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Fusion gene ID: 38283 |
FusionGeneSummary for TMC5_TMC5 |
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Fusion gene information | Fusion gene name: TMC5_TMC5 | Fusion gene ID: 38283 | Hgene | Tgene | Gene symbol | TMC5 | TMC5 | Gene ID | 79838 | 79838 |
Gene name | transmembrane channel like 5 | transmembrane channel like 5 | |
Synonyms | - | - | |
Cytomap | 16p12.3 | 16p12.3 | |
Type of gene | protein-coding | protein-coding | |
Description | transmembrane channel-like protein 5 | transmembrane channel-like protein 5 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q6UXY8 | Q6UXY8 | |
Ensembl transtripts involved in fusion gene | ENST00000563675, ENST00000541464, ENST00000381414, ENST00000396229, ENST00000542583, ENST00000219821, ENST00000561503, ENST00000564959, | ENST00000563675, ENST00000541464, ENST00000381414, ENST00000396229, ENST00000542583, ENST00000219821, ENST00000561503, ENST00000564959, | |
Fusion gene scores | * DoF score | 5 X 4 X 4=80 | 6 X 8 X 3=144 |
# samples | 6 | 7 | |
** MAII score | log2(6/80*10)=-0.415037499278844 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/144*10)=-1.04064198449735 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TMC5 [Title/Abstract] AND TMC5 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | AW856759 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - | ||
ChiTaRS3.1 | AI344053 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000563675 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000541464 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000381414 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000396229 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000542583 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000219821 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000561503 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000563675 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000541464 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000381414 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000396229 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000542583 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000219821 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000561503 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000564959 | ENST00000564959 | TMC5 | chr16 | 19475715 | - | TMC5 | chr16 | 19485826 | - |
intron-intron | ENST00000563675 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000563675 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000563675 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000563675 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000563675 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000563675 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000563675 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000563675 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
5UTR-intron | ENST00000541464 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000381414 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000396229 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000542583 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000219821 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000561503 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000563675 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000541464 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000381414 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000396229 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000542583 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000219821 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000561503 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
intron-intron | ENST00000564959 | ENST00000564959 | TMC5 | chr16 | 19421962 | - | TMC5 | chr16 | 19498338 | - |
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FusionProtFeatures for TMC5_TMC5 |
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Hgene | Tgene |
TMC5 | TMC5 |
Probable ion channel. {ECO:0000250}. | Probable ion channel. {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for TMC5_TMC5 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for TMC5_TMC5 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TMC5_TMC5 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TMC5_TMC5 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |