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Fusion gene ID: 36038 |
FusionGeneSummary for SRPK2_DYNC1I1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SRPK2_DYNC1I1 | Fusion gene ID: 36038 | Hgene | Tgene | Gene symbol | SRPK2 | DYNC1I1 | Gene ID | 6733 | 1780 |
Gene name | SRSF protein kinase 2 | dynein cytoplasmic 1 intermediate chain 1 | |
Synonyms | SFRSK2 | DNCI1|DNCIC1 | |
Cytomap | 7q22.3 | 7q21.3 | |
Type of gene | protein-coding | protein-coding | |
Description | SRSF protein kinase 2SFRS protein kinase 2SR protein kinase 2SR-protein-specific kinase 2serine kinase SRPK2serine/arginine-rich protein-specific kinase 2serine/arginine-rich splicing factor kinase 2serine/threonine-protein kinase SRPK2 | cytoplasmic dynein 1 intermediate chain 1DH IC-1cytoplasmic dynein intermediate chain 1dynein intermediate chain 1, cytosolicdynein, cytoplasmic, intermediate polypeptide 1 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | P78362 | O14576 | |
Ensembl transtripts involved in fusion gene | ENST00000393651, ENST00000357311, ENST00000489828, ENST00000493638, | ENST00000447467, ENST00000324972, ENST00000537881, ENST00000437599, ENST00000359388, ENST00000413338, ENST00000457059, ENST00000497626, | |
Fusion gene scores | * DoF score | 11 X 6 X 10=660 | 6 X 5 X 6=180 |
# samples | 19 | 7 | |
** MAII score | log2(19/660*10)=-1.79646660591487 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/180*10)=-1.36257007938471 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SRPK2 [Title/Abstract] AND DYNC1I1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SRPK2 | GO:0000245 | spliceosomal complex assembly | 9472028 |
Hgene | SRPK2 | GO:0006468 | protein phosphorylation | 9472028 |
Hgene | SRPK2 | GO:0008284 | positive regulation of cell proliferation | 18559500 |
Hgene | SRPK2 | GO:0008380 | RNA splicing | 9472028 |
Hgene | SRPK2 | GO:0035556 | intracellular signal transduction | 9472028 |
Hgene | SRPK2 | GO:0045070 | positive regulation of viral genome replication | 20498328 |
Hgene | SRPK2 | GO:0045071 | negative regulation of viral genome replication | 12417631 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUAD | TCGA-NJ-A4YQ-01A | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000393651 | ENST00000447467 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
In-frame | ENST00000393651 | ENST00000324972 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
In-frame | ENST00000393651 | ENST00000537881 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
In-frame | ENST00000393651 | ENST00000437599 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
In-frame | ENST00000393651 | ENST00000359388 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
5CDS-intron | ENST00000393651 | ENST00000413338 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
5CDS-intron | ENST00000393651 | ENST00000457059 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
5CDS-intron | ENST00000393651 | ENST00000497626 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000357311 | ENST00000447467 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000357311 | ENST00000324972 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000357311 | ENST00000537881 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000357311 | ENST00000437599 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000357311 | ENST00000359388 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000357311 | ENST00000413338 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000357311 | ENST00000457059 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000357311 | ENST00000497626 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000489828 | ENST00000447467 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000489828 | ENST00000324972 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000489828 | ENST00000537881 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000489828 | ENST00000437599 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000489828 | ENST00000359388 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000489828 | ENST00000413338 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000489828 | ENST00000457059 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000489828 | ENST00000497626 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000493638 | ENST00000447467 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000493638 | ENST00000324972 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000493638 | ENST00000537881 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000493638 | ENST00000437599 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-3CDS | ENST00000493638 | ENST00000359388 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000493638 | ENST00000413338 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000493638 | ENST00000457059 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
intron-intron | ENST00000493638 | ENST00000497626 | SRPK2 | chr7 | 105029095 | - | DYNC1I1 | chr7 | 95499195 | + |
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FusionProtFeatures for SRPK2_DYNC1I1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
SRPK2 | DYNC1I1 |
Serine/arginine-rich protein-specific kinase whichspecifically phosphorylates its substrates at serine residueslocated in regions rich in arginine/serine dipeptides, known as RSdomains and is involved in the phosphorylation of SR splicingfactors and the regulation of splicing. Promotes neuronalapoptosis by up-regulating cyclin-D1 (CCND1) expression. This isdone by the phosphorylation of SRSF2, leading to the suppressionof p53/TP53 phosphorylation thereby relieving the repressiveeffect of p53/TP53 on cyclin-D1 (CCND1) expression. PhosphorylatesACIN1, and redistributes it from the nuclear speckles to thenucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in spliceosomal B complexformation via the phosphorylation of DDX23/PRP28. Can mediatehepatitis B virus (HBV) core protein phosphorylation. Plays anegative role in the regulation of HBV replication through amechanism not involving the phosphorylation of the core proteinbut by reducing the packaging efficiency of the pregenomic RNA(pgRNA) without affecting the formation of the viral coreparticles. {ECO:0000269|PubMed:12134018,ECO:0000269|PubMed:16122776, ECO:0000269|PubMed:18425142,ECO:0000269|PubMed:18559500, ECO:0000269|PubMed:19592491,ECO:0000269|PubMed:21056976, ECO:0000269|PubMed:21157427,ECO:0000269|PubMed:9472028}. | Acts as one of several non-catalytic accessorycomponents of the cytoplasmic dynein 1 complex that are thought tobe involved in linking dynein to cargos and to adapter proteinsthat regulate dynein function. Cytoplasmic dynein 1 acts as amotor for the intracellular retrograde motility of vesicles andorganelles along microtubules. The intermediate chains mediate thebinding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. May play a role in mediating the interaction ofcytoplasmic dynein with membranous organelles and kinetochores. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 285_334 | 141 | 646 | Repeat | Note=WD 1 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 338_378 | 141 | 646 | Repeat | Note=WD 2 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 387_428 | 141 | 646 | Repeat | Note=WD 3 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 437_477 | 141 | 646 | Repeat | Note=WD 4 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 482_527 | 141 | 646 | Repeat | Note=WD 5 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 530_570 | 141 | 646 | Repeat | Note=WD 6 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 576_615 | 141 | 646 | Repeat | Note=WD 7 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 285_334 | 104 | 609 | Repeat | Note=WD 1 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 338_378 | 104 | 609 | Repeat | Note=WD 2 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 387_428 | 104 | 609 | Repeat | Note=WD 3 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 437_477 | 104 | 609 | Repeat | Note=WD 4 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 482_527 | 104 | 609 | Repeat | Note=WD 5 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 530_570 | 104 | 609 | Repeat | Note=WD 6 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 576_615 | 104 | 609 | Repeat | Note=WD 7 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 285_334 | 124 | 629 | Repeat | Note=WD 1 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 338_378 | 124 | 629 | Repeat | Note=WD 2 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 387_428 | 124 | 629 | Repeat | Note=WD 3 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 437_477 | 124 | 629 | Repeat | Note=WD 4 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 482_527 | 124 | 629 | Repeat | Note=WD 5 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 530_570 | 124 | 629 | Repeat | Note=WD 6 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 576_615 | 124 | 629 | Repeat | Note=WD 7 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 285_334 | 124 | 629 | Repeat | Note=WD 1 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 338_378 | 124 | 629 | Repeat | Note=WD 2 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 387_428 | 124 | 629 | Repeat | Note=WD 3 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 437_477 | 124 | 629 | Repeat | Note=WD 4 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 482_527 | 124 | 629 | Repeat | Note=WD 5 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 530_570 | 124 | 629 | Repeat | Note=WD 6 |
Tgene | >DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 576_615 | 124 | 629 | Repeat | Note=WD 7 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >SRPK2 | chr7:105029095 | chr7:95499195 | ENST00000357311 | - | 1 | 15 | 81_684 | -58 | 689 | Domain | Protein kinase |
Hgene | >SRPK2 | chr7:105029095 | chr7:95499195 | ENST00000393651 | - | 2 | 16 | 81_684 | 23 | 700 | Domain | Protein kinase |
Hgene | >SRPK2 | chr7:105029095 | chr7:95499195 | ENST00000489828 | - | 1 | 17 | 81_684 | -61 | 689 | Domain | Protein kinase |
Hgene | >SRPK2 | chr7:105029095 | chr7:95499195 | ENST00000357311 | - | 1 | 15 | 87_95 | -58 | 689 | Nucleotide binding | ATP |
Hgene | >SRPK2 | chr7:105029095 | chr7:95499195 | ENST00000393651 | - | 2 | 16 | 87_95 | 23 | 700 | Nucleotide binding | ATP |
Hgene | >SRPK2 | chr7:105029095 | chr7:95499195 | ENST00000489828 | - | 1 | 17 | 87_95 | -61 | 689 | Nucleotide binding | ATP |
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FusionGeneSequence for SRPK2_DYNC1I1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000447467_chr7_95499195_+_528aa MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000324972_chr7_95499195_+_528aa MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000537881_chr7_95499195_+_522aa MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000437599_chr7_95499195_+_528aa MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000359388_chr7_95499195_+_528aa MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000447467_chr7_95499195_+_1584nt ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000324972_chr7_95499195_+_1584nt ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000537881_chr7_95499195_+_1566nt ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGGGTCTTGCTATGTTGCCAGGCTGGTCTCAAAATTCCTGGACTCAAGCAATCCTCCTA >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000437599_chr7_95499195_+_1584nt ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000359388_chr7_95499195_+_1584nt ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000447467_chr7_95499195_+_2503nt GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000324972_chr7_95499195_+_2491nt GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000537881_chr7_95499195_+_1905nt GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA AGGCCGTATTTGGGTCTATGACGTTGGAGAGGGTCTTGCTATGTTGCCAGGCTGGTCTCAAAATTCCTGGACTCAAGCAATCCTCCTATG TTGGCCTCCCAAAGTGCTGGGATTACAGACATGAGCCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACCA AAATCTGGAAGTATAATTGTGGATATCTTTTAGTTCTTTCAGTTCTATCAGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCC TACATATTGAGGATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGTTTATTCCTAGTAATAATCCTTTTTC >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000437599_chr7_95499195_+_2503nt GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA >In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000359388_chr7_95499195_+_2503nt GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA |
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FusionGenePPI for SRPK2_DYNC1I1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SRPK2 | U2AF2, RNPS1, SRSF1, SRSF3, SRSF2, SRSF5, SRSF6, SNRNP70, LUC7L3, SRPK1, VAV2, ARRB2, CUL3, APP, ESR1, BARD1, U2AF1, DDX46, RBM23, RBM39, PRPF38A, CTNNBL1, SNIP1, ACIN1, ARGLU1, SNRNP27, YTHDC1, DDX21, LUC7L, SRRM1, PABPC4, PRPF4B, SRRM2, PNN, SRPK2, SNRPD1, EIF4A3, HNRNPM, NOP2, DHX15, SNRPA, SNRPC, PCBP1, BCLAF1, RBBP6, PABPC1, C1orf35, DROSHA, LUC7L2, SRSF8, HNRNPC, RBM8A, MAGOH, SRSF7, TJP2, ALMS1, HNRNPCL1, CLASRP, DIDO1, DDX50, SNRPB, DGCR8, THRAP3, HNRNPH2, DDX39A, DDX39B, CPSF6, SON, NUDT21, NSG1, CHTOP, CDK13, FOXN3, EIF1AY, CHD2, TNFRSF10C, CASK, AURKA, CHUK, ARPC1B, UBD, NCK2, AHCYL1, TLE4, ERN1, DNAJC8, GABARAP, ZRANB2, TDP2, PAK4, ABL1, POLB, NELFE, ERCC3, MDK, PSMA3, DDX6, PTBP1, APEX1, GTF2E1, SRI, YWHAB, RPL22, MAGEB1, CBX5, CLK1, CLK3, CDK7, ADPRH, TPD52, RWDD2B, YPEL3, FGF12, WDR5, PPIA, RPL41, TRA2B, RNF4, MRPS6, PRKAA1, SRSF9, IFIT5, MPP3, TCOF1, TRA2A, DHX8, DRAP1, BRD3, SEC23B, HMGN3, ZRSR2, ENOX2, SNRNP35, C4orf46, C17orf85, TAF7L, FAM76B, ATAT1, ARL6IP4, AMMECR1L, CSAG1, RSRC2, NPM2, CAND1, LCA5, FAM90A1, MAPKAPK5, CCDC28A, ARHGAP12, CHERP, GPR114, DAW1, CLDN19, MARCH10, LRRN4CL, DBF4B, TNIP2, MCOLN3, EPS8L3, C16orf78, SDR42E1, TRIM41, SREK1, SRSF12, TTN, RTF1, RIT1, C18orf25, EVI5L, RPL39L, CCDC97, PELI1, NGLY1, RSRC1, EGLN2, UBE2E2, ALKBH3, YPEL2, RBM15, RIT2, VRK1, VIMP, CCM2, RSRP1, HIRIP3, LCE3D, NSRP1, GABARAPL1, KCNN2, CDC42EP4, EPB41L1, OCEL1, ZMAT4, EPB41L4A, PDE7B, NXT2, APOBEC3C, HOMER3, CBLN4, NSMCE4A, SLAIN2, NUP50, BAIAP2, DRG1, NOP16, PPIL1, HBS1L, MAB21L2, SUPT16H, SNURF, CACNG2, STON1, AES, CLK2, ZSCAN9, FXR2, LUZP4, BMI1, PPM1G, PRPF8, NTRK1, C5orf42, ACTB, ACTG1, ADAMTS18, AKAP13, ALDOA, ALPL, ANK3, ANKFY1, ANKRD35, AP1M1, KIAA1244, ARSG, ASL, BAG3, BAZ1A, BCL9L, BUD13, EFCAB12, ELP6, CADPS2, CALCOCO1, CAMSAP1, CARD11, CARHSP1, MTCL1, CCDC86, CCDC88B, CDK12, CEP170, CHD1L, CHEK2, CLASP1, CLASP2, CLCNKA, CLU, CPSF7, CRTC1, YBX3, DCAF10, DDX3X, DNAH6, DNAH9, DOCK3, ECT2, EED, EIF3A, EIF4B, EIF4G1, ELAVL3, ENSA, EPB41L4B, EPM2A, EPS8L1, ERBB3, ERC1, F5, AMER1, FAM179B, FAM43A, NXPE4, FBXO24, FCHO1, FGFR3, FIP1L1, FMNL1, GBF1, GCC2, GGCX, GHR, GLRA4, GLTSCR2, GNGT2, GSE1, GTPBP4, GXYLT2, HERC3, HIST1H2BK, HIVEP1, HMCN2, HMGA1, HMGN2, HMGXB4, HNRNPA1, HNRNPA3, HNRNPK, HTATSF1, IRS2, ISLR, JMJD1C, KANK2, KHDRBS1, KIF11, KRT78, LBR, LDHC, LINC00322, LMNA, LMNB1, LMO7, LRRC34, LRRC52, MACF1, MAP1S, MAP4, MAP7, MAP7D1, MAPKAPK3, MAPRE1, MAST2, MATR3, MDC1, MFSD10, MIB2, MIPOL1, ZAK, MMP23B, MYCBP2, MYLIP, MYO18B, MYO1E, MZT2B, NADK, NAGK, NCL, NGDN, NKAP, NOLC1, NSUN5P2, NTHL1, NXF1, OTOF, PALLD, PCF11, PDCL3, PHF6, PHLDB1, PKD1L2, PLEKHA5, PNMAL2, POLDIP3, PPHLN1, PPP1R13L, PRPF38B, PRRC2A, PRRC2B, PRRC2C, PSMD13, PTPN22, RABEP1, RASGRF1, RBM15B, RBM19, RBMX, RIPK3, RNF219, RPL13, RPL34, RPL37, RPLP2, RPS26, RRM2B, RRP1, RRP1B, RSL1D1, RXFP1, S100A4, SAFB, SART1, SBK1, SCAF1, SDK2, SEC16B, SERPING1, PNISR, SGPL1, SIPA1L3, SLC13A2, SLC17A6, SLFN5, SLTM, SMCHD1, SPDEF, SPEN, SRC, SRSF11, SRXN1, SYCP2, TCEANC2, TMEM57, TMPO, TMPRSS11A, TMSB10, TNFAIP8L2, TNS3, TOP1, TRIP12, TUBA1B, TXN, UBR4, UPF3B, USP36, USP39, VAC14, VSTM2L, WDR24, WDR70, XRCC5, YRDC, YTHDC2, ZC3H13, ZC3H18, ZCCHC17, ZDHHC5, ZFC3H1, ZFHX4, ZFP91, ZMYM4, ZNF140, ZNF234, ZNF529, ZNF592, ZNF593, ZNF616, FOXK2, FOXL2, FOXQ1, YBX1, AKT1, INO80B, TRIM25 | DYNC1I1 | DYNLL2, DYNLRB1, DYNLL1, DYNLT1, DYNLT3, STAU1, DNM2, NUDT21, CADM4, C2orf44, FAM110A, KAT7, FBP1, TAOK1, RUNDC3B, MCC, FAM83D, RAP1GAP, DCTN1, GRB7, TK1, CDKN1A, NAGK, SMN1, RCC1, PIN1, ANXA7, KIAA0368, CUL3, EMILIN1, PAFAH1B1, KLC3, TUBB3, KCNA5, BICD2, DYNC1H1, DYNC1LI1, DCTN2, TRIM58, AMBRA1, BECN1, EP300, NDEL1, DCDC5, DYNC1LI2, WDR34, DISC1, DYNC1I2, RPL23, C15orf39, SAMD1, MGA |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 147_163 | 141 | 646 | DYNLT1 |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 147_163 | 104 | 609 | DYNLT1 |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 147_163 | 124 | 629 | DYNLT1 |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 147_163 | 124 | 629 | DYNLT1 |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000324972 | + | 4 | 17 | 2_123 | 141 | 646 | DCTN1 |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000359388 | + | 3 | 16 | 2_123 | 104 | 609 | DCTN1 |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000447467 | + | 4 | 17 | 2_123 | 124 | 629 | DCTN1 |
Tgene | DYNC1I1 | chr7:105029095 | chr7:95499195 | ENST00000457059 | + | 4 | 17 | 2_123 | 124 | 629 | DCTN1 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SRPK2_DYNC1I1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SRPK2_DYNC1I1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | DYNC1I1 | C0031117 | Peripheral Neuropathy | 1 | CTD_human |