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Fusion gene ID: 39367 |
FusionGeneSummary for TRAK2_AP1S3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: TRAK2_AP1S3 | Fusion gene ID: 39367 | Hgene | Tgene | Gene symbol | TRAK2 | AP1S3 | Gene ID | 66008 | 130340 |
| Gene name | trafficking kinesin protein 2 | adaptor related protein complex 1 subunit sigma 3 | |
| Synonyms | ALS2CR3|CALS-C|GRIF-1|GRIF1|MILT2|OIP98 | PSORS15 | |
| Cytomap | 2q33.1 | 2q36.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | trafficking kinesin-binding protein 2O-linked N-acetylglucosamine transferase interacting protein 98amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 3amyotrophic lateral sclerosis 2 chromosomal region candidate gene 3 proteingam | AP-1 complex subunit sigma-3adapter-related protein complex 1 subunit sigma-1Cadaptor protein complex AP-1 sigma-1C subunitadaptor related protein complex 1 sigma 3 subunitadaptor-related protein complex 1 subunit sigma-1Cclathrin assembly protein co | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | O60296 | Q96PC3 | |
| Ensembl transtripts involved in fusion gene | ENST00000332624, ENST00000430254, ENST00000451703, | ENST00000443700, ENST00000396654, ENST00000396653, ENST00000446015, ENST00000409375, ENST00000423110, | |
| Fusion gene scores | * DoF score | 5 X 4 X 3=60 | 1 X 1 X 1=1 |
| # samples | 5 | 1 | |
| ** MAII score | log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
| Context | PubMed: TRAK2 [Title/Abstract] AND AP1S3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | SARC | TCGA-DX-AATS-01A | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000332624 | ENST00000443700 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000332624 | ENST00000396654 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000332624 | ENST00000396653 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000332624 | ENST00000446015 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000332624 | ENST00000409375 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000332624 | ENST00000423110 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000430254 | ENST00000443700 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000430254 | ENST00000396654 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000430254 | ENST00000396653 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000430254 | ENST00000446015 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000430254 | ENST00000409375 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| In-frame | ENST00000430254 | ENST00000423110 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| 5UTR-3CDS | ENST00000451703 | ENST00000443700 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| 5UTR-3CDS | ENST00000451703 | ENST00000396654 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| 5UTR-3CDS | ENST00000451703 | ENST00000396653 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| 5UTR-3CDS | ENST00000451703 | ENST00000446015 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| 5UTR-3CDS | ENST00000451703 | ENST00000409375 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
| 5UTR-3CDS | ENST00000451703 | ENST00000423110 | TRAK2 | chr2 | 202285140 | - | AP1S3 | chr2 | 224642586 | - |
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FusionProtFeatures for TRAK2_AP1S3 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| TRAK2 | AP1S3 |
| May regulate endosome-to-lysosome trafficking ofmembrane cargo, including EGFR. {ECO:0000250}. | Subunit of clathrin-associated adaptor protein complex 1that plays a role in protein sorting in the late-Golgi/trans-Golginetwork (TGN) and/or endosomes. The AP complexes mediate both therecruitment of clathrin to membranes and the recognition ofsorting signals within the cytosolic tails of transmembrane cargomolecules. Involved in TLR3 trafficking (PubMed:24791904).{ECO:0000269|PubMed:24791904}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >TRAK2 | chr2:202285140 | chr2:224642586 | ENST00000332624 | - | 2 | 16 | 134_354 | 30 | 915 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >TRAK2 | chr2:202285140 | chr2:224642586 | ENST00000430254 | - | 2 | 8 | 134_354 | 30 | 312 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >TRAK2 | chr2:202285140 | chr2:224642586 | ENST00000332624 | - | 2 | 16 | 48_353 | 30 | 915 | Domain | Note=HAP1 N-terminal |
| Hgene | >TRAK2 | chr2:202285140 | chr2:224642586 | ENST00000430254 | - | 2 | 8 | 48_353 | 30 | 312 | Domain | Note=HAP1 N-terminal |
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FusionGeneSequence for TRAK2_AP1S3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000443700_chr2_224642586_-_194aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK VCXFIFLLCNRKSGQXALDARDCASLRGAAGQIFWKCLXAGYYLXFXKGLFHPGRVYNRWGNSGNIQENCCQSHXRLXYVTGESFEPQRQ >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000396654_chr2_224642586_-_184aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK VCXFIFLLCNRKSGQXALDARDCASLRGAAGQIFWKCLXAGYYLXFXKGLFHPGRVYNRWGNSGNIQENCCQSHXRLXYVTGDNGRIHEQ >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000396653_chr2_224642586_-_93aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000446015_chr2_224642586_-_184aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK VCXFIFLLCNRKSGQXALDARDCASLRGAAGQIFWKCLXAGYYLXFXKGLFHPGRVYNRWGNSGNIQENCCQSHXRLXYVTGGQYGFPNH >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000409375_chr2_224642586_-_30aa >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000423110_chr2_224642586_-_134aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000443700_chr2_224642586_-_194aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK VCXFIFLLCNRKSGQXALDARDCASLRGAAGQIFWKCLXAGYYLXFXKGLFHPGRVYNRWGNSGNIQENCCQSHXRLXYVTGESFEPQRQ >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000396654_chr2_224642586_-_184aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK VCXFIFLLCNRKSGQXALDARDCASLRGAAGQIFWKCLXAGYYLXFXKGLFHPGRVYNRWGNSGNIQENCCQSHXRLXYVTGDNGRIHEQ >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000396653_chr2_224642586_-_93aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000446015_chr2_224642586_-_184aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK VCXFIFLLCNRKSGQXALDARDCASLRGAAGQIFWKCLXAGYYLXFXKGLFHPGRVYNRWGNSGNIQENCCQSHXRLXYVTGGQYGFPNH >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000409375_chr2_224642586_-_30aa >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000423110_chr2_224642586_-_134aa MSQSQNAIFTSPTGEENLMNSNHRDSESITDTFHIALQSTREITATEMVHHSPXXREEEDHPGNCSDYSLPWSQDKQFCXLEGAKTCLXK |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000443700_chr2_224642586_-_583nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT GGACAAATATTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGG GGAAATTCAGGAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGAATCGTTTGAGCCCCAGAGGCAG >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000396654_chr2_224642586_-_553nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT GGACAAATATTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGG GGAAATTCAGGAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGACAATGGAAGAATACATGAACAA >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000396653_chr2_224642586_-_280nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000446015_chr2_224642586_-_553nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT GGACAAATATTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGG GGAAATTCAGGAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGGTCAGTACGGTTTCCCAAACCAT >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000409375_chr2_224642586_-_91nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000423110_chr2_224642586_-_403nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000443700_chr2_224642586_-_583nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT GGACAAATATTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGG GGAAATTCAGGAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGAATCGTTTGAGCCCCAGAGGCAG >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000396654_chr2_224642586_-_553nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT GGACAAATATTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGG GGAAATTCAGGAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGACAATGGAAGAATACATGAACAA >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000396653_chr2_224642586_-_280nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000446015_chr2_224642586_-_553nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT GGACAAATATTTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGG GGAAATTCAGGAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGGTCAGTACGGTTTCCCAAACCAT >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000409375_chr2_224642586_-_91nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000423110_chr2_224642586_-_403nt ATGAGTCAATCCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACT GATACATTTCATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGAT CACCCGGGAAATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAG GTATGCTAGTTTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000443700_chr2_224642586_-_2150nt CCTTTGGCTTCCCCAATTGTGTGGGGGCTGCCATTGACCCGGTGTCGCCGCAGAACCGAGGTCGCCGAGTGATGATGTTGTGAAGTCGCC CGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCCGCTGCATTAGG GGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCACATGAGAGTGCT CGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATTATTGAATGGCT TGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAATCCCAGAATGCA ATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTCATATTGCTCTT CAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAAATTGTTCAGAT TATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGTTTATATTTTTG CTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATATTTTGGAAATGT CTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAGGAAACATCCAA GAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGAATCGTTTGAGCCCCAGAGGCAGAGATTGCAGTGAGCCGAGATC ATGCCATTGCACTCTAGCCTAGGCAACAAGAGCAAAACTCCATCTAAAAAAAAAAAAAAAGAAAAGAAAAAGGAGAATTATGAAGAACTT GGTTCCACAAGTAAGATAGTCCTCATACTGCATCAGTAGTGACTTAAACTTTTTTAAAACTTTTATTTTTTGTGGGGGGATCTGTTGAAT TTGGGAAGCCTCCAGTTTTAATAAAATTTTTTTATTATGGTGGAAACATGTCTGTAAAACTTAGGACTATAGAAATGCAAAGAATAAAGA ACTGAGGGAGTTACACACATTTGTAGTCAGAAATTAAGTTCAAAAAATAATTTAGGTCATTTGCATTTTTTAGTATGCAAAATAAATGGA AAAATTAAAGTGCAATAAAAATATAATTTGGGAAATGAATGCAGTAAAATTGAAAACATTGAAATATTATAATTTAATAAAATAAACTTC AAAAAATGTATGAAAATATAAGTATCTTTACTTATATAGGATTAAATATATTTCTGATAATCTGTCCTCTATAATGAATTGGTTTAATTA TGTTTTTCTGTTTTTAGAAATGGGCATCTTTTTATTTCTGGAAACAACTTTTTAATGAGATTTTATCAAACATTAGACTATGACTAATTA TAATATTCAAAGCCAATACCAAAACGATGGATAAATAAATGAATAAAACAAGGCACATTAATAGAAAAAAATGAATGAAATCAATTACGG GTTCTACTTGAAACACCTAATCTCATTATAATAGCAATAATAAAACAATTTGTACATACTTTATTAGTCGAACATTTATTAAAAATATAA GAGCATAGAGCAAATTAATTTGGAAGAAAATTTAAATCTTTTACATACAAATACCCTCAAGAATAATAAATCATGGAGTATTAATAAAAT TAAACCAGCTGATAATTTTAGAAAGTGCTTCATGCACAGAGACTTTTATTCAAGTCCTCTTTGCTTTCTGCTAGTGCTTTTTTTTTTTTC TTGAAATGGGATGGGATCTCACTCTGTCACCCAGGCTGGAGTGCAGTAGCACGATAGCAGCGCACTGCAACCTGGACCTCCTGGGCTCAA >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000396654_chr2_224642586_-_1215nt CCTTTGGCTTCCCCAATTGTGTGGGGGCTGCCATTGACCCGGTGTCGCCGCAGAACCGAGGTCGCCGAGTGATGATGTTGTGAAGTCGCC CGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCCGCTGCATTAGG GGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCACATGAGAGTGCT CGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATTATTGAATGGCT TGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAATCCCAGAATGCA ATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTCATATTGCTCTT CAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAAATTGTTCAGAT TATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGTTTATATTTTTG CTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATATTTTGGAAATGT CTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAGGAAACATCCAA GAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGACAATGGAAGAATACATGAACAAGCCTACATTTTAACTGGAAAT CTACTTGAAGACTCCAGCACTACATGTTATGAAGCTGTAAATAAGCAACGCCTCCCATCCGGTTTTTTGATGGAGCCTCAGGCACCATGC CAAAAATAATTTAAAGGGATTCTTTGTTAACTAACAAAGTTAAAGTTGTTTAACATATTTATAATTACTATGTGTCTGTATTATTAAAAA >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000396653_chr2_224642586_-_974nt CCTTTGGCTTCCCCAATTGTGTGGGGGCTGCCATTGACCCGGTGTCGCCGCAGAACCGAGGTCGCCGAGTGATGATGTTGTGAAGTCGCC CGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCCGCTGCATTAGG GGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCACATGAGAGTGCT CGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATTATTGAATGGCT TGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAATCCCAGAATGCA ATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTCATATTGCTCTT CAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAAATTGTTCAGAT TATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTGTCTGTGAGCTGGATATTA TCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAGGAAACATCCAAGAAAATTGCTGTCAAAG CCATTGAAGACTCTGATATGTTACAGGAGGTCAGTACGGTTTCCCAAACCATGGGAGAAAGATGATGATGATGATGATGATGGTGTTAAT >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000446015_chr2_224642586_-_982nt CCTTTGGCTTCCCCAATTGTGTGGGGGCTGCCATTGACCCGGTGTCGCCGCAGAACCGAGGTCGCCGAGTGATGATGTTGTGAAGTCGCC CGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCCGCTGCATTAGG GGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCACATGAGAGTGCT CGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATTATTGAATGGCT TGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAATCCCAGAATGCA ATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTCATATTGCTCTT CAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAAATTGTTCAGAT TATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGTTTATATTTTTG CTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATATTTTGGAAATGT CTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAGGAAACATCCAA >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000409375_chr2_224642586_-_978nt CCTTTGGCTTCCCCAATTGTGTGGGGGCTGCCATTGACCCGGTGTCGCCGCAGAACCGAGGTCGCCGAGTGATGATGTTGTGAAGTCGCC CGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCCGCTGCATTAGG GGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCACATGAGAGTGCT CGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATTATTGAATGGCT TGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAATCCCAGAATGCA ATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTCATATTGCTCTT CAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAAATTGTTCAGAT TATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGTTTATATTTTTG CTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATATTTTGGAAATGA GTTTAATTGCTGGTTTCTCCTAATGAGGCTCCTGTCTGTCTTGGATTCCTGGTCTACGCCTGCCTTGAACTCCGAGGTTCCTCAGCTTGC >In-frame_TRAK2_ENST00000332624_chr2_202285140_-_AP1S3_ENST00000423110_chr2_224642586_-_832nt CCTTTGGCTTCCCCAATTGTGTGGGGGCTGCCATTGACCCGGTGTCGCCGCAGAACCGAGGTCGCCGAGTGATGATGTTGTGAAGTCGCC CGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCCGCTGCATTAGG GGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCACATGAGAGTGCT CGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATTATTGAATGGCT TGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAATCCCAGAATGCA ATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTCATATTGCTCTT CAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAAATTGTTCAGAT TATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGTTTATATTTTTG CTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATATTTTGGAAATAC >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000443700_chr2_224642586_-_2071nt GTGAAGTCGCCCGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCC GCTGCATTAGGGGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCAC ATGAGAGTGCTCGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATT ATTGAATGGCTTGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAAT CCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTC ATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAA ATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGT TTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATAT TTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAG GAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGAATCGTTTGAGCCCCAGAGGCAGAGATTGCAGT GAGCCGAGATCATGCCATTGCACTCTAGCCTAGGCAACAAGAGCAAAACTCCATCTAAAAAAAAAAAAAAAGAAAAGAAAAAGGAGAATT ATGAAGAACTTGGTTCCACAAGTAAGATAGTCCTCATACTGCATCAGTAGTGACTTAAACTTTTTTAAAACTTTTATTTTTTGTGGGGGG ATCTGTTGAATTTGGGAAGCCTCCAGTTTTAATAAAATTTTTTTATTATGGTGGAAACATGTCTGTAAAACTTAGGACTATAGAAATGCA AAGAATAAAGAACTGAGGGAGTTACACACATTTGTAGTCAGAAATTAAGTTCAAAAAATAATTTAGGTCATTTGCATTTTTTAGTATGCA AAATAAATGGAAAAATTAAAGTGCAATAAAAATATAATTTGGGAAATGAATGCAGTAAAATTGAAAACATTGAAATATTATAATTTAATA AAATAAACTTCAAAAAATGTATGAAAATATAAGTATCTTTACTTATATAGGATTAAATATATTTCTGATAATCTGTCCTCTATAATGAAT TGGTTTAATTATGTTTTTCTGTTTTTAGAAATGGGCATCTTTTTATTTCTGGAAACAACTTTTTAATGAGATTTTATCAAACATTAGACT ATGACTAATTATAATATTCAAAGCCAATACCAAAACGATGGATAAATAAATGAATAAAACAAGGCACATTAATAGAAAAAAATGAATGAA ATCAATTACGGGTTCTACTTGAAACACCTAATCTCATTATAATAGCAATAATAAAACAATTTGTACATACTTTATTAGTCGAACATTTAT TAAAAATATAAGAGCATAGAGCAAATTAATTTGGAAGAAAATTTAAATCTTTTACATACAAATACCCTCAAGAATAATAAATCATGGAGT ATTAATAAAATTAAACCAGCTGATAATTTTAGAAAGTGCTTCATGCACAGAGACTTTTATTCAAGTCCTCTTTGCTTTCTGCTAGTGCTT TTTTTTTTTTCTTGAAATGGGATGGGATCTCACTCTGTCACCCAGGCTGGAGTGCAGTAGCACGATAGCAGCGCACTGCAACCTGGACCT CCTGGGCTCAAGCAATCCTCTCACCGCAGCCTCCTGAGTAGCTGGGGCTACAGGTGTGTGCCACCATACTTGGCTAATTAAAAAAAAAAA >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000396654_chr2_224642586_-_1136nt GTGAAGTCGCCCGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCC GCTGCATTAGGGGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCAC ATGAGAGTGCTCGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATT ATTGAATGGCTTGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAAT CCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTC ATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAA ATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGT TTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATAT TTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAG GAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGACAATGGAAGAATACATGAACAAGCCTACATTT TAACTGGAAATCTACTTGAAGACTCCAGCACTACATGTTATGAAGCTGTAAATAAGCAACGCCTCCCATCCGGTTTTTTGATGGAGCCTC AGGCACCATGCCAAAAATAATTTAAAGGGATTCTTTGTTAACTAACAAAGTTAAAGTTGTTTAACATATTTATAATTACTATGTGTCTGT >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000396653_chr2_224642586_-_895nt GTGAAGTCGCCCGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCC GCTGCATTAGGGGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCAC ATGAGAGTGCTCGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATT ATTGAATGGCTTGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAAT CCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTC ATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAA ATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTGTCTGTGA GCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAGGAAACATCCAAGAAAAT TGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGGTCAGTACGGTTTCCCAAACCATGGGAGAAAGATGATGATGATGATGATG >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000446015_chr2_224642586_-_903nt GTGAAGTCGCCCGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCC GCTGCATTAGGGGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCAC ATGAGAGTGCTCGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATT ATTGAATGGCTTGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAAT CCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTC ATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAA ATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGT TTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATAT TTTGGAAATGTCTGTGAGCTGGATATTATCTTTAATTTTGAAAAGGCTTATTTCATCCTGGACGAGTTTATAATAGGTGGGGAAATTCAG GAAACATCCAAGAAAATTGCTGTCAAAGCCATTGAAGACTCTGATATGTTACAGGAGGTCAGTACGGTTTCCCAAACCATGGGAGAAAGA >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000409375_chr2_224642586_-_899nt GTGAAGTCGCCCGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCC GCTGCATTAGGGGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCAC ATGAGAGTGCTCGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATT ATTGAATGGCTTGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAAT CCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTC ATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAA ATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGT TTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATAT TTTGGAAATGAGTTTAATTGCTGGTTTCTCCTAATGAGGCTCCTGTCTGTCTTGGATTCCTGGTCTACGCCTGCCTTGAACTCCGAGGTT >In-frame_TRAK2_ENST00000430254_chr2_202285140_-_AP1S3_ENST00000423110_chr2_224642586_-_753nt GTGAAGTCGCCCGCCTGTCCCTGCCACGCCCGGGCGGTTGCTGGCAGTGGGAGCAGCGGCAGCAGCTTCGGCTGCTGCTTTCAGGCTGCC GCTGCATTAGGGGCTTCCTGAGGAAGCGCGGGCGGACGACAGAGGATGCCGAACCACTCCAGTCATGACTGTCCAAAGTATGATAATCAC ATGAGAGTGCTCGTTGCTACGGATGTCATTTGACTCATCAGAGAAAATCTGTCTAAAAGAAAATATCCATGTGACCAAATCCATTTCATT ATTGAATGGCTTGATGGATTTCCTTTACTCTGATTCATACCAAAGCTGTCCTTCTCAACCAAAGCAAGAAAGGATCCTGCATGAGTCAAT CCCAGAATGCAATTTTTACATCACCAACAGGTGAAGAAAACCTCATGAATAGCAATCACAGAGACTCGGAGAGCATCACTGATACATTTC ATATTGCTCTTCAGTCGACAAGGGAAATTACGGCTACAGAAATGGTACATCACTCTCCCTGATAAAGAGAGGAAGAAGATCACCCGGGAA ATTGTTCAGATTATTCTCTCCCGTGGTCACAGGACAAGCAGTTTTGTTGACTGGAAGGAGCTAAAACTTGTTTATAAAAGGTATGCTAGT TTATATTTTTGCTGTGCAATAGAAAATCAGGACAATGAGCTCTTGACGCTAGAGATTGTGCATCGTTACGTGGAGCTGCTGGACAAATAT |
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FusionGenePPI for TRAK2_AP1S3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| TRAK2 | KCNJ2, GABRB2, TRAK1, ELAVL1, ACAD11, OGT, KLC1, KLC2, KLC4, PRKAG1, PLK1, CKAP2, KIF1B, KIF5C, KIF5B, KIF5A, RHOT1, GSK3B, GSK3A, MAP7D3, FAM83D, MTX2, PRKAA1, TRIM71, IQCB1, HOOK1, FOXK1, OFD1, NEDD1, PRKAB2, C14orf80, C9orf89, XPO1, DTNBP1, SNAPIN | AP1S3 | PRKAG1, AAGAB, AP1M2, AP2M1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| Hgene | TRAK2 | chr2:202285140 | chr2:224642586 | ENST00000332624 | - | 2 | 16 | 359_509 | 30 | 915 | HGS |
| Hgene | TRAK2 | chr2:202285140 | chr2:224642586 | ENST00000430254 | - | 2 | 8 | 359_509 | 30 | 312 | HGS |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TRAK2_AP1S3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TRAK2_AP1S3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | TRAK2 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
| Tgene | AP1S3 | C4015235 | PSORIASIS 15, PUSTULAR, SUSCEPTIBILITY TO | 1 | UNIPROT |
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