	FusionGeneSummary
	FusionProtFeature
	FusionGeneSequence
	FusionGenePPI
	RelatedDrugs
	RelatedDiseases

Fusion gene ID: 37242

FusionGeneSummary for TAP2_VARS

Fusion gene summary

Fusion gene information	Fusion gene name: TAP2_VARS
	Fusion gene ID: 37242
		Hgene	Tgene
	Gene symbol	TAP2	VARS
	Gene ID	266629	7407
	Gene name	SEC14 like lipid binding 3	valyl-tRNA synthetase
	Synonyms	TAP2	G7A\|NDMSCA\|VARS1\|VARS2
	Cytomap	22q12.2	6p21.33
	Type of gene	protein-coding	protein-coding
	Description	SEC14-like protein 3SEC14-like 3SEC14p-like protein TAP2tocopherol-associated protein 2	valine--tRNA ligaseprotein G7avalRSvaline tRNA ligase 1, cytoplasmicvalyl-tRNA synthetase 2
	Modification date	20180519	20180523
	UniProtAcc	Q03519	P26640
	Ensembl transtripts involved in fusion gene	ENST00000452392, ENST00000374899, ENST00000374897, ENST00000485701, ENST00000439425, ENST00000455842, ENST00000490587, ENST00000414145, ENST00000443713, ENST00000463174, ENST00000451907, ENST00000452371, ENST00000468636, ENST00000445986, ENST00000419142, ENST00000460458, ENST00000383240, ENST00000383239, ENST00000469427, ENST00000383119, ENST00000383118, ENST00000474736, ENST00000426977, ENST00000457634, ENST00000490573,	ENST00000375663, ENST00000482996, ENST00000444930, ENST00000435657, ENST00000487524, ENST00000457796, ENST00000469542, ENST00000211402, ENST00000462946, ENST00000422694, ENST00000491232, ENST00000424974, ENST00000425144, ENST00000474299,
Fusion gene scores	* DoF score	2 X 2 X 2=8	5 X 4 X 5=100
	# samples	2	5
	** MAII score	log2(2/8*10)=1.32192809488736	log2(5/100*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: TAP2 [Title/Abstract] AND VARS [Title/Abstract] AND fusion [Title/Abstract]
Functional or gene categories assigned by FusionGDB annotation

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Data type	Source	Cancer type	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
TCGA	RV	LGG	TCGA-FG-5963-01A	TAP2	chr6	32797177	-	VARS	chr6	31760897	-

* LD: Li Ding group's fusion gene list
RV: Roel Verhaak group's fusion gene list
ChiTaRs fusion database

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
Frame-shift	ENST00000452392	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000452392	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
Frame-shift	ENST00000374899	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374899	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
Frame-shift	ENST00000374897	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
5CDS-intron	ENST00000374897	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000485701	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000485701	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000439425	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000439425	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000455842	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000455842	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000490587	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490587	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000414145	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000414145	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000443713	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000443713	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000463174	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000463174	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000451907	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000451907	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000452371	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000452371	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000468636	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000468636	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000445986	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000445986	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000419142	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000419142	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000460458	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000460458	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000383240	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383240	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000383239	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383239	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000469427	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000469427	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000383119	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383119	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000383118	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000383118	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000474736	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000474736	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000426977	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000426977	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000457634	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000457634	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-3CDS	ENST00000490573	ENST00000375663	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000482996	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000444930	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000435657	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000487524	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000457796	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000469542	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000211402	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000462946	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000422694	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000491232	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000424974	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000425144	TAP2	chr6	32797177	-	VARS	chr6	31760897	-
intron-intron	ENST00000490573	ENST00000474299	TAP2	chr6	32797177	-	VARS	chr6	31760897	-

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FusionProtFeatures for TAP2_VARS

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
TAP2 Q03519	VARS P26640
Involved in the transport of antigens from the cytoplasmto the endoplasmic reticulum for association with MHC class Imolecules. Also acts as a molecular scaffold for the final stageof MHC class I folding, namely the binding of peptide. Nascent MHCclass I molecules associate with TAP via tapasin. Inhibited by thecovalent attachment of herpes simplex virus ICP47 protein, whichblocks the peptide-binding site of TAP. Inhibited by humancytomegalovirus US6 glycoprotein, which binds to the lumenal sideof the TAP complex and inhibits peptide translocation byspecifically blocking ATP-binding to TAP1 and prevents theconformational rearrangement of TAP induced by peptide binding.Inhibited by human adenovirus E3-19K glycoprotein, which binds theTAP complex and acts as a tapasin inhibitor, preventing MHC classI/TAP association.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page
.

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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FusionGeneSequence for TAP2_VARS

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for TAP2_VARS

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page
.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene	Hgene's interactors	Tgene	Tgene's interactors
TAP2	HLA-G, TAP1, TAPBP, HLA-C, PSMB8, APP, B2M, HLA-A, HLA-E, FMNL1, PSMG3, RBM18, TCTN2, TCTN3, FGD1, CKAP5, ZNF281, ATL3, MASTL, TMCO3, SLC17A2, SCNN1D, HTR3A	VARS	EEF1A2, HLA-B, TRAF6, EPB41, TFE3, EEF1A1, EEF1G, EEF1D, EEF1B2, OTUD5, DMWD, ATG101, CACNA1A, CHD7, CUL3, CDK2, SHC1, CAD, LARS, FN1, VCAM1, ITGA4, MAPK11, YWHAQ, FBXO6, AIMP1, CCT3, KNTC1, CCT4, QARS, STAU1, SART3, CALCOCO2, CCDC8, EED, EGFR, FOSL2, FOS, CORO1A, FAM98B, TP53RK, AHNAK, CYB5B, EFHD2, GBF1, LAP3, MARS, MCFD2, PAFAH1B2, PAFAH1B3, PTPN2, PTPN6, SNW1, TMOD2, NTRK1, POC5, HSP90AA1, PKN2, TMPO, PDLIM7, JUN, TCF4, FOXA1, FOXB1, FOXC1, FOXE1, FOXG1, FOXH1, FOXI1, FOXI2, FOXL1, FOXL2, FOXN1, FOXQ1, RC3H1, DERL1, MLLT6, ABTB1, MTNR1A, CYLD, BRCA1

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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RelatedDrugs for TAP2_VARS

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TAP2_VARS

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner	Gene	Disease ID	Disease name	# pubmeds	Source
Hgene	TAP2	C0036341	Schizophrenia	2	PSYGENET
Hgene	TAP2	C0005586	Bipolar Disorder	1	PSYGENET
Hgene	TAP2	C0023893	Liver Cirrhosis, Experimental	1	CTD_human

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Fusion gene ID: 37242

FusionGeneSummary for TAP2_VARS

FusionProtFeatures for TAP2_VARS

FusionGeneSequence for TAP2_VARS

FusionGenePPI for TAP2_VARS

RelatedDrugs for TAP2_VARS

RelatedDiseases for TAP2_VARS