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Fusion gene ID: 37317 |
FusionGeneSummary for TBC1D14_EVC |
Fusion gene summary |
Fusion gene information | Fusion gene name: TBC1D14_EVC | Fusion gene ID: 37317 | Hgene | Tgene | Gene symbol | TBC1D14 | EVC | Gene ID | 57533 | 2121 |
Gene name | TBC1 domain family member 14 | EvC ciliary complex subunit 1 | |
Synonyms | - | DWF-1|EVC1|EVCL | |
Cytomap | 4p16.1 | 4p16.2 | |
Type of gene | protein-coding | protein-coding | |
Description | TBC1 domain family member 14 | ellis-van Creveld syndrome proteinEllis van Creveld proteinEllis van Creveld syndrome | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q9P2M4 | P57679 | |
Ensembl transtripts involved in fusion gene | ENST00000448507, ENST00000409757, ENST00000410031, ENST00000451522, ENST00000446947, | ENST00000264956, ENST00000382674, ENST00000509451, ENST00000515113, | |
Fusion gene scores | * DoF score | 7 X 4 X 8=224 | 2 X 3 X 3=18 |
# samples | 9 | 3 | |
** MAII score | log2(9/224*10)=-1.31550182572793 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: TBC1D14 [Title/Abstract] AND EVC [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BRCA | TCGA-EW-A3U0-01A | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
TCGA | RV | SARC | TCGA-DX-AB2O-01A | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000448507 | ENST00000264956 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
Frame-shift | ENST00000448507 | ENST00000382674 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
5CDS-intron | ENST00000448507 | ENST00000509451 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
5CDS-intron | ENST00000448507 | ENST00000515113 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
Frame-shift | ENST00000409757 | ENST00000264956 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
Frame-shift | ENST00000409757 | ENST00000382674 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
5CDS-intron | ENST00000409757 | ENST00000509451 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
5CDS-intron | ENST00000409757 | ENST00000515113 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-3CDS | ENST00000410031 | ENST00000264956 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-3CDS | ENST00000410031 | ENST00000382674 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-intron | ENST00000410031 | ENST00000509451 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-intron | ENST00000410031 | ENST00000515113 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-3CDS | ENST00000451522 | ENST00000264956 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-3CDS | ENST00000451522 | ENST00000382674 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-intron | ENST00000451522 | ENST00000509451 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-intron | ENST00000451522 | ENST00000515113 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-3CDS | ENST00000446947 | ENST00000264956 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-3CDS | ENST00000446947 | ENST00000382674 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-intron | ENST00000446947 | ENST00000509451 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-intron | ENST00000446947 | ENST00000515113 | TBC1D14 | chr4 | 6925838 | + | EVC | chr4 | 5803677 | + |
intron-3CDS | ENST00000448507 | ENST00000264956 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-3CDS | ENST00000448507 | ENST00000382674 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000448507 | ENST00000509451 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000448507 | ENST00000515113 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-3CDS | ENST00000409757 | ENST00000264956 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-3CDS | ENST00000409757 | ENST00000382674 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000409757 | ENST00000509451 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000409757 | ENST00000515113 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-3CDS | ENST00000410031 | ENST00000264956 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-3CDS | ENST00000410031 | ENST00000382674 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000410031 | ENST00000509451 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000410031 | ENST00000515113 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
In-frame | ENST00000451522 | ENST00000264956 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
In-frame | ENST00000451522 | ENST00000382674 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
5CDS-intron | ENST00000451522 | ENST00000509451 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
5CDS-intron | ENST00000451522 | ENST00000515113 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-3CDS | ENST00000446947 | ENST00000264956 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-3CDS | ENST00000446947 | ENST00000382674 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000446947 | ENST00000509451 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
intron-intron | ENST00000446947 | ENST00000515113 | TBC1D14 | chr4 | 6989076 | + | EVC | chr4 | 5785279 | + |
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FusionProtFeatures for TBC1D14_EVC |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
TBC1D14 | EVC |
Negative regulator of starvation-induced autophagosomeformation. {ECO:0000269|PubMed:22613832}. | Component of the EvC complex that positively regulatesciliary Hedgehog (Hh) signaling. Involved in endochondral growthand skeletal development. {ECO:0000250|UniProtKB:P57680}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for TBC1D14_EVC |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_TBC1D14_ENST00000451522_chr4_6989076_+_EVC_ENST00000264956_chr4_5785279_+_473aa MELYFSTVDTFQKFVDALFLQTLPGMTGLPPEECDYLRQEVQENAAWQLGKSNRFRRQQWKLFQELLEQDQQVWMEECALSSVLQTHLRE DHEGTIRGVLGRLGGLTEESTRCVLQGHDLLLRSALRRLALRGNALATLTQMRLSGKKHLLQELREQRALEQGSSQCLDEHQWQLLRALE ARVLEEASRLEEEAQQTRLQLQQRLLAEAQEVGQLLQQHMECAIGQALLVHARNAATKSRAKDRDDFKRTLMEAAVESVYVTSAGVSRLV QAYYQQIGRIMEDHEERKLQHLKTLQGERMENYKLRKKQELSNPSSGSRTAGGAHETSQAVHQRMLSQQKRFLAQFPVHQQMRLHAQQQQ AGVMDLLEAQLETQLQEAEQNFISELAALARVPLAESKLLPAKRGLLEKPLRTKRKKPLPQERGDLGVPNNEDLASGDQTSGSLSSKRLS >In-frame_TBC1D14_ENST00000451522_chr4_6989076_+_EVC_ENST00000382674_chr4_5785279_+_473aa MELYFSTVDTFQKFVDALFLQTLPGMTGLPPEECDYLRQEVQENAAWQLGKSNRFRRQQWKLFQELLEQDQQVWMEECALSSVLQTHLRE DHEGTIRGVLGRLGGLTEESTRCVLQGHDLLLRSALRRLALRGNALATLTQMRLSGKKHLLQELREQRALEQGSSQCLDEHQWQLLRALE ARVLEEASRLEEEAQQTRLQLQQRLLAEAQEVGQLLQQHMECAIGQALLVHARNAATKSRAKDRDDFKRTLMEAAVESVYVTSAGVSRLV QAYYQQIGRIMEDHEERKLQHLKTLQGERMENYKLRKKQELSNPSSGSRTAGGAHETSQAVHQRMLSQQKRFLAQFPVHQQMRLHAQQQQ AGVMDLLEAQLETQLQEAEQNFISELAALARVPLAESKLLPAKRGLLEKPLRTKRKKPLPQERGDLGVPNNEDLASGDQTSGSLSSKRLS |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_TBC1D14_ENST00000451522_chr4_6989076_+_EVC_ENST00000264956_chr4_5785279_+_1419nt ATGGAGCTGTACTTCAGCACCGTGGACACTTTCCAGAAGTTCGTGGATGCCCTGTTCCTTCAGACGCTCCCTGGCATGACTGGCCTCCCC CCGGAAGAGTGTGACTACTTGAGGCAGGAAGTCCAGGAGAACGCTGCCTGGCAGCTGGGGAAGTCAAATCGCTTCCGGAGGCAGCAGTGG AAACTCTTCCAGGAGCTCCTAGAGCAAGACCAGCAGGTGTGGATGGAGGAGTGTGCGCTGTCCAGCGTGCTGCAGACACACCTGCGGGAG GACCACGAGGGCACCATCCGCGGCGTCTTGGGCCGACTGGGCGGCCTCACTGAAGAGTCCACGCGGTGTGTCCTGCAGGGGCATGACCTG CTGTTGCGCTCAGCCCTCCGGAGGCTGGCACTCCGCGGCAACGCCCTGGCCACCCTGACGCAGATGCGGCTATCGGGGAAGAAGCACCTC CTGCAGGAGCTGCGGGAACAGCGTGCACTGGAGCAGGGGTCCTCCCAGTGCCTGGACGAGCATCAGTGGCAGCTGCTCAGGGCCCTGGAG GCGCGTGTGCTGGAGGAGGCCAGCCGGCTAGAGGAGGAAGCACAGCAGACACGGCTGCAGCTCCAGCAGCGGCTCCTGGCCGAGGCCCAG GAGGTGGGGCAGCTTCTGCAGCAGCACATGGAGTGCGCCATTGGGCAGGCGCTGCTGGTGCATGCACGGAATGCAGCCACCAAGAGCCGG GCCAAGGACAGGGATGACTTCAAGAGGACACTGATGGAGGCGGCAGTGGAGAGCGTCTACGTGACCAGCGCTGGTGTCAGCCGCCTGGTG CAGGCGTATTACCAGCAAATCGGAAGGATCATGGAGGACCACGAGGAGAGAAAACTGCAGCACCTGAAGACCCTGCAGGGTGAGAGGATG GAAAATTACAAACTGCGGAAAAAGCAAGAACTCAGCAACCCTTCGTCGGGCAGCAGGACGGCAGGTGGCGCTCATGAGACCTCCCAGGCG GTCCACCAGAGGATGCTGTCCCAGCAGAAGAGGTTCCTGGCCCAGTTCCCAGTGCACCAGCAGATGCGTCTGCACGCCCAGCAGCAGCAG GCAGGAGTCATGGACCTTCTGGAAGCCCAGCTGGAGACCCAGCTACAGGAAGCTGAACAGAACTTCATCTCCGAGCTGGCAGCCTTGGCC CGAGTGCCCCTTGCTGAAAGCAAACTGTTGCCTGCTAAGCGTGGGCTGCTAGAGAAGCCCCTAAGGACTAAAAGGAAGAAGCCCCTGCCC CAGGAAAGAGGGGACCTGGGGGTGCCCAACAATGAGGACCTTGCCTCCGGGGACCAGACCTCAGGCTCACTCAGCAGCAAAAGGCTGAGT >In-frame_TBC1D14_ENST00000451522_chr4_6989076_+_EVC_ENST00000382674_chr4_5785279_+_1419nt ATGGAGCTGTACTTCAGCACCGTGGACACTTTCCAGAAGTTCGTGGATGCCCTGTTCCTTCAGACGCTCCCTGGCATGACTGGCCTCCCC CCGGAAGAGTGTGACTACTTGAGGCAGGAAGTCCAGGAGAACGCTGCCTGGCAGCTGGGGAAGTCAAATCGCTTCCGGAGGCAGCAGTGG AAACTCTTCCAGGAGCTCCTAGAGCAAGACCAGCAGGTGTGGATGGAGGAGTGTGCGCTGTCCAGCGTGCTGCAGACACACCTGCGGGAG GACCACGAGGGCACCATCCGCGGCGTCTTGGGCCGACTGGGCGGCCTCACTGAAGAGTCCACGCGGTGTGTCCTGCAGGGGCATGACCTG CTGTTGCGCTCAGCCCTCCGGAGGCTGGCACTCCGCGGCAACGCCCTGGCCACCCTGACGCAGATGCGGCTATCGGGGAAGAAGCACCTC CTGCAGGAGCTGCGGGAACAGCGTGCACTGGAGCAGGGGTCCTCCCAGTGCCTGGACGAGCATCAGTGGCAGCTGCTCAGGGCCCTGGAG GCGCGTGTGCTGGAGGAGGCCAGCCGGCTAGAGGAGGAAGCACAGCAGACACGGCTGCAGCTCCAGCAGCGGCTCCTGGCCGAGGCCCAG GAGGTGGGGCAGCTTCTGCAGCAGCACATGGAGTGCGCCATTGGGCAGGCGCTGCTGGTGCATGCACGGAATGCAGCCACCAAGAGCCGG GCCAAGGACAGGGATGACTTCAAGAGGACACTGATGGAGGCGGCAGTGGAGAGCGTCTACGTGACCAGCGCTGGTGTCAGCCGCCTGGTG CAGGCGTATTACCAGCAAATCGGAAGGATCATGGAGGACCACGAGGAGAGAAAACTGCAGCACCTGAAGACCCTGCAGGGTGAGAGGATG GAAAATTACAAACTGCGGAAAAAGCAAGAACTCAGCAACCCTTCGTCGGGCAGCAGGACGGCAGGTGGCGCTCATGAGACCTCCCAGGCG GTCCACCAGAGGATGCTGTCCCAGCAGAAGAGGTTCCTGGCCCAGTTCCCAGTGCACCAGCAGATGCGTCTGCACGCCCAGCAGCAGCAG GCAGGAGTCATGGACCTTCTGGAAGCCCAGCTGGAGACCCAGCTACAGGAAGCTGAACAGAACTTCATCTCCGAGCTGGCAGCCTTGGCC CGAGTGCCCCTTGCTGAAAGCAAACTGTTGCCTGCTAAGCGTGGGCTGCTAGAGAAGCCCCTAAGGACTAAAAGGAAGAAGCCCCTGCCC CAGGAAAGAGGGGACCTGGGGGTGCCCAACAATGAGGACCTTGCCTCCGGGGACCAGACCTCAGGCTCACTCAGCAGCAAAAGGCTGAGT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_TBC1D14_ENST00000451522_chr4_6989076_+_EVC_ENST00000264956_chr4_5785279_+_4872nt CAGCGCGGATCGCCTCGCTGTGTCTGCGCGCGATTGAGCGGCCTGCCGCCCCGCCCCGCCCCGCGAGTCTGAGGAGCCGCCGCGTCCGCC CGCCCGCCCGCGGTCCGGGAGGGAGGGAGGGAGGCCGGCCCTCCGCTCGCTGGGCATGGAGCCTCCGGCCGCGCGCCTCTAAGGCCCCGG CGTTCATGGAGCTGTACTTCAGCACCGTGGACACTTTCCAGAAGTTCGTGGATGCCCTGTTCCTTCAGACGCTCCCTGGCATGACTGGCC TCCCCCCGGAAGAGTGTGACTACTTGAGGCAGGAAGTCCAGGAGAACGCTGCCTGGCAGCTGGGGAAGTCAAATCGCTTCCGGAGGCAGC AGTGGAAACTCTTCCAGGAGCTCCTAGAGCAAGACCAGCAGGTGTGGATGGAGGAGTGTGCGCTGTCCAGCGTGCTGCAGACACACCTGC GGGAGGACCACGAGGGCACCATCCGCGGCGTCTTGGGCCGACTGGGCGGCCTCACTGAAGAGTCCACGCGGTGTGTCCTGCAGGGGCATG ACCTGCTGTTGCGCTCAGCCCTCCGGAGGCTGGCACTCCGCGGCAACGCCCTGGCCACCCTGACGCAGATGCGGCTATCGGGGAAGAAGC ACCTCCTGCAGGAGCTGCGGGAACAGCGTGCACTGGAGCAGGGGTCCTCCCAGTGCCTGGACGAGCATCAGTGGCAGCTGCTCAGGGCCC TGGAGGCGCGTGTGCTGGAGGAGGCCAGCCGGCTAGAGGAGGAAGCACAGCAGACACGGCTGCAGCTCCAGCAGCGGCTCCTGGCCGAGG CCCAGGAGGTGGGGCAGCTTCTGCAGCAGCACATGGAGTGCGCCATTGGGCAGGCGCTGCTGGTGCATGCACGGAATGCAGCCACCAAGA GCCGGGCCAAGGACAGGGATGACTTCAAGAGGACACTGATGGAGGCGGCAGTGGAGAGCGTCTACGTGACCAGCGCTGGTGTCAGCCGCC TGGTGCAGGCGTATTACCAGCAAATCGGAAGGATCATGGAGGACCACGAGGAGAGAAAACTGCAGCACCTGAAGACCCTGCAGGGTGAGA GGATGGAAAATTACAAACTGCGGAAAAAGCAAGAACTCAGCAACCCTTCGTCGGGCAGCAGGACGGCAGGTGGCGCTCATGAGACCTCCC AGGCGGTCCACCAGAGGATGCTGTCCCAGCAGAAGAGGTTCCTGGCCCAGTTCCCAGTGCACCAGCAGATGCGTCTGCACGCCCAGCAGC AGCAGGCAGGAGTCATGGACCTTCTGGAAGCCCAGCTGGAGACCCAGCTACAGGAAGCTGAACAGAACTTCATCTCCGAGCTGGCAGCCT TGGCCCGAGTGCCCCTTGCTGAAAGCAAACTGTTGCCTGCTAAGCGTGGGCTGCTAGAGAAGCCCCTAAGGACTAAAAGGAAGAAGCCCC TGCCCCAGGAAAGAGGGGACCTGGGGGTGCCCAACAATGAGGACCTTGCCTCCGGGGACCAGACCTCAGGCTCACTCAGCAGCAAAAGGC TGAGTCAGCAAGAAAGTGAAGCTGGGGACAGTGGGAACTCAAAGAAGATGCTAAAGAGAAGAAGCAACTTGTAGTTTAAGACCAGTCGGT GGGACAAGACCTGAAGCCCTGGGTCTGGGTGTGAATTCCACCTTCCCTCCTGCAGTGCTGAGAGGCAGCGAGGACGGAGAGGACAGCGGC ATCTCTAGGCTCTTCTGAGAGGGACAGAGAAAGAATAGAAATGTGCCCTAAAAGCATAAATGAGTATCACCTGAGAAAATTAGGCATTCC CGTCTTGGAAACACGTCTCTGTGAGTTTGCATTTCATTTGGCTTGGAGCCCTGGCTCGATGCCTCATGGATCTTTCTCCCCAAGGAGGGA CGTCTTGAGGGGTCCGAGCCTCAGGCCAAGGACCCCTGATGCAGACTCTGGAATCCCTGGCCCAAAGGCCTGTCTGGGCCCATCTGGGGC TGAGGACACACAGATACATAATGACACCTGCAGAAATGTATTCTCTGAGGACACTTAGAATATGAGGAAGAGGGTGTGGCCCAACCCTCA CTTCACCTGGGGAGGGGCTTCTTCCGGACAGTAGACACCCTGCCCGTGCAGAGAGATGTCATGGGGGCACCTGCTCTCCCTGATAGATGC TGAGAGCATCCAGAAACTTCCAGACCAGCCCTCTCACCACACCCAGAAGAGGCCTTTCCCATCTGGAGAGAAGCTTCCAGACCAGCCCTT CACACACCACAGCCAGGAGGGGCCTTTCCCACCTGGAGAGAAACTTCCAGACCAGCCCCTCATACCACAGCCAAGAGGGGCCTTTCTCAC CTGGAGAGAAATTTCCAGACCATCCCCTCTCACCACAGCCAGGAGAGGCCTTTCCCACCGGTAGAGAAACTTCCAGACCAGCCCCTCACA CCACAGCCAAGAGAAGCCTTTCCAGCCTGGAGAGAAACTTCCAGACCAGCCCTCTCACTACAGCCAGGAGAGGCCTTTCCCGCCTGGAAA CTTCCGGACAAGCCTCTCACACACCACAGCCAGGAGAGGCCTTTCCCACCTGGACAGAAACTTCCAGACCAGCCCCTCTCACCACAGCCA GGAGAGGCCTTTACCACCTGGAGAGAAGCTTCCAGACCAGCCCCTCACACCACAGCCAGGAGAGGCCTTTCCCACCTGGAGAGAAACTTC CAGACCAGCCCCTCATACCACAGCCAAGAGGGGCCTTTCTCACCTGGAGAGAAACTTCCAGACCAGCCCCTCACACCACCGCCAGGAGAG GCCTTTCCCACCGGGAGAGAAACTTCCAGACCAGCCCCTCACACCACAGCCAGGAGAGGCCTTTCCCACCGGGAGAGAAACTTCCAGACC AGCCCTCTCACTACAGCCAGAAGAGGCCTTTCCCACCGGGAGAGGAACTTCCAGACCAGCCCCTCACACCACAGCCAGGAGAGGCCTTTC CCGCCTGGAGAGAAGCTTCAGGCCAGCTCCTCACACCACAGCCAGGAGAGACCTTTTCTGCCTGGAGAGAAACTTTCAGACCAGCCCCAC ACACCACAGCCAGGAGAGGCCGTTCCTGCCTGGAGAGAAGCTTCCAGACCAGCCCTTCACACCACAGCCAGGAGAGGCCTTTCCCACCTG GAGAGAAACTTCCAGACCAGCCCCTCTCACCACAGCCAGGAGAGGCCGTTCCCACCTGGAGGGAAAATTGCTCCTTTGATGGAGGTTAGG GACTGTCACCCTCAGCACTGTGAACATACCGGGCGAGATCATTCTTCAGGGGAAGGAGCTGCCCAGAGCATCACAGGATGTTCCAGTGTC CCTGGTCTCTGCCCACCAGATGCCAGCACTCCCACCATTCGTGGCAACCAAGGATGTCTCCAGACACTGCCCCGTGTCCATGGGGTTATC ACCCACTGTGCTGAGTCAAAGGGTGCCTTGCCCTGGTCTAATCCAGGACATAGCCGTGGATACGTCCAAAAATCCCCAGAACCTAGTGAG CCCTCTGGCTCTGGGAGCCCCTATCTCAGGAATTTTCAGGGTCATTTGTGACTTTTCATTTCTTAAAACCTGAAATAGACTCTCTTAGAA ACAAGTGACTCCTTCCCAGTGGCCAAAACTTAATCATCAGAGCGCTTCCTTCAGTTCCTCACCCATCAGCCAGTGGGCTCTCCAAAGTTA ACCAACAGCTCCCTCTTGTGGTTCACTAAAAAACTTGGTTATTCCATGGAGTTGTGCAAAGCTATGGCTTCCTTGGTGCAATATTCTTAA AACCTGCTTTGCATAGAAATCACTTTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCATGGCAATCTCCATCTCCCGGGTTCAAG CGATTTTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGACGTGTGCCACCACGCCTGGCTAAATCTTTTTTGTATTTTATTTTAGTA GAGACGGGGTTTCACCATACTGGCCAGGCTGCTCTCGAACTCCTGACCTCATCGTCCACCTGCCTCGGCCTCCCCAAAGTGCTGAGATTA GGCGTTAGCCACCGCGCCCGGCCAGAAATCACTTTTATATTGTCACATGGGCCCTCTGCACAGAGTCCGATGGCTCCTCCCGGGGAAGCC TGATTTTGTGACGTGTGTATAGTAAATGCAGGCCCTCTGGCAGCACCATAATTGGTCGGTTACCCTGAGCCCAGAGCTCTGAAAGCATCT GTGGAATGATCACGGGACCCTTCTCCTCTGAGAAGGCTCCCGGCTGCCTCCCCGCCACCGAGCTTGTAGCCTGAATGCCTGGCTGTCGCA TGGAGCATTTTGCTTCTGGGGTGTCTTCCTTAGCCAAAGGGAACGTGTCATTTGCTCGACCCTGGCCCACCCTTGCCGCCCAGCTGTTGT GCTGGGCACAGTCTGGGGCACAGGCCTCCATGATGAAGACGCGTGGGCTGTCGGTGCTTTCATCCGTCACAAACTGGCACCTGTACCTGC CAGCAGGAGCATGATGGGGACTTCCATGCTGGAATTGCTCCCTGATTAAAATGAGATATGGCTATTTGGAAGACACTGCATTTTAGCCAG TGTACCTGGGCACAGACTCGGGGCTGCCCTGAAGCTGATGAAGGCTTGAAGGACGGAAGGGCTGAGCCACATGAAGGCAGCACTCAGGGC CAGGGGAGAGAGAAGAGGATCAGCAGTGCAGCCCCAGGATGCCTCGCAGGTACCCTGCCTCCATTTTGGTTACCATCCCCACTTATTATG GGCTGTGGGCTGTTATGGTGATGGATGGATGTGGATTTGGAAGGGGACCATGAGAGATGATGTATTATGATGAACTCATGATTTAATTCT >In-frame_TBC1D14_ENST00000451522_chr4_6989076_+_EVC_ENST00000382674_chr4_5785279_+_5504nt CAGCGCGGATCGCCTCGCTGTGTCTGCGCGCGATTGAGCGGCCTGCCGCCCCGCCCCGCCCCGCGAGTCTGAGGAGCCGCCGCGTCCGCC CGCCCGCCCGCGGTCCGGGAGGGAGGGAGGGAGGCCGGCCCTCCGCTCGCTGGGCATGGAGCCTCCGGCCGCGCGCCTCTAAGGCCCCGG CGTTCATGGAGCTGTACTTCAGCACCGTGGACACTTTCCAGAAGTTCGTGGATGCCCTGTTCCTTCAGACGCTCCCTGGCATGACTGGCC TCCCCCCGGAAGAGTGTGACTACTTGAGGCAGGAAGTCCAGGAGAACGCTGCCTGGCAGCTGGGGAAGTCAAATCGCTTCCGGAGGCAGC AGTGGAAACTCTTCCAGGAGCTCCTAGAGCAAGACCAGCAGGTGTGGATGGAGGAGTGTGCGCTGTCCAGCGTGCTGCAGACACACCTGC GGGAGGACCACGAGGGCACCATCCGCGGCGTCTTGGGCCGACTGGGCGGCCTCACTGAAGAGTCCACGCGGTGTGTCCTGCAGGGGCATG ACCTGCTGTTGCGCTCAGCCCTCCGGAGGCTGGCACTCCGCGGCAACGCCCTGGCCACCCTGACGCAGATGCGGCTATCGGGGAAGAAGC ACCTCCTGCAGGAGCTGCGGGAACAGCGTGCACTGGAGCAGGGGTCCTCCCAGTGCCTGGACGAGCATCAGTGGCAGCTGCTCAGGGCCC TGGAGGCGCGTGTGCTGGAGGAGGCCAGCCGGCTAGAGGAGGAAGCACAGCAGACACGGCTGCAGCTCCAGCAGCGGCTCCTGGCCGAGG CCCAGGAGGTGGGGCAGCTTCTGCAGCAGCACATGGAGTGCGCCATTGGGCAGGCGCTGCTGGTGCATGCACGGAATGCAGCCACCAAGA GCCGGGCCAAGGACAGGGATGACTTCAAGAGGACACTGATGGAGGCGGCAGTGGAGAGCGTCTACGTGACCAGCGCTGGTGTCAGCCGCC TGGTGCAGGCGTATTACCAGCAAATCGGAAGGATCATGGAGGACCACGAGGAGAGAAAACTGCAGCACCTGAAGACCCTGCAGGGTGAGA GGATGGAAAATTACAAACTGCGGAAAAAGCAAGAACTCAGCAACCCTTCGTCGGGCAGCAGGACGGCAGGTGGCGCTCATGAGACCTCCC AGGCGGTCCACCAGAGGATGCTGTCCCAGCAGAAGAGGTTCCTGGCCCAGTTCCCAGTGCACCAGCAGATGCGTCTGCACGCCCAGCAGC AGCAGGCAGGAGTCATGGACCTTCTGGAAGCCCAGCTGGAGACCCAGCTACAGGAAGCTGAACAGAACTTCATCTCCGAGCTGGCAGCCT TGGCCCGAGTGCCCCTTGCTGAAAGCAAACTGTTGCCTGCTAAGCGTGGGCTGCTAGAGAAGCCCCTAAGGACTAAAAGGAAGAAGCCCC TGCCCCAGGAAAGAGGGGACCTGGGGGTGCCCAACAATGAGGACCTTGCCTCCGGGGACCAGACCTCAGGCTCACTCAGCAGCAAAAGGC TGAGTCAGCAAGAAAGTGAAGCTGGGGACAGTGGGAACTCAAAGAAGATGCTAAAGAGAAGAAGCAACTTGTAGTTTAAGACCAGTCGGT GGGACAAGACCTGAAGCCCTGGGTCTGGGTGTGAATTCCACCTTCCCTCCTGCAGTGCTGAGAGGCAGCGAGGACGGAGAGGACAGCGGC ATCTCTAGGCTCTTCTGAGAGGGACAGAGAAAGAATAGAAATGTGCCCTAAAAGCATAAATGAGTATCACCTGAGAAAATTAGGCATTCC CGTCTTGGAAACACGTCTCTGTGAGTTTGCATTTCATTTGGCTTGGAGCCCTGGCTCGATGCCTCATGGATCTTTCTCCCCAAGGAGGGA CGTCTTGAGGGGTCCGAGCCTCAGGCCAAGGACCCCTGATGCAGACTCTGGAATCCCTGGCCCAAAGGCCTGTCTGGGCCCATCTGGGGC TGAGGACACACAGATACATAATGACACCTGCAGAAATGTATTCTCTGAGGACACTTAGAATATGAGGAAGAGGGTGTGGCCCAACCCTCA CTTCACCTGGGGAGGGGCTTCTTCCGGACAGTAGACACCCTGCCCGTGCAGAGAGATGTCATGGGGGCACCTGCTCTCCCTGATAGATGC TGAGAGCATCCAGAAACTTCCAGACCAGCCCTCTCACCACACCCAGAAGAGGCCTTTCCCATCTGGAGAGAAGCTTCCAGACCAGCCCTT CACACACCACAGCCAGGAGGGGCCTTTCCCACCTGGAGAGAAACTTCCAGACCAGCCCCTCATACCACAGCCAAGAGGGGCCTTTCTCAC CTGGAGAGAAATTTCCAGACCATCCCCTCTCACCACAGCCAGGAGAGGCCTTTCCCACCGGTAGAGAAACTTCCAGACCAGCCCCTCACA CCACAGCCAAGAGAAGCCTTTCCAGCCTGGAGAGAAACTTCCAGACCAGCCCTCTCACTACAGCCAGGAGAGGCCTTTCCCGCCTGGAAA CTTCCGGACAAGCCTCTCACACACCACAGCCAGGAGAGGCCTTTCCCACCTGGACAGAAACTTCCAGACCAGCCCCTCTCACCACAGCCA GGAGAGGCCTTTACCACCTGGAGAGAAGCTTCCAGACCAGCCCCTCACACCACAGCCAGGAGAGGCCTTTCCCACCTGGAGAGAAACTTC CAGACCAGCCCCTCATACCACAGCCAAGAGGGGCCTTTCTCACCTGGAGAGAAACTTCCAGACCAGCCCCTCACACCACCGCCAGGAGAG GCCTTTCCCACCGGGAGAGAAACTTCCAGACCAGCCCCTCACACCACAGCCAGGAGAGGCCTTTCCCACCGGGAGAGAAACTTCCAGACC AGCCCTCTCACTACAGCCAGAAGAGGCCTTTCCCACCGGGAGAGGAACTTCCAGACCAGCCCCTCACACCACAGCCAGGAGAGGCCTTTC CCGCCTGGAGAGAAGCTTCAGGCCAGCTCCTCACACCACAGCCAGGAGAGACCTTTTCTGCCTGGAGAGAAACTTTCAGACCAGCCCCAC ACACCACAGCCAGGAGAGGCCGTTCCTGCCTGGAGAGAAGCTTCCAGACCAGCCCTTCACACCACAGCCAGGAGAGGCCTTTCCCACCTG GAGAGAAACTTCCAGACCAGCCCCTCTCACCACAGCCAGGAGAGGCCGTTCCCACCTGGAGGGAAAATTGCTCCTTTGATGGAGGTTAGG GACTGTCACCCTCAGCACTGTGAACATACCGGGCGAGATCATTCTTCAGGGGAAGGAGCTGCCCAGAGCATCACAGGATGTTCCAGTGTC CCTGGTCTCTGCCCACCAGATGCCAGCACTCCCACCATTCGTGGCAACCAAGGATGTCTCCAGACACTGCCCCGTGTCCATGGGGTTATC ACCCACTGTGCTGAGTCAAAGGGTGCCTTGCCCTGGTCTAATCCAGGACATAGCCGTGGATACGTCCAAAAATCCCCAGAACCTAGTGAG CCCTCTGGCTCTGGGAGCCCCTATCTCAGGAATTTTCAGGGTCATTTGTGACTTTTCATTTCTTAAAACCTGAAATAGACTCTCTTAGAA ACAAGTGACTCCTTCCCAGTGGCCAAAACTTAATCATCAGAGCGCTTCCTTCAGTTCCTCACCCATCAGCCAGTGGGCTCTCCAAAGTTA ACCAACAGCTCCCTCTTGTGGTTCACTAAAAAACTTGGTTATTCCATGGAGTTGTGCAAAGCTATGGCTTCCTTGGTGCAATATTCTTAA AACCTGCTTTGCATAGAAATCACTTTTGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCATGGCAATCTCCATCTCCCGGGTTCAAG CGATTTTCCTGCCTCAGCCTCCCCAGTAGCTGGGACTACAGACGTGTGCCACCACGCCTGGCTAAATCTTTTTTGTATTTTATTTTAGTA GAGACGGGGTTTCACCATACTGGCCAGGCTGCTCTCGAACTCCTGACCTCATCGTCCACCTGCCTCGGCCTCCCCAAAGTGCTGAGATTA GGCGTTAGCCACCGCGCCCGGCCAGAAATCACTTTTATATTGTCACATGGGCCCTCTGCACAGAGTCCGATGGCTCCTCCCGGGGAAGCC TGATTTTGTGACGTGTGTATAGTAAATGCAGGCCCTCTGGCAGCACCATAATTGGTCGGTTACCCTGAGCCCAGAGCTCTGAAAGCATCT GTGGAATGATCACGGGACCCTTCTCCTCTGAGAAGGCTCCCGGCTGCCTCCCCGCCACCGAGCTTGTAGCCTGAATGCCTGGCTGTCGCA TGGAGCATTTTGCTTCTGGGGTGTCTTCCTTAGCCAAAGGGAACGTGTCATTTGCTCGACCCTGGCCCACCCTTGCCGCCCAGCTGTTGT GCTGGGCACAGTCTGGGGCACAGGCCTCCATGATGAAGACGCGTGGGCTGTCGGTGCTTTCATCCGTCACAAACTGGCACCTGTACCTGC CAGCAGGAGCATGATGGGGACTTCCATGCTGGAATTGCTCCCTGATTAAAATGAGATATGGCTATTTGGAAGACACTGCATTTTAGCCAG TGTACCTGGGCACAGACTCGGGGCTGCCCTGAAGCTGATGAAGGCTTGAAGGACGGAAGGGCTGAGCCACATGAAGGCAGCACTCAGGGC CAGGGGAGAGAGAAGAGGATCAGCAGTGCAGCCCCAGGATGCCTCGCAGACGTGCCTTCTGCCATGATTGTGAAGTTCTAGCCACGTGGA ACTCTCTCGGAAGAACTGGTTGTTAAAGAGCACCTCTGCCTTCTTCCTCTGTTGCCATGTGATCTCTGCACACGCTAGCTCTCCTTCGCC TTCTGCCATGCTGGAAGTAGCCTGAGGCCCTCACCAGAAGCAGACGCTGGCACCGTGCTGCTTGTACAGCCTGCAGAGCCGTGAGCCAAG TAAACCTCTTTAATTACCCAGCCTCAGGTGCTCCGGGAACGCCTTCCGCGGAATGAAGCGGCCCATGCCCTTGTTGACGTTGATGTTTCC GTCTTCAAAGACGATCTTGCCCTGGCTGATGACCACTAGTGGGGAGCCGTGGCACTCCATACCCTCGAAGATGTTGTACTCCACCGCCTG CACCAACAGCCTCAGTGTTACTTCCCAGGATTTGCTCTGCCCCAAACGAGCTGTTCATAACAGCGATTTTGCCTAACATTATATCATAAG CGTGTTCCAATGTTTTTTTTTCTCTCTAAAAATACCTTTTATTGACTGTAATATTCCACTGTATGGTCCACAGTGTATATAACCAACAAC TCACCGTTGCGCATGTAGGCTGCCGGTGGCTTTCTATAATCAAATCAATATTGTTCTGGGGCATCACAAAGAGGAAGGGGGTCCCCCGGG GTTATGCAATGTGGCTGCTTTGACTGTACTGGACATAAAAATAAGTAAAATGTTCTTCATTTTACTTAAAATGTGTCTTTAAATAAAATT |
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FusionGenePPI for TBC1D14_EVC |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
TBC1D14 | UBE3A, XPO1, CENPA, PML, TFEB, TRAPPC11, TRAPPC12, TRAPPC13, ADRBK1, TRAPPC8, TRAPPC4, TRAPPC3, TRAPPC6B, SELENBP1, HEPHL1, TRAPPC2, TRAPPC9, TRAPPC5, LRRC15, TRAPPC2L, TRAPPC10, TRAPPC1, TCHH | EVC | SHMT2, NXF1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TBC1D14_EVC |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TBC1D14_EVC |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | EVC | C0013903 | Ellis-Van Creveld Syndrome | 3 | CTD_human;ORPHANET;UNIPROT |
Tgene | EVC | C0457013 | Weyers acrofacial dysostosis | 1 | CTD_human;ORPHANET;UNIPROT |