAGAGTTTGGTGGTGAGGACCATC AGAGCCTAAATTCCATTGTTGATGTTGAAGATTTGGGCAAAATTATGGATCATGTGAAGAAAGAAAAGAGAGAAAAGGAACAGCAGGAAG AGAAGTCTGGTTTGTTCAGGAACATGGGGAGGAATGAAGATGGTGAAAGAAGAGCTATGATAACTCCTGCTCTCCGAGAAGCCCTTACTA AACAAGGTTATCAGTTGATTGGGAGCCACTCGGGGGTGAAGCTTTGCAGGTGGACAAAGTCCATGCTCCGAGGGAGAGGAGGTTGTTACA AACACACATTCTATGGAATTGAGAGCCATCGCTGCATGGAAACCACCCCGAGCTTGGCGTGTGCTAATAAATGTGTCTTCTGTTGGCGGC ACCACACCAACCCCGTGGGCACTGAGTGGCGGTGGAAGATGGACCAGCCTGAAATGATCTTGAAGGAAGCCATTGAAAACCATCAGAACA TGATTAAGCAGTTTAAAGGAGTACCGGGCGTCAAAGCAGAACGCTTTGAAGAAGGAATGACGGTAAAGCACTGTGCATTGTCCCTCGTGG GAGAACCAATAATGTACCCAGAGATCAACAGGTTTTTGAAGCTACTCCACCAGTGTAAAATTTCCAGCTTCCTGGTCACAAACGCACAAT TTCCTGCGGAAATCAGGAACCTCGAGCCGGTTACTCAGCTGTATGTCAGTGTGGATGCCAGTACCAAAGACAGCCTGAAGAAAATCGACC GCCCACTCTTCAAGGATTTCTGGCAGAGATTCCTTGACAGTTTAAAAGCCTTGGCAGTCAAGGCAAATCCAGATCCCAACACTTGCCTTG GAGTGTTTGGCCTCAGTTTGTACACAACAGAGAGGGATCTTCGTGAAGTATTTTCTCGATATGGACCATTGAGTGGTGTCAATGTGGTTT ATGATCAGCGAACTGGGCGATCTCGAGGATTTGCTTTTGTGTATTTTGAGAGAATAGATGACTCAAAGGAGGCTATGGAAAGGGCAAATG GAATGGAGCTGGATGGTAGAAGAATTCGGGTGGATTATTCTATAACCAAGAGAGCGCACACACCAACACCAGGCATCTACATGGGCAGAC CAACTCATAGTGGTGGGGGTGGTGGAGGAGGCGGCGGCGGTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCTTACTATGATAGAGGAT ATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGATACAGACGATCACCTTCTCCTTATTATAGTCGATATAGATCACGATCAA GATCTCGTTCCTACAGCCCAAGACGCTATTGATAACGGAATGGTTGCAATTAAGGACATTTTTTTTCCTCTTTTTTTTTTTTTTTTTTTT AATTCTGAGATTTCCCCAAGCTGTGGATTCTTCCTACTCCTTAAGAAAAAAACTTTGGTTTATTTAGCATCTACACTTTTGTCAGTTGTG TTGCTGTTTTCCACCCATTTTATTATACTCTTAAAAGATGTAATTGTTGTCATTTTGAACAGTTAAACATCTTGAGTATAAAAAGAACCC CAATGTTATGTTATGCTTTGTAAATTTTTTTTTTTGCTTTTACCTAGATAAACTTCTAGCTAATCAAATAAGGAAAGAAACTGTCTTTTT >In-frame_TYW1_ENST00000359626_chr7_66582605_+_TRA2A_ENST00000538367_chr7_23552701_-_2475nt GAACCAATCAGGACCGGCCTGGCAGTGTCATGGCTGCCCACAGGTCTGCAGGCACTCGGTACGCCGCTAACGCGGCGAGGTAGCTCGGTG CGTCTCGCGGTACCAGTGCGAATCATCGGGCTATCCAGGTCCGAGATCCTAGTCTCCTGTCGGCTCTGAGGAGGATGGATCCTTCTGCGG ATACATGGGACCTCTTCTCACCTTTAATATCATTATGGATAAACAGGTTTTACATTTATTTGGGCTTTGCTGTTAGCATTAGCCTTTGGA TTTGTGTCCAGATTGTCATCAAGACGCAGGGCAAGAACTTACAGGAAAAATCTGTTCCAAAAGCAGCTCAGGATTTGATGACAAATGGTT ATGTCTCCCTTCAAGAGAAAGACATCTTTGTGTCTGGAGTGAAGATTTTTTATGGTTCTCAGACTGGAACAGCGAAGGGATTCGCAACAG TTCTTGCTGAAGCAGTTACATCCCTGGATCTGCCTGTGGCCATTATTAATCTAAAAGAATATGATCCAGATGATCATCTGATAGAAGAGG TGACTAGTAAAAATGTCTGTGTCTTCCTGGTTGCGACATACACTGACGGCCTACCAACTGAAAGTGCAGAGTGGTTCTGCAAATGGTTAG AGGAAGCATCCATTGATTTTCGATTTGGCAAAACTTACCTGAAGGGTATGAGATATGCGGTATTTGGCCTGGGAAATTCTGCCTATGCTA GCCACTTCAACAAGGTTGGCAAAAATGTTGACAAGTGGCTCTGGATGCTTGGCGCGCATCGTGTGATGAGTCGAGGGGAGGGCGACTGCG ACGTGGTTAAAAGCAAGCACGGCAGCATTGAGGCCGACTTCAGAGCATGGAAGACCAAGTTCATCTCCCAGCTGCAGGCACTTCAGAAAG GGGAGAGAAAGAAGTCCTGTGGCGGCCACTGCAAGAAAGGCAAATGTGAATCTCACCAACATGGCTCAGAGGAGAGGGAGGAAGGATCTC ATGAGCAGGATGAATTGCATCATAGAGACACCGAGGAGGAAGAACCCTTTGAGAGCTCCAGTGAAGAAGAGTTTGGTGGTGAGGACCATC AGAGCCTAAATTCCATTGTTGATGTTGAAGATTTGGGCAAAATTATGGATCATGTGAAGAAAGAAAAGAGAGAAAAGGAACAGCAGGAAG AGAAGTCTGGTTTGTTCAGGAACATGGGGAGGAATGAAGATGGTGAAAGAAGAGCTATGATAACTCCTGCTCTCCGAGAAGCCCTTACTA AACAAGGTTATCAGTTGATTGGGAGCCACTCGGGGGTGAAGCTTTGCAGGTGGACAAAGTCCATGCTCCGAGGGAGAGGAGGTTGTTACA AACACACATTCTATGGAATTGAGAGCCATCGCTGCATGGAAACCACCCCGAGCTTGGCGTGTGCTAATAAATGTGTCTTCTGTTGGCGGC ACCACACCAACCCCGTGGGCACTGAGTGGCGGTGGAAGATGGACCAGCCTGAAATGATCTTGAAGGAAGCCATTGAAAACCATCAGAACA TGATTAAGCAGTTTAAAGGAGTACCGGGCGTCAAAGCAGAACGCTTTGAAGAAGGAATGACGGTAAAGCACTGTGCATTGTCCCTCGTGG GAGAACCAATAATGTACCCAGAGATCAACAGGTTTTTGAAGCTACTCCACCAGTGTAAAATTTCCAGCTTCCTGGTCACAAACGCACAAT TTCCTGCGGAAATCAGGAACCTCGAGCCGGTTACTCAGCTGTATGTCAGTGTGGATGCCAGTACCAAAGACAGCCTGAAGAAAATCGACC GCCCACTCTTCAAGGATTTCTGGCAGAGATTCCTTGACAGTTTAAAAGCCTTGGCAGTCAAGGCAAATCCAGATCCCAACACTTGCCTTG GAGTGTTTGGCCTCAGTTTGTACACAACAGAGAGGGATCTTCGTGAAGTATTTTCTCGATATGGACCATTGAGTGGTGTCAATGTGGTTT ATGATCAGCGAACTGGGCGATCTCGAGGATTTGCTTTTGTGTATTTTGAGAGAATAGATGACTCAAAGGAGGCTATGGAAAGGGCAAATG GAATGGAGCTGGATGGTAGAAGAATTCGGGTGGATTATTCTATAACCAAGAGAGCGCACACACCAACACCAGGCATCTACATGGGCAGAC CAACTCATAGTGGTGGGGGTGGTGGAGGAGGCGGCGGCGGTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCTTACTATGATAGAGGAT ATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGATACAGAAGACGATCACCTTCTCCTTATTATAGTCGATATAGATCACGAT CAAGATCTCGTTCCTACAGCCCAAGACGCTATTGATAACGGAATGGTTGCAATTAAGGACATTTTTTTTCCTCTTTTTTTTTTTTTTTTT |
Top |
FusionGenePPI for TYW1_TRA2A |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| TYW1 | ELAVL1, MMS19, LYN, FAM96B, CIAO1, SPINT2, TMEM59, TSPAN17, BTN2A1, FAM189A2, EVA1C, LRRTM2, ZNRF4, GDPD5, LRRTM1, KLHL40, DLK2, RGS20, KCNS3, KCNC4, PCDHA3, NMUR2, PCDHGB4, IL17RC, RNF170, PDGFRB, IL17RB, GPR156, TMPRSS3, CHRND, ADAM33, PCDHGA5, PMEL, PCDHAC1, ATP6V0A2 | TRA2A | TADA2A, YWHAG, NUDT21, SELENBP1, CRABP1, TNNT1, CDK2AP2, C11orf58, ELAVL1, CUL3, CUL5, COPS5, SRSF10, RBM25, SRSF5, CDC5L, SEPT2, NFIA, NHP2L1, NCSTN, SF3A1, BUD31, SF3B3, PHGDH, S100A9, HNRNPC, HNRNPU, PRPF40A, SF3B6, HNRNPM, SAP18, PRPF6, IK, HP1BP3, SEPT7, SMARCB1, PLEC, BARD1, PAXIP1, MAGOH, EIF4A3, PPP1CC, DHX15, U2SURP, CDK6, LBP, NXF1, YTHDC1, CLK3, SRPK2, OBSL1, EZH2, SUZ12, EED, RNF2, BMI1, ZNF22, LARP7, SRRM1, MRPS9, MRPS26, THRAP3, LUC7L2, LUC7L, ZNF768, PTCD1, PTCD3, SRRM2, C17orf85, ZFR, PABPC4L, PABPC4, RBBP6, ELAVL2, RPL6, MRPS23, MRPS27, TRUB2, MRPS6, RPL26L1, MTERF3, PAIP1, MRPS18B, MRPL32, C10orf2, MRPS10, DAP3, MEPCE, UPF1, PPIG, LARP1, LARP1B, PHAX, MRPS31, MKRN1, MRPS18C, MRPS5, MRPS7, MRPS22, MRPS15, MRPS35, MRPS25, RRP9, NGRN, MRPS2, MOV10, MRPS33, SRRT, PRPF3, MRPS11, PNN, SRP14, GAR1, MRPS24, CASC3, WDR33, CSNK1E, CSNK1D, MRPS14, GAPDHS, ZCCHC3, MKRN2, ZC3H11A, NOA1, TRA2B, ISY1, SRSF8, CLK1, SRSF7, APOBEC3F, HIST1H2AG, SRSF12, CLK2, MRPL34, MRPS21, SNIP1, NTRK1, SRSF3, SRSF6, EWSR1, CNTRL, CDK2, FEN1, U2AF2, SNRNP70, ZC3H18, C11orf57, SNRPN, NCOA5, PABPC1, SYF2, APOBEC3D, NR3C1, FOXA1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for TYW1_TRA2A |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for TYW1_TRA2A |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | TRA2A | C0037274 | Dermatologic disorders | 1 | CTD_human |
| Tgene | TRA2A | C0311375 | Arsenic Poisoning | 1 | CTD_human |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|