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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 38311

FusionGeneSummary for TMCO3_SPACA7

check button Fusion gene summary
Fusion gene informationFusion gene name: TMCO3_SPACA7
Fusion gene ID: 38311
HgeneTgene
Gene symbol

TMCO3

SPACA7

Gene ID

55002

122258

Gene nametransmembrane and coiled-coil domains 3sperm acrosome associated 7
SynonymsC13orf11C13orf28
Cytomap

13q34

13q34

Type of geneprotein-codingprotein-coding
Descriptiontransmembrane and coiled-coil domain-containing protein 3putative LAG1-interacting proteinsperm acrosome-associated protein 7protein SPACA7
Modification date2018051920180522
UniProtAcc

Q6UWJ1

Q96KW9

Ensembl transtripts involved in fusion geneENST00000434316, ENST00000375391, 
ENST00000474393, 
ENST00000283550, 
ENST00000375699, 
Fusion gene scores* DoF score8 X 6 X 5=2403 X 3 X 3=27
# samples 83
** MAII scorelog2(8/240*10)=-1.58496250072116
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(3/27*10)=0.15200309344505
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: TMCO3 [Title/Abstract] AND SPACA7 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDLUSCTCGA-98-A53C-01ATMCO3chr13

114164739

+SPACA7chr13

113047335

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000434316ENST00000283550TMCO3chr13

114164739

+SPACA7chr13

113047335

+
5CDS-intronENST00000434316ENST00000375699TMCO3chr13

114164739

+SPACA7chr13

113047335

+
In-frameENST00000375391ENST00000283550TMCO3chr13

114164739

+SPACA7chr13

113047335

+
5CDS-intronENST00000375391ENST00000375699TMCO3chr13

114164739

+SPACA7chr13

113047335

+
3UTR-3CDSENST00000474393ENST00000283550TMCO3chr13

114164739

+SPACA7chr13

113047335

+
3UTR-intronENST00000474393ENST00000375699TMCO3chr13

114164739

+SPACA7chr13

113047335

+

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FusionProtFeatures for TMCO3_SPACA7


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
TMCO3

Q6UWJ1

SPACA7

Q96KW9

Probable Na(+)/H(+) antiporter. {ECO:0000250}. Involved in fertilization. Seems not to play a directrole in sperm-egg binding or gamete fusion.{ECO:0000250|UniProtKB:Q9D2S4}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78124_204408415Coiled coilOntology_term=ECO:0000255
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713124_204408678Coiled coilOntology_term=ECO:0000255
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78221_224408415Compositional biasNote=Poly-Glu
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713221_224408678Compositional biasNote=Poly-Glu
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78286_306408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78317_337408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78350_370408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713286_306408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713317_337408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713350_370408678TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78416_436408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78456_476408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78498_518408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78554_574408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78578_598408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78608_628408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000375391+78640_660408415TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713416_436408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713456_476408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713498_518408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713554_574408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713578_598408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713608_628408678TransmembraneHelical
HgeneTMCO3chr13:114164739chr13:113047335ENST00000434316+713640_660408678TransmembraneHelical


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FusionGeneSequence for TMCO3_SPACA7


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_TMCO3_ENST00000434316_chr13_114164739_+_SPACA7_ENST00000283550_chr13_113047335_+_573aa
MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGLLRQKNAVLNKLKTAIGAVEKDVGLSDEEKL
FQVHTFEIFQKELNESENSVFQAVYGLQRALQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDLGLSMLIDSQNNQYILTKPRDSTIPRADHHF
IKDIVTIGMLSLPCGWLCTAIGLPTMFGYIICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGSPTEIPFSSKQEDMSELLDEILVQEILDLNKTTPSEMPSTA
STLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEVKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLSIL

>In-frame_TMCO3_ENST00000375391_chr13_114164739_+_SPACA7_ENST00000283550_chr13_113047335_+_573aa
MKVLGRSFFWVLFPVLPWAVQAVEHEEVAQRVIKLHRGRGVAAMQSRQWVRDSCRKLSGLLRQKNAVLNKLKTAIGAVEKDVGLSDEEKL
FQVHTFEIFQKELNESENSVFQAVYGLQRALQGDYKDVVNMKESSRQRLEALREAAIKEETEYMELLAAEKHQVEALKNMQHQNQSLSML
DEILEDVRKAADRLEEEIEEHAFDDNKSVKGVNFEAVLRVEEEEANSKQNITKREVEDDLGLSMLIDSQNNQYILTKPRDSTIPRADHHF
IKDIVTIGMLSLPCGWLCTAIGLPTMFGYIICGVLLGPSGLNSIKSIVQVETLGEFGVFFTLFLVGLEFSPEKLRKVWKISLQGPCYMTL
LMIAFGLLWGHLLRIKPTQSVFISTCLSLSSTPLVSRFLMGSARGDKEGSPTEIPFSSKQEDMSELLDEILVQEILDLNKTTPSEMPSTA
STLSTPLHAGIDENYQAGGSENYHELLENLQFSPGIEVKISNDEANANANLHGDPSENYRGPQVSPGSEKSVSSKEKNSKNTQYENLSIL


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_TMCO3_ENST00000434316_chr13_114164739_+_SPACA7_ENST00000283550_chr13_113047335_+_1719nt
ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCACGAGGAGGTGGCGCAG
CGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTT
CTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTG
TTTCAGGTGCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCC
CTGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAGGAAGAA
ACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCAAAACCAAAGTTTATCCATGCTT
GACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAG
GGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAAGAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTG
GGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTT
ATAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATGTTTGGTTATATT
ATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTT
ACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAAAGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTG
TTAATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCA
AGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGTTCACCTACTGAAATACCATTCAGTTCAAAACAG
GAGGATATGTCTGAATTATTAGATGAAATTCTGGTCCAGGAGATTTTAGATCTGAATAAAACAACACCGAGCGAAATGCCAAGTACAGCA
TCAACATTATCAACACCGTTACATGCTGGTATTGATGAGAATTATCAAGCTGGTGGTTCTGAGAATTACCATGAATTATTAGAGAATTTA
CAATTCTCTCCTGGCATTGAGGTCAAAATTTCCAATGATGAAGCCAATGCTAATGCAAATCTCCATGGCGATCCTTCTGAGAATTATCGT
GGGCCACAGGTGTCTCCTGGCAGTGAGAAGAGTGTTTCCAGTAAAGAAAAGAATTCAAAGAACACTCAGTATGAAAATCTATCCATTCTG
GACCAAATCCTTCAAAATATTGGAAGATCTTCAGGAAACATTTTCCATAAAGAGCAGCAGAGGACCAGCGCACAGAGGAGGAGCCAAGGC

>In-frame_TMCO3_ENST00000375391_chr13_114164739_+_SPACA7_ENST00000283550_chr13_113047335_+_1719nt
ATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCACGAGGAGGTGGCGCAG
CGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTT
CTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTG
TTTCAGGTGCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCC
CTGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAGGAAGAA
ACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCAAAACCAAAGTTTATCCATGCTT
GACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAG
GGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAAGAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTG
GGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTT
ATAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATGTTTGGTTATATT
ATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTT
ACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAAAGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTG
TTAATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCA
AGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGTTCACCTACTGAAATACCATTCAGTTCAAAACAG
GAGGATATGTCTGAATTATTAGATGAAATTCTGGTCCAGGAGATTTTAGATCTGAATAAAACAACACCGAGCGAAATGCCAAGTACAGCA
TCAACATTATCAACACCGTTACATGCTGGTATTGATGAGAATTATCAAGCTGGTGGTTCTGAGAATTACCATGAATTATTAGAGAATTTA
CAATTCTCTCCTGGCATTGAGGTCAAAATTTCCAATGATGAAGCCAATGCTAATGCAAATCTCCATGGCGATCCTTCTGAGAATTATCGT
GGGCCACAGGTGTCTCCTGGCAGTGAGAAGAGTGTTTCCAGTAAAGAAAAGAATTCAAAGAACACTCAGTATGAAAATCTATCCATTCTG
GACCAAATCCTTCAAAATATTGGAAGATCTTCAGGAAACATTTTCCATAAAGAGCAGCAGAGGACCAGCGCACAGAGGAGGAGCCAAGGC


* Fusion transcript sequences (Full-length transcript).
>In-frame_TMCO3_ENST00000434316_chr13_114164739_+_SPACA7_ENST00000283550_chr13_113047335_+_2218nt
AAAGGGGGCAGTGACTGCGGCTGGGCGGGAGTCCGGGTCGGCTTGGCTGAGCGGGGGCGGTGCTGGGCAGGGCGGCGGCCGCTCCCTCCC
GGACTCCCGGCCTCCCGGCCTCCCTGGTCCCGCCTGGGAAGGGATGCAAGGAAGCCCTCCGGCGCTGCGCTCCGAGGCGGGAGACAGCGT
CCCCCTCCGCCCCTCGGGTCCTGGCGCCTCAGAGCCCGGCCCAGGCCGCGGAACGGTGATGCTCGGGCCGGACGGGCGGGCGCGGATCCC
TGCGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAGAGACCCGTGGATTGCTGTGCCCTGCCCTCCGGACCTGGATCA
TGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTCCCTGGGCGGTGCAGGCTGTGGAGCACGAGGAGGTGGCGCAGC
GTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCCGGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTC
TCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAGCAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGT
TTCAGGTGCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTGAAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCC
TGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGCAGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAGGAAGAAA
CAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCCTTAAAAATATGCAACATCAAAACCAAAGTTTATCCATGCTTG
ACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAGAGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGG
GGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAAGAAGAGGCCAATTCTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGG
GTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCAAGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTA
TAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGCTATGTACAGCCATAGGATTGCCTACAATGTTTGGTTATATTA
TTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTATTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTTA
CTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAAAGGTGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGT
TAATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAACCCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAA
GCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACAAAGAAGGTTCACCTACTGAAATACCATTCAGTTCAAAACAGG
AGGATATGTCTGAATTATTAGATGAAATTCTGGTCCAGGAGATTTTAGATCTGAATAAAACAACACCGAGCGAAATGCCAAGTACAGCAT
CAACATTATCAACACCGTTACATGCTGGTATTGATGAGAATTATCAAGCTGGTGGTTCTGAGAATTACCATGAATTATTAGAGAATTTAC
AATTCTCTCCTGGCATTGAGGTCAAAATTTCCAATGATGAAGCCAATGCTAATGCAAATCTCCATGGCGATCCTTCTGAGAATTATCGTG
GGCCACAGGTGTCTCCTGGCAGTGAGAAGAGTGTTTCCAGTAAAGAAAAGAATTCAAAGAACACTCAGTATGAAAATCTATCCATTCTGG
ACCAAATCCTTCAAAATATTGGAAGATCTTCAGGAAACATTTTCCATAAAGAGCAGCAGAGGACCAGCGCACAGAGGAGGAGCCAAGGCA
GTCAGTGAGGCCGCAGCCCCAGACCCCCTGCGCAGGAGAGGAGCCTGCTAGAACCCCCACCCACCAGCCTCCGGAACAGGGCACTTGTGT

>In-frame_TMCO3_ENST00000375391_chr13_114164739_+_SPACA7_ENST00000283550_chr13_113047335_+_2170nt
GAGCGGGGGCGGTGCTGGGCAGGGCGGCGGCCGCTCCCTCCCGGACTCCCGGCCTCCCGGCCTCCCTGGTCCCGCCTGGGAAGGGATGCA
AGGAAGCCCTCCGGCGCTGCGCTCCGAGGCGGGAGACAGCGTCCCCCTCCGCCCCTCGGGTCCTGGCGCCTCAGAGCCCGGCCCAGGCCG
CGGAACGGTGATGCTCGGGCCGGACGGGCGGGCGCGGATCCCTGCGTCCCGCTGAAAATGTGTGTCTGACATGCAAGCTCAGTGGGGCAG
AGACCCGTGGATTGCTGTGCCCTGCCCTCCGGACCTGGATCATGAAGGTGTTGGGAAGAAGCTTCTTCTGGGTGCTGTTTCCCGTCCTTC
CCTGGGCGGTGCAGGCTGTGGAGCACGAGGAGGTGGCGCAGCGTGTGATCAAACTGCACCGCGGGCGAGGGGTGGCTGCCATGCAGAGCC
GGCAGTGGGTCCGGGACAGCTGCAGGAAGCTCTCAGGGCTTCTCCGCCAGAAGAATGCAGTTCTGAACAAACTGAAAACTGCAATTGGAG
CAGTGGAGAAAGACGTGGGCCTGTCGGATGAAGAGAAACTGTTTCAGGTGCACACGTTTGAAATTTTCCAGAAAGAGCTGAATGAAAGTG
AAAATTCCGTTTTCCAAGCTGTCTACGGACTGCAGAGAGCCCTGCAGGGGGATTACAAAGATGTCGTGAACATGAAGGAGAGCAGCCGGC
AGCGCCTGGAGGCCCTGAGAGAGGCTGCAATAAAGGAAGAAACAGAATATATGGAACTTCTGGCAGCAGAAAAACATCAAGTTGAAGCCC
TTAAAAATATGCAACATCAAAACCAAAGTTTATCCATGCTTGACGAGATTCTTGAAGATGTAAGAAAGGCAGCGGATCGTCTGGAGGAAG
AGATAGAGGAACATGCTTTTGACGACAATAAATCAGTCAAGGGGGTCAATTTTGAGGCAGTTCTGAGGGTGGAGGAAGAAGAGGCCAATT
CTAAGCAAAATATAACAAAACGAGAAGTGGAGGATGACTTGGGTCTTAGCATGCTGATTGACTCCCAGAACAACCAGTATATTTTGACCA
AGCCCAGAGATTCAACCATCCCACGTGCAGATCACCACTTTATAAAGGACATTGTTACCATAGGAATGCTGTCCTTGCCTTGTGGCTGGC
TATGTACAGCCATAGGATTGCCTACAATGTTTGGTTATATTATTTGTGGTGTACTTCTGGGACCTTCAGGACTAAATAGTATTAAGTCTA
TTGTGCAAGTGGAGACATTAGGAGAATTTGGGGTGTTTTTTACTCTTTTTCTTGTTGGCTTAGAATTTTCTCCAGAAAAGCTAAGAAAGG
TGTGGAAGATTTCCTTACAAGGGCCGTGTTACATGACACTGTTAATGATTGCATTTGGCTTGCTGTGGGGGCATCTCTTGCGGATCAAAC
CCACGCAGAGCGTCTTCATTTCCACGTGTCTGTCCTTGTCAAGCACACCCCTCGTGTCCAGGTTCCTCATGGGCAGTGCTCGGGGTGACA
AAGAAGGTTCACCTACTGAAATACCATTCAGTTCAAAACAGGAGGATATGTCTGAATTATTAGATGAAATTCTGGTCCAGGAGATTTTAG
ATCTGAATAAAACAACACCGAGCGAAATGCCAAGTACAGCATCAACATTATCAACACCGTTACATGCTGGTATTGATGAGAATTATCAAG
CTGGTGGTTCTGAGAATTACCATGAATTATTAGAGAATTTACAATTCTCTCCTGGCATTGAGGTCAAAATTTCCAATGATGAAGCCAATG
CTAATGCAAATCTCCATGGCGATCCTTCTGAGAATTATCGTGGGCCACAGGTGTCTCCTGGCAGTGAGAAGAGTGTTTCCAGTAAAGAAA
AGAATTCAAAGAACACTCAGTATGAAAATCTATCCATTCTGGACCAAATCCTTCAAAATATTGGAAGATCTTCAGGAAACATTTTCCATA
AAGAGCAGCAGAGGACCAGCGCACAGAGGAGGAGCCAAGGCAGTCAGTGAGGCCGCAGCCCCAGACCCCCTGCGCAGGAGAGGAGCCTGC
TAGAACCCCCACCCACCAGCCTCCGGAACAGGGCACTTGTGTGCACACGCCCACGTTCTCTGAACCATTCCACATAAAGGAAAATCGTTT


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FusionGenePPI for TMCO3_SPACA7


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
TMCO3EGFR, ELAVL1, HSPB1, GLP1R, TAP2, FNDC5, COG4, IFT57, HEMK1, SLC25A17, TYK2, PSME2, ATG9A, PXMP2, PIGQ, SQLE, GUF1, POTEF, CUL4B, ATP13A2, SREBF2, TUBB8, FADS1, TUBB3, DPH6, TUBA4A, ATP13A3, CUL4A, ADCK2, STX17, SLC26A6, DCAF8, SLC25A6, GGCX, AGPAT5, TMBIM6, DNAAF5, TMEM259, METTL13, TRIM25SPACA7HSPB1, KRAS


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for TMCO3_SPACA7


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TMCO3_SPACA7


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource