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Fusion gene ID: 3701 |
FusionGeneSummary for B3GALNT2_LYST |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: B3GALNT2_LYST | Fusion gene ID: 3701 | Hgene | Tgene | Gene symbol | B3GALNT2 | LYST | Gene ID | 148789 | 1130 |
| Gene name | beta-1,3-N-acetylgalactosaminyltransferase 2 | lysosomal trafficking regulator | |
| Synonyms | B3GalNAc-T2|MDDGA11 | CHS|CHS1 | |
| Cytomap | 1q42.3 | 1q42.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2UDP-GalNAc:betaGlcNAc beta-1,3-galactosaminyltransferase, polypeptide 2beta-1,3-GalNAc-T2 | lysosomal-trafficking regulatorChediak-Higashi syndrome 1beige homolog | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | Q8NCR0 | Q99698 | |
| Ensembl transtripts involved in fusion gene | ENST00000366600, ENST00000313984, ENST00000494378, | ENST00000389794, ENST00000389793, ENST00000536965, ENST00000473037, | |
| Fusion gene scores | * DoF score | 3 X 3 X 3=27 | 6 X 6 X 5=180 |
| # samples | 3 | 7 | |
| ** MAII score | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(7/180*10)=-1.36257007938471 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: B3GALNT2 [Title/Abstract] AND LYST [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | B3GALNT2 | GO:0006493 | protein O-linked glycosylation | 23929950 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | BLCA | TCGA-G2-AA3B-01A | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000366600 | ENST00000389794 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| In-frame | ENST00000366600 | ENST00000389793 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5CDS-intron | ENST00000366600 | ENST00000536965 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5CDS-5UTR | ENST00000366600 | ENST00000473037 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| In-frame | ENST00000313984 | ENST00000389794 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| In-frame | ENST00000313984 | ENST00000389793 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5CDS-intron | ENST00000313984 | ENST00000536965 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5CDS-5UTR | ENST00000313984 | ENST00000473037 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5UTR-3CDS | ENST00000494378 | ENST00000389794 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5UTR-3CDS | ENST00000494378 | ENST00000389793 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5UTR-intron | ENST00000494378 | ENST00000536965 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
| 5UTR-5UTR | ENST00000494378 | ENST00000473037 | B3GALNT2 | chr1 | 235647638 | - | LYST | chr1 | 235850347 | - |
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FusionProtFeatures for B3GALNT2_LYST |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| B3GALNT2 | LYST |
| Beta-1,3-N-acetylgalactosaminyltransferase thatsynthesizes a unique carbohydrate structure, GalNAc-beta-1-3GlcNAc, on N- and O-glycans. Has no galactose nor galactosaminyltransferase activity toward any acceptor substrate. Involved inalpha-dystroglycan (DAG1) glycosylation: acts coordinately withGTDC2/POMGnT2 to synthesize a GalNAc-beta3-GlcNAc-beta-terminus atthe 4-position of protein O-mannose in the biosynthesis of thephosphorylated O-mannosyl trisaccharide (N-acetylgalactosamine-beta-3-N-acetylglucosamine-beta-4-(phosphate-6-)mannose), acarbohydrate structure present in alpha-dystroglycan, which isrequired for binding laminin G-like domain-containingextracellular proteins with high affinity.{ECO:0000269|PubMed:14724282, ECO:0000269|PubMed:23453667,ECO:0000269|PubMed:23929950}. | May be required for sorting endosomal resident proteinsinto late multivesicular endosomes by a mechanism involvingmicrotubules. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | B3GALNT2 | chr1:235647638 | chr1:235850347 | ENST00000313984 | - | 5 | 8 | 1_6 | 226 | 327 | Topological domain | Cytoplasmic |
| Hgene | B3GALNT2 | chr1:235647638 | chr1:235850347 | ENST00000366600 | - | 4 | 12 | 1_6 | 185 | 501 | Topological domain | Cytoplasmic |
| Hgene | B3GALNT2 | chr1:235647638 | chr1:235850347 | ENST00000313984 | - | 5 | 8 | 7_23 | 226 | 327 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Hgene | B3GALNT2 | chr1:235647638 | chr1:235850347 | ENST00000366600 | - | 4 | 12 | 7_23 | 185 | 501 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 3614_3653 | 3567 | 3802 | Repeat | Note=WD 4 |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 3656_3699 | 3567 | 3802 | Repeat | Note=WD 5 |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 3700_3744 | 3567 | 3802 | Repeat | Note=WD 6 |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 3749_3788 | 3567 | 3802 | Repeat | Note=WD 7 |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 3614_3653 | 3567 | 3802 | Repeat | Note=WD 4 |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 3656_3699 | 3567 | 3802 | Repeat | Note=WD 5 |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 3700_3744 | 3567 | 3802 | Repeat | Note=WD 6 |
| Tgene | >LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 3749_3788 | 3567 | 3802 | Repeat | Note=WD 7 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >B3GALNT2 | chr1:235647638 | chr1:235850347 | ENST00000313984 | - | 5 | 8 | 24_500 | 226 | 327 | Topological domain | Lumenal |
| Hgene | >B3GALNT2 | chr1:235647638 | chr1:235850347 | ENST00000366600 | - | 4 | 12 | 24_500 | 185 | 501 | Topological domain | Lumenal |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 2448_2452 | 3567 | 3802 | Compositional bias | Note=Poly-Leu |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 31_36 | 3567 | 3802 | Compositional bias | Note=Poly-Glu |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 2448_2452 | 3567 | 3802 | Compositional bias | Note=Poly-Leu |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 31_36 | 3567 | 3802 | Compositional bias | Note=Poly-Glu |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 3009_3115 | 3567 | 3802 | Domain | BEACH-type PH |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 3120_3422 | 3567 | 3802 | Domain | BEACH |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 3009_3115 | 3567 | 3802 | Domain | BEACH-type PH |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 3120_3422 | 3567 | 3802 | Domain | BEACH |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 1582_1626 | 3567 | 3802 | Repeat | Note=WD 2 |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 3563_3602 | 3567 | 3802 | Repeat | Note=WD 3 |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389793 | - | 46 | 53 | 662_700 | 3567 | 3802 | Repeat | Note=WD 1 |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 1582_1626 | 3567 | 3802 | Repeat | Note=WD 2 |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 3563_3602 | 3567 | 3802 | Repeat | Note=WD 3 |
| Tgene | LYST | chr1:235647638 | chr1:235850347 | ENST00000389794 | - | 46 | 53 | 662_700 | 3567 | 3802 | Repeat | Note=WD 1 |
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FusionGeneSequence for B3GALNT2_LYST |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_B3GALNT2_ENST00000366600_chr1_235647638_-_LYST_ENST00000389794_chr1_235850347_-_420aa MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLV KFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY QAEQEVTSCAWVPDSCQLFTGSKCGVITAYTNRFTSSTPSEIEMETQIHLYGHTEEITSLFVCKPYSILISVSRDGTCIIWDLNRLCYVQ SLAGHKSPVTAVSASETSGDIATVCDSAGGGSDLRLWTVNGDLVGHVHCREIICSVAFSNQPEGVSINVIAGGLENGIVRLWSTWDLKPV >In-frame_B3GALNT2_ENST00000366600_chr1_235647638_-_LYST_ENST00000389793_chr1_235850347_-_420aa MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPADQLALFPQWKSTHYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLV KFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGLPEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLY QAEQEVTSCAWVPDSCQLFTGSKCGVITAYTNRFTSSTPSEIEMETQIHLYGHTEEITSLFVCKPYSILISVSRDGTCIIWDLNRLCYVQ SLAGHKSPVTAVSASETSGDIATVCDSAGGGSDLRLWTVNGDLVGHVHCREIICSVAFSNQPEGVSINVIAGGLENGIVRLWSTWDLKPV >In-frame_B3GALNT2_ENST00000313984_chr1_235647638_-_LYST_ENST00000389794_chr1_235850347_-_461aa MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPAGGVSLLLPRLECNGAVSAHPNLHLPGSRDSPASASQVAGITDQLALFPQWKST HYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEVTSCAWVPDSCQLFTGSKCGVITAYTNRFTSSTPSEIEMETQIH LYGHTEEITSLFVCKPYSILISVSRDGTCIIWDLNRLCYVQSLAGHKSPVTAVSASETSGDIATVCDSAGGGSDLRLWTVNGDLVGHVHC REIICSVAFSNQPEGVSINVIAGGLENGIVRLWSTWDLKPVREITFPKSNKPIISLTFSCDGHHLYTANSDGTVIAWCRKDQQRLKQPMF >In-frame_B3GALNT2_ENST00000313984_chr1_235647638_-_LYST_ENST00000389793_chr1_235850347_-_461aa MRNWLVLLCPCVLGAALHLWLRLRSPPPACASGAGPAGGVSLLLPRLECNGAVSAHPNLHLPGSRDSPASASQVAGITDQLALFPQWKST HYDVVVGVLSARNNHELRNVIRSTWMRHLLQHPTLSQRVLVKFIIGAHGCEVPVEDREDPYSCKLLNITNPVLNQEIEAFSLSEDTSSGL PEDRVVSVSFRVLYPIVITSLGVFYDANDVGFQRNITVKLYQAEQEVTSCAWVPDSCQLFTGSKCGVITAYTNRFTSSTPSEIEMETQIH LYGHTEEITSLFVCKPYSILISVSRDGTCIIWDLNRLCYVQSLAGHKSPVTAVSASETSGDIATVCDSAGGGSDLRLWTVNGDLVGHVHC REIICSVAFSNQPEGVSINVIAGGLENGIVRLWSTWDLKPVREITFPKSNKPIISLTFSCDGHHLYTANSDGTVIAWCRKDQQRLKQPMF |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_B3GALNT2_ENST00000366600_chr1_235647638_-_LYST_ENST00000389794_chr1_235850347_-_1260nt ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGC GCCTCCGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCT CGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTG AAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCA GTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGA GTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTAT CAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGACAGTTGCCAGCTGTTTACTGGAAGCAAATGCGGTGTCATCACAGCCTAC ACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAATGGAGACTCAAATACATCTCTATGGTCACACAGAAGAGATAACCAGCTTA TTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAGAGACGGAACCTGCATCATATGGGATTTAAACAGGTTATGCTATGTACAA AGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCAGTGAAACCTCAGGTGATATTGCTACTGTGTGTGATTCAGCTGGCGGA GGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAAC CAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTAAGGTTATGGAGCACATGGGACTTAAAGCCTGTG AGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAGCCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGAT GGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGGTGA >In-frame_B3GALNT2_ENST00000366600_chr1_235647638_-_LYST_ENST00000389793_chr1_235850347_-_1260nt ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGC GCCTCCGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCT CGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTG AAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCA GTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGA GTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTAT CAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGACAGTTGCCAGCTGTTTACTGGAAGCAAATGCGGTGTCATCACAGCCTAC ACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAATGGAGACTCAAATACATCTCTATGGTCACACAGAAGAGATAACCAGCTTA TTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAGAGACGGAACCTGCATCATATGGGATTTAAACAGGTTATGCTATGTACAA AGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCAGTGAAACCTCAGGTGATATTGCTACTGTGTGTGATTCAGCTGGCGGA GGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAAC CAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTAAGGTTATGGAGCACATGGGACTTAAAGCCTGTG AGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAGCCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGAT GGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGGTGA >In-frame_B3GALNT2_ENST00000313984_chr1_235647638_-_LYST_ENST00000389794_chr1_235850347_-_1383nt ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGC GCCTCCGGGGCCGGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGCTCACCCCAACCTCCAC CTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATAACAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACT CACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTA CAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCT TATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTG CCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTG GGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGACAGTTGCCAGCTGTTT ACTGGAAGCAAATGCGGTGTCATCACAGCCTACACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAATGGAGACTCAAATACAT CTCTATGGTCACACAGAAGAGATAACCAGCTTATTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAGAGACGGAACCTGCATC ATATGGGATTTAAACAGGTTATGCTATGTACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCAGTGAAACCTCAGGT GATATTGCTACTGTGTGTGATTCAGCTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGC AGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTA AGGTTATGGAGCACATGGGACTTAAAGCCTGTGAGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAGCCTTACATTTTCTTGT GATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTC >In-frame_B3GALNT2_ENST00000313984_chr1_235647638_-_LYST_ENST00000389793_chr1_235850347_-_1383nt ATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGC GCCTCCGGGGCCGGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGCTCACCCCAACCTCCAC CTCCCGGGTTCAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATAACAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACT CACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTA CAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCT TATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTG CCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTG GGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGACAGTTGCCAGCTGTTT ACTGGAAGCAAATGCGGTGTCATCACAGCCTACACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAATGGAGACTCAAATACAT CTCTATGGTCACACAGAAGAGATAACCAGCTTATTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAGAGACGGAACCTGCATC ATATGGGATTTAAACAGGTTATGCTATGTACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCAGTGAAACCTCAGGT GATATTGCTACTGTGTGTGATTCAGCTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGC AGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTA AGGTTATGGAGCACATGGGACTTAAAGCCTGTGAGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAGCCTTACATTTTCTTGT GATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_B3GALNT2_ENST00000366600_chr1_235647638_-_LYST_ENST00000389794_chr1_235850347_-_3388nt AGGCGGAGGGGGCGGGGCTTCGGCCGGCTAAGCCGCGGCCACCCGCGGTCTGAGGGACCGGAGGAGCGGGGCCGGGAGCTGCGAGGAGCC CTCCAGACGTCGCCGAGCGCGAGGGCGGGCGTGCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCAGGTCCCCT CCCTCTCCGCCGGGACGCGGGAGAGCCCGGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGG GGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCC TCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTG GATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGA AGACAGGGAAGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGA CACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTA CGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGA CAGTTGCCAGCTGTTTACTGGAAGCAAATGCGGTGTCATCACAGCCTACACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAAT GGAGACTCAAATACATCTCTATGGTCACACAGAAGAGATAACCAGCTTATTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAG AGACGGAACCTGCATCATATGGGATTTAAACAGGTTATGCTATGTACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGC CAGTGAAACCTCAGGTGATATTGCTACTGTGTGTGATTCAGCTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGT TGGACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATT AGAAAATGGAATTGTAAGGTTATGGAGCACATGGGACTTAAAGCCTGTGAGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAG CCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTT GAAACAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGGTGAATGCGAATGAACTTCACGTTCTCCAAAGCACTTTAACTCCA AACTAGATTTGTTGACTTCACCAGTTTTAGGAGGTTGAACCTAAAGAAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTAT TCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTTCTATTTTAGTGATAATCTGGAAGATTGTGTCAATATG CACTAGCCAACAAGTTTTAAGCCTCGCATGGTACATTAAAATGATATTCTTAAAATTTTTTCCCACCAAGGTATTCCAAAGAAAATATTA AGGTCTCCCCTTTTTCTATGATTCCAAAAGGACCAGTAGAATTTAAATTGGTTGGTTGATTGTTTATATAAAACACACTAAAATTATATT TTAAAAGTTTACTGCCATGAAATACTCCTCCCACCACACACACATGCTCCAAAAGAGGAAAGAAAAAAAGATAATTTTTAGGACTTGATA ATTGCTTTCTTTGAGAAGCAAATTATTCAGTAGGTGCCTCTGTACCAAATATTTTATGGAATATCTAAATACTAAAATAAACTATGAATG AATCTCAAAATTAGGCAGTTTTTGCCAGTTGCTTTCTTAGCTCAAAGGAGAACCAGAATTTTTTTGACAGCCACAAACAAGAATACAGGT ATCTTGGATTTCAGACACATTCTGTTTCTTCATAAAAATTTTACTTAAAATCTGTAACGCTAGATATTGACTATCCTTAGTTGAGTCACT GAGGTTTAAACACAATGGTAAGTCTTAAAGTCTGCTATTTACAGAGCATTGAATCTGTACCAATTTGCAATAGAAAGCCTTCAGTATGCA AGAAGTTTGCATGGGTATTAAGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCCCCAAAACAGAATTATA AAAGCTTACTTTAAACAGGAGGCAGAATAATTCTTTTAGGAAACCATTTCATTCTGTTTCTACTAACCTATACCATCTGAGAATTCTAGG AAGAATAATAAAATCTCGTGTATTCCACAGCAAACTTACATACCATAAAGACAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCA TATGATGGCTGTCTGTATATTTTTACTTGGGGTGCTGCTTTATTGGCTTTGAAAACACTGTCAGATAAGCTCAGTAATATGTTACCATGG GATAAAAATATGTATCCCTGCCTAAGAATAACTTGTGCATTTGTTATGGAAATTTAATTCATATGGTGTTTACAGTACTACTTTTGTAAC TTCCAGACTTTCTAAAACATTCTGCTTAAAAACCATATAAAATATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACG TGGCCATGTATGCTTTAACCTTAAACTGCATACACATGTAGTGATACCTAGGCTGCATTTAGATCACCGTGTGCTCAGGCCAGGTGTGAA TCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAAAAATTGCAGCTATTGTCT AGCTTTCATTTTTTTACTGAGAACTTTAAATTAGTCCCCTATTAGAATAGGGTTGCTACTCATCTTTTTTTAAAAACCGAATTTCATCAT TTATCTAAAGAGAAAATATGCAGAATAACTGGTCTTGTTAAGAGTGCAATATTATATTTTTATGTAAAAATAAAAATTAATTTGGGGGGA TTATTTATTCAGCATGAAACCTAATATGTATATGTTTGAAATACTTCATAATGTGCATGTTGTAGCAAACATTTCTGTAAATTATCACAA >In-frame_B3GALNT2_ENST00000366600_chr1_235647638_-_LYST_ENST00000389793_chr1_235850347_-_3379nt AGGCGGAGGGGGCGGGGCTTCGGCCGGCTAAGCCGCGGCCACCCGCGGTCTGAGGGACCGGAGGAGCGGGGCCGGGAGCTGCGAGGAGCC CTCCAGACGTCGCCGAGCGCGAGGGCGGGCGTGCTCGGAGTGGTCGCTCGTCAGCCGCCGCCCCTCAGTCTCCGCACTTGCAGGTCCCCT CCCTCTCCGCCGGGACGCGGGAGAGCCCGGCTCGCGGCGGGGGCGGCCAATGCGAAACTGGCTGGTGCTGCTGTGCCCGTGTGTGCTCGG GGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGGCCGGCCCTGCAGATCAGTTGGCCTTATTTCC TCAGTGGAAATCTACTCACTATGATGTGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTG GATGAGACATTTGCTACAGCATCCCACATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGA AGACAGGGAAGATCCTTATTCCTGTAAACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGA CACTTCATCGGGGCTGCCTGAGGATCGAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTA CGATGCCAATGATGTGGGTTTCCAGAGGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGA CAGTTGCCAGCTGTTTACTGGAAGCAAATGCGGTGTCATCACAGCCTACACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAAT GGAGACTCAAATACATCTCTATGGTCACACAGAAGAGATAACCAGCTTATTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAG AGACGGAACCTGCATCATATGGGATTTAAACAGGTTATGCTATGTACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGC CAGTGAAACCTCAGGTGATATTGCTACTGTGTGTGATTCAGCTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGT TGGACATGTCCACTGCAGGGAGATCATCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATT AGAAAATGGAATTGTAAGGTTATGGAGCACATGGGACTTAAAGCCTGTGAGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAG CCTTACATTTTCTTGTGATGGCCACCATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTT GAAACAGCCAATGTTCTATTCCTTCCTTAGCAGCTATGCAGCCGGGTGAATGCGAATGAACTTCACGTTCTCCAAAGCACTTTAACTCCA AACTAGATTTGTTGACTTCACCAGTTTTAGGAGGTTGAACCTAAAGAAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTAT TCATCTGCACAAAATTCTGAAGAGTCACATGATCCTAAGAGGAAAGTTCTGTTCTATTTTAGTGATAATCTGGAAGATTGTGTCAATATG CACTAGCCAACAAGTTTTAAGCCTCGCATGGTACATTAAAATGATATTCTTAAAATTTTTTCCCACCAAGGTATTCCAAAGAAAATATTA AGGTCTCCCCTTTTTCTATGATTCCAAAAGGACCAGTAGAATTTAAATTGGTTGGTTGATTGTTTATATAAAACACACTAAAATTATATT TTAAAAGTTTACTGCCATGAAATACTCCTCCCACCACACACACATGCTCCAAAAGAGGAAAGAAAAAAAGATAATTTTTAGGACTTGATA ATTGCTTTCTTTGAGAAGCAAATTATTCAGTAGGTGCCTCTGTACCAAATATTTTATGGAATATCTAAATACTAAAATAAACTATGAATG AATCTCAAAATTAGGCAGTTTTTGCCAGTTGCTTTCTTAGCTCAAAGGAGAACCAGAATTTTTTTGACAGCCACAAACAAGAATACAGGT ATCTTGGATTTCAGACACATTCTGTTTCTTCATAAAAATTTTACTTAAAATCTGTAACGCTAGATATTGACTATCCTTAGTTGAGTCACT GAGGTTTAAACACAATGGTAAGTCTTAAAGTCTGCTATTTACAGAGCATTGAATCTGTACCAATTTGCAATAGAAAGCCTTCAGTATGCA AGAAGTTTGCATGGGTATTAAGAACACAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCCCCAAAACAGAATTATA AAAGCTTACTTTAAACAGGAGGCAGAATAATTCTTTTAGGAAACCATTTCATTCTGTTTCTACTAACCTATACCATCTGAGAATTCTAGG AAGAATAATAAAATCTCGTGTATTCCACAGCAAACTTACATACCATAAAGACAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCA TATGATGGCTGTCTGTATATTTTTACTTGGGGTGCTGCTTTATTGGCTTTGAAAACACTGTCAGATAAGCTCAGTAATATGTTACCATGG GATAAAAATATGTATCCCTGCCTAAGAATAACTTGTGCATTTGTTATGGAAATTTAATTCATATGGTGTTTACAGTACTACTTTTGTAAC TTCCAGACTTTCTAAAACATTCTGCTTAAAAACCATATAAAATATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACG TGGCCATGTATGCTTTAACCTTAAACTGCATACACATGTAGTGATACCTAGGCTGCATTTAGATCACCGTGTGCTCAGGCCAGGTGTGAA TCCTGAGGTCCATGGAGGTGCAGAGATGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAAAAATTGCAGCTATTGTCT AGCTTTCATTTTTTTACTGAGAACTTTAAATTAGTCCCCTATTAGAATAGGGTTGCTACTCATCTTTTTTTAAAAACCGAATTTCATCAT TTATCTAAAGAGAAAATATGCAGAATAACTGGTCTTGTTAAGAGTGCAATATTATATTTTTATGTAAAAATAAAAATTAATTTGGGGGGA TTATTTATTCAGCATGAAACCTAATATGTATATGTTTGAAATACTTCATAATGTGCATGTTGTAGCAAACATTTCTGTAAATTATCACAA >In-frame_B3GALNT2_ENST00000313984_chr1_235647638_-_LYST_ENST00000389794_chr1_235850347_-_3452nt GGAGGAGCGGGGCCGGGAGCTGCGAGGAGCCCTCCAGACGTCGCCGAGCGCGAGGGCGGGCGTGCTCGGAGTGGTCGCTCGTCAGCCGCC GCCCCTCAGTCTCCGCACTTGCAGGTCCCCTCCCTCTCCGCCGGGACGCGGGAGAGCCCGGCTCGCGGCGGGGGCGGCCAATGCGAAACT GGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGG CCGGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGGGTT CAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATAACAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGATG TGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTACAGCATCCCA CATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCTTATTCCTGTA AACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATC GAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGA GGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGACAGTTGCCAGCTGTTTACTGGAAGCA AATGCGGTGTCATCACAGCCTACACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAATGGAGACTCAAATACATCTCTATGGTC ACACAGAAGAGATAACCAGCTTATTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAGAGACGGAACCTGCATCATATGGGATT TAAACAGGTTATGCTATGTACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCAGTGAAACCTCAGGTGATATTGCTA CTGTGTGTGATTCAGCTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGCAGGGAGATCA TCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTAAGGTTATGGA GCACATGGGACTTAAAGCCTGTGAGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAGCCTTACATTTTCTTGTGATGGCCACC ATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCC TTAGCAGCTATGCAGCCGGGTGAATGCGAATGAACTTCACGTTCTCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTT TTAGGAGGTTGAACCTAAAGAAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCACAAAATTCTGAAGAGTC ACATGATCCTAAGAGGAAAGTTCTGTTCTATTTTAGTGATAATCTGGAAGATTGTGTCAATATGCACTAGCCAACAAGTTTTAAGCCTCG CATGGTACATTAAAATGATATTCTTAAAATTTTTTCCCACCAAGGTATTCCAAAGAAAATATTAAGGTCTCCCCTTTTTCTATGATTCCA AAAGGACCAGTAGAATTTAAATTGGTTGGTTGATTGTTTATATAAAACACACTAAAATTATATTTTAAAAGTTTACTGCCATGAAATACT CCTCCCACCACACACACATGCTCCAAAAGAGGAAAGAAAAAAAGATAATTTTTAGGACTTGATAATTGCTTTCTTTGAGAAGCAAATTAT TCAGTAGGTGCCTCTGTACCAAATATTTTATGGAATATCTAAATACTAAAATAAACTATGAATGAATCTCAAAATTAGGCAGTTTTTGCC AGTTGCTTTCTTAGCTCAAAGGAGAACCAGAATTTTTTTGACAGCCACAAACAAGAATACAGGTATCTTGGATTTCAGACACATTCTGTT TCTTCATAAAAATTTTACTTAAAATCTGTAACGCTAGATATTGACTATCCTTAGTTGAGTCACTGAGGTTTAAACACAATGGTAAGTCTT AAAGTCTGCTATTTACAGAGCATTGAATCTGTACCAATTTGCAATAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACA CAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCCCCAAAACAGAATTATAAAAGCTTACTTTAAACAGGAGGCAGA ATAATTCTTTTAGGAAACCATTTCATTCTGTTTCTACTAACCTATACCATCTGAGAATTCTAGGAAGAATAATAAAATCTCGTGTATTCC ACAGCAAACTTACATACCATAAAGACAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTGTATATTTTTAC TTGGGGTGCTGCTTTATTGGCTTTGAAAACACTGTCAGATAAGCTCAGTAATATGTTACCATGGGATAAAAATATGTATCCCTGCCTAAG AATAACTTGTGCATTTGTTATGGAAATTTAATTCATATGGTGTTTACAGTACTACTTTTGTAACTTCCAGACTTTCTAAAACATTCTGCT TAAAAACCATATAAAATATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCATGTATGCTTTAACCTTAAAC TGCATACACATGTAGTGATACCTAGGCTGCATTTAGATCACCGTGTGCTCAGGCCAGGTGTGAATCCTGAGGTCCATGGAGGTGCAGAGA TGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAAAAATTGCAGCTATTGTCTAGCTTTCATTTTTTTACTGAGAACTT TAAATTAGTCCCCTATTAGAATAGGGTTGCTACTCATCTTTTTTTAAAAACCGAATTTCATCATTTATCTAAAGAGAAAATATGCAGAAT AACTGGTCTTGTTAAGAGTGCAATATTATATTTTTATGTAAAAATAAAAATTAATTTGGGGGGATTATTTATTCAGCATGAAACCTAATA TGTATATGTTTGAAATACTTCATAATGTGCATGTTGTAGCAAACATTTCTGTAAATTATCACAAGCTCTGTTACCTTTATATACACTGCC >In-frame_B3GALNT2_ENST00000313984_chr1_235647638_-_LYST_ENST00000389793_chr1_235850347_-_3443nt GGAGGAGCGGGGCCGGGAGCTGCGAGGAGCCCTCCAGACGTCGCCGAGCGCGAGGGCGGGCGTGCTCGGAGTGGTCGCTCGTCAGCCGCC GCCCCTCAGTCTCCGCACTTGCAGGTCCCCTCCCTCTCCGCCGGGACGCGGGAGAGCCCGGCTCGCGGCGGGGGCGGCCAATGCGAAACT GGCTGGTGCTGCTGTGCCCGTGTGTGCTCGGGGCCGCGCTGCACCTCTGGCTGCGGCTGCGCTCCCCGCCGCCCGCCTGCGCCTCCGGGG CCGGCCCTGCAGGTGGAGTCTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGGTCTCGGCTCACCCCAACCTCCACCTCCCGGGTT CAAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATAACAGATCAGTTGGCCTTATTTCCTCAGTGGAAATCTACTCACTATGATG TGGTAGTTGGCGTGTTGTCAGCTCGCAATAACCATGAACTTCGAAACGTGATAAGAAGCACCTGGATGAGACATTTGCTACAGCATCCCA CATTAAGTCAACGTGTGCTTGTGAAGTTCATAATAGGTGCTCATGGCTGTGAAGTGCCTGTGGAAGACAGGGAAGATCCTTATTCCTGTA AACTACTCAACATCACAAATCCAGTTTTGAATCAGGAAATTGAAGCGTTCAGTCTGTCCGAAGACACTTCATCGGGGCTGCCTGAGGATC GAGTTGTCAGCGTGAGTTTCCGAGTTCTCTACCCCATCGTTATTACCAGTCTTGGAGTGTTCTACGATGCCAATGATGTGGGTTTCCAGA GGAACATCACTGTCAAACTTTATCAGGCAGAACAAGAGGTGACTAGTTGTGCTTGGGTGCCTGACAGTTGCCAGCTGTTTACTGGAAGCA AATGCGGTGTCATCACAGCCTACACAAACAGATTTACAAGCAGCACGCCATCAGAAATAGAAATGGAGACTCAAATACATCTCTATGGTC ACACAGAAGAGATAACCAGCTTATTTGTTTGCAAACCATACAGTATACTGATAAGTGTGAGCAGAGACGGAACCTGCATCATATGGGATT TAAACAGGTTATGCTATGTACAAAGTCTGGCGGGACACAAAAGCCCTGTCACAGCTGTCTCTGCCAGTGAAACCTCAGGTGATATTGCTA CTGTGTGTGATTCAGCTGGCGGAGGCAGTGACCTCAGACTCTGGACGGTGAACGGGGATCTCGTTGGACATGTCCACTGCAGGGAGATCA TCTGTTCCGTGGCTTTCTCCAACCAGCCTGAGGGAGTATCTATCAATGTAATCGCTGGGGGATTAGAAAATGGAATTGTAAGGTTATGGA GCACATGGGACTTAAAGCCTGTGAGAGAAATTACATTTCCCAAATCAAATAAGCCCATCATCAGCCTTACATTTTCTTGTGATGGCCACC ATTTGTACACAGCAAACAGTGATGGGACCGTGATTGCCTGGTGTCGGAAGGACCAGCAGCGCTTGAAACAGCCAATGTTCTATTCCTTCC TTAGCAGCTATGCAGCCGGGTGAATGCGAATGAACTTCACGTTCTCCAAAGCACTTTAACTCCAAACTAGATTTGTTGACTTCACCAGTT TTAGGAGGTTGAACCTAAAGAAATGGATGACTGGACAAACCATCCAAATAATGATAAAGTCTATTCATCTGCACAAAATTCTGAAGAGTC ACATGATCCTAAGAGGAAAGTTCTGTTCTATTTTAGTGATAATCTGGAAGATTGTGTCAATATGCACTAGCCAACAAGTTTTAAGCCTCG CATGGTACATTAAAATGATATTCTTAAAATTTTTTCCCACCAAGGTATTCCAAAGAAAATATTAAGGTCTCCCCTTTTTCTATGATTCCA AAAGGACCAGTAGAATTTAAATTGGTTGGTTGATTGTTTATATAAAACACACTAAAATTATATTTTAAAAGTTTACTGCCATGAAATACT CCTCCCACCACACACACATGCTCCAAAAGAGGAAAGAAAAAAAGATAATTTTTAGGACTTGATAATTGCTTTCTTTGAGAAGCAAATTAT TCAGTAGGTGCCTCTGTACCAAATATTTTATGGAATATCTAAATACTAAAATAAACTATGAATGAATCTCAAAATTAGGCAGTTTTTGCC AGTTGCTTTCTTAGCTCAAAGGAGAACCAGAATTTTTTTGACAGCCACAAACAAGAATACAGGTATCTTGGATTTCAGACACATTCTGTT TCTTCATAAAAATTTTACTTAAAATCTGTAACGCTAGATATTGACTATCCTTAGTTGAGTCACTGAGGTTTAAACACAATGGTAAGTCTT AAAGTCTGCTATTTACAGAGCATTGAATCTGTACCAATTTGCAATAGAAAGCCTTCAGTATGCAAGAAGTTTGCATGGGTATTAAGAACA CAGCCTAAATAAGGCATTTGATCTAATCTGCAGGAAGAATTTTCTTCCCCAAAACAGAATTATAAAAGCTTACTTTAAACAGGAGGCAGA ATAATTCTTTTAGGAAACCATTTCATTCTGTTTCTACTAACCTATACCATCTGAGAATTCTAGGAAGAATAATAAAATCTCGTGTATTCC ACAGCAAACTTACATACCATAAAGACAGAATTCCTAAACATCTTGGAGCCGTCTGTCTCTCCCATATGATGGCTGTCTGTATATTTTTAC TTGGGGTGCTGCTTTATTGGCTTTGAAAACACTGTCAGATAAGCTCAGTAATATGTTACCATGGGATAAAAATATGTATCCCTGCCTAAG AATAACTTGTGCATTTGTTATGGAAATTTAATTCATATGGTGTTTACAGTACTACTTTTGTAACTTCCAGACTTTCTAAAACATTCTGCT TAAAAACCATATAAAATATAATTCCAAAGTCTCTGCTGTCAAGATAGATTCGAGAGAAAGCACGTGGCCATGTATGCTTTAACCTTAAAC TGCATACACATGTAGTGATACCTAGGCTGCATTTAGATCACCGTGTGCTCAGGCCAGGTGTGAATCCTGAGGTCCATGGAGGTGCAGAGA TGAGATTACTCCTATTCACGTTGAAGTGATTTGCTTTGTTAACAAAAAATTGCAGCTATTGTCTAGCTTTCATTTTTTTACTGAGAACTT TAAATTAGTCCCCTATTAGAATAGGGTTGCTACTCATCTTTTTTTAAAAACCGAATTTCATCATTTATCTAAAGAGAAAATATGCAGAAT AACTGGTCTTGTTAAGAGTGCAATATTATATTTTTATGTAAAAATAAAAATTAATTTGGGGGGATTATTTATTCAGCATGAAACCTAATA TGTATATGTTTGAAATACTTCATAATGTGCATGTTGTAGCAAACATTTCTGTAAATTATCACAAGCTCTGTTACCTTTATATACACTGCC |
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FusionGenePPI for B3GALNT2_LYST |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| B3GALNT2 | FBXO6, NXF1, NRG1, IDS, PARP16, AGMAT, SFRP4, CHST8, FBXW7, OS9, EIF2B2, YY1AP1, TAZ, TRIM25 | LYST | YWHAQ, CSNK2B, TNNI3, HGS, YWHAB, ESRRA, KPNB1, MRPS31, DGCR14, NCDN, PCBP4, VTA1, DNAJC14, CNTROB, ATN1, EFS, MED12, HNRNPM, CENPJ, MRPL17, ZNF521, CELF4, YWHAZ, HNRNPH2, LLGL2, MLH1, PPIA, TACC1, DAP3, MYH13, SAP30, KIF1C, GAR1, KLC3 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for B3GALNT2_LYST |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for B3GALNT2_LYST |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | B3GALNT2 | C3554638 | MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE ANOMALIES), TYPE A, 11 | 1 | UNIPROT |
| Tgene | LYST | C0007965 | Chediak-Higashi Syndrome | 2 | CTD_human;ORPHANET;UNIPROT |
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