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Fusion gene ID: 38559 |
FusionGeneSummary for TMEM234_RUSC1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TMEM234_RUSC1 | Fusion gene ID: 38559 | Hgene | Tgene | Gene symbol | TMEM234 | RUSC1 | Gene ID | 56063 | 23623 |
Gene name | transmembrane protein 234 | RUN and SH3 domain containing 1 | |
Synonyms | AASL548|C1orf91|PRO1105|RP4-622L5|dJ622L5.7 | NESCA | |
Cytomap | 1p35.2 | 1q22 | |
Type of gene | protein-coding | protein-coding | |
Description | transmembrane protein 234 | RUN and SH3 domain-containing protein 1new molecule containing SH3 at the carboxy-terminus | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q8WY98 | Q9BVN2 | |
Ensembl transtripts involved in fusion gene | ENST00000545122, ENST00000309777, ENST00000373593, ENST00000344461, ENST00000485689, | ENST00000368354, ENST00000368352, ENST00000368347, ENST00000462780, ENST00000368349, ENST00000292254, | |
Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 3 X 3 X 3=27 |
# samples | 3 | 3 | |
** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: TMEM234 [Title/Abstract] AND RUSC1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | RUSC1 | GO:0000209 | protein polyubiquitination | 19365808 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | UCEC | TCGA-D1-A3DG-01A | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000545122 | ENST00000368354 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3CDS | ENST00000545122 | ENST00000368352 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3CDS | ENST00000545122 | ENST00000368347 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3UTR | ENST00000545122 | ENST00000462780 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3UTR | ENST00000545122 | ENST00000368349 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3UTR | ENST00000545122 | ENST00000292254 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
Frame-shift | ENST00000309777 | ENST00000368354 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
Frame-shift | ENST00000309777 | ENST00000368352 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
Frame-shift | ENST00000309777 | ENST00000368347 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000309777 | ENST00000462780 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000309777 | ENST00000368349 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000309777 | ENST00000292254 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
Frame-shift | ENST00000373593 | ENST00000368354 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
Frame-shift | ENST00000373593 | ENST00000368352 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
Frame-shift | ENST00000373593 | ENST00000368347 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000373593 | ENST00000462780 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000373593 | ENST00000368349 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000373593 | ENST00000292254 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
In-frame | ENST00000344461 | ENST00000368354 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
In-frame | ENST00000344461 | ENST00000368352 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
In-frame | ENST00000344461 | ENST00000368347 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000344461 | ENST00000462780 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000344461 | ENST00000368349 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
5CDS-3UTR | ENST00000344461 | ENST00000292254 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3CDS | ENST00000485689 | ENST00000368354 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3CDS | ENST00000485689 | ENST00000368352 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3CDS | ENST00000485689 | ENST00000368347 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3UTR | ENST00000485689 | ENST00000462780 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3UTR | ENST00000485689 | ENST00000368349 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
intron-3UTR | ENST00000485689 | ENST00000292254 | TMEM234 | chr1 | 32681795 | - | RUSC1 | chr1 | 155295107 | + |
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FusionProtFeatures for TMEM234_RUSC1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
TMEM234 | RUSC1 |
Putative signaling adapter which may play a role inneuronal differentiation. May be involved in regulation of NGF-dependent neurite outgrowth. Proposed to play a role in neuronalvesicular trafficking, specifically involving pre-synapticmembrane proteins. Seems to be involved in signaling pathways thatare regulated by the prolonged activation of MAPK. Can regulatethe polyubiquitination of IKBKG and thus may be involved inregulation of the NF-kappa-B pathway.{ECO:0000269|PubMed:19365808}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for TMEM234_RUSC1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368354_chr1_155295107_+_286aa AQLGDSRLSPDVGHLVLTTLCPALHALVADGLKPFRKDLITGQRRSSPWSVVEASVKPGSSTRSLGTLYSQVSRLAPLSSSRSRFHAFIL GLLNTKQLELWFSSLQEDAGSWWEQLTQASRVYASGGTEGFPLSRWAPGRHGTAAEEGAQERPLPTDEMAPGRGLWLGRLFGVPGGPAEN ENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAPRMVQTHRAVRALCDHTAARPDQLSFRRGEVLRVITTVDEDWLRCGRD >In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368352_chr1_155295107_+_392aa AQLGDSRLSPDVGHLVLTTLCPALHALVADGLKPFRKDLITGQRRSSPWSVVEASVKPGSSTRSLGTLYSQVSRLAPLSSSRSRFHAFIL GLLNTKQLELWFSSLQEDAGLLSLLYLPTGFFSLARGGCPSLSTELLLLLQPLSVLTFHLDLLFEHHHHLPLGPPQAPAPPGPPPALQQT MQAMLHFGGRLAQSLRGTSKEAASDPSDSPNLPTPGSWWEQLTQASRVYASGGTEGFPLSRWAPGRHGTAAEEGAQERPLPTDEMAPGRG LWLGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAPRMVQTHRAVRALCDHTAARPDQLSFRRGEVL >In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368347_chr1_155295107_+_392aa AQLGDSRLSPDVGHLVLTTLCPALHALVADGLKPFRKDLITGQRRSSPWSVVEASVKPGSSTRSLGTLYSQVSRLAPLSSSRSRFHAFIL GLLNTKQLELWFSSLQEDAGLLSLLYLPTGFFSLARGGCPSLSTELLLLLQPLSVLTFHLDLLFEHHHHLPLGPPQAPAPPGPPPALQQT MQAMLHFGGRLAQSLRGTSKEAASDPSDSPNLPTPGSWWEQLTQASRVYASGGTEGFPLSRWAPGRHGTAAEEGAQERPLPTDEMAPGRG LWLGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAPRMVQTHRAVRALCDHTAARPDQLSFRRGEVL |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368354_chr1_155295107_+_858nt GCCCAGTTGGGTGATAGCCGGCTGAGCCCGGATGTGGGGCACCTGGTGCTGACCACCCTCTGCCCGGCCCTCCACGCCCTGGTGGCGGAC GGGCTGAAGCCTTTCCGGAAGGACCTCATCACCGGGCAGCGCAGGAGCAGCCCCTGGAGCGTGGTGGAGGCGTCGGTGAAGCCAGGCTCC AGCACCCGCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTCTAGCCCCGCTGAGCAGCAGCCGTAGCCGCTTCCATGCCTTTATCCTG GGCCTCCTCAACACCAAGCAGTTGGAGCTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGGAGCTGGTGGGAGCAGTTGACCCAGGCCTCC CGGGTCTATGCCTCTGGGGGCACTGAGGGCTTTCCTCTTTCCCGATGGGCACCGGGGCGTCATGGGACTGCAGCTGAAGAAGGTGCACAG GAGAGACCCCTGCCCACAGATGAGATGGCACCAGGCAGGGGCCTCTGGTTGGGAAGACTATTTGGAGTGCCTGGGGGCCCCGCAGAAAAT GAGAATGGAGCCCTAAAGTCCAGGAGACCATCTAGCTGGCTGCCCCCGACAGTGAGTGTGTTGGCTCTTGTGAAGCGGGGGGCACCTCCC GAGATGCCTTCTCCTCAGGAGCTTGAGGCCTCAGCACCCAGGATGGTGCAAACCCATAGGGCAGTGCGGGCTCTCTGTGATCACACTGCT GCAAGACCTGACCAGTTGAGCTTCCGGCGTGGGGAAGTGCTGCGTGTCATCACCACAGTGGATGAGGACTGGCTCCGCTGTGGGCGGGAT >In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368352_chr1_155295107_+_1176nt GCCCAGTTGGGTGATAGCCGGCTGAGCCCGGATGTGGGGCACCTGGTGCTGACCACCCTCTGCCCGGCCCTCCACGCCCTGGTGGCGGAC GGGCTGAAGCCTTTCCGGAAGGACCTCATCACCGGGCAGCGCAGGAGCAGCCCCTGGAGCGTGGTGGAGGCGTCGGTGAAGCCAGGCTCC AGCACCCGCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTCTAGCCCCGCTGAGCAGCAGCCGTAGCCGCTTCCATGCCTTTATCCTG GGCCTCCTCAACACCAAGCAGTTGGAGCTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGCCTGCTCTCCCTCCTGTACCTGCCAACAGGA TTTTTCTCCCTGGCCCGCGGTGGTTGTCCCTCCCTGTCCACAGAGCTGCTGCTCCTGCTGCAGCCATTGTCGGTGCTCACTTTCCACCTG GACCTGCTCTTTGAGCACCACCACCACCTGCCCCTGGGCCCACCTCAGGCCCCTGCCCCTCCAGGCCCACCTCCAGCTCTGCAGCAGACT ATGCAAGCCATGCTGCACTTTGGGGGCCGGCTGGCCCAGAGCCTTCGGGGGACTTCCAAGGAAGCTGCTTCAGACCCCTCTGACTCTCCA AACCTTCCCACACCAGGGAGCTGGTGGGAGCAGTTGACCCAGGCCTCCCGGGTCTATGCCTCTGGGGGCACTGAGGGCTTTCCTCTTTCC CGATGGGCACCGGGGCGTCATGGGACTGCAGCTGAAGAAGGTGCACAGGAGAGACCCCTGCCCACAGATGAGATGGCACCAGGCAGGGGC CTCTGGTTGGGAAGACTATTTGGAGTGCCTGGGGGCCCCGCAGAAAATGAGAATGGAGCCCTAAAGTCCAGGAGACCATCTAGCTGGCTG CCCCCGACAGTGAGTGTGTTGGCTCTTGTGAAGCGGGGGGCACCTCCCGAGATGCCTTCTCCTCAGGAGCTTGAGGCCTCAGCACCCAGG ATGGTGCAAACCCATAGGGCAGTGCGGGCTCTCTGTGATCACACTGCTGCAAGACCTGACCAGTTGAGCTTCCGGCGTGGGGAAGTGCTG CGTGTCATCACCACAGTGGATGAGGACTGGCTCCGCTGTGGGCGGGATGGCATGGAGGGTCTGGTGCCTGTGGGGTATACCTCCCTTGTT >In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368347_chr1_155295107_+_1176nt GCCCAGTTGGGTGATAGCCGGCTGAGCCCGGATGTGGGGCACCTGGTGCTGACCACCCTCTGCCCGGCCCTCCACGCCCTGGTGGCGGAC GGGCTGAAGCCTTTCCGGAAGGACCTCATCACCGGGCAGCGCAGGAGCAGCCCCTGGAGCGTGGTGGAGGCGTCGGTGAAGCCAGGCTCC AGCACCCGCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTCTAGCCCCGCTGAGCAGCAGCCGTAGCCGCTTCCATGCCTTTATCCTG GGCCTCCTCAACACCAAGCAGTTGGAGCTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGCCTGCTCTCCCTCCTGTACCTGCCAACAGGA TTTTTCTCCCTGGCCCGCGGTGGTTGTCCCTCCCTGTCCACAGAGCTGCTGCTCCTGCTGCAGCCATTGTCGGTGCTCACTTTCCACCTG GACCTGCTCTTTGAGCACCACCACCACCTGCCCCTGGGCCCACCTCAGGCCCCTGCCCCTCCAGGCCCACCTCCAGCTCTGCAGCAGACT ATGCAAGCCATGCTGCACTTTGGGGGCCGGCTGGCCCAGAGCCTTCGGGGGACTTCCAAGGAAGCTGCTTCAGACCCCTCTGACTCTCCA AACCTTCCCACACCAGGGAGCTGGTGGGAGCAGTTGACCCAGGCCTCCCGGGTCTATGCCTCTGGGGGCACTGAGGGCTTTCCTCTTTCC CGATGGGCACCGGGGCGTCATGGGACTGCAGCTGAAGAAGGTGCACAGGAGAGACCCCTGCCCACAGATGAGATGGCACCAGGCAGGGGC CTCTGGTTGGGAAGACTATTTGGAGTGCCTGGGGGCCCCGCAGAAAATGAGAATGGAGCCCTAAAGTCCAGGAGACCATCTAGCTGGCTG CCCCCGACAGTGAGTGTGTTGGCTCTTGTGAAGCGGGGGGCACCTCCCGAGATGCCTTCTCCTCAGGAGCTTGAGGCCTCAGCACCCAGG ATGGTGCAAACCCATAGGGCAGTGCGGGCTCTCTGTGATCACACTGCTGCAAGACCTGACCAGTTGAGCTTCCGGCGTGGGGAAGTGCTG CGTGTCATCACCACAGTGGATGAGGACTGGCTCCGCTGTGGGCGGGATGGCATGGAGGGTCTGGTGCCTGTGGGGTATACCTCCCTTGTT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368354_chr1_155295107_+_2120nt AGACAGCGGCGTTGCCATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCT GAAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTTGCTACAGGAGATGAAGACCCTCTTCTTGAATAC TGAGTACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCTCTATTACCTCACCTTGGCATCGACAGATCTGACCCTGGCTGTGCC CATCTGTAACTCTCTGGCTATCATCTTCACACTGATTGTTGGGAAGGCCCTTGGAGAAGATATTGGTGGAAAACGAGCAGTTGCTGGCAT GGTGCTCACCGTGATAGGAATTTCACTCTGCATCACAAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCA GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGGCTGAATGAGGGGTGGAACCGAGGGAAGAAGGTG CGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCT CTTAAACAGGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG AGCCCAGTTGGGTGATAGCCGGCTGAGCCCGGATGTGGGGCACCTGGTGCTGACCACCCTCTGCCCGGCCCTCCACGCCCTGGTGGCGGA CGGGCTGAAGCCTTTCCGGAAGGACCTCATCACCGGGCAGCGCAGGAGCAGCCCCTGGAGCGTGGTGGAGGCGTCGGTGAAGCCAGGCTC CAGCACCCGCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTCTAGCCCCGCTGAGCAGCAGCCGTAGCCGCTTCCATGCCTTTATCCT GGGCCTCCTCAACACCAAGCAGTTGGAGCTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGGAGCTGGTGGGAGCAGTTGACCCAGGCCTC CCGGGTCTATGCCTCTGGGGGCACTGAGGGCTTTCCTCTTTCCCGATGGGCACCGGGGCGTCATGGGACTGCAGCTGAAGAAGGTGCACA GGAGAGACCCCTGCCCACAGATGAGATGGCACCAGGCAGGGGCCTCTGGTTGGGAAGACTATTTGGAGTGCCTGGGGGCCCCGCAGAAAA TGAGAATGGAGCCCTAAAGTCCAGGAGACCATCTAGCTGGCTGCCCCCGACAGTGAGTGTGTTGGCTCTTGTGAAGCGGGGGGCACCTCC CGAGATGCCTTCTCCTCAGGAGCTTGAGGCCTCAGCACCCAGGATGGTGCAAACCCATAGGGCAGTGCGGGCTCTCTGTGATCACACTGC TGCAAGACCTGACCAGTTGAGCTTCCGGCGTGGGGAAGTGCTGCGTGTCATCACCACAGTGGATGAGGACTGGCTCCGCTGTGGGCGGGA TGGCATGGAGGGTCTGGTGCCTGTGGGGTATACCTCCCTTGTTCTGTAGCCCTGGGACCCTTTCCTGCGTATGTGTCTCCTTCCTGTCAC CTGGGAATGGAATGGCCAGTGAACACCATCCCAGAAGCATTTTCCCTCTGCAAAATGACGTTTCTTCCCACGTCTGTTTCTGCTAATATT TAAAATAAACTTTCCTTCTTCCCTCCTATACCCACCTGTAAGGTGAAATCTGCTCTTCTTCCAAATATATAAAAAAGGAATTGCCCTCCA GGTAATCCCTTTCCTTTTTCCCGTCTATATAAGGGAATGTCTTCCTTCCTATCTATCTGCAAAATGGAAATCTAGACCTCCTTCTTCATC CATAAGTGGACTGTGCCAGTACAATACATGCCTCAGCCCCCAAGCCTAGAAGGACCTCTAGTCTCCTTCCTGTGTGGAATCTTCCCCACT CCATCCCTCCCAAGTTGCCTGTATTGATAATGTACTCACTCATGCTGTACTAGGTGCTGAAGCCTGGACACCCTTGGTGGGTGGGCCTGT >In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368352_chr1_155295107_+_2440nt AGACAGCGGCGTTGCCATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCT GAAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTTGCTACAGGAGATGAAGACCCTCTTCTTGAATAC TGAGTACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCTCTATTACCTCACCTTGGCATCGACAGATCTGACCCTGGCTGTGCC CATCTGTAACTCTCTGGCTATCATCTTCACACTGATTGTTGGGAAGGCCCTTGGAGAAGATATTGGTGGAAAACGAGCAGTTGCTGGCAT GGTGCTCACCGTGATAGGAATTTCACTCTGCATCACAAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCA GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGGCTGAATGAGGGGTGGAACCGAGGGAAGAAGGTG CGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCT CTTAAACAGGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG AGCCCAGTTGGGTGATAGCCGGCTGAGCCCGGATGTGGGGCACCTGGTGCTGACCACCCTCTGCCCGGCCCTCCACGCCCTGGTGGCGGA CGGGCTGAAGCCTTTCCGGAAGGACCTCATCACCGGGCAGCGCAGGAGCAGCCCCTGGAGCGTGGTGGAGGCGTCGGTGAAGCCAGGCTC CAGCACCCGCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTCTAGCCCCGCTGAGCAGCAGCCGTAGCCGCTTCCATGCCTTTATCCT GGGCCTCCTCAACACCAAGCAGTTGGAGCTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGCCTGCTCTCCCTCCTGTACCTGCCAACAGG ATTTTTCTCCCTGGCCCGCGGTGGTTGTCCCTCCCTGTCCACAGAGCTGCTGCTCCTGCTGCAGCCATTGTCGGTGCTCACTTTCCACCT GGACCTGCTCTTTGAGCACCACCACCACCTGCCCCTGGGCCCACCTCAGGCCCCTGCCCCTCCAGGCCCACCTCCAGCTCTGCAGCAGAC TATGCAAGCCATGCTGCACTTTGGGGGCCGGCTGGCCCAGAGCCTTCGGGGGACTTCCAAGGAAGCTGCTTCAGACCCCTCTGACTCTCC AAACCTTCCCACACCAGGGAGCTGGTGGGAGCAGTTGACCCAGGCCTCCCGGGTCTATGCCTCTGGGGGCACTGAGGGCTTTCCTCTTTC CCGATGGGCACCGGGGCGTCATGGGACTGCAGCTGAAGAAGGTGCACAGGAGAGACCCCTGCCCACAGATGAGATGGCACCAGGCAGGGG CCTCTGGTTGGGAAGACTATTTGGAGTGCCTGGGGGCCCCGCAGAAAATGAGAATGGAGCCCTAAAGTCCAGGAGACCATCTAGCTGGCT GCCCCCGACAGTGAGTGTGTTGGCTCTTGTGAAGCGGGGGGCACCTCCCGAGATGCCTTCTCCTCAGGAGCTTGAGGCCTCAGCACCCAG GATGGTGCAAACCCATAGGGCAGTGCGGGCTCTCTGTGATCACACTGCTGCAAGACCTGACCAGTTGAGCTTCCGGCGTGGGGAAGTGCT GCGTGTCATCACCACAGTGGATGAGGACTGGCTCCGCTGTGGGCGGGATGGCATGGAGGGTCTGGTGCCTGTGGGGTATACCTCCCTTGT TCTGTAGCCCTGGGACCCTTTCCTGCGTATGTGTCTCCTTCCTGTCACCTGGGAATGGAATGGCCAGTGAACACCATCCCAGAAGCATTT TCCCTCTGCAAAATGACGTTTCTTCCCACGTCTGTTTCTGCTAATATTTAAAATAAACTTTCCTTCTTCCCTCCTATACCCACCTGTAAG GTGAAATCTGCTCTTCTTCCAAATATATAAAAAAGGAATTGCCCTCCAGGTAATCCCTTTCCTTTTTCCCGTCTATATAAGGGAATGTCT TCCTTCCTATCTATCTGCAAAATGGAAATCTAGACCTCCTTCTTCATCCATAAGTGGACTGTGCCAGTACAATACATGCCTCAGCCCCCA AGCCTAGAAGGACCTCTAGTCTCCTTCCTGTGTGGAATCTTCCCCACTCCATCCCTCCCAAGTTGCCTGTATTGATAATGTACTCACTCA TGCTGTACTAGGTGCTGAAGCCTGGACACCCTTGGTGGGTGGGCCTGTGGTGATGGTTTGCATCCTTCCTCCTTTGTCCCAATAAAGTAT >In-frame_TMEM234_ENST00000344461_chr1_32681795_-_RUSC1_ENST00000368347_chr1_155295107_+_2440nt AGACAGCGGCGTTGCCATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGCTGCT GAAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTTGCTACAGGAGATGAAGACCCTCTTCTTGAATAC TGAGTACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCTCTATTACCTCACCTTGGCATCGACAGATCTGACCCTGGCTGTGCC CATCTGTAACTCTCTGGCTATCATCTTCACACTGATTGTTGGGAAGGCCCTTGGAGAAGATATTGGTGGAAAACGAGCAGTTGCTGGCAT GGTGCTCACCGTGATAGGAATTTCACTCTGCATCACAAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGAAAGGGCCAGCTGCA GACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTGGCTGAATGAGGGGTGGAACCGAGGGAAGAAGGTG CGTCGGAGTGGCAGATGCAGGAAATGAGCTGTCTATTAGCCTTGCCTGCCCCACCCATGAGGTAGGCAGAAATCCTCACTGCCAGCCCCT CTTAAACAGGTAGAGAGCTGTGAGCCCCAGCCCCACCTGACTCCAGCACACCTGGCGAGTAGTAGCTGTCAATAAATCTATGGTAAACAG AGCCCAGTTGGGTGATAGCCGGCTGAGCCCGGATGTGGGGCACCTGGTGCTGACCACCCTCTGCCCGGCCCTCCACGCCCTGGTGGCGGA CGGGCTGAAGCCTTTCCGGAAGGACCTCATCACCGGGCAGCGCAGGAGCAGCCCCTGGAGCGTGGTGGAGGCGTCGGTGAAGCCAGGCTC CAGCACCCGCTCCCTTGGAACCCTGTATAGCCAGGTCAGCCGTCTAGCCCCGCTGAGCAGCAGCCGTAGCCGCTTCCATGCCTTTATCCT GGGCCTCCTCAACACCAAGCAGTTGGAGCTGTGGTTTTCCAGTCTCCAGGAAGATGCAGGCCTGCTCTCCCTCCTGTACCTGCCAACAGG ATTTTTCTCCCTGGCCCGCGGTGGTTGTCCCTCCCTGTCCACAGAGCTGCTGCTCCTGCTGCAGCCATTGTCGGTGCTCACTTTCCACCT GGACCTGCTCTTTGAGCACCACCACCACCTGCCCCTGGGCCCACCTCAGGCCCCTGCCCCTCCAGGCCCACCTCCAGCTCTGCAGCAGAC TATGCAAGCCATGCTGCACTTTGGGGGCCGGCTGGCCCAGAGCCTTCGGGGGACTTCCAAGGAAGCTGCTTCAGACCCCTCTGACTCTCC AAACCTTCCCACACCAGGGAGCTGGTGGGAGCAGTTGACCCAGGCCTCCCGGGTCTATGCCTCTGGGGGCACTGAGGGCTTTCCTCTTTC CCGATGGGCACCGGGGCGTCATGGGACTGCAGCTGAAGAAGGTGCACAGGAGAGACCCCTGCCCACAGATGAGATGGCACCAGGCAGGGG CCTCTGGTTGGGAAGACTATTTGGAGTGCCTGGGGGCCCCGCAGAAAATGAGAATGGAGCCCTAAAGTCCAGGAGACCATCTAGCTGGCT GCCCCCGACAGTGAGTGTGTTGGCTCTTGTGAAGCGGGGGGCACCTCCCGAGATGCCTTCTCCTCAGGAGCTTGAGGCCTCAGCACCCAG GATGGTGCAAACCCATAGGGCAGTGCGGGCTCTCTGTGATCACACTGCTGCAAGACCTGACCAGTTGAGCTTCCGGCGTGGGGAAGTGCT GCGTGTCATCACCACAGTGGATGAGGACTGGCTCCGCTGTGGGCGGGATGGCATGGAGGGTCTGGTGCCTGTGGGGTATACCTCCCTTGT TCTGTAGCCCTGGGACCCTTTCCTGCGTATGTGTCTCCTTCCTGTCACCTGGGAATGGAATGGCCAGTGAACACCATCCCAGAAGCATTT TCCCTCTGCAAAATGACGTTTCTTCCCACGTCTGTTTCTGCTAATATTTAAAATAAACTTTCCTTCTTCCCTCCTATACCCACCTGTAAG GTGAAATCTGCTCTTCTTCCAAATATATAAAAAAGGAATTGCCCTCCAGGTAATCCCTTTCCTTTTTCCCGTCTATATAAGGGAATGTCT TCCTTCCTATCTATCTGCAAAATGGAAATCTAGACCTCCTTCTTCATCCATAAGTGGACTGTGCCAGTACAATACATGCCTCAGCCCCCA AGCCTAGAAGGACCTCTAGTCTCCTTCCTGTGTGGAATCTTCCCCACTCCATCCCTCCCAAGTTGCCTGTATTGATAATGTACTCACTCA TGCTGTACTAGGTGCTGAAGCCTGGACACCCTTGGTGGGTGGGCCTGTGGTGATGGTTTGCATCCTTCCTCCTTTGTCCCAATAAAGTAT |
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FusionGenePPI for TMEM234_RUSC1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
TMEM234 | CREB3L1, CREB3, LMNA | RUSC1 | IKBKG, TRAF6, APP, PNMA1, STUB1, RBPMS, WWP2, FAM9B, DVL2, HNRNPH2, UBE2S, FAM83H |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TMEM234_RUSC1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TMEM234_RUSC1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |