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Fusion gene ID: 37321 |
FusionGeneSummary for TBC1D14_MRFAP1 |
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Fusion gene information | Fusion gene name: TBC1D14_MRFAP1 | Fusion gene ID: 37321 | Hgene | Tgene | Gene symbol | TBC1D14 | MRFAP1 | Gene ID | 57533 | 93621 |
Gene name | TBC1 domain family member 14 | Morf4 family associated protein 1 | |
Synonyms | - | PAM14|PGR1 | |
Cytomap | 4p16.1 | 4p16.1 | |
Type of gene | protein-coding | protein-coding | |
Description | TBC1 domain family member 14 | MORF4 family-associated protein 1Mof4 family associated protein 1T-cell activation proteinprotein associated with MRG of 14 kDa | |
Modification date | 20180523 | 20180522 | |
UniProtAcc | Q9P2M4 | Q9Y605 | |
Ensembl transtripts involved in fusion gene | ENST00000448507, ENST00000409757, ENST00000410031, ENST00000451522, ENST00000446947, | ENST00000320912, ENST00000507420, ENST00000382581, | |
Fusion gene scores | * DoF score | 7 X 4 X 8=224 | 6 X 5 X 4=120 |
# samples | 9 | 6 | |
** MAII score | log2(9/224*10)=-1.31550182572793 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/120*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: TBC1D14 [Title/Abstract] AND MRFAP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | ESCA | TCGA-L5-A8NI-01A | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000448507 | ENST00000320912 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
5CDS-5UTR | ENST00000448507 | ENST00000507420 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
5CDS-5UTR | ENST00000448507 | ENST00000382581 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
5CDS-5UTR | ENST00000409757 | ENST00000320912 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
5CDS-5UTR | ENST00000409757 | ENST00000507420 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
5CDS-5UTR | ENST00000409757 | ENST00000382581 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000410031 | ENST00000320912 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000410031 | ENST00000507420 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000410031 | ENST00000382581 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000451522 | ENST00000320912 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000451522 | ENST00000507420 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000451522 | ENST00000382581 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000446947 | ENST00000320912 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000446947 | ENST00000507420 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
intron-5UTR | ENST00000446947 | ENST00000382581 | TBC1D14 | chr4 | 6925838 | + | MRFAP1 | chr4 | 6642555 | + |
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FusionProtFeatures for TBC1D14_MRFAP1 |
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Hgene | Tgene |
TBC1D14 | MRFAP1 |
Negative regulator of starvation-induced autophagosomeformation. {ECO:0000269|PubMed:22613832}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for TBC1D14_MRFAP1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for TBC1D14_MRFAP1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
TBC1D14 | UBE3A, XPO1, CENPA, PML, TFEB, TRAPPC11, TRAPPC12, TRAPPC13, ADRBK1, TRAPPC8, TRAPPC4, TRAPPC3, TRAPPC6B, SELENBP1, HEPHL1, TRAPPC2, TRAPPC9, TRAPPC5, LRRC15, TRAPPC2L, TRAPPC10, TRAPPC1, TCHH | MRFAP1 | MORF4L2, MORF4L1, RB1, MRGBP, PAM16, TK1, MAP1LC3B, C8orf33, HTT, SUV39H2, DCDC2, C14orf93, MRFAP1L1, GOLGA8G, C3orf62, GOLGA8F, ZDHHC17, MED4 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TBC1D14_MRFAP1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TBC1D14_MRFAP1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |