FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact

Center for Computational Systems Medicine
leaf

FusionGeneSummary

leaf

FusionProtFeature

leaf

FusionGeneSequence

leaf

FusionGenePPI

leaf

RelatedDrugs

leaf

RelatedDiseases

Fusion gene ID: 39217

FusionGeneSummary for TPM1_HOPX

check button Fusion gene summary
Fusion gene informationFusion gene name: TPM1_HOPX
Fusion gene ID: 39217
HgeneTgene
Gene symbol

TPM1

HOPX

Gene ID

7168

84525

Gene nametropomyosin 1HOP homeobox
SynonymsC15orf13|CMD1Y|CMH3|HEL-S-265|HTM-alpha|LVNC9|TMSACAMEO|HOD|HOP|LAGY|NECC1|OB1|SMAP31|TOTO
Cytomap

15q22.2

4q12

Type of geneprotein-codingprotein-coding
Descriptiontropomyosin alpha-1 chainalpha-tropomyosincardiomyopathy, hypertrophic 3epididymis secretory protein Li 265sarcomeric tropomyosin kappatropomyosin 1 (alpha)homeodomain-only proteinlung cancer-associated Y proteinnot expressed in choriocarcinoma clone 1odd homeobox protein 1
Modification date2018052320180523
UniProtAcc

P09493

Q9BPY8

Ensembl transtripts involved in fusion geneENST00000288398, ENST00000358278, 
ENST00000560445, ENST00000403994, 
ENST00000357980, ENST00000559556, 
ENST00000559397, ENST00000267996, 
ENST00000334895, ENST00000404484, 
ENST00000560959, ENST00000559281, 
ENST00000317516, 
ENST00000554144, 
ENST00000420433, ENST00000556376, 
ENST00000381260, ENST00000337881, 
ENST00000605395, ENST00000508121, 
ENST00000503639, ENST00000553379, 
ENST00000381255, ENST00000317745, 
ENST00000555760, ENST00000556614, 
Fusion gene scores* DoF score6 X 7 X 2=844 X 3 X 3=36
# samples 85
** MAII scorelog2(8/84*10)=-0.070389327891398
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(5/36*10)=0.473931188332412
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: TPM1 [Title/Abstract] AND HOPX [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneHOPX

GO:0001829

trophectodermal cell differentiation

17576768

TgeneHOPX

GO:0045596

negative regulation of cell differentiation

17576768

TgeneHOPX

GO:0051131

chaperone-mediated protein complex assembly

10811660


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1AW950454TPM1chr15

63363855

+HOPXchr4

57516008

-
ChiTaRS3.1T28253TPM1chr15

63363855

+HOPXchr4

57516008

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-intronENST00000288398ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000288398ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000358278ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560445ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000403994ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000357980ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559556ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000559397ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000267996ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000334895ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
3UTR-intronENST00000404484ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000560959ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000559281ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000554144TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000420433TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000556376TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000381260TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000337881TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000605395TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000508121TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000503639TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000553379TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000381255TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000317745TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000555760TPM1chr15

63363855

+HOPXchr4

57516008

-
intron-intronENST00000317516ENST00000556614TPM1chr15

63363855

+HOPXchr4

57516008

-

Top

FusionProtFeatures for TPM1_HOPX


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
TPM1

P09493

HOPX

Q9BPY8

Atypical homeodomain protein which does not bind DNA andis required to modulate cardiac growth and development. Acts viaits interaction with SRF, thereby modulating the expression ofSRF-dependent cardiac-specific genes and cardiac development.Prevents SRF-dependent transcription either by inhibiting SRFbinding to DNA or by recruiting histone deacetylase (HDAC)proteins that prevent transcription by SRF. Overexpression causescardiac hypertrophy (By similarity). May act as a tumorsuppressor. Acts as a co-chaperone for HSPA1A and HSPA1B chaperoneproteins and assists in chaperone-mediated protein refolding(PubMed:27708256). {ECO:0000250|UniProtKB:Q8R1H0,ECO:0000269|PubMed:27708256}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


Top

FusionGeneSequence for TPM1_HOPX


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

Top

FusionGenePPI for TPM1_HOPX


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for TPM1_HOPX


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
HgeneTPM1P09493DB11638ArtenimolTropomyosin alpha-1 chainsmall moleculeapproved|investigational

Top

RelatedDiseases for TPM1_HOPX


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneTPM1C1861863CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 3 (disorder)5CTD_human;UNIPROT
HgeneTPM1C2678476Cardiomyopathy, Dilated, 1y2CTD_human;UNIPROT
HgeneTPM1C0014859Esophageal Neoplasms1CTD_human
HgeneTPM1C0020538Hypertensive disease1CTD_human
HgeneTPM1C0022548Keloid1CTD_human
HgeneTPM1C0023893Liver Cirrhosis, Experimental1CTD_human
HgeneTPM1C0279626Squamous cell carcinoma of esophagus1CTD_human
HgeneTPM1C0949658Cardiomyopathy, Hypertrophic, Familial1CTD_human
TgeneHOPXC0023893Liver Cirrhosis, Experimental1CTD_human