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Fusion gene ID: 39049 |
FusionGeneSummary for TOM1L2_ATPAF2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: TOM1L2_ATPAF2 | Fusion gene ID: 39049 | Hgene | Tgene | Gene symbol | TOM1L2 | ATPAF2 | Gene ID | 146691 | 91647 |
| Gene name | target of myb1 like 2 membrane trafficking protein | ATP synthase mitochondrial F1 complex assembly factor 2 | |
| Synonyms | - | ATP12|ATP12p|LP3663|MC5DN1 | |
| Cytomap | 17p11.2 | 17p11.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | TOM1-like protein 2target of Myb-like protein 2target of myb1-like 2 | ATP synthase mitochondrial F1 complex assembly factor 2ATP12 homolog | |
| Modification date | 20180519 | 20180519 | |
| UniProtAcc | Q6ZVM7 | Q8N5M1 | |
| Ensembl transtripts involved in fusion gene | ENST00000581396, ENST00000379504, ENST00000318094, ENST00000395739, ENST00000535933, ENST00000540946, ENST00000542206, ENST00000478943, ENST00000577517, | ENST00000585101, ENST00000474627, ENST00000469327, | |
| Fusion gene scores | * DoF score | 8 X 7 X 6=336 | 3 X 3 X 3=27 |
| # samples | 9 | 3 | |
| ** MAII score | log2(9/336*10)=-1.90046432644909 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: TOM1L2 [Title/Abstract] AND ATPAF2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Oncogene involved fusion gene, in-frame and retained their domain. Tumor suppressor gene involved fusion gene, in-frame but not retained their domain. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | TOM1L2 | GO:0007165 | signal transduction | 16479011 |
| Hgene | TOM1L2 | GO:0045839 | negative regulation of mitotic nuclear division | 16479011 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | HNSC | TCGA-CV-7253-01A | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000581396 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000581396 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| 5CDS-5UTR | ENST00000581396 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000379504 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000379504 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| 5CDS-5UTR | ENST00000379504 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000318094 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000318094 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| 5CDS-5UTR | ENST00000318094 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000395739 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000395739 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| 5CDS-5UTR | ENST00000395739 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000535933 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000535933 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| 5CDS-5UTR | ENST00000535933 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000540946 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000540946 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| 5CDS-5UTR | ENST00000540946 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000542206 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| In-frame | ENST00000542206 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| 5CDS-5UTR | ENST00000542206 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| intron-3CDS | ENST00000478943 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| intron-3CDS | ENST00000478943 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| intron-5UTR | ENST00000478943 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| intron-3CDS | ENST00000577517 | ENST00000585101 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| intron-3CDS | ENST00000577517 | ENST00000474627 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
| intron-5UTR | ENST00000577517 | ENST00000469327 | TOM1L2 | chr17 | 17810761 | - | ATPAF2 | chr17 | 17928018 | - |
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FusionProtFeatures for TOM1L2_ATPAF2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| TOM1L2 | ATPAF2 |
| Probable role in protein transport. May regulate growthfactor-induced mitogenic signaling. {ECO:0000269|PubMed:16412388,ECO:0000269|PubMed:16479011}. | May play a role in the assembly of the F1 component ofthe mitochondrial ATP synthase (ATPase).{ECO:0000269|PubMed:11410595}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000318094 | - | 2 | 14 | 20_152 | 45 | 463 | Domain | VHS |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000318094 | - | 2 | 14 | 219_307 | 45 | 463 | Domain | GAT |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000379504 | - | 2 | 15 | 20_152 | 45 | 508 | Domain | VHS |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000379504 | - | 2 | 15 | 219_307 | 45 | 508 | Domain | GAT |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000395739 | - | 2 | 14 | 20_152 | 45 | 463 | Domain | VHS |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000395739 | - | 2 | 14 | 219_307 | 45 | 463 | Domain | GAT |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000478943 | - | 1 | 9 | 20_152 | -189 | 241 | Domain | VHS |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000478943 | - | 1 | 9 | 219_307 | -189 | 241 | Domain | GAT |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000581396 | - | 2 | 14 | 20_152 | 45 | 458 | Domain | VHS |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000581396 | - | 2 | 14 | 219_307 | 45 | 458 | Domain | GAT |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000318094 | - | 2 | 14 | 329_334 | 45 | 463 | Motif | Note=Clathrin-binding |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000379504 | - | 2 | 15 | 329_334 | 45 | 508 | Motif | Note=Clathrin-binding |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000395739 | - | 2 | 14 | 329_334 | 45 | 463 | Motif | Note=Clathrin-binding |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000478943 | - | 1 | 9 | 329_334 | -189 | 241 | Motif | Note=Clathrin-binding |
| Hgene | >TOM1L2 | chr17:17810761 | chr17:17928018 | ENST00000581396 | - | 2 | 14 | 329_334 | 45 | 458 | Motif | Note=Clathrin-binding |
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FusionGeneSequence for TOM1L2_ATPAF2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_TOM1L2_ENST00000581396_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_61aa >In-frame_TOM1L2_ENST00000581396_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_195aa MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIP AKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL >In-frame_TOM1L2_ENST00000379504_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_61aa >In-frame_TOM1L2_ENST00000379504_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_195aa MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIP AKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL >In-frame_TOM1L2_ENST00000318094_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_61aa >In-frame_TOM1L2_ENST00000318094_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_195aa MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIP AKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL >In-frame_TOM1L2_ENST00000395739_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_61aa >In-frame_TOM1L2_ENST00000395739_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_195aa MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIP AKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL >In-frame_TOM1L2_ENST00000535933_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_61aa >In-frame_TOM1L2_ENST00000535933_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_195aa MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIP AKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL >In-frame_TOM1L2_ENST00000540946_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_61aa >In-frame_TOM1L2_ENST00000540946_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_195aa MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIP AKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL >In-frame_TOM1L2_ENST00000542206_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_61aa >In-frame_TOM1L2_ENST00000542206_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_195aa MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGYRVEEPETLVELQRNEWDPIIEWAEKRYGVEISSSTSIMGPSIP AKTREVLVSHLASYNTWALQGIEFVAAQLKSMVLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFIHL |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_TOM1L2_ENST00000581396_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_185nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG >In-frame_TOM1L2_ENST00000581396_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_585nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG AATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCT GCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAG TCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATC CAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTC >In-frame_TOM1L2_ENST00000379504_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_185nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG >In-frame_TOM1L2_ENST00000379504_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_585nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG AATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCT GCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAG TCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATC CAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTC >In-frame_TOM1L2_ENST00000318094_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_185nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG >In-frame_TOM1L2_ENST00000318094_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_585nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG AATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCT GCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAG TCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATC CAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTC >In-frame_TOM1L2_ENST00000395739_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_185nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG >In-frame_TOM1L2_ENST00000395739_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_585nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG AATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCT GCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAG TCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATC CAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTC >In-frame_TOM1L2_ENST00000535933_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_185nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG >In-frame_TOM1L2_ENST00000535933_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_585nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG AATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCT GCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAG TCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATC CAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTC >In-frame_TOM1L2_ENST00000540946_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_185nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG >In-frame_TOM1L2_ENST00000540946_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_585nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG AATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCT GCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAG TCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATC CAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTC >In-frame_TOM1L2_ENST00000542206_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_185nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG >In-frame_TOM1L2_ENST00000542206_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_585nt ATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGG ACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGG AATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCT GCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAG TCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATC CAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_TOM1L2_ENST00000581396_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_369nt GGGGGCAAGTGTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCC ACCCAAGATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGA GGATTGGACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACT TCAAAGGAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAGAAAAGTTCATCCAGCCTGCTAGG >In-frame_TOM1L2_ENST00000581396_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_1221nt GGGGGCAAGTGTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCC ACCCAAGATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGA GGATTGGACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACT TCAAAGGAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAG CATCCCTGCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCA GCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTA CCAGATCCAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCAT CCATCTCTGCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAGTG CAGCCACAGCTCCCCCGGCCTTCAGGGCTCCCCAGCCTGTGGGGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAG ATTCCCCCCGAGACACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGCAGTGAATG TAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTTATTAAATATTTCTCCACCCTGGAAATGTGCTGAGCCCTGTTTTCAC GTATGCCTCTGCACTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGC TGCCTGTGGTCAGGAACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTT >In-frame_TOM1L2_ENST00000379504_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_356nt AGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATGGAG TTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACGTTG AATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAATGAG >In-frame_TOM1L2_ENST00000379504_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_1208nt AGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATGGAG TTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACGTTG AATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAATGAG TGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCTGCCAAA ACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATG GTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATCCAGAAG TGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTCTGCTCC GAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTCC CCCGGCCTTCAGGGCTCCCCAGCCTGTGGGGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAGATTCCCCCCGAGA CACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATT GTGCAAGTGACTTTCTCTCGACTCTGATTTTATTAAATATTTCTCCACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGCCTCTGCA CTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAG GAACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTTTTTTTGGCTGGC >In-frame_TOM1L2_ENST00000318094_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_356nt AGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATGGAG TTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACGTTG AATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAATGAG >In-frame_TOM1L2_ENST00000318094_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_1208nt AGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATGGAG TTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACGTTG AATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAATGAG TGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCTGCCAAA ACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATG GTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATCCAGAAG TGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTCTGCTCC GAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTCC CCCGGCCTTCAGGGCTCCCCAGCCTGTGGGGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAGATTCCCCCCGAGA CACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATT GTGCAAGTGACTTTCTCTCGACTCTGATTTTATTAAATATTTCTCCACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGCCTCTGCA CTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAG GAACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTTTTTTTGGCTGGC >In-frame_TOM1L2_ENST00000395739_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_363nt AAGTGTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAA GATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTG GACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAG GAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAGAAAAGTTCATCCAGCCTGCTAGGATGGCT >In-frame_TOM1L2_ENST00000395739_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_1215nt AAGTGTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAA GATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTG GACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAG GAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCC TGCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAA GTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGAT CCAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCT CTGCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAGTGCAGCCA CAGCTCCCCCGGCCTTCAGGGCTCCCCAGCCTGTGGGGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAGATTCCC CCCGAGACACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAG ATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTTATTAAATATTTCTCCACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGC CTCTGCACTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTG TGGTCAGGAACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTTTTTTT >In-frame_TOM1L2_ENST00000535933_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_379nt AGAGTGGGGAGGGGGCAAGTGTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTG CGTGTTGTCCACCCAAGATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCC TGCAAAGTGAGGATTGGACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACAT TAGTGGAACTTCAAAGGAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGGGAGGATTTCCATGTCAGCTAGAAAAGTTCATCCA >In-frame_TOM1L2_ENST00000535933_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_1231nt AGAGTGGGGAGGGGGCAAGTGTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTG CGTGTTGTCCACCCAAGATGGAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCC TGCAAAGTGAGGATTGGACGTTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACAT TAGTGGAACTTCAAAGGAATGAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAA TGGGACCCAGCATCCCTGCCAAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTG TAGCTGCCCAGCTCAAGTCCATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGG AGGAGGAGTACCAGATCCAGAAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCA CCCTCTTCATCCATCTCTGCTCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGAT AGAGGCAGTGCAGCCACAGCTCCCCCGGCCTTCAGGGCTCCCCAGCCTGTGGGGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCG TCACCCTGAGATTCCCCCCGAGACACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCA GCAGTGAATGTAGGAGATGAATTGTGCAAGTGACTTTCTCTCGACTCTGATTTTATTAAATATTTCTCCACCCTGGAAATGTGCTGAGCC CTGTTTTCACGTATGCCTCTGCACTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTT GGATATCTGCTGCCTGTGGTCAGGAACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGC >In-frame_TOM1L2_ENST00000540946_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_356nt AGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATGGAG TTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACGTTG AATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAATGAG >In-frame_TOM1L2_ENST00000540946_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_1208nt AGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATGGAG TTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACGTTG AATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAATGAG TGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCTGCCAAA ACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCCATG GTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATCCAGAAG TGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTCTGCTCC GAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAGTGCAGCCACAGCTCC CCCGGCCTTCAGGGCTCCCCAGCCTGTGGGGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAGATTCCCCCCGAGA CACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGAATT GTGCAAGTGACTTTCTCTCGACTCTGATTTTATTAAATATTTCTCCACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGCCTCTGCA CTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAG GAACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTTTTTTTGGCTGGC >In-frame_TOM1L2_ENST00000542206_chr17_17810761_-_ATPAF2_ENST00000585101_chr17_17928018_-_359nt GTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATG GAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACG TTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAAT >In-frame_TOM1L2_ENST00000542206_chr17_17810761_-_ATPAF2_ENST00000474627_chr17_17928018_-_1211nt GTCAGTCAGGACGGGAGTCCGGCGGGTTACAGCGGAGGCCTAGGTGGCAGACAGGGGGCCCGGGCCGCTGCGTGTTGTCCACCCAAGATG GAGTTCCTCCTGGGGAACCCGTTCAGCACACCAGTGGGGCAGTGCCTCGAAAAGGCAACAGATGGCTCCCTGCAAAGTGAGGATTGGACG TTGAATATGGAGATCTGTGACATCATCAATGAGACGGAGGAAGGCTACAGGGTGGAGGAGCCCGAGACATTAGTGGAACTTCAAAGGAAT GAGTGGGATCCAATCATCGAATGGGCTGAGAAAAGATACGGCGTGGAGATCAGCTCCTCCACCAGCATAATGGGACCCAGCATCCCTGCC AAAACTCGGGAGGTGCTCGTCAGCCACCTGGCATCTTACAACACATGGGCTTTACAAGGGATTGAGTTTGTAGCTGCCCAGCTCAAGTCC ATGGTGCTAACCTTGGGCCTGATTGACCTGCGCCTGACAGTGGAGCAGGCCGTGCTGCTGTCACGCCTGGAGGAGGAGTACCAGATCCAG AAGTGGGGCAACATTGAGTGGGCCCATGACTATGAGCTGCAGGAGCTGCGGGCCCGCACCGCCGCCGGCACCCTCTTCATCCATCTCTGC TCCGAGAGCACCACAGTCAAGCACAAGCTCCTGAAGGAGTGAGGCCTGGGCAGAGCACACTCAGCAGGATAGAGGCAGTGCAGCCACAGC TCCCCCGGCCTTCAGGGCTCCCCAGCCTGTGGGGCTGGCTTCCTTGGCTTTTGGGGACTCGGCCTCAGCGTCACCCTGAGATTCCCCCCG AGACACAGTGCGCTAGTACGGCTGTCCGGAGGTCAGCCTGATTTCAACCCAGGTGCCCCTGGCCTGGCCAGCAGTGAATGTAGGAGATGA ATTGTGCAAGTGACTTTCTCTCGACTCTGATTTTATTAAATATTTCTCCACCCTGGAAATGTGCTGAGCCCTGTTTTCACGTATGCCTCT GCACTTCTCCATTCTTCCTGTTTTGTCTAGGTTCCAGAGGGTTAAACAGCTTATCTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGT CAGGAACCTTGCACTGGGGAAACAATCATGTAATCCACAGACAACTCTATTTGTGTTCTTCAGCCTCAGCCTGAAGGCTTTTTTTTGGCT |
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FusionGenePPI for TOM1L2_ATPAF2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| TOM1L2 | TOLLIP, NEDD4, CLTC, APP, AHCYL1, LAGE3, IGBP1, SULT1A1, RCN1, SIN3A, S100A4, DSTN, DFFA, UBA2, S100A6, SRXN1, SERPINH1, UBC, LAPTM5, RNF11, MYO6, BAG3, MAP3K1, AGL, XPO1, SMURF1, CUEDC1, SZRD1, NDUFA6, WBP2 | ATPAF2 | APP, TRIM23, ATP5B, DDIT3, EBF1, EWSR1, MAGEA6, REL, TRIM27, TP53BP2, SORBS2, PKP4, LRRFIP2, IKZF3, RPIA, RAD54B, SPG21, PAK7, PRDM14, LZTS2, LNX1, KRT40, ECHS1, MRM1, NDUFAB1, OXLD1, C7orf55, ATP5A1, FECH, KLHL22, TRMT61B, DNLZ, RNMTL1, CLPX, FDPS |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TOM1L2_ATPAF2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TOM1L2_ATPAF2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | ATPAF2 | C3276276 | MITOCHONDRIAL COMPLEX V (ATP SYNTHASE) DEFICIENCY, NUCLEAR TYPE 1 | 1 | CTD_human;UNIPROT |
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