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Fusion gene ID: 3851 |
FusionGeneSummary for BAZ1A_LRRC9 |
Fusion gene summary |
Fusion gene information | Fusion gene name: BAZ1A_LRRC9 | Fusion gene ID: 3851 | Hgene | Tgene | Gene symbol | BAZ1A | LRRC9 | Gene ID | 11177 | 341883 |
Gene name | bromodomain adjacent to zinc finger domain 1A | leucine rich repeat containing 9 | |
Synonyms | ACF1|WALp1|WCRF180|hACF1 | - | |
Cytomap | 14q13.1-q13.2 | 14q23.1 | |
Type of gene | protein-coding | protein-coding | |
Description | bromodomain adjacent to zinc finger domain protein 1AATP-dependent chromatin remodeling proteinATP-utilizing chromatin assembly and remodeling factor 1CHRAC subunit ACF1hWALp1williams syndrome transcription factor-related chromatin-remodeling factor | leucine-rich repeat-containing protein 9 | |
Modification date | 20180519 | 20180421 | |
UniProtAcc | Q9NRL2 | Q6ZRR7 | |
Ensembl transtripts involved in fusion gene | ENST00000358716, ENST00000382422, ENST00000360310, ENST00000553853, | ENST00000445360, ENST00000454474, | |
Fusion gene scores | * DoF score | 5 X 4 X 3=60 | 3 X 3 X 2=18 |
# samples | 5 | 2 | |
** MAII score | log2(5/60*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/18*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: BAZ1A [Title/Abstract] AND LRRC9 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Transcription factor involved fusion gene, inframe and retained DNA-binding domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | BAZ1A | GO:0006261 | DNA-dependent DNA replication | 12434153 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LUAD | TCGA-78-8660-01A | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000358716 | ENST00000445360 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
5CDS-intron | ENST00000358716 | ENST00000454474 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
Frame-shift | ENST00000382422 | ENST00000445360 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
5CDS-intron | ENST00000382422 | ENST00000454474 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
In-frame | ENST00000360310 | ENST00000445360 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
5CDS-intron | ENST00000360310 | ENST00000454474 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
5UTR-3CDS | ENST00000553853 | ENST00000445360 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
5UTR-intron | ENST00000553853 | ENST00000454474 | BAZ1A | chr14 | 35331250 | - | LRRC9 | chr14 | 60444735 | + |
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FusionProtFeatures for BAZ1A_LRRC9 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
BAZ1A | LRRC9 |
Component of the ACF complex, an ATP-dependent chromatinremodeling complex, that regulates spacing of nucleosomes usingATP to generate evenly spaced nucleosomes along the chromatin. TheATPase activity of the complex is regulated by the length offlanking DNA. Also involved in facilitating the DNA replicationprocess. BAZ1A is the accessory, non-catalytic subunit of thecomplex which can enhance and direct the process provided by theATPase subunit, SMARCA5, probably through targetingpericentromeric heterochromatin in late S phase. Moves end-positioned nucleosomes to a predominantly central position. Mayhave a role in nuclear receptor-mediated transcription repression. Component of the histone-fold protein complex CHRACcomplex which facilitates nucleosome sliding by the ACF complexand enhances ACF-mediated chromatin assembly. The C-terminalregions of both CHRAC1 and POLE1 are required for these functions. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 22_128 | 130 | 1525 | Domain | WAC |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 22_128 | 130 | 1557 | Domain | WAC |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 22_128 | 130 | 1557 | Domain | WAC |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 1_128 | 130 | 1525 | Region | Note=Required for association with the CHRAC1/POLE3 complex |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 1_128 | 130 | 1557 | Region | Note=Required for association with the CHRAC1/POLE3 complex |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 1_128 | 130 | 1557 | Region | Note=Required for association with the CHRAC1/POLE3 complex |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1023_1048 | 587 | 1454 | Repeat | Note=LRR 20 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1092_1115 | 587 | 1454 | Repeat | Note=LRR 21 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1116_1138 | 587 | 1454 | Repeat | Note=LRR 22 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1139_1161 | 587 | 1454 | Repeat | Note=LRR 23 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1201_1224 | 587 | 1454 | Repeat | Note=LRR 24 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1225_1247 | 587 | 1454 | Repeat | Note=LRR 25 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1248_1270 | 587 | 1454 | Repeat | Note=LRR 26 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1272_1292 | 587 | 1454 | Repeat | Note=LRR 27 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1293_1317 | 587 | 1454 | Repeat | Note=LRR 28 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1319_1345 | 587 | 1454 | Repeat | Note=LRR 29 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 1365_1388 | 587 | 1454 | Repeat | Note=LRR 30 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 671_693 | 587 | 1454 | Repeat | Note=LRR 9 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 694_715 | 587 | 1454 | Repeat | Note=LRR 10 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 716_737 | 587 | 1454 | Repeat | Note=LRR 11 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 739_758 | 587 | 1454 | Repeat | Note=LRR 12 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 759_784 | 587 | 1454 | Repeat | Note=LRR 13 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 786_812 | 587 | 1454 | Repeat | Note=LRR 14 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 886_908 | 587 | 1454 | Repeat | Note=LRR 15 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 909_930 | 587 | 1454 | Repeat | Note=LRR 16 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 931_952 | 587 | 1454 | Repeat | Note=LRR 17 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 953_975 | 587 | 1454 | Repeat | Note=LRR 18 |
Tgene | >LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 976_1001 | 587 | 1454 | Repeat | Note=LRR 19 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 306_397 | 130 | 1525 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 634_709 | 130 | 1525 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 306_397 | 130 | 1557 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 634_709 | 130 | 1557 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 306_397 | 130 | 1557 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 634_709 | 130 | 1557 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 1239_1257 | 130 | 1525 | Compositional bias | Note=Glu-rich |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 487_491 | 130 | 1525 | Compositional bias | Note=Poly-Glu |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 1239_1257 | 130 | 1557 | Compositional bias | Note=Glu-rich |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 487_491 | 130 | 1557 | Compositional bias | Note=Poly-Glu |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 1239_1257 | 130 | 1557 | Compositional bias | Note=Glu-rich |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 487_491 | 130 | 1557 | Compositional bias | Note=Poly-Glu |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 1446_1516 | 130 | 1525 | Domain | Bromo |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 422_487 | 130 | 1525 | Domain | DDT |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 1446_1516 | 130 | 1557 | Domain | Bromo |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 422_487 | 130 | 1557 | Domain | DDT |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 1446_1516 | 130 | 1557 | Domain | Bromo |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 422_487 | 130 | 1557 | Domain | DDT |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 1148_1198 | 130 | 1525 | Zinc finger | PHD-type |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 1148_1198 | 130 | 1557 | Zinc finger | PHD-type |
Hgene | >BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 1148_1198 | 130 | 1557 | Zinc finger | PHD-type |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 120_141 | 587 | 1454 | Repeat | Note=LRR 3 |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 142_164 | 587 | 1454 | Repeat | Note=LRR 4 |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 166_188 | 587 | 1454 | Repeat | Note=LRR 5 |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 224_248 | 587 | 1454 | Repeat | Note=LRR 6 |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 264_287 | 587 | 1454 | Repeat | Note=LRR 7 |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 344_367 | 587 | 1454 | Repeat | Note=LRR 8 |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 53_78 | 587 | 1454 | Repeat | Note=LRR 1 |
Tgene | LRRC9 | chr14:35331250 | chr14:60444735 | ENST00000445360 | + | 13 | 32 | 97_119 | 587 | 1454 | Repeat | Note=LRR 2 |
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FusionGeneSequence for BAZ1A_LRRC9 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_BAZ1A_ENST00000358716_chr14_35331250_-_LRRC9_ENST00000445360_chr14_60444735_+_997aa MPLLHRKPFVRQKPPADLRPDEEVFYCKVTNEIFRHYDDFFERTILCNSLVWSCAVTGRPGLTYQEALESEKKARQNLQSFPEPLIIPVL YLTSLTHRSRLHEICDDIFAYVKDRYFVEETVEVIRNNGARFCHGTKKLXLQCSAVQVVCLXSXPCFAGICCXIXVYYNGQGTLFIFCIQ QCYSRRKQKKPRSISIFQGFEIXXXSYKNGAQNQGPTKTDXFGXXNNTFPCKDXRLQSYCESESTWKQLEXIERSLQVNRTSKTKHXLXX IYLFRXCIPLVXPXIFGCKPXPCDNPXGIXRSDETEALRLELESTEKIWQXNKYVMQTHHKPSHSXYSTXSMAKASHIEAECYWQIKDSY PFKWSLHFXRRSNSSYEIYCRNKDYSVISLTAFXYXRGETTDTXYMAFCQNSDAGFKVRTSFTSEWKLLLEDNCLKFRWTTSFXNHKFRK IGKFEMGIIQQXXSHXNGGSGILYXLGRAHIRWKLHLKDRRYFQDDXINSPQHKXXSSHWLGRAYLXXHASSSLAFSXEQQNHFIEWFTK IFYSCXVIHKQXLYCCQSGDAQFKGFMQLGHSRHVWEHHYMESRKLPVVCNISSSRTESFGWDTNXTIRDXQCKRFVWWXTYFXHDCRTT RTFQLQTNARTKLDFIIYXNSGFDSSRPIXKCVXCESTEQSSYLIQWINLSTXCEGLMPXLXSYXINHAQTKASDSLNQXTTTVPESAFK WLWTARNFKNKQRYNEQXKFASNNAQFRSSSFGLQWNLXFDPATTXQTKKFKIPLSTGXXNQPSXRAXQLSSPSRIGSGPXPHPIIXXQC FCQTKFFIGTSLGGKQTTRTGQITIFGKTRETLPRIXXNPGYHRTGKTXRYLYSQGAYSVWQSNLXKNATSPHAYISTAXLTDVRWKSCE FRXXGKSXISPRXTTSKEKLAYSCYPLSYGWQIIWPSENSSHRDNKCTSAXWIQPLLGIXRHFNSXSXRIFGSNFPRSNRMXLPKEKXAY >In-frame_BAZ1A_ENST00000360310_chr14_35331250_-_LRRC9_ENST00000445360_chr14_60444735_+_997aa MPLLHRKPFVRQKPPADLRPDEEVFYCKVTNEIFRHYDDFFERTILCNSLVWSCAVTGRPGLTYQEALESEKKARQNLQSFPEPLIIPVL YLTSLTHRSRLHEICDDIFAYVKDRYFVEETVEVIRNNGARFCHGTKKLXLQCSAVQVVCLXSXPCFAGICCXIXVYYNGQGTLFIFCIQ QCYSRRKQKKPRSISIFQGFEIXXXSYKNGAQNQGPTKTDXFGXXNNTFPCKDXRLQSYCESESTWKQLEXIERSLQVNRTSKTKHXLXX IYLFRXCIPLVXPXIFGCKPXPCDNPXGIXRSDETEALRLELESTEKIWQXNKYVMQTHHKPSHSXYSTXSMAKASHIEAECYWQIKDSY PFKWSLHFXRRSNSSYEIYCRNKDYSVISLTAFXYXRGETTDTXYMAFCQNSDAGFKVRTSFTSEWKLLLEDNCLKFRWTTSFXNHKFRK IGKFEMGIIQQXXSHXNGGSGILYXLGRAHIRWKLHLKDRRYFQDDXINSPQHKXXSSHWLGRAYLXXHASSSLAFSXEQQNHFIEWFTK IFYSCXVIHKQXLYCCQSGDAQFKGFMQLGHSRHVWEHHYMESRKLPVVCNISSSRTESFGWDTNXTIRDXQCKRFVWWXTYFXHDCRTT RTFQLQTNARTKLDFIIYXNSGFDSSRPIXKCVXCESTEQSSYLIQWINLSTXCEGLMPXLXSYXINHAQTKASDSLNQXTTTVPESAFK WLWTARNFKNKQRYNEQXKFASNNAQFRSSSFGLQWNLXFDPATTXQTKKFKIPLSTGXXNQPSXRAXQLSSPSRIGSGPXPHPIIXXQC FCQTKFFIGTSLGGKQTTRTGQITIFGKTRETLPRIXXNPGYHRTGKTXRYLYSQGAYSVWQSNLXKNATSPHAYISTAXLTDVRWKSCE FRXXGKSXISPRXTTSKEKLAYSCYPLSYGWQIIWPSENSSHRDNKCTSAXWIQPLLGIXRHFNSXSXRIFGSNFPRSNRMXLPKEKXAY |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_BAZ1A_ENST00000358716_chr14_35331250_-_LRRC9_ENST00000445360_chr14_60444735_+_2992nt ATGCCGCTGCTACACCGAAAGCCGTTTGTGAGACAGAAGCCGCCCGCGGACCTGCGGCCCGACGAGGAAGTTTTCTACTGTAAAGTCACC AACGAGATCTTCCGCCACTACGATGACTTTTTTGAACGAACCATTCTGTGCAACAGCCTTGTGTGGAGTTGTGCTGTGACGGGTAGACCT GGACTGACGTATCAGGAAGCACTTGAGTCAGAAAAAAAAGCAAGACAGAATCTTCAGAGTTTTCCAGAACCACTAATTATTCCAGTTTTA TACTTGACCAGCCTTACCCATCGTTCGCGCTTACATGAAATTTGTGATGATATCTTTGCATATGTCAAGGATCGATATTTTGTCGAAGAA ACTGTGGAAGTCATTAGGAACAATGGTGCAAGATTCTGTCATGGGACAAAGAAACTGTGATTGCAGTGTTCGGCAGTGCAAGTGGTTTGT CTTTGATCATGACCTTGTTTTGCCGGAATATGTTGTTGAATTTGAGTATATTACAATGGTCAAGGCACCCTCTTTATTTTCTGTATTCAA CAATGTTATTCTAGAAGAAAGCAAAAAAAACCCAGAAGTATCAGTATTTTCCAAGGATTTGAAATTTGATGATGAAGTTATAAAAATGGA GCCCAGAATCAAGGCCCGACCAAAACTGATTAGTTTGGATGATAAAACAATACTTTCCCTTGCAAAGACTAGCGTTTACAGTCATATTGT GAGTCTGAATCTACATGGAAACAGCTTGAGTAAATTGAGAGATCTCTCCAAGTTAACAGGACTTCGAAAACTAAACATTAGCTTTAATGA ATTTACCTGTTTAGATGATGTATACCACTTGTATAACCTTGAATATTTGGATGCAAGCCATAACCATGTGATAACCCTTGAGGGATTTAG AGGTCTGATGAAACTGAAGCACTTAGACTTGAGCTGGAATCAACTGAAAAAATCTGGCAATGAAATAAATATGTTATGCAAACACACCAC AAGCCTTCTCACTCTTGATATTCAACATAATCCATGGCAAAAGCCAGCCACATTGAGGCTGAGTGTTATTGGCAGATTAAAGACTCTTAC CCATTTAAATGGAGTCTTCATTTCTGAAGAAGAAGCAACAGCAGCTATGAAATTTATTGCAGGAACAAGGATTACTCAGTTATCTCTCTT ACGGCATTCTAGTACTAAAGAGGAGAGACCACGGATACTTAGTATATGGCCTTCTGCCAAAATTCTGACGCAGGTTTCAAAGTTAGGACC TCATTTACATCTGAGTGGAAACTGCTACTTGAAGATAACTGCCTTAAATTTAGATGGACAACATCTTTTTGAAATCACAAATTTAGAAAA ATTGGAAAATTTGAAATGGGCATCATTCAGCAATAATAATCTCACTAAAATGGAGGGTCTGGAATCCTGTATTAACTTGGAAGAGCTCAC ATTAGATGGAAACTGCATCTCAAAGATAGAAGGTATTTCCAAGATGACTAAATTAACTCGCCTCAGCATAAATAATAATCTTCTCACTGG TTGGGAAGAGCATACCTTTGATAACATGCTTCATCTTCACTCGCTTTCTCTTGAGAACAACAGAATCACTTCATTGAGTGGTTTACAAAA ATCTTTTACTCTTGTTGAGTTATACATAAGCAATAACTATATTGCTGTCAATCAGGAGATGCACAATTTAAAGGGTTTATGCAACTTGGT CATTCTAGACATGTGTGGGAACATCATTATATGGAATCAAGAAAACTACCGGTTGTTTGTAATATTTCATCTTCCAGAACTGAAAGCTTT GGATGGGATACCAATTGAACCATCAGAGACTGACAGTGCAAAAGATTTGTTTGGTGGTAGACTTACTTCTGACATGATTGCAGAACGACA AGGACATTCCAACTTCAAACAAATGCAAGAACTAAATTGGACTTCATCATCTATTAGAACAGTGGATTTGATTCCAGTCGACCAATTTAG AAATGTGTGTAATGTGAATCTACAGAACAATCATCTTACCTCATTCAGTGGATTAATCTATCTACCTAATGTGAAGGTCTTATGCCTTAA CTATAATCATATTGAATCAATCATGCCCAGACTAAAGCCTCAGACTCACTTAACCAGTAGACAACTACTGTACCAGAAAGTGCCTTCAAG TGGCTATGGACAGCAAGGAATTTCAAAAACAAACAGAGATATAATGAGCAGTGAAAATTTGCCTCCAATAATGCACAGTTTAGAAGTTCT TCATTTGGGCTACAATGGAATTTGTAATTTGATCCAGCTACAACTTAACAGACTAAGAAATTTAAAATTCCTCTTTCTACAGGGTAATGA AATCAGCCAAGTTGAAGGGCTTGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGACCATAACCGCATCCGATCATTTAATGACAGTGC TTTTGCCAAACCAAGTTCTTTATTGGCACTTCACTTGGAGGAAAACAGACTACGAGAACTGGGCAAATTACAATCTTTGGTAAAACTAGA GAAACTCTTCCTAGGATATAATAAAATCCAGGATATCACAGAACTGGAAAAACTTGACGTTATCTCTACTCTCAGGGAGCTTACAGTGTA TGGCAATCCAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACTTACAGATGTTAGATGGAAGTCCTGTGAA TTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGCTTATTCCTGTTACCCACTCTCCTATGGA TGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGA CGTCACTTTAACTCCTGAAGTTGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATAC >In-frame_BAZ1A_ENST00000360310_chr14_35331250_-_LRRC9_ENST00000445360_chr14_60444735_+_2992nt ATGCCGCTGCTACACCGAAAGCCGTTTGTGAGACAGAAGCCGCCCGCGGACCTGCGGCCCGACGAGGAAGTTTTCTACTGTAAAGTCACC AACGAGATCTTCCGCCACTACGATGACTTTTTTGAACGAACCATTCTGTGCAACAGCCTTGTGTGGAGTTGTGCTGTGACGGGTAGACCT GGACTGACGTATCAGGAAGCACTTGAGTCAGAAAAAAAAGCAAGACAGAATCTTCAGAGTTTTCCAGAACCACTAATTATTCCAGTTTTA TACTTGACCAGCCTTACCCATCGTTCGCGCTTACATGAAATTTGTGATGATATCTTTGCATATGTCAAGGATCGATATTTTGTCGAAGAA ACTGTGGAAGTCATTAGGAACAATGGTGCAAGATTCTGTCATGGGACAAAGAAACTGTGATTGCAGTGTTCGGCAGTGCAAGTGGTTTGT CTTTGATCATGACCTTGTTTTGCCGGAATATGTTGTTGAATTTGAGTATATTACAATGGTCAAGGCACCCTCTTTATTTTCTGTATTCAA CAATGTTATTCTAGAAGAAAGCAAAAAAAACCCAGAAGTATCAGTATTTTCCAAGGATTTGAAATTTGATGATGAAGTTATAAAAATGGA GCCCAGAATCAAGGCCCGACCAAAACTGATTAGTTTGGATGATAAAACAATACTTTCCCTTGCAAAGACTAGCGTTTACAGTCATATTGT GAGTCTGAATCTACATGGAAACAGCTTGAGTAAATTGAGAGATCTCTCCAAGTTAACAGGACTTCGAAAACTAAACATTAGCTTTAATGA ATTTACCTGTTTAGATGATGTATACCACTTGTATAACCTTGAATATTTGGATGCAAGCCATAACCATGTGATAACCCTTGAGGGATTTAG AGGTCTGATGAAACTGAAGCACTTAGACTTGAGCTGGAATCAACTGAAAAAATCTGGCAATGAAATAAATATGTTATGCAAACACACCAC AAGCCTTCTCACTCTTGATATTCAACATAATCCATGGCAAAAGCCAGCCACATTGAGGCTGAGTGTTATTGGCAGATTAAAGACTCTTAC CCATTTAAATGGAGTCTTCATTTCTGAAGAAGAAGCAACAGCAGCTATGAAATTTATTGCAGGAACAAGGATTACTCAGTTATCTCTCTT ACGGCATTCTAGTACTAAAGAGGAGAGACCACGGATACTTAGTATATGGCCTTCTGCCAAAATTCTGACGCAGGTTTCAAAGTTAGGACC TCATTTACATCTGAGTGGAAACTGCTACTTGAAGATAACTGCCTTAAATTTAGATGGACAACATCTTTTTGAAATCACAAATTTAGAAAA ATTGGAAAATTTGAAATGGGCATCATTCAGCAATAATAATCTCACTAAAATGGAGGGTCTGGAATCCTGTATTAACTTGGAAGAGCTCAC ATTAGATGGAAACTGCATCTCAAAGATAGAAGGTATTTCCAAGATGACTAAATTAACTCGCCTCAGCATAAATAATAATCTTCTCACTGG TTGGGAAGAGCATACCTTTGATAACATGCTTCATCTTCACTCGCTTTCTCTTGAGAACAACAGAATCACTTCATTGAGTGGTTTACAAAA ATCTTTTACTCTTGTTGAGTTATACATAAGCAATAACTATATTGCTGTCAATCAGGAGATGCACAATTTAAAGGGTTTATGCAACTTGGT CATTCTAGACATGTGTGGGAACATCATTATATGGAATCAAGAAAACTACCGGTTGTTTGTAATATTTCATCTTCCAGAACTGAAAGCTTT GGATGGGATACCAATTGAACCATCAGAGACTGACAGTGCAAAAGATTTGTTTGGTGGTAGACTTACTTCTGACATGATTGCAGAACGACA AGGACATTCCAACTTCAAACAAATGCAAGAACTAAATTGGACTTCATCATCTATTAGAACAGTGGATTTGATTCCAGTCGACCAATTTAG AAATGTGTGTAATGTGAATCTACAGAACAATCATCTTACCTCATTCAGTGGATTAATCTATCTACCTAATGTGAAGGTCTTATGCCTTAA CTATAATCATATTGAATCAATCATGCCCAGACTAAAGCCTCAGACTCACTTAACCAGTAGACAACTACTGTACCAGAAAGTGCCTTCAAG TGGCTATGGACAGCAAGGAATTTCAAAAACAAACAGAGATATAATGAGCAGTGAAAATTTGCCTCCAATAATGCACAGTTTAGAAGTTCT TCATTTGGGCTACAATGGAATTTGTAATTTGATCCAGCTACAACTTAACAGACTAAGAAATTTAAAATTCCTCTTTCTACAGGGTAATGA AATCAGCCAAGTTGAAGGGCTTGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGACCATAACCGCATCCGATCATTTAATGACAGTGC TTTTGCCAAACCAAGTTCTTTATTGGCACTTCACTTGGAGGAAAACAGACTACGAGAACTGGGCAAATTACAATCTTTGGTAAAACTAGA GAAACTCTTCCTAGGATATAATAAAATCCAGGATATCACAGAACTGGAAAAACTTGACGTTATCTCTACTCTCAGGGAGCTTACAGTGTA TGGCAATCCAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACTTACAGATGTTAGATGGAAGTCCTGTGAA TTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGCTTATTCCTGTTACCCACTCTCCTATGGA TGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGA CGTCACTTTAACTCCTGAAGTTGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATAC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_BAZ1A_ENST00000358716_chr14_35331250_-_LRRC9_ENST00000445360_chr14_60444735_+_3711nt CTTTTCCCATCGTGTAGTCAAGAGTCTGTGCCAGACTTGAAGGCTTTACTTTGTTAGCCATGTGTTTATGAACCCCCAGCGCTTTCCCTA GATCTTTTGGCTGATAATCTCAAACATGGAGGATGCTTCTGAATCTTCACGAGGGGTTGCTCCATTAATTAATAATGTAGTTCTCCCAGG CTCTCCGCTGTCTCTTCCTGTATCAGTGACAGGCTGTAAAAGTCATCGAGTAGCCAATAAAAAGGTAGAAGCGAGGAGTGAAAAGCTCCT CCCAACAGCTCTTCCTCCTTCAGAGCCGAAAGTAGATCAGAAACTTCCCAGGAGCTCCGAGAGGCGGGGAAGTGGCGGTGGGACGCAATT CCCCGCGCGGAGTCGGGCAGTGGCAGCGGGAGAAGCGGCAGCCAGGGGCGCGGCGGGGCCGGAGAGAGGCGGTCCCCTGGGAGGACGGGG TCTCCCCTCGTTGCCTTTGTAGTGGAGAAGGTGGACAAGTGGCAGTCGGCGTGATCGCAGGGAAGCGGGGCCGGCGCGGGCGGCCGAGGG TCCAGGCGAGCCCGCGGGCGGACGGGAGATGCCGCTGCTACACCGAAAGCCGTTTGTGAGACAGAAGCCGCCCGCGGACCTGCGGCCCGA CGAGGAAGTTTTCTACTGTAAAGTCACCAACGAGATCTTCCGCCACTACGATGACTTTTTTGAACGAACCATTCTGTGCAACAGCCTTGT GTGGAGTTGTGCTGTGACGGGTAGACCTGGACTGACGTATCAGGAAGCACTTGAGTCAGAAAAAAAAGCAAGACAGAATCTTCAGAGTTT TCCAGAACCACTAATTATTCCAGTTTTATACTTGACCAGCCTTACCCATCGTTCGCGCTTACATGAAATTTGTGATGATATCTTTGCATA TGTCAAGGATCGATATTTTGTCGAAGAAACTGTGGAAGTCATTAGGAACAATGGTGCAAGATTCTGTCATGGGACAAAGAAACTGTGATT GCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTGATCATGACCTTGTTTTGCCGGAATATGTTGTTGAATTTGAGTATATTACAATGGTCA AGGCACCCTCTTTATTTTCTGTATTCAACAATGTTATTCTAGAAGAAAGCAAAAAAAACCCAGAAGTATCAGTATTTTCCAAGGATTTGA AATTTGATGATGAAGTTATAAAAATGGAGCCCAGAATCAAGGCCCGACCAAAACTGATTAGTTTGGATGATAAAACAATACTTTCCCTTG CAAAGACTAGCGTTTACAGTCATATTGTGAGTCTGAATCTACATGGAAACAGCTTGAGTAAATTGAGAGATCTCTCCAAGTTAACAGGAC TTCGAAAACTAAACATTAGCTTTAATGAATTTACCTGTTTAGATGATGTATACCACTTGTATAACCTTGAATATTTGGATGCAAGCCATA ACCATGTGATAACCCTTGAGGGATTTAGAGGTCTGATGAAACTGAAGCACTTAGACTTGAGCTGGAATCAACTGAAAAAATCTGGCAATG AAATAAATATGTTATGCAAACACACCACAAGCCTTCTCACTCTTGATATTCAACATAATCCATGGCAAAAGCCAGCCACATTGAGGCTGA GTGTTATTGGCAGATTAAAGACTCTTACCCATTTAAATGGAGTCTTCATTTCTGAAGAAGAAGCAACAGCAGCTATGAAATTTATTGCAG GAACAAGGATTACTCAGTTATCTCTCTTACGGCATTCTAGTACTAAAGAGGAGAGACCACGGATACTTAGTATATGGCCTTCTGCCAAAA TTCTGACGCAGGTTTCAAAGTTAGGACCTCATTTACATCTGAGTGGAAACTGCTACTTGAAGATAACTGCCTTAAATTTAGATGGACAAC ATCTTTTTGAAATCACAAATTTAGAAAAATTGGAAAATTTGAAATGGGCATCATTCAGCAATAATAATCTCACTAAAATGGAGGGTCTGG AATCCTGTATTAACTTGGAAGAGCTCACATTAGATGGAAACTGCATCTCAAAGATAGAAGGTATTTCCAAGATGACTAAATTAACTCGCC TCAGCATAAATAATAATCTTCTCACTGGTTGGGAAGAGCATACCTTTGATAACATGCTTCATCTTCACTCGCTTTCTCTTGAGAACAACA GAATCACTTCATTGAGTGGTTTACAAAAATCTTTTACTCTTGTTGAGTTATACATAAGCAATAACTATATTGCTGTCAATCAGGAGATGC ACAATTTAAAGGGTTTATGCAACTTGGTCATTCTAGACATGTGTGGGAACATCATTATATGGAATCAAGAAAACTACCGGTTGTTTGTAA TATTTCATCTTCCAGAACTGAAAGCTTTGGATGGGATACCAATTGAACCATCAGAGACTGACAGTGCAAAAGATTTGTTTGGTGGTAGAC TTACTTCTGACATGATTGCAGAACGACAAGGACATTCCAACTTCAAACAAATGCAAGAACTAAATTGGACTTCATCATCTATTAGAACAG TGGATTTGATTCCAGTCGACCAATTTAGAAATGTGTGTAATGTGAATCTACAGAACAATCATCTTACCTCATTCAGTGGATTAATCTATC TACCTAATGTGAAGGTCTTATGCCTTAACTATAATCATATTGAATCAATCATGCCCAGACTAAAGCCTCAGACTCACTTAACCAGTAGAC AACTACTGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAGCAAGGAATTTCAAAAACAAACAGAGATATAATGAGCAGTGAAAATTTGC CTCCAATAATGCACAGTTTAGAAGTTCTTCATTTGGGCTACAATGGAATTTGTAATTTGATCCAGCTACAACTTAACAGACTAAGAAATT TAAAATTCCTCTTTCTACAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGACCATA ACCGCATCCGATCATTTAATGACAGTGCTTTTGCCAAACCAAGTTCTTTATTGGCACTTCACTTGGAGGAAAACAGACTACGAGAACTGG GCAAATTACAATCTTTGGTAAAACTAGAGAAACTCTTCCTAGGATATAATAAAATCCAGGATATCACAGAACTGGAAAAACTTGACGTTA TCTCTACTCTCAGGGAGCTTACAGTGTATGGCAATCCAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACT TACAGATGTTAGATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGC TTATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTA GTGGATTCAGCCATTACTTGGGATCTGACGTCACTTTAACTCCTGAAGTTGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAAT GTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGGTCAGTTAAAAAA AAAAAAAAAAGATAATCATGTTACTTAAGTTACTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGATTTAA >In-frame_BAZ1A_ENST00000360310_chr14_35331250_-_LRRC9_ENST00000445360_chr14_60444735_+_3711nt CTTTTCCCATCGTGTAGTCAAGAGTCTGTGCCAGACTTGAAGGCTTTACTTTGTTAGCCATGTGTTTATGAACCCCCAGCGCTTTCCCTA GATCTTTTGGCTGATAATCTCAAACATGGAGGATGCTTCTGAATCTTCACGAGGGGTTGCTCCATTAATTAATAATGTAGTTCTCCCAGG CTCTCCGCTGTCTCTTCCTGTATCAGTGACAGGCTGTAAAAGTCATCGAGTAGCCAATAAAAAGGTAGAAGCGAGGAGTGAAAAGCTCCT CCCAACAGCTCTTCCTCCTTCAGAGCCGAAAGTAGATCAGAAACTTCCCAGGAGCTCCGAGAGGCGGGGAAGTGGCGGTGGGACGCAATT CCCCGCGCGGAGTCGGGCAGTGGCAGCGGGAGAAGCGGCAGCCAGGGGCGCGGCGGGGCCGGAGAGAGGCGGTCCCCTGGGAGGACGGGG TCTCCCCTCGTTGCCTTTGTAGTGGAGAAGGTGGACAAGTGGCAGTCGGCGTGATCGCAGGGAAGCGGGGCCGGCGCGGGCGGCCGAGGG TCCAGGCGAGCCCGCGGGCGGACGGGAGATGCCGCTGCTACACCGAAAGCCGTTTGTGAGACAGAAGCCGCCCGCGGACCTGCGGCCCGA CGAGGAAGTTTTCTACTGTAAAGTCACCAACGAGATCTTCCGCCACTACGATGACTTTTTTGAACGAACCATTCTGTGCAACAGCCTTGT GTGGAGTTGTGCTGTGACGGGTAGACCTGGACTGACGTATCAGGAAGCACTTGAGTCAGAAAAAAAAGCAAGACAGAATCTTCAGAGTTT TCCAGAACCACTAATTATTCCAGTTTTATACTTGACCAGCCTTACCCATCGTTCGCGCTTACATGAAATTTGTGATGATATCTTTGCATA TGTCAAGGATCGATATTTTGTCGAAGAAACTGTGGAAGTCATTAGGAACAATGGTGCAAGATTCTGTCATGGGACAAAGAAACTGTGATT GCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTGATCATGACCTTGTTTTGCCGGAATATGTTGTTGAATTTGAGTATATTACAATGGTCA AGGCACCCTCTTTATTTTCTGTATTCAACAATGTTATTCTAGAAGAAAGCAAAAAAAACCCAGAAGTATCAGTATTTTCCAAGGATTTGA AATTTGATGATGAAGTTATAAAAATGGAGCCCAGAATCAAGGCCCGACCAAAACTGATTAGTTTGGATGATAAAACAATACTTTCCCTTG CAAAGACTAGCGTTTACAGTCATATTGTGAGTCTGAATCTACATGGAAACAGCTTGAGTAAATTGAGAGATCTCTCCAAGTTAACAGGAC TTCGAAAACTAAACATTAGCTTTAATGAATTTACCTGTTTAGATGATGTATACCACTTGTATAACCTTGAATATTTGGATGCAAGCCATA ACCATGTGATAACCCTTGAGGGATTTAGAGGTCTGATGAAACTGAAGCACTTAGACTTGAGCTGGAATCAACTGAAAAAATCTGGCAATG AAATAAATATGTTATGCAAACACACCACAAGCCTTCTCACTCTTGATATTCAACATAATCCATGGCAAAAGCCAGCCACATTGAGGCTGA GTGTTATTGGCAGATTAAAGACTCTTACCCATTTAAATGGAGTCTTCATTTCTGAAGAAGAAGCAACAGCAGCTATGAAATTTATTGCAG GAACAAGGATTACTCAGTTATCTCTCTTACGGCATTCTAGTACTAAAGAGGAGAGACCACGGATACTTAGTATATGGCCTTCTGCCAAAA TTCTGACGCAGGTTTCAAAGTTAGGACCTCATTTACATCTGAGTGGAAACTGCTACTTGAAGATAACTGCCTTAAATTTAGATGGACAAC ATCTTTTTGAAATCACAAATTTAGAAAAATTGGAAAATTTGAAATGGGCATCATTCAGCAATAATAATCTCACTAAAATGGAGGGTCTGG AATCCTGTATTAACTTGGAAGAGCTCACATTAGATGGAAACTGCATCTCAAAGATAGAAGGTATTTCCAAGATGACTAAATTAACTCGCC TCAGCATAAATAATAATCTTCTCACTGGTTGGGAAGAGCATACCTTTGATAACATGCTTCATCTTCACTCGCTTTCTCTTGAGAACAACA GAATCACTTCATTGAGTGGTTTACAAAAATCTTTTACTCTTGTTGAGTTATACATAAGCAATAACTATATTGCTGTCAATCAGGAGATGC ACAATTTAAAGGGTTTATGCAACTTGGTCATTCTAGACATGTGTGGGAACATCATTATATGGAATCAAGAAAACTACCGGTTGTTTGTAA TATTTCATCTTCCAGAACTGAAAGCTTTGGATGGGATACCAATTGAACCATCAGAGACTGACAGTGCAAAAGATTTGTTTGGTGGTAGAC TTACTTCTGACATGATTGCAGAACGACAAGGACATTCCAACTTCAAACAAATGCAAGAACTAAATTGGACTTCATCATCTATTAGAACAG TGGATTTGATTCCAGTCGACCAATTTAGAAATGTGTGTAATGTGAATCTACAGAACAATCATCTTACCTCATTCAGTGGATTAATCTATC TACCTAATGTGAAGGTCTTATGCCTTAACTATAATCATATTGAATCAATCATGCCCAGACTAAAGCCTCAGACTCACTTAACCAGTAGAC AACTACTGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAGCAAGGAATTTCAAAAACAAACAGAGATATAATGAGCAGTGAAAATTTGC CTCCAATAATGCACAGTTTAGAAGTTCTTCATTTGGGCTACAATGGAATTTGTAATTTGATCCAGCTACAACTTAACAGACTAAGAAATT TAAAATTCCTCTTTCTACAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGACCATA ACCGCATCCGATCATTTAATGACAGTGCTTTTGCCAAACCAAGTTCTTTATTGGCACTTCACTTGGAGGAAAACAGACTACGAGAACTGG GCAAATTACAATCTTTGGTAAAACTAGAGAAACTCTTCCTAGGATATAATAAAATCCAGGATATCACAGAACTGGAAAAACTTGACGTTA TCTCTACTCTCAGGGAGCTTACAGTGTATGGCAATCCAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACT TACAGATGTTAGATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGC TTATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTA GTGGATTCAGCCATTACTTGGGATCTGACGTCACTTTAACTCCTGAAGTTGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAAT GTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGGTCAGTTAAAAAA AAAAAAAAAAGATAATCATGTTACTTAAGTTACTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGATTTAA |
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FusionGenePPI for BAZ1A_LRRC9 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
BAZ1A | SMARCA5, POLE3, BAZ1B, SATB1, SMARCA2, CHRAC1, NCOR1, XRCC5, XRCC6, SMARCAD1, ELAVL1, GRK5, RBBP4, SMAD9, SMAD2, CCDC8, SUMO2, SRPK2, RHOA, CCDC22, UGGT1, MAX, TEAD2, FOXE1, HIST1H4A, H2AFX, HIST1H3A, HIST1H2BB, FOXL1, BMI1, CAPN6, MECP2, MTNR1A | LRRC9 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000358716 | - | 3 | 26 | 667_933 | 130 | 1525 | SMARCA5 |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000360310 | - | 3 | 27 | 667_933 | 130 | 1557 | SMARCA5 |
Hgene | BAZ1A | chr14:35331250 | chr14:60444735 | ENST00000382422 | - | 2 | 26 | 667_933 | 130 | 1557 | SMARCA5 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for BAZ1A_LRRC9 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for BAZ1A_LRRC9 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |