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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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Fusion gene ID: 38794

FusionGeneSummary for TMTC1_YEATS4

check button Fusion gene summary
Fusion gene informationFusion gene name: TMTC1_YEATS4
Fusion gene ID: 38794
HgeneTgene
Gene symbol

TMTC1

YEATS4

Gene ID

83857

8089

Gene nametransmembrane and tetratricopeptide repeat containing 1YEATS domain containing 4
SynonymsARG99|OLF|TMTC1A4930573H17Rik|B230215M10Rik|GAS41|NUBI-1|YAF9
Cytomap

12p11.22

12q15

Type of geneprotein-codingprotein-coding
Descriptiontransmembrane and TPR repeat-containing protein 1transmembrane and tetratricopeptide repeat containing 1AYEATS domain-containing protein 4NuMA binding protein 1glioma-amplified sequence 41nuBI1
Modification date2018051920180519
UniProtAcc

Q8IUR5

O95619

Ensembl transtripts involved in fusion geneENST00000256062, ENST00000551659, 
ENST00000552618, ENST00000319685, 
ENST00000539277, ENST00000381224, 
ENST00000247843, ENST00000548020, 
Fusion gene scores* DoF score7 X 6 X 5=2108 X 3 X 4=96
# samples 77
** MAII scorelog2(7/210*10)=-1.58496250072116
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(7/96*10)=-0.45567948377619
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: TMTC1 [Title/Abstract] AND YEATS4 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotationOncogene involved fusion gene, in-frame and retained their domain.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneYEATS4

GO:0043967

histone H4 acetylation

14966270

TgeneYEATS4

GO:0043968

histone H2A acetylation

14966270


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVSARCTCGA-DX-A48N-01ATMTC1chr12

29709790

-YEATS4chr12

69783927

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000256062ENST00000247843TMTC1chr12

29709790

-YEATS4chr12

69783927

+
In-frameENST00000256062ENST00000548020TMTC1chr12

29709790

-YEATS4chr12

69783927

+
Frame-shiftENST00000551659ENST00000247843TMTC1chr12

29709790

-YEATS4chr12

69783927

+
Frame-shiftENST00000551659ENST00000548020TMTC1chr12

29709790

-YEATS4chr12

69783927

+
Frame-shiftENST00000552618ENST00000247843TMTC1chr12

29709790

-YEATS4chr12

69783927

+
Frame-shiftENST00000552618ENST00000548020TMTC1chr12

29709790

-YEATS4chr12

69783927

+
5UTR-3CDSENST00000319685ENST00000247843TMTC1chr12

29709790

-YEATS4chr12

69783927

+
5UTR-3CDSENST00000319685ENST00000548020TMTC1chr12

29709790

-YEATS4chr12

69783927

+
Frame-shiftENST00000539277ENST00000247843TMTC1chr12

29709790

-YEATS4chr12

69783927

+
Frame-shiftENST00000539277ENST00000548020TMTC1chr12

29709790

-YEATS4chr12

69783927

+
In-frameENST00000381224ENST00000247843TMTC1chr12

29709790

-YEATS4chr12

69783927

+
In-frameENST00000381224ENST00000548020TMTC1chr12

29709790

-YEATS4chr12

69783927

+

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FusionProtFeatures for TMTC1_YEATS4


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
TMTC1

Q8IUR5

YEATS4

O95619

Component of the NuA4 histone acetyltransferase (HAT)complex which is involved in transcriptional activation of selectgenes principally by acetylation of nucleosomal histones H4 andH2A. This modification may both alter nucleosome - DNAinteractions and promote interaction of the modified histones withother proteins which positively regulate transcription. Thiscomplex may be required for the activation of transcriptionalprograms associated with oncogene and proto-oncogene mediatedgrowth induction, tumor suppressor mediated growth arrest andreplicative senescence, apoptosis, and DNA repair. NuA4 may alsoplay a direct role in DNA repair when recruited to sites of DNAdamage. {ECO:0000269|PubMed:14966270}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018483_516558883RepeatNote=TPR 1
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018518_547558883RepeatNote=TPR 2
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018111_131450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018161_181450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018198_218450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-101821_41450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018314_334450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018355_375450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018382_402450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018404_424450775TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213111_131512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213161_181512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213198_218512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-121321_41512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213314_334512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213355_375512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213382_402512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213404_424512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213439_459512575TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018111_131558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018161_181558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018198_218558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-101821_41558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018314_334558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018355_375558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018382_402558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018404_424558883TransmembraneHelical
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018439_459558883TransmembraneHelical
TgeneYEATS4chr12:29709790chr12:69783927ENST00000247843+57178_226171228Coiled coilOntology_term=ECO:0000255

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018483_516450775RepeatNote=TPR 1
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018518_547450775RepeatNote=TPR 2
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018548_581450775RepeatNote=TPR 3
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018583_615450775RepeatNote=TPR 4
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018616_649450775RepeatNote=TPR 5
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018650_683450775RepeatNote=TPR 6
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018684_716450775RepeatNote=TPR 7
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018751_784450775RepeatNote=TPR 8
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018789_822450775RepeatNote=TPR 9
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018823_856450775RepeatNote=TPR 10
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213483_516512575RepeatNote=TPR 1
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213518_547512575RepeatNote=TPR 2
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213548_581512575RepeatNote=TPR 3
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213583_615512575RepeatNote=TPR 4
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213616_649512575RepeatNote=TPR 5
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213650_683512575RepeatNote=TPR 6
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213684_716512575RepeatNote=TPR 7
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213751_784512575RepeatNote=TPR 8
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213789_822512575RepeatNote=TPR 9
HgeneTMTC1chr12:29709790chr12:69783927ENST00000381224-1213823_856512575RepeatNote=TPR 10
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018548_581558883RepeatNote=TPR 3
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018583_615558883RepeatNote=TPR 4
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018616_649558883RepeatNote=TPR 5
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018650_683558883RepeatNote=TPR 6
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018684_716558883RepeatNote=TPR 7
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018751_784558883RepeatNote=TPR 8
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018789_822558883RepeatNote=TPR 9
HgeneTMTC1chr12:29709790chr12:69783927ENST00000539277-1018823_856558883RepeatNote=TPR 10
HgeneTMTC1chr12:29709790chr12:69783927ENST00000256062-1018439_459450775TransmembraneHelical
TgeneYEATS4chr12:29709790chr12:69783927ENST00000247843+5722_126171228DomainYEATS


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FusionGeneSequence for TMTC1_YEATS4


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_TMTC1_ENST00000256062_chr12_29709790_-_YEATS4_ENST00000247843_chr12_69783927_+_507aa
MNPFYFHAVNIILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSLDQGCVGGSFPS
TVSPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSNKQDKSSNGALCPRSPQQPGSPQPSSLPGHPHRENGKQQRFPHKGAWGGC
HSPLPPEPKSSGFPVSPRAVWSMMRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATIFLAVVMALLSLHCLAAFKRL
EHKEVLVGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILFVHGLSKLCTWLNRCGATTLIVSTVLLLLLFSWKTVKQNEIWLSR
ESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTRDTAEAKMYYQRALQLHPQHNRALFNLGNLL

>In-frame_TMTC1_ENST00000256062_chr12_29709790_-_YEATS4_ENST00000548020_chr12_69783927_+_507aa
MNPFYFHAVNIILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPIHTEAVAGIVGRADVLACLLFLLAFLSYNRSLDQGCVGGSFPS
TVSPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSNKQDKSSNGALCPRSPQQPGSPQPSSLPGHPHRENGKQQRFPHKGAWGGC
HSPLPPEPKSSGFPVSPRAVWSMMRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDMRNLATIFLAVVMALLSLHCLAAFKRL
EHKEVLVGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGYCILFVHGLSKLCTWLNRCGATTLIVSTVLLLLLFSWKTVKQNEIWLSR
ESLFRSGVQTLPHNAKVHYNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTRDTAEAKMYYQRALQLHPQHNRALFNLGNLL

>In-frame_TMTC1_ENST00000381224_chr12_29709790_-_YEATS4_ENST00000247843_chr12_69783927_+_56aa

>In-frame_TMTC1_ENST00000381224_chr12_29709790_-_YEATS4_ENST00000548020_chr12_69783927_+_56aa


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_TMTC1_ENST00000256062_chr12_29709790_-_YEATS4_ENST00000247843_chr12_69783927_+_1522nt
ATGAACCCATTCTACTTTCATGCAGTAAATATAATTTTACACTGCTTAGTGACTCTTGTGCTGATGTACACCTGTGATAAAACTGTCTTC
AAGAATCGTGGACTTGCTTTTGTAACGGCATTGCTTTTTGCTGTACATCCTATTCATACTGAGGCGGTGGCTGGGATCGTTGGCAGAGCG
GACGTGTTAGCGTGTCTGCTGTTTCTATTGGCCTTTCTCTCGTACAACAGGAGTCTGGATCAGGGCTGTGTTGGGGGAAGTTTCCCTTCC
ACGGTGTCTCCCTTCTTCTTGCTGCTCAGTTTGTTTCTGGGGACCTGTGCGATGCTGGTGAAAGAGACAGGCATCACGGTGTTTGGAGTG
TGCTTGGTTTATGACCTCTTTTCCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGTCCACGCAGCCCACAGCAGCCCGGG
AGCCCCCAGCCCTCCTCACTGCCAGGCCATCCTCACCGGGAGAATGGGAAGCAGCAGCGGTTCCCTCACAAAGGAGCTTGGGGTGGCTGC
CACTCTCCACTGCCACCAGAACCCAAGAGCAGTGGATTCCCAGTGTCCCCACGAGCTGTGTGGTCCATGATGAGATTCCTCACCTATTCC
TACCTCTTGGCCTTCAATGTGTGGCTTCTGCTTGCACCCGTGACCCTGTGCTATGACTGGCAGGTCGGCAGTATTCCTCTGGTAGAGACC
ATATGGGACATGCGGAACTTAGCCACCATCTTTCTGGCGGTTGTGATGGCCTTATTGAGCCTGCACTGCTTAGCAGCCTTTAAGAGACTG
GAGCACAAGGAGGTTTTAGTCGGCTTGTTGTTCCTGGTGTTCCCGTTCATTCCAGCCAGCAACCTCTTCTTCAGGGTGGGTTTTGTGGTG
GCGGAGAGAGTCCTTTACATGCCTAGCATGGGCTACTGCATCCTTTTTGTGCATGGACTGAGCAAGCTCTGCACTTGGCTGAATCGATGT
GGGGCCACCACCCTGATTGTGTCCACTGTGTTGCTGCTGTTGCTTTTCTCTTGGAAAACTGTGAAACAGAATGAAATTTGGCTGTCAAGA
GAGTCCCTATTCAGGTCTGGAGTTCAAACTCTGCCCCACAATGCCAAGGTTCACTACAACTATGCCAATTTCCTGAAGGACCAAGGTCGG
AACAAGGAAGCGATCTACCACTACAGAACAGCTCTCAAGTTGTATCCACGCCATGCAAGTGCGCTCAACAACCTTGGAACACTGACGAGA
GACACAGCAGAGGCAAAGATGTACTATCAGAGGGCTCTCCAGCTCCATCCACAGCATAACCGGGCTCTTTTCAATCTGGGGAATCTCCTC
AATTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAGCTTTGAGATTGCAGAGCTTAAGGAGAGATT

>In-frame_TMTC1_ENST00000256062_chr12_29709790_-_YEATS4_ENST00000548020_chr12_69783927_+_1522nt
ATGAACCCATTCTACTTTCATGCAGTAAATATAATTTTACACTGCTTAGTGACTCTTGTGCTGATGTACACCTGTGATAAAACTGTCTTC
AAGAATCGTGGACTTGCTTTTGTAACGGCATTGCTTTTTGCTGTACATCCTATTCATACTGAGGCGGTGGCTGGGATCGTTGGCAGAGCG
GACGTGTTAGCGTGTCTGCTGTTTCTATTGGCCTTTCTCTCGTACAACAGGAGTCTGGATCAGGGCTGTGTTGGGGGAAGTTTCCCTTCC
ACGGTGTCTCCCTTCTTCTTGCTGCTCAGTTTGTTTCTGGGGACCTGTGCGATGCTGGTGAAAGAGACAGGCATCACGGTGTTTGGAGTG
TGCTTGGTTTATGACCTCTTTTCCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGTCCACGCAGCCCACAGCAGCCCGGG
AGCCCCCAGCCCTCCTCACTGCCAGGCCATCCTCACCGGGAGAATGGGAAGCAGCAGCGGTTCCCTCACAAAGGAGCTTGGGGTGGCTGC
CACTCTCCACTGCCACCAGAACCCAAGAGCAGTGGATTCCCAGTGTCCCCACGAGCTGTGTGGTCCATGATGAGATTCCTCACCTATTCC
TACCTCTTGGCCTTCAATGTGTGGCTTCTGCTTGCACCCGTGACCCTGTGCTATGACTGGCAGGTCGGCAGTATTCCTCTGGTAGAGACC
ATATGGGACATGCGGAACTTAGCCACCATCTTTCTGGCGGTTGTGATGGCCTTATTGAGCCTGCACTGCTTAGCAGCCTTTAAGAGACTG
GAGCACAAGGAGGTTTTAGTCGGCTTGTTGTTCCTGGTGTTCCCGTTCATTCCAGCCAGCAACCTCTTCTTCAGGGTGGGTTTTGTGGTG
GCGGAGAGAGTCCTTTACATGCCTAGCATGGGCTACTGCATCCTTTTTGTGCATGGACTGAGCAAGCTCTGCACTTGGCTGAATCGATGT
GGGGCCACCACCCTGATTGTGTCCACTGTGTTGCTGCTGTTGCTTTTCTCTTGGAAAACTGTGAAACAGAATGAAATTTGGCTGTCAAGA
GAGTCCCTATTCAGGTCTGGAGTTCAAACTCTGCCCCACAATGCCAAGGTTCACTACAACTATGCCAATTTCCTGAAGGACCAAGGTCGG
AACAAGGAAGCGATCTACCACTACAGAACAGCTCTCAAGTTGTATCCACGCCATGCAAGTGCGCTCAACAACCTTGGAACACTGACGAGA
GACACAGCAGAGGCAAAGATGTACTATCAGAGGGCTCTCCAGCTCCATCCACAGCATAACCGGGCTCTTTTCAATCTGGGGAATCTCCTC
AATTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAGCTTTGAGATTGCAGAGCTTAAGGAGAGATT

>In-frame_TMTC1_ENST00000381224_chr12_29709790_-_YEATS4_ENST00000247843_chr12_69783927_+_170nt
TTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAGCTTTGAGATTGCAGAGCTTAAGGAGAGATTAA

>In-frame_TMTC1_ENST00000381224_chr12_29709790_-_YEATS4_ENST00000548020_chr12_69783927_+_170nt
TTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAGCTTTGAGATTGCAGAGCTTAAGGAGAGATTAA


* Fusion transcript sequences (Full-length transcript).
>In-frame_TMTC1_ENST00000256062_chr12_29709790_-_YEATS4_ENST00000247843_chr12_69783927_+_2476nt
AGATAGAAAAAGTAGTTTGCTTGGCATCTCCCAAATTATCTTGAGCAAACAATAAAATAAGAAATGTTTCAGAAGACAATTCGGCTCCCA
GGCCCAAACCAAAACTCGAACCTGGTACTTTTTGTAAGTGCGGGCCAAGAAAGGGGCTGTAAAGTTAAAGAGCCGGTGGCGCCTCTGAAC
ACACCCGGGCAGGGCGAGCAGGATGTCCTTGTCCAGGGAGACCCCTTCTCCTGGCTTTGAGGAAGGTGCTCCCTATCCCCGCGGGTTCCT
CCGCCAAGCGGGACGCCGCGCCGGGCGGGTGAGAGAAAGCCCGGGCAGGAGAGCACAGAGCCGGCGACTGGACGCGAGCGCGGGGCGGGT
GGAGAGCGTCTCTCCGGGCGCCGCTGCTGTTGTCCCGGGTGCTGAAAAGCCGGGAACTTCCCGGGAAGCAGCGGCACTTTTCTCCCTGGA
AGGCTAAACATATTTTTGACTGGTATGAACCCATTCTACTTTCATGCAGTAAATATAATTTTACACTGCTTAGTGACTCTTGTGCTGATG
TACACCTGTGATAAAACTGTCTTCAAGAATCGTGGACTTGCTTTTGTAACGGCATTGCTTTTTGCTGTACATCCTATTCATACTGAGGCG
GTGGCTGGGATCGTTGGCAGAGCGGACGTGTTAGCGTGTCTGCTGTTTCTATTGGCCTTTCTCTCGTACAACAGGAGTCTGGATCAGGGC
TGTGTTGGGGGAAGTTTCCCTTCCACGGTGTCTCCCTTCTTCTTGCTGCTCAGTTTGTTTCTGGGGACCTGTGCGATGCTGGTGAAAGAG
ACAGGCATCACGGTGTTTGGAGTGTGCTTGGTTTATGACCTCTTTTCCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGT
CCACGCAGCCCACAGCAGCCCGGGAGCCCCCAGCCCTCCTCACTGCCAGGCCATCCTCACCGGGAGAATGGGAAGCAGCAGCGGTTCCCT
CACAAAGGAGCTTGGGGTGGCTGCCACTCTCCACTGCCACCAGAACCCAAGAGCAGTGGATTCCCAGTGTCCCCACGAGCTGTGTGGTCC
ATGATGAGATTCCTCACCTATTCCTACCTCTTGGCCTTCAATGTGTGGCTTCTGCTTGCACCCGTGACCCTGTGCTATGACTGGCAGGTC
GGCAGTATTCCTCTGGTAGAGACCATATGGGACATGCGGAACTTAGCCACCATCTTTCTGGCGGTTGTGATGGCCTTATTGAGCCTGCAC
TGCTTAGCAGCCTTTAAGAGACTGGAGCACAAGGAGGTTTTAGTCGGCTTGTTGTTCCTGGTGTTCCCGTTCATTCCAGCCAGCAACCTC
TTCTTCAGGGTGGGTTTTGTGGTGGCGGAGAGAGTCCTTTACATGCCTAGCATGGGCTACTGCATCCTTTTTGTGCATGGACTGAGCAAG
CTCTGCACTTGGCTGAATCGATGTGGGGCCACCACCCTGATTGTGTCCACTGTGTTGCTGCTGTTGCTTTTCTCTTGGAAAACTGTGAAA
CAGAATGAAATTTGGCTGTCAAGAGAGTCCCTATTCAGGTCTGGAGTTCAAACTCTGCCCCACAATGCCAAGGTTCACTACAACTATGCC
AATTTCCTGAAGGACCAAGGTCGGAACAAGGAAGCGATCTACCACTACAGAACAGCTCTCAAGTTGTATCCACGCCATGCAAGTGCGCTC
AACAACCTTGGAACACTGACGAGAGACACAGCAGAGGCAAAGATGTACTATCAGAGGGCTCTCCAGCTCCATCCACAGCATAACCGGGCT
CTTTTCAATCTGGGGAATCTCCTCAATTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAGCTTTGA
GATTGCAGAGCTTAAGGAGAGATTAAAAGCAAGTCGTGAAACTATAAATTGTTTAAAAAATGAAATCAGAAAACTTGAAGAAGATGACCA
AGCAAAAGACATATAAACAGTTCTCATGAGAACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTG
CAAATGCTGTGATGTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAGGAATTTGTACTATTTAAGCAATC
TTTAATGGAAAATATGTGTGTAAGAATGGATGCTATATAGGTATTTTACCAACCCATTTTAAGAAAATTCTATGATATTAAGCACAGTTT
TTAAAAATGTTTATTGTAGTATATGTATAGCTTATTACCCTTTTGACAGGCATCAAAATTTCATTATAAAGTATTACTTGTACAAATTTT
GTACTTCTTTAGTGGCTAGAATTAGTGAAGAAACTTAATGTGTATATTTAATTTCTTCAAGTTCTTACCTGCCCCCATCCTTTTTTGTAT

>In-frame_TMTC1_ENST00000256062_chr12_29709790_-_YEATS4_ENST00000548020_chr12_69783927_+_2311nt
AGATAGAAAAAGTAGTTTGCTTGGCATCTCCCAAATTATCTTGAGCAAACAATAAAATAAGAAATGTTTCAGAAGACAATTCGGCTCCCA
GGCCCAAACCAAAACTCGAACCTGGTACTTTTTGTAAGTGCGGGCCAAGAAAGGGGCTGTAAAGTTAAAGAGCCGGTGGCGCCTCTGAAC
ACACCCGGGCAGGGCGAGCAGGATGTCCTTGTCCAGGGAGACCCCTTCTCCTGGCTTTGAGGAAGGTGCTCCCTATCCCCGCGGGTTCCT
CCGCCAAGCGGGACGCCGCGCCGGGCGGGTGAGAGAAAGCCCGGGCAGGAGAGCACAGAGCCGGCGACTGGACGCGAGCGCGGGGCGGGT
GGAGAGCGTCTCTCCGGGCGCCGCTGCTGTTGTCCCGGGTGCTGAAAAGCCGGGAACTTCCCGGGAAGCAGCGGCACTTTTCTCCCTGGA
AGGCTAAACATATTTTTGACTGGTATGAACCCATTCTACTTTCATGCAGTAAATATAATTTTACACTGCTTAGTGACTCTTGTGCTGATG
TACACCTGTGATAAAACTGTCTTCAAGAATCGTGGACTTGCTTTTGTAACGGCATTGCTTTTTGCTGTACATCCTATTCATACTGAGGCG
GTGGCTGGGATCGTTGGCAGAGCGGACGTGTTAGCGTGTCTGCTGTTTCTATTGGCCTTTCTCTCGTACAACAGGAGTCTGGATCAGGGC
TGTGTTGGGGGAAGTTTCCCTTCCACGGTGTCTCCCTTCTTCTTGCTGCTCAGTTTGTTTCTGGGGACCTGTGCGATGCTGGTGAAAGAG
ACAGGCATCACGGTGTTTGGAGTGTGCTTGGTTTATGACCTCTTTTCCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGT
CCACGCAGCCCACAGCAGCCCGGGAGCCCCCAGCCCTCCTCACTGCCAGGCCATCCTCACCGGGAGAATGGGAAGCAGCAGCGGTTCCCT
CACAAAGGAGCTTGGGGTGGCTGCCACTCTCCACTGCCACCAGAACCCAAGAGCAGTGGATTCCCAGTGTCCCCACGAGCTGTGTGGTCC
ATGATGAGATTCCTCACCTATTCCTACCTCTTGGCCTTCAATGTGTGGCTTCTGCTTGCACCCGTGACCCTGTGCTATGACTGGCAGGTC
GGCAGTATTCCTCTGGTAGAGACCATATGGGACATGCGGAACTTAGCCACCATCTTTCTGGCGGTTGTGATGGCCTTATTGAGCCTGCAC
TGCTTAGCAGCCTTTAAGAGACTGGAGCACAAGGAGGTTTTAGTCGGCTTGTTGTTCCTGGTGTTCCCGTTCATTCCAGCCAGCAACCTC
TTCTTCAGGGTGGGTTTTGTGGTGGCGGAGAGAGTCCTTTACATGCCTAGCATGGGCTACTGCATCCTTTTTGTGCATGGACTGAGCAAG
CTCTGCACTTGGCTGAATCGATGTGGGGCCACCACCCTGATTGTGTCCACTGTGTTGCTGCTGTTGCTTTTCTCTTGGAAAACTGTGAAA
CAGAATGAAATTTGGCTGTCAAGAGAGTCCCTATTCAGGTCTGGAGTTCAAACTCTGCCCCACAATGCCAAGGTTCACTACAACTATGCC
AATTTCCTGAAGGACCAAGGTCGGAACAAGGAAGCGATCTACCACTACAGAACAGCTCTCAAGTTGTATCCACGCCATGCAAGTGCGCTC
AACAACCTTGGAACACTGACGAGAGACACAGCAGAGGCAAAGATGTACTATCAGAGGGCTCTCCAGCTCCATCCACAGCATAACCGGGCT
CTTTTCAATCTGGGGAATCTCCTCAATTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAGCTTTGA
GATTGCAGAGCTTAAGGAGAGATTAAAAGCAAGTCGTGAAACTATAAATTGTTTAAAAAATGAAATCAGAAAACTTGAAGAAGATGACCA
AGCAAAAGACATATAAACAGTTCTCATGAGAACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGACTTACTG
CAAATGCTGTGATGTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAGGAATTTGTACTATTTAAGCAATC
TTTAATGGAAAATATGTGTGTAAGAATGGATGCTATATAGGTATTTTACCAACCCATTTTAAGAAAATTCTATGATATTAAGCACAGTTT

>In-frame_TMTC1_ENST00000381224_chr12_29709790_-_YEATS4_ENST00000247843_chr12_69783927_+_2662nt
AGATAGAAAAAGTAGTTTGCTTGGCATCTCCCAAATTATCTTGAGCAAACAATAAAATAAGAAATGTTTCAGAAGACAATTCGGCTCCCA
GGCCCAAACCAAAACTCGAACCTGGTACTTTTTGTAAGTGCGGGCCAAGAAAGGGGCTGTAAAGTTAAAGAGCCGGTGGCGCCTCTGAAC
ACACCCGGGCAGGGCGAGCAGGATGTCCTTGTCCAGGGAGACCCCTTCTCCTGGCTTTGAGGAAGGTGCTCCCTATCCCCGCGGGTTCCT
CCGCCAAGCGGGACGCCGCGCCGGGCGGGTGAGAGAAAGCCCGGGCAGGAGAGCACAGAGCCGGCGACTGGACGCGAGCGCGGGGCGGGT
GGAGAGCGTCTCTCCGGGCGCCGCTGCTGTTGTCCCGGGTGCTGAAAAGCCGGGAACTTCCCGGGAAGCAGCGGCACTTTTCTCCCTGGA
AGGCTAAACATATTTTTGACTGGTATGAACCCATTCTACTTTCATGCAGTAAATATAATTTTACACTGCTTAGTGACTCTTGTGCTGATG
TACACCTGTGATAAAACTGTCTTCAAGAATCGTGGACTTGCTTTTGTAACGGCATTGCTTTTTGCTGTACATCCTATTCATACTGAGGCG
GTGGCTGGGATCGTTGGCAGAGCGGACGTGTTAGCGTGTCTGCTGTTTCTATTGGCCTTTCTCTCGTACAACAGGAGTCTGGATCAGGGC
TGTGTTGGGGGAAGTTTCCCTTCCACGGTGTCTCCCTTCTTCTTGCTGCTCAGTTTGTTTCTGGGGACCTGTGCGATGCTGGTGAAAGAG
ACAGGCATCACGGTGTTTGGAGTGTGCTTGGTTTATGACCTCTTTTCCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGT
CCACGCAGCCCACAGCAGCCCGGGAGCCCCCAGCCCTCCTCACTGCCAGGCCATCCTCACCGGGAGAATGGGAAGCAGCAGCGGTTCCCT
CACAAAGGAGCTTGGGGTGGCTGCCACTCTCCACTGCCACCAGAACCCAAGAGCAGTGGATTCCCAGTGTCCCCACGAGCTGTGTGGTCC
ATGATGAGGTATCTGAGAGCAAGCAGCAATAGAAATTTCCTGCTTACCATGAGACCATTTTTAAAAAGGGCCATTTTGGTCCTAAGTTAT
GTGCTTGTCATTTTGTACTTCCGTCTGTGGATAATGGGAGGATCTATGCCCCTCTTTTCAGAGCAGGATAATCCAGCTTCATTTTCGCCT
TACATTCTTACGAGATTCCTCACCTATTCCTACCTCTTGGCCTTCAATGTGTGGCTTCTGCTTGCACCCGTGACCCTGTGCTATGACTGG
CAGGTCGGCAGTATTCCTCTGGTAGAGACCATATGGGACATGCGGAACTTAGCCACCATCTTTCTGGCGGTTGTGATGGCCTTATTGAGC
CTGCACTGCTTAGCAGCCTTTAAGAGACTGGAGCACAAGGAGGTTTTAGTCGGCTTGTTGTTCCTGGTGTTCCCGTTCATTCCAGCCAGC
AACCTCTTCTTCAGGGTGGGTTTTGTGGTGGCGGAGAGAGTCCTTTACATGCCTAGCATGGGCTACTGCATCCTTTTTGTGCATGGACTG
AGCAAGCTCTGCACTTGGCTGAATCGATGTGGGGCCACCACCCTGATTGTGTCCACTGTGTTGCTGCTGTTGCTTTTCTCTTGGAAAACT
GTGAAACAGAATGAAATTTGGCTGTCAAGAGAGTCCCTATTCAGGTCTGGAGTTCAAACTCTGCCCCACAATGCCAAGGTTCACTACAAC
TATGCCAATTTCCTGAAGGACCAAGGTCGGAACAAGGAAGCGATCTACCACTACAGAACAGCTCTCAAGTTGTATCCACGCCATGCAAGT
GCGCTCAACAACCTTGGAACACTGACGAGAGACACAGCAGAGGCAAAGATGTACTATCAGAGGGCTCTCCAGCTCCATCCACAGCATAAC
CGGGCTCTTTTCAATCTGGGGAATCTCCTCAATTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAG
CTTTGAGATTGCAGAGCTTAAGGAGAGATTAAAAGCAAGTCGTGAAACTATAAATTGTTTAAAAAATGAAATCAGAAAACTTGAAGAAGA
TGACCAAGCAAAAGACATATAAACAGTTCTCATGAGAACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGAC
TTACTGCAAATGCTGTGATGTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAGGAATTTGTACTATTTAA
GCAATCTTTAATGGAAAATATGTGTGTAAGAATGGATGCTATATAGGTATTTTACCAACCCATTTTAAGAAAATTCTATGATATTAAGCA
CAGTTTTTAAAAATGTTTATTGTAGTATATGTATAGCTTATTACCCTTTTGACAGGCATCAAAATTTCATTATAAAGTATTACTTGTACA
AATTTTGTACTTCTTTAGTGGCTAGAATTAGTGAAGAAACTTAATGTGTATATTTAATTTCTTCAAGTTCTTACCTGCCCCCATCCTTTT

>In-frame_TMTC1_ENST00000381224_chr12_29709790_-_YEATS4_ENST00000548020_chr12_69783927_+_2497nt
AGATAGAAAAAGTAGTTTGCTTGGCATCTCCCAAATTATCTTGAGCAAACAATAAAATAAGAAATGTTTCAGAAGACAATTCGGCTCCCA
GGCCCAAACCAAAACTCGAACCTGGTACTTTTTGTAAGTGCGGGCCAAGAAAGGGGCTGTAAAGTTAAAGAGCCGGTGGCGCCTCTGAAC
ACACCCGGGCAGGGCGAGCAGGATGTCCTTGTCCAGGGAGACCCCTTCTCCTGGCTTTGAGGAAGGTGCTCCCTATCCCCGCGGGTTCCT
CCGCCAAGCGGGACGCCGCGCCGGGCGGGTGAGAGAAAGCCCGGGCAGGAGAGCACAGAGCCGGCGACTGGACGCGAGCGCGGGGCGGGT
GGAGAGCGTCTCTCCGGGCGCCGCTGCTGTTGTCCCGGGTGCTGAAAAGCCGGGAACTTCCCGGGAAGCAGCGGCACTTTTCTCCCTGGA
AGGCTAAACATATTTTTGACTGGTATGAACCCATTCTACTTTCATGCAGTAAATATAATTTTACACTGCTTAGTGACTCTTGTGCTGATG
TACACCTGTGATAAAACTGTCTTCAAGAATCGTGGACTTGCTTTTGTAACGGCATTGCTTTTTGCTGTACATCCTATTCATACTGAGGCG
GTGGCTGGGATCGTTGGCAGAGCGGACGTGTTAGCGTGTCTGCTGTTTCTATTGGCCTTTCTCTCGTACAACAGGAGTCTGGATCAGGGC
TGTGTTGGGGGAAGTTTCCCTTCCACGGTGTCTCCCTTCTTCTTGCTGCTCAGTTTGTTTCTGGGGACCTGTGCGATGCTGGTGAAAGAG
ACAGGCATCACGGTGTTTGGAGTGTGCTTGGTTTATGACCTCTTTTCCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGT
CCACGCAGCCCACAGCAGCCCGGGAGCCCCCAGCCCTCCTCACTGCCAGGCCATCCTCACCGGGAGAATGGGAAGCAGCAGCGGTTCCCT
CACAAAGGAGCTTGGGGTGGCTGCCACTCTCCACTGCCACCAGAACCCAAGAGCAGTGGATTCCCAGTGTCCCCACGAGCTGTGTGGTCC
ATGATGAGGTATCTGAGAGCAAGCAGCAATAGAAATTTCCTGCTTACCATGAGACCATTTTTAAAAAGGGCCATTTTGGTCCTAAGTTAT
GTGCTTGTCATTTTGTACTTCCGTCTGTGGATAATGGGAGGATCTATGCCCCTCTTTTCAGAGCAGGATAATCCAGCTTCATTTTCGCCT
TACATTCTTACGAGATTCCTCACCTATTCCTACCTCTTGGCCTTCAATGTGTGGCTTCTGCTTGCACCCGTGACCCTGTGCTATGACTGG
CAGGTCGGCAGTATTCCTCTGGTAGAGACCATATGGGACATGCGGAACTTAGCCACCATCTTTCTGGCGGTTGTGATGGCCTTATTGAGC
CTGCACTGCTTAGCAGCCTTTAAGAGACTGGAGCACAAGGAGGTTTTAGTCGGCTTGTTGTTCCTGGTGTTCCCGTTCATTCCAGCCAGC
AACCTCTTCTTCAGGGTGGGTTTTGTGGTGGCGGAGAGAGTCCTTTACATGCCTAGCATGGGCTACTGCATCCTTTTTGTGCATGGACTG
AGCAAGCTCTGCACTTGGCTGAATCGATGTGGGGCCACCACCCTGATTGTGTCCACTGTGTTGCTGCTGTTGCTTTTCTCTTGGAAAACT
GTGAAACAGAATGAAATTTGGCTGTCAAGAGAGTCCCTATTCAGGTCTGGAGTTCAAACTCTGCCCCACAATGCCAAGGTTCACTACAAC
TATGCCAATTTCCTGAAGGACCAAGGTCGGAACAAGGAAGCGATCTACCACTACAGAACAGCTCTCAAGTTGTATCCACGCCATGCAAGT
GCGCTCAACAACCTTGGAACACTGACGAGAGACACAGCAGAGGCAAAGATGTACTATCAGAGGGCTCTCCAGCTCCATCCACAGCATAAC
CGGGCTCTTTTCAATCTGGGGAATCTCCTCAATTGCAGAGCTTGAAGTGAAAACCAGAGAAAAATTAGAAGCTGCTAAGAAAAAAACAAG
CTTTGAGATTGCAGAGCTTAAGGAGAGATTAAAAGCAAGTCGTGAAACTATAAATTGTTTAAAAAATGAAATCAGAAAACTTGAAGAAGA
TGACCAAGCAAAAGACATATAAACAGTTCTCATGAGAACTTGGTAGTAAGCTAAACTGAAAATAAGGTGGGCTTCACTGGAGAAATGGAC
TTACTGCAAATGCTGTGATGTTTCTTAGAGGAACTTCATATACAGCTGTTGACCATGAATTTCTTAGCAATAGGAATTTGTACTATTTAA
GCAATCTTTAATGGAAAATATGTGTGTAAGAATGGATGCTATATAGGTATTTTACCAACCCATTTTAAGAAAATTCTATGATATTAAGCA


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FusionGenePPI for TMTC1_YEATS4


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
TMTC1ZDHHC17, DPPA4, BCORYEATS4TACC1, TACC2, NUMA1, CEP162, PFDN1, MLLT10, SMARCB1, ING3, RUVBL2, RUVBL1, MRGBP, KAT5, DMAP1, H2AFZ, MYCN, KDM1A, FRMD4A, RNF8, MYC, VIM, UBTF, BRD3, TFAP2B, LYN, HECW2, PLAC1, FOXR1, FOXR2, MORF4L1, FOSL2, FOS, GRAMD3, HIST1H2BA, EP400, FUS, MEAF6, EPC1, EPC2, SRCAP, TRRAP, BRD8, VPS72, SUGP1, HDGFRP2, MYO18A, SNX16, ACTL6B, MBTD1, UPF3B, ACTR6, GABPA, WEE1, MORF4L2, JAZF1, ZNHIT1, C12orf43, FBXO34, AGGF1, LENG1, POLDIP3, ANP32A, HIST1H2BG, MED23, XPO1, ACTL6A, COX6B1, ECHS1, FANCD2, MTOR, JUP, KRT2, KRT5, MLLT6, NFKBIE, PPM1G, S100A6, ATXN2, STIL, PTTG1, SNUPN, ZNF292, POLE3, WHSC1L1, PRPF40A, ZNF687, TSPYL2, KLF16, DOT1L, MICALL1, GPRIN1, CDYL2, PTGR2, EME1, ESCO2, REEP3, KPRP, MAX, FOXO6, POU5F1, MTMR7, PPP2R2D, TPH1, MYCL, P4HA3, ACTBL2, PKN3, NCKAP5L, TFPT, CCHCR1, TUFT1, RABGAP1L, GOLGA5, CLOCK, PSMD9, VPS53, DZIP3, GRIPAP1, RCOR1, HMG20A, CCDC132, GIT2, CCDC93, OIP5, PHF21A, PTRF, PHLDB3, HAUS6, RPRD1A, ARNTL, RABGEF1, NUF2, THAP11, VPS51, TSSC1, RABEP1, STRN


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
TgeneYEATS4chr12:29709790chr12:69783927ENST00000247843+57168_227171228TACC1


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
TgeneYEATS4chr12:29709790chr12:69783927ENST00000247843+57163_227171228MLLT10


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for TMTC1_YEATS4


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TMTC1_YEATS4


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneYEATS4C0023827liposarcoma1CTD_human