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Fusion gene ID: 40211 |
FusionGeneSummary for TXNL1_LRP1B |
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Fusion gene information | Fusion gene name: TXNL1_LRP1B | Fusion gene ID: 40211 | Hgene | Tgene | Gene symbol | TXNL1 | LRP1B | Gene ID | 9352 | 53353 |
Gene name | thioredoxin like 1 | LDL receptor related protein 1B | |
Synonyms | HEL-S-114|TRP32|TXL-1|TXNL|Txl | LRP-1B|LRP-DIT|LRPDIT | |
Cytomap | 18q21.31 | 2q22.1-q22.2 | |
Type of gene | protein-coding | protein-coding | |
Description | thioredoxin-like protein 132 kDa thioredoxin-related proteinepididymis secretory protein Li 114thioredoxin-related 32 kDa proteinthioredoxin-related protein 1 | low-density lipoprotein receptor-related protein 1BLRP-deleted in tumorslow density lipoprotein receptor related protein-deleted in tumorlow density lipoprotein receptor-related protein 1Blow density lipoprotein-related protein 1B (deleted in tumors) | |
Modification date | 20180522 | 20180519 | |
UniProtAcc | O43396 | Q9NZR2 | |
Ensembl transtripts involved in fusion gene | ENST00000217515, ENST00000585497, ENST00000590954, ENST00000540155, | ENST00000389484, ENST00000486364, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 5 X 5 X 4=100 |
# samples | 2 | 5 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(5/100*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TXNL1 [Title/Abstract] AND LRP1B [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BLCA | TCGA-G2-A2EF-01A | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000217515 | ENST00000389484 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
5CDS-intron | ENST00000217515 | ENST00000486364 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
intron-3CDS | ENST00000585497 | ENST00000389484 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
intron-intron | ENST00000585497 | ENST00000486364 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
Frame-shift | ENST00000590954 | ENST00000389484 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
5CDS-intron | ENST00000590954 | ENST00000486364 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
5UTR-3CDS | ENST00000540155 | ENST00000389484 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
5UTR-intron | ENST00000540155 | ENST00000486364 | TXNL1 | chr18 | 54305574 | - | LRP1B | chr2 | 141299540 | - |
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FusionProtFeatures for TXNL1_LRP1B |
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Hgene | Tgene |
TXNL1 | LRP1B |
Active thioredoxin with a redox potential of about -250mV. {ECO:0000269|PubMed:19349277}. | Potential cell surface proteins that bind andinternalize ligands in the process of receptor-mediatedendocytosis. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2464_2504 | 2398 | 4600 | Domain | EGF-like 10 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2509_2548 | 2398 | 4600 | Domain | LDL-receptor class A 11 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2551_2587 | 2398 | 4600 | Domain | LDL-receptor class A 12 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2590_2626 | 2398 | 4600 | Domain | LDL-receptor class A 13 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2629_2675 | 2398 | 4600 | Domain | LDL-receptor class A 14 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2681_2717 | 2398 | 4600 | Domain | LDL-receptor class A 15 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2719_2757 | 2398 | 4600 | Domain | LDL-receptor class A 16 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2760_2800 | 2398 | 4600 | Domain | LDL-receptor class A 17 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2804_2841 | 2398 | 4600 | Domain | LDL-receptor class A 18 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2844_2885 | 2398 | 4600 | Domain | LDL-receptor class A 19 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2890_2926 | 2398 | 4600 | Domain | LDL-receptor class A 20 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2927_2967 | 2398 | 4600 | Domain | EGF-like 11 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2968_3008 | 2398 | 4600 | Domain | EGF-like 12%3B calcium-binding |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3273_3314 | 2398 | 4600 | Domain | EGF-like 13 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3316_3353 | 2398 | 4600 | Domain | LDL-receptor class A 21 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3356_3392 | 2398 | 4600 | Domain | LDL-receptor class A 22 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3395_3432 | 2398 | 4600 | Domain | LDL-receptor class A 23 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3435_3472 | 2398 | 4600 | Domain | LDL-receptor class A 24 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3475_3511 | 2398 | 4600 | Domain | LDL-receptor class A 25 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3514_3550 | 2398 | 4600 | Domain | LDL-receptor class A 26 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3552_3588 | 2398 | 4600 | Domain | LDL-receptor class A 27 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3593_3629 | 2398 | 4600 | Domain | LDL-receptor class A 28 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3631_3668 | 2398 | 4600 | Domain | LDL-receptor class A 29 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3673_3711 | 2398 | 4600 | Domain | LDL-receptor class A 30 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3714_3752 | 2398 | 4600 | Domain | LDL-receptor class A 31 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3761_3797 | 2398 | 4600 | Domain | LDL-receptor class A 32 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3801_3843 | 2398 | 4600 | Domain | EGF-like 14 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3844_3881 | 2398 | 4600 | Domain | EGF-like 15 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4171_4208 | 2398 | 4600 | Domain | EGF-like 16 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4213_4249 | 2398 | 4600 | Domain | EGF-like 17 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4249_4285 | 2398 | 4600 | Domain | EGF-like 18 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4285_4321 | 2398 | 4600 | Domain | EGF-like 19 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4321_4357 | 2398 | 4600 | Domain | EGF-like 20 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4357_4392 | 2398 | 4600 | Domain | EGF-like 21 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4390_4427 | 2398 | 4600 | Domain | EGF-like 22 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4492_4495 | 2398 | 4600 | Motif | Endocytosis signal |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4559_4562 | 2398 | 4600 | Motif | Endocytosis signal |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2417_2459 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 25 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3055_3098 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 26 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3099_3141 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 27 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3142_3185 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 28 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3186_3224 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 29 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3225_3268 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 30 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3933_3980 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 31 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 3981_4038 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 32 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4039_4082 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 33 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4083_4127 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 34 |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4468_4599 | 2398 | 4600 | Topological domain | Cytoplasmic |
Tgene | >LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 4445_4467 | 2398 | 4600 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >TXNL1 | chr18:54305574 | chr2:141299540 | ENST00000217515 | - | 1 | 8 | 115_285 | 32 | 290 | Domain | PITH |
Hgene | >TXNL1 | chr18:54305574 | chr2:141299540 | ENST00000217515 | - | 1 | 8 | 2_109 | 32 | 290 | Domain | Note=Thioredoxin |
Hgene | >TXNL1 | chr18:54305574 | chr2:141299540 | ENST00000590954 | - | 3 | 10 | 115_285 | 32 | 290 | Domain | PITH |
Hgene | >TXNL1 | chr18:54305574 | chr2:141299540 | ENST00000590954 | - | 3 | 10 | 2_109 | 32 | 290 | Domain | Note=Thioredoxin |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1005_1043 | 2398 | 4600 | Domain | LDL-receptor class A 7 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1052_1089 | 2398 | 4600 | Domain | LDL-receptor class A 8 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1094_1132 | 2398 | 4600 | Domain | LDL-receptor class A 9 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1135_1174 | 2398 | 4600 | Domain | LDL-receptor class A 10 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 116_154 | 2398 | 4600 | Domain | EGF-like 1 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1174_1213 | 2398 | 4600 | Domain | EGF-like 5 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1214_1253 | 2398 | 4600 | Domain | EGF-like 6 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1527_1570 | 2398 | 4600 | Domain | EGF-like 7 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 155_194 | 2398 | 4600 | Domain | EGF-like 2%3B calcium-binding |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1834_1875 | 2398 | 4600 | Domain | EGF-like 8 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2143_2183 | 2398 | 4600 | Domain | EGF-like 9 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 31_70 | 2398 | 4600 | Domain | LDL-receptor class A 1 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 471_517 | 2398 | 4600 | Domain | EGF-like 3 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 76_114 | 2398 | 4600 | Domain | LDL-receptor class A 2 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 794_834 | 2398 | 4600 | Domain | EGF-like 4 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 844_882 | 2398 | 4600 | Domain | LDL-receptor class A 3 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 885_923 | 2398 | 4600 | Domain | LDL-receptor class A 4 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 926_963 | 2398 | 4600 | Domain | LDL-receptor class A 5 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 966_1003 | 2398 | 4600 | Domain | LDL-receptor class A 6 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1300_1346 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 8 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1347_1389 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 9 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1390_1436 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 10 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1437_1480 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 11 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1481_1522 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 12 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1618_1660 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 13 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1661_1704 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 14 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1705_1744 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 15 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1745_1787 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 16 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1922_1964 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 17 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 1965_2007 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 28 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2008_2051 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 19 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2052_2095 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 20 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2239_2280 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 21 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2281_2329 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 22 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2330_2374 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 23 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 2375_2416 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 24 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 295_337 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 1 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 338_381 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 2 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 382_425 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 3 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 568_610 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 4 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 611_656 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 5 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 657_706 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 6 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 707_750 | 2398 | 4600 | Repeat | Note=LDL-receptor class B 7 |
Tgene | LRP1B | chr18:54305574 | chr2:141299540 | ENST00000389484 | - | 42 | 91 | 25_4444 | 2398 | 4600 | Topological domain | Extracellular |
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FusionGeneSequence for TXNL1_LRP1B |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_TXNL1_ENST00000217515_chr18_54305574_-_LRP1B_ENST00000389484_chr2_141299540_-_2234aa MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGXXLNLGQGLSSVWLFMTIIYSGRTGEEELYCGPTSTQEEIQKFFVPIFHISQWESXL LPMTPIAVNFLHVHYXMEAAMTCAFXLPMGEXIVPAEGTEYCXRTTDVXLKIPPATLIRSLNVEMVSALTTSSPVMAFLTVKINQMKNCS TVKTEAVEEASSHAIIAAAFLMASYVMEKMTAETTLMNXIVKFQPVPRLSSAVQMGLVFQDQHDATRTXIVQMLQMKRTAITQTAHISIS LEXKPQGSXDVILPHCVFCQPGYATGLMTVETIQMNXSAQFKTNTNVKKIILVVLVEDAFXIPGYAMVRKIVRMDVMNSTVILLALGTNL LVPHKNVFLSIGFVMEKMTVGMGXMKVTAFVVPXPVLLTCSAARALVPACPDIGFVMVKGTVQMEAMSFPQQAALPIIHVMKMLSCAIIK YAFPSNLFVTMMTTVEMALMSHRSVDIDSVVQKNLVVLMGGVFXILNGSVMETLTVLTILMKHLXTQSVKVQNSHATVHFLCAKMAGAFP VEVFATIRMTVAMVQMRETAIXMNVXVRKSVDVLKTVKTFRSVISANAGLDSNXRMTAKHVXTLMNALQAFPVASNASIHTGLTSASVQM GMKYNLITQMAANRSQMKNLFXFLLIIMRXGKLALMAPTTHFXNRDXTMLLLXTLITEKNSSIGSILADPMAVAXIECVXMEVTLRXFIT QRSPMHLLSIGLEKTSIGLTQKKESLKYPNSMACTLLYSLAKGXSFPETCLXILKLDICIGLTAASILILAVLEWMEPIRVLSXKPRFLD LWHXQXIMLIVDSTGPMKITLNLATWMDLIDTKSLIKIFQGXLHXHCLKTTSTGLMGKPSHSAVPIKHREQTDSHXFTHGMPSQISRCII LIDNLMSPNISAXXIMVVAVICAFXPLEKPTLVHVPLTSIWQLIIGLAYPTAQPASFVAKLTNVFHSGGNVTPWMTVVMDLMNLMTVLNL DVSQADFSVGLDSVLYQLSSVMERMIVETILMNSTVTHMSACQVNSNVPRTRNVSQXTXDVMGKMTVVMRKMKETVLKTAVLQTISSVRL RSIAFPSCGFVTRIQTVQMHQTRPTAIKRLVDLMNSSVKTTTVFPITGGVIAKMTAVIIQMKKTVSHRHVHXKISSVPMGTVFLQGFGVM EILTVQMALMREIVRQVVPKISSGVPMVSVYQQNGNVMAMKTANMGKMRKAVSQLLLLAHHVNIYVPVMDVFQHLXNVMENMIVLMVQMR WTVXLNVRKISFGAKIKPTVFQLDGCVMEFMTVWMAVMKRTVKEEEIYVELMSSFAIILSANYISGCVMERTTVETTLMKPLICVSNFFV HPRDLTDAEITEYAYSRSKCAMGLMNAVTIQMKITVVVSXHIKQGLVKRMSLLVVIKNASLWISSVIDLMTAEMVQMSKDAEXLLLNIPV KIMXIHVEMMHIVIKXKHLFSVAVSLDFRETXKTDNVKTLMNVWCLAHVPINVXMWKDHINVCVTRIFKKEITPAXQKALKIKFSTLLMT LISWVLYIHSTTVAIINKFLILNIIQEXQGWMYIIKEIXLFGVLSLIQAEFSTKGSMAEKKGKQTVAXFVLNLKGPGTLQLTGWLETFTG LIILECIGSVTTLLTGPVXGTLSTXGSXMAPTAPDSXQIWLENPMLLQXILKEGXCTGLLLGIIPIXKKQPWMVHXEGFXYKRTYRDPQV WLWIILVNAYIGLTLSSPSLAVFCMMALIQXSLSAANKVYYIHIGSISLKIIYMEQDLKMVYFEFKNLAMVQXSTXLXILIKQKVFXYLI VINNXIYPIHAWIXHANFFACXILLGPLVCVQKENIXLMAPAMMTACXMIHVSXLVKMEEDAFXMRKVIXGVTVGPVIQEKDVKSTTVAT TARMEELAYHQFXGDPPAAVHWVSLGQTVVRQSVRIFVKMEEPALXLLETSLTATASRNTPETDVSTTCATTIVXILNHVPLGMMEVLNV SVQRAMKDQNVRLTSVXGAMGGTALXIKTVKIYFATALMERLPLAVSYVMATVTMVAHASWTPRQMYLCVYAPPTGQAHSVKGQPQRAAS LIISAQEALPSLCLSSSWXLXXPPXXLVXCFVKEKEGQKQLEDNLLSMEEXMXKLAIHLITCMRXIMITTMEVFXILALXXTQQRPGTXG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_TXNL1_ENST00000217515_chr18_54305574_-_LRP1B_ENST00000389484_chr2_141299540_-_6704nt ATGGTGGGGGTGAAGCCCGTCGGGAGCGACCCGGATTTCCAGCCAGAGCTGAGCGGCGCGGGCTCCAGACTCGCCGTGGTCAAGTTCACC ATGAGAGGGTGATAGTTAAATCTGGGCCAGGGACTTTCCTCAGTTTGGCTGTTTATGACAATTATATATTCTGGTCGGACTGGGGAAGAA GAGCTATACTGCGGTCCAACAAGTACACAGGAGGAGATACAAAAATTCTTCGTTCCGATATTCCACATCAGCCAATGGGAATCATAGCTG TTGCCAATGACACCAATAGCTGTGAACTTTCTCCATGTGCATTATTGAATGGAGGCTGCCATGACTTGTGCCTTTTAACTCCCAATGGGA GAGTGAATTGTTCCTGCAGAGGGGACCGAATATTGCTAGAGGACAACAGATGTGTGACTAAAAATTCCTCCTGCAACGCTTATTCGGAGT TTGAATGTGGAAATGGTGAGTGCATTGACTACCAGCTCACCTGTGATGGCATTCCTCACTGTAAAGATAAATCAGATGAAAAACTGCTCT ACTGTGAAAACAGAAGCTGTCGAAGAGGCTTCAAGCCATGCTATAATCGCCGCTGCATTCCTCATGGCAAGTTATGTGATGGAGAAAATG ACTGCGGAGACAACTCTGATGAATTAGATTGTAAAGTTTCAACCTGTGCCACGGTTGAGTTCCGCTGTGCAGATGGGACTTGTATTCCAA GATCAGCACGATGCAACCAGAACATAGATTGTGCAGATGCTTCAGATGAAAAGAACTGCAATAACACAGACTGCACACATTTCTATAAGC TTGGAGTGAAAACCACAGGGTTCATAAGATGTAATTCTACCTCACTGTGTGTTCTGCCAACCTGGATATGCGACGGGTCTAATGACTGTG GAGACTATTCAGATGAATTAAAGTGCCCAGTTCAAAACAAACACAAATGTGAAGAAAATTATTTTAGTTGTCCTAGTGGAAGATGCATTT TGAATACCTGGATATGCGATGGTCAGAAAGATTGTGAGGATGGACGTGATGAATTCCACTGTGATTCTTCTTGCTCTTGGAACCAATTTG CTTGTTCCGCACAAAAATGTATTTCTAAGCATTGGATTTGTGATGGAGAAGATGACTGTGGGGATGGGTTAGATGAAAGTGACAGCATTT GTGGTGCCATAACCTGTGCTGCTGACATGTTCAGCTGCCAGGGCTCTCGTGCCTGCGTGCCCCGACATTGGCTTTGTGATGGTGAAAGGG ACTGTCCAGATGGAAGCGATGAGCTTTCCACAGCAGGCTGCGCTCCCAATAATACATGTGATGAAAATGCTTTCATGTGCCATAATAAAG TATGCATTCCCAAGCAATTTGTTTGTGACCATGATGACGACTGTGGAGATGGCTCTGATGAGTCACCGCAGTGTGGATATCGACAGTGTG GTACAGAAGAATTTAGTTGTGCTGATGGGCGGTGTCTTCTAAATACTCAATGGCAGTGTGATGGAGACTTTGACTGTCCTGACCATTCTG ATGAAGCACCTTTAAACCCAAAGTGTAAAAGTGCAGAACAGTCATGCAACAGTTCATTTTTTATGTGCAAAAATGGCAGGTGCATTCCCA GTGGAGGTCTTTGCGACAATAAGGATGACTGTGGCGATGGTTCAGATGAGAGAAACTGCCATATAAATGAATGTTTGAGTAAGAAAGTCA GTGGATGTTCTCAAGACTGTCAAGACCTTCCGGTCAGTTATAAGTGCAAATGCTGGCCTGGATTCCAACTGAAGGATGACGGCAAAACAT GTGTAGACATTGATGAATGCTCTTCAGGCTTTCCCTGTAGCCAGCAATGCATCAATACATACGGGACTTACAAGTGCCTCTGTACAGATG GGTATGAAATACAACCTGATAACCCAAATGGCTGCAAATCGCTCTCAGATGAAGAACCTTTTTTAATTCTTGCTGATCATCATGAGATAA GGAAAATTAGCACTGATGGCTCCAACTACACACTTTTAAAACAGGGATTAAACAATGTTATTGCTATAGACTTTGATTACAGAGAAGAAT TCATCTATTGGATCGATTCTAGCCGACCCAATGGCAGTCGCATAAATAGAATGTGTTTAAATGGAAGTGACATTAAGGTAGTTCATAACA CAGCGGTCCCCAATGCACTTGCTGTCGATTGGATTGGAAAAAACCTCTATTGGTCTGACACAGAAAAAAGAATCATTGAAGTATCCAAAC TCAATGGCTTGTACCCTACTATACTCGTTAGCAAAAGGCTGAAGTTTCCCAGAGACTTGTCTTTAGATCCTCAAGCTGGATATTTGTATT GGATTGACTGCTGCGAGTATCCTCATATTGGCCGTGTTGGAATGGATGGAACCAATCAGAGTGTTGTCATAGAAACCAAGATTTCTAGAC CTATGGCACTAACAATAGATTATGTTAATCGTAGACTCTACTGGGCCGATGAAAATCACATTGAATTTAGCAACATGGATGGATCTCATA GACACAAAGTCCCTAATCAAGATATTCCAGGGGTGATTGCACTAACATTGTTTGAAGACTACATCTACTGGACTGATGGGAAAACCAAGT CACTCAGCCGTGCCCATAAAACATCGGGAGCAGACAGACTCTCACTGATTTACTCATGGCATGCCATCACAGATATCCAGGTGTATCATT CTTATAGACAACCTGATGTCTCCAAACATCTCTGCATGATAAATAATGGTGGTTGCAGTCATTTGTGCCTTTTAGCCCCTGGAAAAACCC ACACTTGTGCATGTCCCACTAACTTCTATCTGGCAGCTGATAATAGGACTTGCTTATCCAACTGCACAGCCAGCCAGTTTCGTTGCAAAA CTGACAAATGTATTCCATTCTGGTGGAAATGTGACACCGTGGATGACTGTGGTGATGGATCTGATGAACCTGATGACTGTCCTGAATTTA GATGTCAGCCAGGCCGATTTCAGTGTGGGACTGGACTCTGTGCTCTACCAGCTTTCATCTGTGATGGAGAGAATGATTGTGGAGACAATT CTGATGAACTCAACTGTGACACACATGTCTGCCTGTCAGGTCAATTCAAATGTACCAAGAACCAGAAATGTATCCCAGTAAACTTAAGAT GTAATGGGCAAGATGACTGTGGTGATGAGGAAGATGAAAGAGACTGTCCTGAAAACAGCTGTTCTCCAGACTATTTCCAGTGTAAGACTA CGAAGCATTGCATTTCCAAGCTGTGGGTTTGTGACGAGGATCCAGACTGTGCAGATGCATCAGACGAGGCCAACTGCGATAAAAAGACTT GTGGACCTCATGAATTCCAGTGTAAAAACAACAACTGTATTCCCGATCACTGGCGGTGTGATAGCCAAAATGACTGCAGTGATAATTCAG ATGAAGAAAACTGTAAGCCACAGACATGTACATTGAAAGATTTCCTCTGTGCCAATGGGGACTGTGTTTCTTCAAGGTTTTGGTGTGATG GAGATTTTGACTGTGCAGATGGCTCTGATGAGAGAAATTGTGAGACAAGTTGTTCCAAAGATCAGTTCCGGTGTTCCAATGGTCAGTGTA TACCAGCAAAATGGAAATGTGATGGCCATGAAGACTGCAAATATGGGGAAGATGAGAAAAGCTGTGAGCCAGCTTCTCCTACTTGCTCAT CACGTGAATATATATGTGCCAGTGATGGATGTATTTCAGCATCTTTGAAATGTAATGGAGAATATGATTGTGCTGATGGTTCAGATGAGA TGGACTGTGTGACTGAATGTAAGGAAGATCAGTTTCGGTGCAAAAATAAAGCCCACTGTATTCCAATTAGATGGCTGTGTGATGGAATTC ATGACTGTGTGGATGGCAGTGATGAAGAGAACTGTGAAAGAGGAGGAAATATATGTAGAGCTGATGAGTTCCTTTGCAATAATTCTCTCT GCAAACTACATTTCTGGGTGTGTGATGGAGAGGACGACTGTGGAGACAACTCTGATGAAGCCCCTGATATGTGTGTCAAATTTCTTTGTC CATCCACGAGACCTCACAGATGCAGAAATAACAGAATATGCCTACAGTCGGAGCAAATGTGCAATGGGATTGATGAATGCGGTGACAATT CAGATGAAGATCACTGTGGTGGTAAGCTGACATATAAAGCAAGGCCTTGTAAAAAGGATGAGTTTGCTTGTAGTAATAAAAAATGCATCC CTATGGATCTCCAGTGTGATCGACTTGATGACTGCGGAGATGGTTCAGATGAGCAAGGATGCAGAATAGCTCCTACTGAATATACCTGTG AAGATAATGTGAATCCATGTGGAGATGATGCATATTGTAATCAAATAAAAACATCTGTTTTCTGTCGCTGTAAGCCTGGATTTCAGAGAA ACATGAAAAACAGACAATGTGAAGACCTTAATGAATGTTTGGTGTTTGGCACATGTTCCCATCAATGTATAAATGTGGAAGGATCATATA AATGTGTGTGTGACCAGAATTTTCAAGAAAGAAATAACACCTGCATAGCAGAAGGCTCTGAAGATCAAGTTCTCTACATTGCTAATGACA CTGATATCCTGGGTTTTATATATCCATTCAACTACAGTGGCGATCATCAACAAATTTCTCATATTGAACATAATTCAAGAATAACAGGGA TGGATGTATATTATCAAAGAGATATGATTATTTGGAGTACTCAGTTTAATCCAGGCGGAATTTTCTACAAAAGGATCCATGGCAGAGAAA AAAGGCAAGCAAACAGTGGCTTGATTTGTCCTGAATTTAAAAGGCCCAGGGACATTGCAGTTGACTGGGTGGCTGGAAACATTTACTGGA CTGATCATTCTAGAATGCATTGGTTCAGTTACTACACTACTCACTGGACCAGTCTGAGGTACTCTATCAACGTAGGGCAGCTGAATGGCC CCAACTGCACCAGACTCTTAACAAATATGGCTGGAGAACCCTATGCTATTGCAGTAAATCCTAAAAGAGGGATGATGTACTGGACTGTTG TTGGGGATCATTCCCATATAGAAGAAGCAGCCATGGATGGTACACTGAGAAGGATTTTAGTACAAAAGAACTTACAGAGACCCACAGGTT TGGCTGTGGATTATTTTAGTGAACGCATATATTGGGCTGACTTTGAGCTCTCCATCATTGGCAGTGTTCTGTATGATGGCTCTAATTCAG TAGTCTCTGTCAGCAGCAAACAAGGTTTATTACATCCACATAGGATCGATATCTTTGAAGATTATATATATGGAGCAGGACCTAAAAATG GTGTATTTCGAGTTCAAAAATTTGGCCATGGTTCAGTAGAGTACTTAGCTTTAAATATTGATAAAACAAAAGGTGTTTTGATATCTCATC GTTATAAACAACTAGATTTACCCAATCCATGCTTGGATTTAGCATGCGAATTTCTTTGCTTGCTAAATCCTTCTGGGGCCACTTGTGTGT GTCCAGAAGGAAAATATTTGATTAATGGCACCTGCAATGATGACAGCCTGTTAGATGATTCATGTAAGTTAACTTGTGAAAATGGAGGAA GATGCATTTTAAATGAGAAAGGTGATTTGAGGTGTCACTGTTGGCCCAGTTATTCAGGAGAAAGATGTGAAGTCAACCACTGTAGCAACT ACTGCCAGAATGGAGGAACTTGCGTACCATCAGTTCTAGGGAGACCCACCTGCAGCTGTGCACTGGGTTTCACTGGGCCAAACTGTGGTA AGACAGTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTGCATTGTGACTGCTGGAAACCAGCCTTACTGCCACTGCCAGCCGGAATACA CCGGAGACAGATGTCAGTACTACGTGTGCCACCACTATTGTGTGAATTCTGAATCATGTACCATTGGGGATGATGGAAGTGTTGAATGTG TCTGTCCAACGCGCTATGAAGGACCAAAATGTGAGGTTGACAAGTGTGTAAGGTGCCATGGGGGGCACTGCATTATAAATAAAGACAGTG AAGATATATTTTGCAACTGCACTAATGGAAAGATTGCCTCTAGCTGTCAGTTATGTGATGGCTACTGTTACAATGGTGGCACATGCCAGC TGGACCCCGAGACAAATGTACCTGTGTGTCTATGCTCCACCAACTGGTCAGGCACACAGTGTGAAAGGCCAGCCCCAAAGAGCAGCAAGT CTGATCATATCAGCACAAGAAGCATTGCCATCATTGTGCCTCTCGTCCTCTTGGTGACTTTGATAACCACCTTAGTAATTGGTTTAGTGC TTTGTAAAAGAAAAAGAAGGACAAAAACAATTAGAAGACAACCTATTATCAATGGAGGAATAAATGTAGAAATTGGCAATCCATCTTATA ACATGTATGAGGTAGATCATGATCACAACGATGGAGGTCTTTTAGATCCTGGCTTTATGATAGACCCAACAAAGGCCAGGTACATAGGGG GAGGACCCAGTGCTTTCAAGCTTCCACACACAGCGCCGCCCATCTACCTAAACTCTGATTTGAAAGGACCACTAACTGCTGGGCCAACAA ATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAAACTGTCGAAACTCCTTAGGAAGTGTTGATGAAAGGAAAGAACTGC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_TXNL1_ENST00000217515_chr18_54305574_-_LRP1B_ENST00000389484_chr2_141299540_-_8672nt TCCCCCATCCCTCCCCGCCCCCTCGGCCGCTCCGCTCCCTGGCGTGACTCGGCACTGAGAGTCCCGGGAGAAGACTCGGCGGTCGCCACC TCTTCTGTCCAGGCCTCGGCCTTCCTGAGCATCTCTCCTTCCTCTCCCAGATCGTCTTCTCCTTCAGTTTCAAAGCCAGTGGCGTCGCGG CCACCCTGCCGGGCTCTCTGTGAGGATGGTGGGGGTGAAGCCCGTCGGGAGCGACCCGGATTTCCAGCCAGAGCTGAGCGGCGCGGGCTC CAGACTCGCCGTGGTCAAGTTCACCATGAGAGGGTGATAGTTAAATCTGGGCCAGGGACTTTCCTCAGTTTGGCTGTTTATGACAATTAT ATATTCTGGTCGGACTGGGGAAGAAGAGCTATACTGCGGTCCAACAAGTACACAGGAGGAGATACAAAAATTCTTCGTTCCGATATTCCA CATCAGCCAATGGGAATCATAGCTGTTGCCAATGACACCAATAGCTGTGAACTTTCTCCATGTGCATTATTGAATGGAGGCTGCCATGAC TTGTGCCTTTTAACTCCCAATGGGAGAGTGAATTGTTCCTGCAGAGGGGACCGAATATTGCTAGAGGACAACAGATGTGTGACTAAAAAT TCCTCCTGCAACGCTTATTCGGAGTTTGAATGTGGAAATGGTGAGTGCATTGACTACCAGCTCACCTGTGATGGCATTCCTCACTGTAAA GATAAATCAGATGAAAAACTGCTCTACTGTGAAAACAGAAGCTGTCGAAGAGGCTTCAAGCCATGCTATAATCGCCGCTGCATTCCTCAT GGCAAGTTATGTGATGGAGAAAATGACTGCGGAGACAACTCTGATGAATTAGATTGTAAAGTTTCAACCTGTGCCACGGTTGAGTTCCGC TGTGCAGATGGGACTTGTATTCCAAGATCAGCACGATGCAACCAGAACATAGATTGTGCAGATGCTTCAGATGAAAAGAACTGCAATAAC ACAGACTGCACACATTTCTATAAGCTTGGAGTGAAAACCACAGGGTTCATAAGATGTAATTCTACCTCACTGTGTGTTCTGCCAACCTGG ATATGCGACGGGTCTAATGACTGTGGAGACTATTCAGATGAATTAAAGTGCCCAGTTCAAAACAAACACAAATGTGAAGAAAATTATTTT AGTTGTCCTAGTGGAAGATGCATTTTGAATACCTGGATATGCGATGGTCAGAAAGATTGTGAGGATGGACGTGATGAATTCCACTGTGAT TCTTCTTGCTCTTGGAACCAATTTGCTTGTTCCGCACAAAAATGTATTTCTAAGCATTGGATTTGTGATGGAGAAGATGACTGTGGGGAT GGGTTAGATGAAAGTGACAGCATTTGTGGTGCCATAACCTGTGCTGCTGACATGTTCAGCTGCCAGGGCTCTCGTGCCTGCGTGCCCCGA CATTGGCTTTGTGATGGTGAAAGGGACTGTCCAGATGGAAGCGATGAGCTTTCCACAGCAGGCTGCGCTCCCAATAATACATGTGATGAA AATGCTTTCATGTGCCATAATAAAGTATGCATTCCCAAGCAATTTGTTTGTGACCATGATGACGACTGTGGAGATGGCTCTGATGAGTCA CCGCAGTGTGGATATCGACAGTGTGGTACAGAAGAATTTAGTTGTGCTGATGGGCGGTGTCTTCTAAATACTCAATGGCAGTGTGATGGA GACTTTGACTGTCCTGACCATTCTGATGAAGCACCTTTAAACCCAAAGTGTAAAAGTGCAGAACAGTCATGCAACAGTTCATTTTTTATG TGCAAAAATGGCAGGTGCATTCCCAGTGGAGGTCTTTGCGACAATAAGGATGACTGTGGCGATGGTTCAGATGAGAGAAACTGCCATATA AATGAATGTTTGAGTAAGAAAGTCAGTGGATGTTCTCAAGACTGTCAAGACCTTCCGGTCAGTTATAAGTGCAAATGCTGGCCTGGATTC CAACTGAAGGATGACGGCAAAACATGTGTAGACATTGATGAATGCTCTTCAGGCTTTCCCTGTAGCCAGCAATGCATCAATACATACGGG ACTTACAAGTGCCTCTGTACAGATGGGTATGAAATACAACCTGATAACCCAAATGGCTGCAAATCGCTCTCAGATGAAGAACCTTTTTTA ATTCTTGCTGATCATCATGAGATAAGGAAAATTAGCACTGATGGCTCCAACTACACACTTTTAAAACAGGGATTAAACAATGTTATTGCT ATAGACTTTGATTACAGAGAAGAATTCATCTATTGGATCGATTCTAGCCGACCCAATGGCAGTCGCATAAATAGAATGTGTTTAAATGGA AGTGACATTAAGGTAGTTCATAACACAGCGGTCCCCAATGCACTTGCTGTCGATTGGATTGGAAAAAACCTCTATTGGTCTGACACAGAA AAAAGAATCATTGAAGTATCCAAACTCAATGGCTTGTACCCTACTATACTCGTTAGCAAAAGGCTGAAGTTTCCCAGAGACTTGTCTTTA GATCCTCAAGCTGGATATTTGTATTGGATTGACTGCTGCGAGTATCCTCATATTGGCCGTGTTGGAATGGATGGAACCAATCAGAGTGTT GTCATAGAAACCAAGATTTCTAGACCTATGGCACTAACAATAGATTATGTTAATCGTAGACTCTACTGGGCCGATGAAAATCACATTGAA TTTAGCAACATGGATGGATCTCATAGACACAAAGTCCCTAATCAAGATATTCCAGGGGTGATTGCACTAACATTGTTTGAAGACTACATC TACTGGACTGATGGGAAAACCAAGTCACTCAGCCGTGCCCATAAAACATCGGGAGCAGACAGACTCTCACTGATTTACTCATGGCATGCC ATCACAGATATCCAGGTGTATCATTCTTATAGACAACCTGATGTCTCCAAACATCTCTGCATGATAAATAATGGTGGTTGCAGTCATTTG TGCCTTTTAGCCCCTGGAAAAACCCACACTTGTGCATGTCCCACTAACTTCTATCTGGCAGCTGATAATAGGACTTGCTTATCCAACTGC ACAGCCAGCCAGTTTCGTTGCAAAACTGACAAATGTATTCCATTCTGGTGGAAATGTGACACCGTGGATGACTGTGGTGATGGATCTGAT GAACCTGATGACTGTCCTGAATTTAGATGTCAGCCAGGCCGATTTCAGTGTGGGACTGGACTCTGTGCTCTACCAGCTTTCATCTGTGAT GGAGAGAATGATTGTGGAGACAATTCTGATGAACTCAACTGTGACACACATGTCTGCCTGTCAGGTCAATTCAAATGTACCAAGAACCAG AAATGTATCCCAGTAAACTTAAGATGTAATGGGCAAGATGACTGTGGTGATGAGGAAGATGAAAGAGACTGTCCTGAAAACAGCTGTTCT CCAGACTATTTCCAGTGTAAGACTACGAAGCATTGCATTTCCAAGCTGTGGGTTTGTGACGAGGATCCAGACTGTGCAGATGCATCAGAC GAGGCCAACTGCGATAAAAAGACTTGTGGACCTCATGAATTCCAGTGTAAAAACAACAACTGTATTCCCGATCACTGGCGGTGTGATAGC CAAAATGACTGCAGTGATAATTCAGATGAAGAAAACTGTAAGCCACAGACATGTACATTGAAAGATTTCCTCTGTGCCAATGGGGACTGT GTTTCTTCAAGGTTTTGGTGTGATGGAGATTTTGACTGTGCAGATGGCTCTGATGAGAGAAATTGTGAGACAAGTTGTTCCAAAGATCAG TTCCGGTGTTCCAATGGTCAGTGTATACCAGCAAAATGGAAATGTGATGGCCATGAAGACTGCAAATATGGGGAAGATGAGAAAAGCTGT GAGCCAGCTTCTCCTACTTGCTCATCACGTGAATATATATGTGCCAGTGATGGATGTATTTCAGCATCTTTGAAATGTAATGGAGAATAT GATTGTGCTGATGGTTCAGATGAGATGGACTGTGTGACTGAATGTAAGGAAGATCAGTTTCGGTGCAAAAATAAAGCCCACTGTATTCCA ATTAGATGGCTGTGTGATGGAATTCATGACTGTGTGGATGGCAGTGATGAAGAGAACTGTGAAAGAGGAGGAAATATATGTAGAGCTGAT GAGTTCCTTTGCAATAATTCTCTCTGCAAACTACATTTCTGGGTGTGTGATGGAGAGGACGACTGTGGAGACAACTCTGATGAAGCCCCT GATATGTGTGTCAAATTTCTTTGTCCATCCACGAGACCTCACAGATGCAGAAATAACAGAATATGCCTACAGTCGGAGCAAATGTGCAAT GGGATTGATGAATGCGGTGACAATTCAGATGAAGATCACTGTGGTGGTAAGCTGACATATAAAGCAAGGCCTTGTAAAAAGGATGAGTTT GCTTGTAGTAATAAAAAATGCATCCCTATGGATCTCCAGTGTGATCGACTTGATGACTGCGGAGATGGTTCAGATGAGCAAGGATGCAGA ATAGCTCCTACTGAATATACCTGTGAAGATAATGTGAATCCATGTGGAGATGATGCATATTGTAATCAAATAAAAACATCTGTTTTCTGT CGCTGTAAGCCTGGATTTCAGAGAAACATGAAAAACAGACAATGTGAAGACCTTAATGAATGTTTGGTGTTTGGCACATGTTCCCATCAA TGTATAAATGTGGAAGGATCATATAAATGTGTGTGTGACCAGAATTTTCAAGAAAGAAATAACACCTGCATAGCAGAAGGCTCTGAAGAT CAAGTTCTCTACATTGCTAATGACACTGATATCCTGGGTTTTATATATCCATTCAACTACAGTGGCGATCATCAACAAATTTCTCATATT GAACATAATTCAAGAATAACAGGGATGGATGTATATTATCAAAGAGATATGATTATTTGGAGTACTCAGTTTAATCCAGGCGGAATTTTC TACAAAAGGATCCATGGCAGAGAAAAAAGGCAAGCAAACAGTGGCTTGATTTGTCCTGAATTTAAAAGGCCCAGGGACATTGCAGTTGAC TGGGTGGCTGGAAACATTTACTGGACTGATCATTCTAGAATGCATTGGTTCAGTTACTACACTACTCACTGGACCAGTCTGAGGTACTCT ATCAACGTAGGGCAGCTGAATGGCCCCAACTGCACCAGACTCTTAACAAATATGGCTGGAGAACCCTATGCTATTGCAGTAAATCCTAAA AGAGGGATGATGTACTGGACTGTTGTTGGGGATCATTCCCATATAGAAGAAGCAGCCATGGATGGTACACTGAGAAGGATTTTAGTACAA AAGAACTTACAGAGACCCACAGGTTTGGCTGTGGATTATTTTAGTGAACGCATATATTGGGCTGACTTTGAGCTCTCCATCATTGGCAGT GTTCTGTATGATGGCTCTAATTCAGTAGTCTCTGTCAGCAGCAAACAAGGTTTATTACATCCACATAGGATCGATATCTTTGAAGATTAT ATATATGGAGCAGGACCTAAAAATGGTGTATTTCGAGTTCAAAAATTTGGCCATGGTTCAGTAGAGTACTTAGCTTTAAATATTGATAAA ACAAAAGGTGTTTTGATATCTCATCGTTATAAACAACTAGATTTACCCAATCCATGCTTGGATTTAGCATGCGAATTTCTTTGCTTGCTA AATCCTTCTGGGGCCACTTGTGTGTGTCCAGAAGGAAAATATTTGATTAATGGCACCTGCAATGATGACAGCCTGTTAGATGATTCATGT AAGTTAACTTGTGAAAATGGAGGAAGATGCATTTTAAATGAGAAAGGTGATTTGAGGTGTCACTGTTGGCCCAGTTATTCAGGAGAAAGA TGTGAAGTCAACCACTGTAGCAACTACTGCCAGAATGGAGGAACTTGCGTACCATCAGTTCTAGGGAGACCCACCTGCAGCTGTGCACTG GGTTTCACTGGGCCAAACTGTGGTAAGACAGTCTGTGAGGATTTTTGTCAAAATGGAGGAACCTGCATTGTGACTGCTGGAAACCAGCCT TACTGCCACTGCCAGCCGGAATACACCGGAGACAGATGTCAGTACTACGTGTGCCACCACTATTGTGTGAATTCTGAATCATGTACCATT GGGGATGATGGAAGTGTTGAATGTGTCTGTCCAACGCGCTATGAAGGACCAAAATGTGAGGTTGACAAGTGTGTAAGGTGCCATGGGGGG CACTGCATTATAAATAAAGACAGTGAAGATATATTTTGCAACTGCACTAATGGAAAGATTGCCTCTAGCTGTCAGTTATGTGATGGCTAC TGTTACAATGGTGGCACATGCCAGCTGGACCCCGAGACAAATGTACCTGTGTGTCTATGCTCCACCAACTGGTCAGGCACACAGTGTGAA AGGCCAGCCCCAAAGAGCAGCAAGTCTGATCATATCAGCACAAGAAGCATTGCCATCATTGTGCCTCTCGTCCTCTTGGTGACTTTGATA ACCACCTTAGTAATTGGTTTAGTGCTTTGTAAAAGAAAAAGAAGGACAAAAACAATTAGAAGACAACCTATTATCAATGGAGGAATAAAT GTAGAAATTGGCAATCCATCTTATAACATGTATGAGGTAGATCATGATCACAACGATGGAGGTCTTTTAGATCCTGGCTTTATGATAGAC CCAACAAAGGCCAGGTACATAGGGGGAGGACCCAGTGCTTTCAAGCTTCCACACACAGCGCCGCCCATCTACCTAAACTCTGATTTGAAA GGACCACTAACTGCTGGGCCAACAAATTACTCCAATCCGGTATATGCAAAATTATATATGGATGGGCAAAACTGTCGAAACTCCTTAGGA AGTGTTGATGAAAGGAAAGAACTGCTTCCAAAGAAAATAGAAATTGGTATAAGAGAGACAGTGGCATAATCAGTGATATCTTTTATATGC TGTATAAATGTATAAAATATAAGGATTACTTTTGTATGTTCCAACAGTATTATACTTGTTTTGGCATCAGCATTACCTCTTTCTTTATCT TTTTCCTGGTTAATTGTTTTCTGAGTTTTTTGGGTTTTATTTTTTGCTGATGACTATTGATTGACCATTTGTATGGTATTTTTATGAAAA AGAACTGCACTACAGTACAATTTACAACAATGCTGCTGATATGACACACCTTTGAATTTGTTAAAATTAAAAACAACGTATTCCTTTGTA GTGTGAATATGAGCAATCTATTTTATATGAACTTTTTTGGTTGTACTTAATCAACGAGGAGAATCTCTGCACTTTTCCATTATACGGTTT GAAGGCTGTAATACAGTGTCATATTATTTTTCTGTTTAAATTGATGGAAAAATGATTGAATGGTCAACTCTCTTCTTTGTGCCCATAAAG ATCGATTCAGACTCTGCTGAAAATATATAGCTCTCACAAGTTCAGCATCACCTGCTTTGAAATTAGCCTTAGATTGCCAACCAATAGATG AGAATTTTGAGGAAAAAAATTAAAAATATGTAAAATTAATAATTTGCATGAACACAGATGACTACATTTTCCAAAACTTAGTGGACTCTA TGTGATGTACTAAATGTATACACCTTGTAAGCAATAGTTATATTTAGGTGGTAGAACATAGCAAAAATATAACCGAAAGTTGGCCGACTG CACTTGCTATGGAATAAGACCTTTTATTCTCCCTCAGTCTCGAGATAAATAGCCAGCCTAGAGCACAACAGGGCATTGGGTACTTGCATC TTAGGTATTTCTTCCCAGTCACATCCATTTTGTGGAAGATTAACCCAACCCCTTACACTACACTGAACACTAAAGAATAATATATAAGCA CACAAATTGGTGACAGAATTTCAATTACGTGAACGCATCCTCTTTGCTAGGTCAAAAAACAAAGGGCAAAGCAGACATTTTAGTATACAG AGTGATTGGCAAATATTTTCAAGATTTAATATGAGCAACCCATTATTTGCCCTATCCAAAATATATTCAAGGGCCTTCCAAGTTGTAGAA GAACAATGATCTTCCCATAATCAAAAGTGGAGAGTCGAAATGCTGTGCCAGTTGCTCTGGTATTCAGGTTTCTCTGGGTTTTACAGAACG CATGGACCCCATTCACGTTTGGTTTGTTTATCTTCAAATTTGAGTTGAAACGAGTGCGATTTATTTAAGTTGTATATAAAAATAAAAGGA TAGCATTTTTATACAAATATCTTTAAAGGCACAAAAGATTTATTCACAAGTTTTGGAGGGCTTTTTGTTCCTCTGATAGACATGACTGAC TTTTAGCTGTCATAATGTATTAACCTAACAGATGAAATATGTTAAATATGTGGTTGCTCTTTATCCCTTTGTACAAGCATTAAAAAAACT GCTGTTTTATAAGAAGACTTTTTGTTGTACTATGTGCATGCATACTACCTATTTCTAAACTTTGCCATATTGAGGCCTTTATAAACTATT GATTTATGTAATACTAGTGCAATTTTGCTTGAACAATGTTATGCATATCATAAACTTTTTCAGGTTCTTGTTTAAGTACATTTTTTAAAT TGAACAGTATTTTTCATTTTGGTTATAATATAGTCATTTTGCCTATGTTTCTACAATGAAGTGTTAAATACTTTATAAAAAATTGTTGAC |
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FusionGenePPI for TXNL1_LRP1B |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
TXNL1 | UCHL5, USP14, UBC, SH3BP4, PSMA6, PSMD14, RAD23A, PSMA1, PSMD7, PSMD4, PSMC3, EEF1A1, UBE3A, DDX39B, USP5, ATP6V1A, TXNDC17, VCL, USP7, XPOT, URM1, UBE2H, LACTB2, USP16, PDIA6, MINA, P4HB, CCT5, CSE1L, CCT2, CCT4, ADRM1, FLNB, NCAPD2, PSMC1, PSMC2, PSMC6, PSMD12, PSMD1, PSMD3, PSMD8, SQSTM1, KIAA0368, FLNC, KCMF1, PPP1R2P4, PSMD13, PSMD2, SHFM1, HSPB1, UNK, CORO1B, DHX9, LSM7, SFN, DNAJC10, NTRK1, BTRC, TXNIP | LRP1B | ARRB1, CUL4B, TAZ, RSPO1, SFRP4, PTPRK, FOXD4L6, ZFP41, EWSR1, LRPAP1, ZNF408, ZNF224, ZNF331, FAM19A3, ZNF563, ZNF517, ZNF169, SCGB1D1, DNAJC10, CHRDL1, OLFM3, EGFL6, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TXNL1_LRP1B |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TXNL1_LRP1B |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | LRP1B | C0007134 | Renal Cell Carcinoma | 1 | CTD_human |
Tgene | LRP1B | C0025202 | melanoma | 1 | CTD_human |