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Fusion gene ID: 38765 |
FusionGeneSummary for TMPRSS2_PHF12 |
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Fusion gene information | Fusion gene name: TMPRSS2_PHF12 | Fusion gene ID: 38765 | Hgene | Tgene | Gene symbol | TMPRSS2 | PHF12 | Gene ID | 7113 | 57649 |
Gene name | transmembrane serine protease 2 | PHD finger protein 12 | |
Synonyms | PP9284|PRSS10 | PF1 | |
Cytomap | 21q22.3 | 17q11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | transmembrane protease serine 2epitheliasinserine protease 10transmembrane protease, serine 2 | PHD finger protein 12PHD factor 1PHD zinc finger transcription factor | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | O15393 | Q96QT6 | |
Ensembl transtripts involved in fusion gene | ENST00000332149, ENST00000398585, ENST00000458356, ENST00000497881, | ENST00000332830, ENST00000577226, ENST00000268756, ENST00000582655, | |
Fusion gene scores | * DoF score | 29 X 21 X 6=3654 | 7 X 6 X 5=210 |
# samples | 228 | 8 | |
** MAII score | log2(228/3654*10)=-0.680442809575384 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/210*10)=-1.39231742277876 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TMPRSS2 [Title/Abstract] AND PHF12 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TMPRSS2 | GO:0006508 | proteolysis | 21068237|24227843 |
Hgene | TMPRSS2 | GO:0046598 | positive regulation of viral entry into host cell | 21068237|24227843 |
Tgene | PHF12 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 22048773 |
Tgene | PHF12 | GO:0045892 | negative regulation of transcription, DNA-templated | 11390640 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LIHC | TCGA-G3-AAUZ-01A | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000332149 | ENST00000332830 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-3UTR | ENST00000332149 | ENST00000577226 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-intron | ENST00000332149 | ENST00000268756 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-intron | ENST00000332149 | ENST00000582655 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
In-frame | ENST00000398585 | ENST00000332830 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-3UTR | ENST00000398585 | ENST00000577226 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-intron | ENST00000398585 | ENST00000268756 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-intron | ENST00000398585 | ENST00000582655 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
Frame-shift | ENST00000458356 | ENST00000332830 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-3UTR | ENST00000458356 | ENST00000577226 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-intron | ENST00000458356 | ENST00000268756 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
5CDS-intron | ENST00000458356 | ENST00000582655 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
intron-3CDS | ENST00000497881 | ENST00000332830 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
intron-3UTR | ENST00000497881 | ENST00000577226 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
intron-intron | ENST00000497881 | ENST00000268756 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
intron-intron | ENST00000497881 | ENST00000582655 | TMPRSS2 | chr21 | 42860321 | - | PHF12 | chr17 | 27235899 | - |
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FusionProtFeatures for TMPRSS2_PHF12 |
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Hgene | Tgene |
TMPRSS2 | PHF12 |
Serine protease that proteolytically cleaves andactivates the viral spike glycoproteins which facilitate virus-cell membrane fusions; spike proteins are synthesized andmaintained in precursor intermediate folding states andproteolysis permits the refolding and energy release required tocreate stable virus-cell linkages and membrane coalescence.Facilitates human SARS coronavirus (SARS-CoV) infection via twoindependent mechanisms, proteolytic cleavage of ACE2, which mightpromote viral uptake, and cleavage of coronavirus spikeglycoprotein which activates the glycoprotein for cathepsin L-independent host cell entry. Proteolytically cleaves and activatesthe spike glycoproteins of human coronavirus 229E (HCoV-229E) andhuman coronavirus EMC (HCoV-EMC) and the fusion glycoproteins F0of Sendai virus (SeV), human metapneumovirus (HMPV), humanparainfluenza 1, 2, 3, 4a and 4b viruses (HPIV). Essential forspread and pathogenesis of influenza A virus (strains H1N1, H3N2and H7N9); involved in proteolytic cleavage and activation ofhemagglutinin (HA) protein which is essential for viralinfectivity. {ECO:0000269|PubMed:21068237,ECO:0000269|PubMed:21325420, ECO:0000269|PubMed:23536651,ECO:0000269|PubMed:23966399, ECO:0000269|PubMed:24027332,ECO:0000269|PubMed:24227843}. | Acts as a transcriptional repressor. Involved inrecruitment of functional SIN3A complexes to DNA. Repressestranscription at least in part through the activity of anassociated histone deacetylase (HDAC). May also represstranscription in a SIN3A-independent manner through recruitment offunctional AES complexes to DNA. {ECO:0000269|PubMed:11390640,ECO:0000303|PubMed:11390640}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000332149 | - | 5 | 14 | 112_149 | 148 | 493 | Domain | LDL-receptor class A |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000398585 | - | 5 | 14 | 112_149 | 185 | 530 | Domain | LDL-receptor class A |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000458356 | - | 5 | 14 | 112_149 | 148 | 493 | Domain | LDL-receptor class A |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000332149 | - | 5 | 14 | 1_84 | 148 | 493 | Topological domain | Cytoplasmic |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000398585 | - | 5 | 14 | 1_84 | 185 | 530 | Topological domain | Cytoplasmic |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000458356 | - | 5 | 14 | 1_84 | 148 | 493 | Topological domain | Cytoplasmic |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000332149 | - | 5 | 14 | 85_105 | 148 | 493 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000398585 | - | 5 | 14 | 85_105 | 185 | 530 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Hgene | TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000458356 | - | 5 | 14 | 85_105 | 148 | 493 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 894_897 | -177 | 705 | Compositional bias | Poly-Arg |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 929_932 | -177 | 705 | Compositional bias | Poly-Ser |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 894_897 | 786 | 1005 | Compositional bias | Poly-Arg |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 929_932 | 786 | 1005 | Compositional bias | Poly-Ser |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 815_869 | -177 | 705 | Domain | FHA |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 815_869 | 786 | 1005 | Domain | FHA |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 105_128 | -177 | 705 | Region | Note=PBR |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 271_321 | -177 | 705 | Zinc finger | PHD-type 2%3B atypical |
Tgene | >PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 56_105 | -177 | 705 | Zinc finger | PHD-type 1 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000332149 | - | 5 | 14 | 150_242 | 148 | 493 | Domain | SRCR |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000332149 | - | 5 | 14 | 256_489 | 148 | 493 | Domain | Peptidase S1 |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000398585 | - | 5 | 14 | 150_242 | 185 | 530 | Domain | SRCR |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000398585 | - | 5 | 14 | 256_489 | 185 | 530 | Domain | Peptidase S1 |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000458356 | - | 5 | 14 | 150_242 | 148 | 493 | Domain | SRCR |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000458356 | - | 5 | 14 | 256_489 | 148 | 493 | Domain | Peptidase S1 |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000332149 | - | 5 | 14 | 106_492 | 148 | 493 | Topological domain | Extracellular |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000398585 | - | 5 | 14 | 106_492 | 185 | 530 | Topological domain | Extracellular |
Hgene | >TMPRSS2 | chr21:42860321 | chr17:27235899 | ENST00000458356 | - | 5 | 14 | 106_492 | 148 | 493 | Topological domain | Extracellular |
Tgene | PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 105_128 | 786 | 1005 | Region | Note=PBR |
Tgene | PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 271_321 | 786 | 1005 | Zinc finger | PHD-type 2%3B atypical |
Tgene | PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 56_105 | 786 | 1005 | Zinc finger | PHD-type 1 |
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FusionGeneSequence for TMPRSS2_PHF12 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_TMPRSS2_ENST00000332149_chr21_42860321_-_PHF12_ENST00000332830_chr17_27235899_-_367aa MALNSGSPPAIGPYYENHGYQPENPYPAQPTVVPTVYEVHPAQYYPSPVPQYAPRVLTQASNPVVCTQPKSPSGTVCTSKTKKALCITLT LGTFLVGAALAAGLLWKFMGSKCSNSGIECDSSGTCINPSNWCDGVSHCPGGEDENRCVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIG TGADMDVCLTNYGHCNYVSGKHACIFYDENTKHYELLNYSEHGTTVDNVLYSCDFSEKTPPTPPSSIVAKVQSVIRRRRHQKQDEEPSEE AAMMSSQAQGPQRRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQFVFSITEFATKQPKGDASLLQDGVLAEKLSLKPHQGPVL >In-frame_TMPRSS2_ENST00000398585_chr21_42860321_-_PHF12_ENST00000332830_chr17_27235899_-_404aa MPPAPPGGESGCEERGAAGHIEHSRYLSLLDAVDNSKMALNSGSPPAIGPYYENHGYQPENPYPAQPTVVPTVYEVHPAQYYPSPVPQYA PRVLTQASNPVVCTQPKSPSGTVCTSKTKKALCITLTLGTFLVGAALAAGLLWKFMGSKCSNSGIECDSSGTCINPSNWCDGVSHCPGGE DENRCVQRKEVQARAVFYPLLGLGGAVNMCYRTLYIGTGADMDVCLTNYGHCNYVSGKHACIFYDENTKHYELLNYSEHGTTVDNVLYSC DFSEKTPPTPPSSIVAKVQSVIRRRRHQKQDEEPSEEAAMMSSQAQGPQRRPCNCKASSSSLIGGSGAGWEGTALLHHGSYIKLGCLQFV |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_TMPRSS2_ENST00000332149_chr21_42860321_-_PHF12_ENST00000332830_chr17_27235899_-_1101nt ATGGCTTTGAACTCAGGGTCACCACCAGCTATTGGACCTTACTATGAAAACCATGGATACCAACCGGAAAACCCCTATCCCGCACAGCCC ACTGTGGTCCCCACTGTCTACGAGGTGCATCCGGCTCAGTACTACCCGTCCCCCGTGCCCCAGTACGCCCCGAGGGTCCTGACGCAGGCT TCCAACCCCGTCGTCTGCACGCAGCCCAAATCCCCATCCGGGACAGTGTGCACCTCAAAGACTAAGAAAGCACTGTGCATCACCTTGACC CTGGGGACCTTCCTCGTGGGAGCTGCGCTGGCCGCTGGCCTACTCTGGAAGTTCATGGGCAGCAAGTGCTCCAACTCTGGGATAGAGTGC GACTCCTCAGGTACCTGCATCAACCCCTCTAACTGGTGTGATGGCGTGTCACACTGCCCCGGCGGGGAGGACGAGAATCGGTGTGTGCAA AGAAAGGAGGTACAGGCCCGAGCTGTGTTCTACCCCCTCTTAGGGTTGGGAGGAGCTGTGAACATGTGCTATCGAACCCTCTACATCGGG ACAGGAGCTGACATGGATGTGTGCCTTACAAACTATGGTCACTGTAACTACGTGTCCGGGAAACATGCCTGCATATTCTACGATGAGAAT ACCAAACATTATGAGCTGTTAAACTACAGTGAGCATGGGACAACGGTGGACAATGTGCTGTATTCATGTGACTTCTCGGAGAAGACCCCG CCAACCCCCCCAAGCAGTATTGTTGCCAAAGTGCAGAGTGTCATCAGGCGCCGCCGGCACCAGAAACAGGACGAAGAGCCAAGTGAGGAG GCAGCCATGATGAGTTCCCAGGCCCAGGGGCCGCAGCGGAGACCCTGCAATTGCAAAGCCAGCAGCTCGAGCTTGATTGGGGGCAGTGGG GCCGGCTGGGAGGGCACAGCCTTACTGCACCATGGCAGCTACATCAAGCTGGGCTGCCTGCAGTTTGTCTTCAGCATCACTGAGTTTGCG ACCAAACAGCCCAAAGGCGATGCCAGCCTGCTGCAGGATGGGGTCTTGGCCGAGAAGCTCTCTCTCAAGCCCCACCAGGGCCCTGTGCTG >In-frame_TMPRSS2_ENST00000398585_chr21_42860321_-_PHF12_ENST00000332830_chr17_27235899_-_1212nt ATGCCCCCTGCCCCGCCCGGAGGTGAAAGCGGGTGTGAGGAGCGCGGCGCGGCAGGTCATATTGAACATTCCAGATACCTATCATTACTC GATGCTGTTGATAACAGCAAGATGGCTTTGAACTCAGGGTCACCACCAGCTATTGGACCTTACTATGAAAACCATGGATACCAACCGGAA AACCCCTATCCCGCACAGCCCACTGTGGTCCCCACTGTCTACGAGGTGCATCCGGCTCAGTACTACCCGTCCCCCGTGCCCCAGTACGCC CCGAGGGTCCTGACGCAGGCTTCCAACCCCGTCGTCTGCACGCAGCCCAAATCCCCATCCGGGACAGTGTGCACCTCAAAGACTAAGAAA GCACTGTGCATCACCTTGACCCTGGGGACCTTCCTCGTGGGAGCTGCGCTGGCCGCTGGCCTACTCTGGAAGTTCATGGGCAGCAAGTGC TCCAACTCTGGGATAGAGTGCGACTCCTCAGGTACCTGCATCAACCCCTCTAACTGGTGTGATGGCGTGTCACACTGCCCCGGCGGGGAG GACGAGAATCGGTGTGTGCAAAGAAAGGAGGTACAGGCCCGAGCTGTGTTCTACCCCCTCTTAGGGTTGGGAGGAGCTGTGAACATGTGC TATCGAACCCTCTACATCGGGACAGGAGCTGACATGGATGTGTGCCTTACAAACTATGGTCACTGTAACTACGTGTCCGGGAAACATGCC TGCATATTCTACGATGAGAATACCAAACATTATGAGCTGTTAAACTACAGTGAGCATGGGACAACGGTGGACAATGTGCTGTATTCATGT GACTTCTCGGAGAAGACCCCGCCAACCCCCCCAAGCAGTATTGTTGCCAAAGTGCAGAGTGTCATCAGGCGCCGCCGGCACCAGAAACAG GACGAAGAGCCAAGTGAGGAGGCAGCCATGATGAGTTCCCAGGCCCAGGGGCCGCAGCGGAGACCCTGCAATTGCAAAGCCAGCAGCTCG AGCTTGATTGGGGGCAGTGGGGCCGGCTGGGAGGGCACAGCCTTACTGCACCATGGCAGCTACATCAAGCTGGGCTGCCTGCAGTTTGTC TTCAGCATCACTGAGTTTGCGACCAAACAGCCCAAAGGCGATGCCAGCCTGCTGCAGGATGGGGTCTTGGCCGAGAAGCTCTCTCTCAAG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_TMPRSS2_ENST00000332149_chr21_42860321_-_PHF12_ENST00000332830_chr17_27235899_-_2169nt CGAGTAGGCGCGAGCTAAGCAGGAGGCGGAGGCGGAGGCGGAGGGCGAGGGGCGGGGAGCGCCGCCTGGAGCGCGGCAGGTCATATTGAA CATTCCAGATACCTATCATTACTCGATGCTGTTGATAACAGCAAGATGGCTTTGAACTCAGGGTCACCACCAGCTATTGGACCTTACTAT GAAAACCATGGATACCAACCGGAAAACCCCTATCCCGCACAGCCCACTGTGGTCCCCACTGTCTACGAGGTGCATCCGGCTCAGTACTAC CCGTCCCCCGTGCCCCAGTACGCCCCGAGGGTCCTGACGCAGGCTTCCAACCCCGTCGTCTGCACGCAGCCCAAATCCCCATCCGGGACA GTGTGCACCTCAAAGACTAAGAAAGCACTGTGCATCACCTTGACCCTGGGGACCTTCCTCGTGGGAGCTGCGCTGGCCGCTGGCCTACTC TGGAAGTTCATGGGCAGCAAGTGCTCCAACTCTGGGATAGAGTGCGACTCCTCAGGTACCTGCATCAACCCCTCTAACTGGTGTGATGGC GTGTCACACTGCCCCGGCGGGGAGGACGAGAATCGGTGTGTGCAAAGAAAGGAGGTACAGGCCCGAGCTGTGTTCTACCCCCTCTTAGGG TTGGGAGGAGCTGTGAACATGTGCTATCGAACCCTCTACATCGGGACAGGAGCTGACATGGATGTGTGCCTTACAAACTATGGTCACTGT AACTACGTGTCCGGGAAACATGCCTGCATATTCTACGATGAGAATACCAAACATTATGAGCTGTTAAACTACAGTGAGCATGGGACAACG GTGGACAATGTGCTGTATTCATGTGACTTCTCGGAGAAGACCCCGCCAACCCCCCCAAGCAGTATTGTTGCCAAAGTGCAGAGTGTCATC AGGCGCCGCCGGCACCAGAAACAGGACGAAGAGCCAAGTGAGGAGGCAGCCATGATGAGTTCCCAGGCCCAGGGGCCGCAGCGGAGACCC TGCAATTGCAAAGCCAGCAGCTCGAGCTTGATTGGGGGCAGTGGGGCCGGCTGGGAGGGCACAGCCTTACTGCACCATGGCAGCTACATC AAGCTGGGCTGCCTGCAGTTTGTCTTCAGCATCACTGAGTTTGCGACCAAACAGCCCAAAGGCGATGCCAGCCTGCTGCAGGATGGGGTC TTGGCCGAGAAGCTCTCTCTCAAGCCCCACCAGGGCCCTGTGCTGCGCTCCAACTCTGTTCCTTAGGACTGGCGGCTACCCCGCCACTGG CCTGTACACCCACCCAAGACTCCTGCAATGCAAAAATGTACACAAACCAAGCCCGGGTGTTTTCTATACTCTACCAGAAACCCTTCAACT ACAATCTTTGCATGAAATGAAGAAAACCTTTTGACTGTTTTTTAAAAATCCTTTTTCTTTTCTCAAGTTCTAGGGGGCATTTGCACATAT ATTTGTACTCAACATTTCATGGGAAAGCGGCAGACCTGAGCTGAGGAACAGCGTGGGCAGGGAGGGAAAGACCCAGGGTCTGGACACTTC CTCCAACACAAAACCCTTCCCCACCCACCTCCTGCTCCCTCCCCCTCGCCCACCATTGTAAAATAATCAGAAACTTGTTCTATTTTGTGG CAGTGACAATAGTTTTATATTAAAAGAAAAAATACAGTTTTCATACAGCAAAATCTATACAATATCATTGTTTTATTTAATATAAAGATC GCTACCCACCTTCCTTCCATGGTTCCCACCCTCCACGTTATTTTCCCTTTCTGCAGCGGTTGCACTACAGGTAGCTACTGTGTATTATGG ACAAATGAGAAATGAATTCTTTTTCTGGCTGTCCATCTATTTTATTTCAAATAAGGAAAAGTGTATTTGGATTTTGTGTAAATACATCTA GTGATGACATTTTTTCAATGTTTTTAAAAACCGTGTACAGTACTACATGTGGTAGAGCGTTTTCTCAAATTGTCTATTGTAGCAAAAATG TTTTTGTCGTAAACCTGTTTTGTCTCCTTTTTTTGTTCTCTTGCCACTTCTCTCCTCTTCCTCCTGCCCCTGGTTCCCTCCTCTCCTCCC ACCCCCACAACCAGTACCAATGTACATAGTAATTGTAATGTTTTAGACTTTACAGAAACTTTCCTGTATTCTGTATATAAAAAACAAAAA >In-frame_TMPRSS2_ENST00000398585_chr21_42860321_-_PHF12_ENST00000332830_chr17_27235899_-_2206nt ACCAGGGTCCCGGCTCGGGGTCCGGGCTGGGGAGGGGAACCTGGGCGCCTGGGACCCGCCGATGCCCCCTGCCCCGCCCGGAGGTGAAAG CGGGTGTGAGGAGCGCGGCGCGGCAGGTCATATTGAACATTCCAGATACCTATCATTACTCGATGCTGTTGATAACAGCAAGATGGCTTT GAACTCAGGGTCACCACCAGCTATTGGACCTTACTATGAAAACCATGGATACCAACCGGAAAACCCCTATCCCGCACAGCCCACTGTGGT CCCCACTGTCTACGAGGTGCATCCGGCTCAGTACTACCCGTCCCCCGTGCCCCAGTACGCCCCGAGGGTCCTGACGCAGGCTTCCAACCC CGTCGTCTGCACGCAGCCCAAATCCCCATCCGGGACAGTGTGCACCTCAAAGACTAAGAAAGCACTGTGCATCACCTTGACCCTGGGGAC CTTCCTCGTGGGAGCTGCGCTGGCCGCTGGCCTACTCTGGAAGTTCATGGGCAGCAAGTGCTCCAACTCTGGGATAGAGTGCGACTCCTC AGGTACCTGCATCAACCCCTCTAACTGGTGTGATGGCGTGTCACACTGCCCCGGCGGGGAGGACGAGAATCGGTGTGTGCAAAGAAAGGA GGTACAGGCCCGAGCTGTGTTCTACCCCCTCTTAGGGTTGGGAGGAGCTGTGAACATGTGCTATCGAACCCTCTACATCGGGACAGGAGC TGACATGGATGTGTGCCTTACAAACTATGGTCACTGTAACTACGTGTCCGGGAAACATGCCTGCATATTCTACGATGAGAATACCAAACA TTATGAGCTGTTAAACTACAGTGAGCATGGGACAACGGTGGACAATGTGCTGTATTCATGTGACTTCTCGGAGAAGACCCCGCCAACCCC CCCAAGCAGTATTGTTGCCAAAGTGCAGAGTGTCATCAGGCGCCGCCGGCACCAGAAACAGGACGAAGAGCCAAGTGAGGAGGCAGCCAT GATGAGTTCCCAGGCCCAGGGGCCGCAGCGGAGACCCTGCAATTGCAAAGCCAGCAGCTCGAGCTTGATTGGGGGCAGTGGGGCCGGCTG GGAGGGCACAGCCTTACTGCACCATGGCAGCTACATCAAGCTGGGCTGCCTGCAGTTTGTCTTCAGCATCACTGAGTTTGCGACCAAACA GCCCAAAGGCGATGCCAGCCTGCTGCAGGATGGGGTCTTGGCCGAGAAGCTCTCTCTCAAGCCCCACCAGGGCCCTGTGCTGCGCTCCAA CTCTGTTCCTTAGGACTGGCGGCTACCCCGCCACTGGCCTGTACACCCACCCAAGACTCCTGCAATGCAAAAATGTACACAAACCAAGCC CGGGTGTTTTCTATACTCTACCAGAAACCCTTCAACTACAATCTTTGCATGAAATGAAGAAAACCTTTTGACTGTTTTTTAAAAATCCTT TTTCTTTTCTCAAGTTCTAGGGGGCATTTGCACATATATTTGTACTCAACATTTCATGGGAAAGCGGCAGACCTGAGCTGAGGAACAGCG TGGGCAGGGAGGGAAAGACCCAGGGTCTGGACACTTCCTCCAACACAAAACCCTTCCCCACCCACCTCCTGCTCCCTCCCCCTCGCCCAC CATTGTAAAATAATCAGAAACTTGTTCTATTTTGTGGCAGTGACAATAGTTTTATATTAAAAGAAAAAATACAGTTTTCATACAGCAAAA TCTATACAATATCATTGTTTTATTTAATATAAAGATCGCTACCCACCTTCCTTCCATGGTTCCCACCCTCCACGTTATTTTCCCTTTCTG CAGCGGTTGCACTACAGGTAGCTACTGTGTATTATGGACAAATGAGAAATGAATTCTTTTTCTGGCTGTCCATCTATTTTATTTCAAATA AGGAAAAGTGTATTTGGATTTTGTGTAAATACATCTAGTGATGACATTTTTTCAATGTTTTTAAAAACCGTGTACAGTACTACATGTGGT AGAGCGTTTTCTCAAATTGTCTATTGTAGCAAAAATGTTTTTGTCGTAAACCTGTTTTGTCTCCTTTTTTTGTTCTCTTGCCACTTCTCT CCTCTTCCTCCTGCCCCTGGTTCCCTCCTCTCCTCCCACCCCCACAACCAGTACCAATGTACATAGTAATTGTAATGTTTTAGACTTTAC |
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FusionGenePPI for TMPRSS2_PHF12 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
TMPRSS2 | CLK1 | PHF12 | SIN3A, HDAC1, SAP30, MORF4L1, MORF4L2, BRCA1, HIST3H3, GATAD1, RBBP7, HDAC2, KDM5A, S100A4, SIN3B, C11orf30, SPICE1, ZNF281, ZNF131, QSER1, CHD9, PHF12, TUBA4A, ZNF143, DPM1, ZNF335, RBFOX2, RBFOX1, H2AFY, BAG2, HSPB1, NFE2L1, TUBB8, DNAJA3, SENP1, ABCF2, GPATCH8, ABCG2 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 102_273 | -177 | 705 | SIN3A |
Tgene | PHF12 | chr21:42860321 | chr17:27235899 | ENST00000268756 | - | 0 | 9 | 300_704 | -177 | 705 | SIN3A |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 102_273 | 786 | 1005 | SIN3A |
Tgene | PHF12 | chr21:42860321 | chr17:27235899 | ENST00000332830 | - | 10 | 15 | 300_704 | 786 | 1005 | SIN3A |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TMPRSS2_PHF12 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TMPRSS2_PHF12 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | TMPRSS2 | C0033578 | Prostatic Neoplasms | 2 | CTD_human |