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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 36038

FusionGeneSummary for SRPK2_DYNC1I1

check button Fusion gene summary
Fusion gene informationFusion gene name: SRPK2_DYNC1I1
Fusion gene ID: 36038
HgeneTgene
Gene symbol

SRPK2

DYNC1I1

Gene ID

6733

1780

Gene nameSRSF protein kinase 2dynein cytoplasmic 1 intermediate chain 1
SynonymsSFRSK2DNCI1|DNCIC1
Cytomap

7q22.3

7q21.3

Type of geneprotein-codingprotein-coding
DescriptionSRSF protein kinase 2SFRS protein kinase 2SR protein kinase 2SR-protein-specific kinase 2serine kinase SRPK2serine/arginine-rich protein-specific kinase 2serine/arginine-rich splicing factor kinase 2serine/threonine-protein kinase SRPK2cytoplasmic dynein 1 intermediate chain 1DH IC-1cytoplasmic dynein intermediate chain 1dynein intermediate chain 1, cytosolicdynein, cytoplasmic, intermediate polypeptide 1
Modification date2018052320180523
UniProtAcc

P78362

O14576

Ensembl transtripts involved in fusion geneENST00000393651, ENST00000357311, 
ENST00000489828, ENST00000493638, 
ENST00000447467, ENST00000324972, 
ENST00000537881, ENST00000437599, 
ENST00000359388, ENST00000413338, 
ENST00000457059, ENST00000497626, 
Fusion gene scores* DoF score11 X 6 X 10=6606 X 5 X 6=180
# samples 197
** MAII scorelog2(19/660*10)=-1.79646660591487
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(7/180*10)=-1.36257007938471
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SRPK2 [Title/Abstract] AND DYNC1I1 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSRPK2

GO:0000245

spliceosomal complex assembly

9472028

HgeneSRPK2

GO:0006468

protein phosphorylation

9472028

HgeneSRPK2

GO:0008284

positive regulation of cell proliferation

18559500

HgeneSRPK2

GO:0008380

RNA splicing

9472028

HgeneSRPK2

GO:0035556

intracellular signal transduction

9472028

HgeneSRPK2

GO:0045070

positive regulation of viral genome replication

20498328

HgeneSRPK2

GO:0045071

negative regulation of viral genome replication

12417631


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVLUADTCGA-NJ-A4YQ-01ASRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000393651ENST00000447467SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
In-frameENST00000393651ENST00000324972SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
In-frameENST00000393651ENST00000537881SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
In-frameENST00000393651ENST00000437599SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
In-frameENST00000393651ENST00000359388SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
5CDS-intronENST00000393651ENST00000413338SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
5CDS-intronENST00000393651ENST00000457059SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
5CDS-intronENST00000393651ENST00000497626SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000357311ENST00000447467SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000357311ENST00000324972SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000357311ENST00000537881SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000357311ENST00000437599SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000357311ENST00000359388SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000357311ENST00000413338SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000357311ENST00000457059SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000357311ENST00000497626SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000489828ENST00000447467SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000489828ENST00000324972SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000489828ENST00000537881SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000489828ENST00000437599SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000489828ENST00000359388SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000489828ENST00000413338SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000489828ENST00000457059SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000489828ENST00000497626SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000493638ENST00000447467SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000493638ENST00000324972SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000493638ENST00000537881SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000493638ENST00000437599SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-3CDSENST00000493638ENST00000359388SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000493638ENST00000413338SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000493638ENST00000457059SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+
intron-intronENST00000493638ENST00000497626SRPK2chr7

105029095

-DYNC1I1chr7

95499195

+

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FusionProtFeatures for SRPK2_DYNC1I1


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
SRPK2

P78362

DYNC1I1

O14576

Serine/arginine-rich protein-specific kinase whichspecifically phosphorylates its substrates at serine residueslocated in regions rich in arginine/serine dipeptides, known as RSdomains and is involved in the phosphorylation of SR splicingfactors and the regulation of splicing. Promotes neuronalapoptosis by up-regulating cyclin-D1 (CCND1) expression. This isdone by the phosphorylation of SRSF2, leading to the suppressionof p53/TP53 phosphorylation thereby relieving the repressiveeffect of p53/TP53 on cyclin-D1 (CCND1) expression. PhosphorylatesACIN1, and redistributes it from the nuclear speckles to thenucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in spliceosomal B complexformation via the phosphorylation of DDX23/PRP28. Can mediatehepatitis B virus (HBV) core protein phosphorylation. Plays anegative role in the regulation of HBV replication through amechanism not involving the phosphorylation of the core proteinbut by reducing the packaging efficiency of the pregenomic RNA(pgRNA) without affecting the formation of the viral coreparticles. {ECO:0000269|PubMed:12134018,ECO:0000269|PubMed:16122776, ECO:0000269|PubMed:18425142,ECO:0000269|PubMed:18559500, ECO:0000269|PubMed:19592491,ECO:0000269|PubMed:21056976, ECO:0000269|PubMed:21157427,ECO:0000269|PubMed:9472028}. Acts as one of several non-catalytic accessorycomponents of the cytoplasmic dynein 1 complex that are thought tobe involved in linking dynein to cargos and to adapter proteinsthat regulate dynein function. Cytoplasmic dynein 1 acts as amotor for the intracellular retrograde motility of vesicles andorganelles along microtubules. The intermediate chains mediate thebinding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. May play a role in mediating the interaction ofcytoplasmic dynein with membranous organelles and kinetochores.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417285_334141646RepeatNote=WD 1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417338_378141646RepeatNote=WD 2
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417387_428141646RepeatNote=WD 3
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417437_477141646RepeatNote=WD 4
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417482_527141646RepeatNote=WD 5
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417530_570141646RepeatNote=WD 6
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417576_615141646RepeatNote=WD 7
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316285_334104609RepeatNote=WD 1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316338_378104609RepeatNote=WD 2
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316387_428104609RepeatNote=WD 3
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316437_477104609RepeatNote=WD 4
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316482_527104609RepeatNote=WD 5
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316530_570104609RepeatNote=WD 6
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316576_615104609RepeatNote=WD 7
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417285_334124629RepeatNote=WD 1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417338_378124629RepeatNote=WD 2
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417387_428124629RepeatNote=WD 3
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417437_477124629RepeatNote=WD 4
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417482_527124629RepeatNote=WD 5
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417530_570124629RepeatNote=WD 6
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417576_615124629RepeatNote=WD 7
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417285_334124629RepeatNote=WD 1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417338_378124629RepeatNote=WD 2
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417387_428124629RepeatNote=WD 3
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417437_477124629RepeatNote=WD 4
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417482_527124629RepeatNote=WD 5
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417530_570124629RepeatNote=WD 6
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417576_615124629RepeatNote=WD 7

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSRPK2chr7:105029095chr7:95499195ENST00000357311-11581_684-58689DomainProtein kinase
HgeneSRPK2chr7:105029095chr7:95499195ENST00000393651-21681_68423700DomainProtein kinase
HgeneSRPK2chr7:105029095chr7:95499195ENST00000489828-11781_684-61689DomainProtein kinase
HgeneSRPK2chr7:105029095chr7:95499195ENST00000357311-11587_95-58689Nucleotide bindingATP
HgeneSRPK2chr7:105029095chr7:95499195ENST00000393651-21687_9523700Nucleotide bindingATP
HgeneSRPK2chr7:105029095chr7:95499195ENST00000489828-11787_95-61689Nucleotide bindingATP


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FusionGeneSequence for SRPK2_DYNC1I1


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000447467_chr7_95499195_+_528aa
MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV
KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ
YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH
THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE
VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000324972_chr7_95499195_+_528aa
MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV
KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ
YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH
THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE
VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000537881_chr7_95499195_+_522aa
MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV
KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ
YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH
THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE
VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000437599_chr7_95499195_+_528aa
MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV
KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ
YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH
THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE
VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000359388_chr7_95499195_+_528aa
MSSRKVLAIQARKRRPKREKHPKKRRLHKLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVESKVGQDSELENQDKKQEV
KEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQ
YPELMVASYNNNEDAPHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAH
THPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGE
VFEGHQGPVTGINCHMAVGPIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNLNNDTEV


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000447467_chr7_95499195_+_1584nt
ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG
GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG
TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG
AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA
CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG
GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG
TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT
AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT
GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC
ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG
AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA
ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG
GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA
TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC
ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT
CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG
GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000324972_chr7_95499195_+_1584nt
ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG
GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG
TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG
AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA
CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG
GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG
TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT
AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT
GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC
ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG
AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA
ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG
GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA
TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC
ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT
CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG
GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000537881_chr7_95499195_+_1566nt
ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG
GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG
TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG
AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA
CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG
GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG
TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT
AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT
GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC
ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG
AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA
ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG
GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA
TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC
ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT
CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG
GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGGGTCTTGCTATGTTGCCAGGCTGGTCTCAAAATTCCTGGACTCAAGCAATCCTCCTA

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000437599_chr7_95499195_+_1584nt
ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG
GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG
TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG
AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA
CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG
GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG
TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT
AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT
GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC
ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG
AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA
ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG
GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA
TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC
ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT
CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG
GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000359388_chr7_95499195_+_1584nt
ATGAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTG
GGCGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAG
TCTGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTG
AAGGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATA
CGGGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAG
GCTGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAG
TACCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTT
AAGAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGT
GGGACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACAC
ACGCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGG
AGCCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCA
ACGGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAG
GTCTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCA
TCATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTC
ATGTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTT
CCAACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCG
GAAGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATT


* Fusion transcript sequences (Full-length transcript).
>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000447467_chr7_95499195_+_2503nt
GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT
GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG
CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC
TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA
GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG
GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC
TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA
CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA
GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG
GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC
GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG
CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC
GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT
CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC
ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT
GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC
AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA
AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG
TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT
GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT
GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG
TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA
AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA
TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC
TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT
GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000324972_chr7_95499195_+_2491nt
GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT
GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG
CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC
TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA
GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG
GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC
TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA
CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA
GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG
GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC
GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG
CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC
GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT
CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC
ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT
GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC
AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA
AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG
TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT
GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT
GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG
TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA
AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA
TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC
TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT
GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000537881_chr7_95499195_+_1905nt
GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT
GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG
CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC
TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA
GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG
GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC
TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA
CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA
GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG
GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC
GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG
CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC
GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT
CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC
ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT
GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC
AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA
AGGCCGTATTTGGGTCTATGACGTTGGAGAGGGTCTTGCTATGTTGCCAGGCTGGTCTCAAAATTCCTGGACTCAAGCAATCCTCCTATG
TTGGCCTCCCAAAGTGCTGGGATTACAGACATGAGCCACTGTGCCCAGCTATGCCTGCTTGTTATATCAGCTACTGAGAGATGAGTACCA
AAATCTGGAAGTATAATTGTGGATATCTTTTAGTTCTTTCAGTTCTATCAGCTTTTGTTTTCTGTATCCAAAGCTTTGTTATTAGGTGCC
TACATATTGAGGATTTCATGTGTTTGCGATGAACTGACCCTTTTATCAATATGAAATGTTGCTGTTTATTCCTAGTAATAATCCTTTTTC

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000437599_chr7_95499195_+_2503nt
GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT
GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG
CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC
TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA
GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG
GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC
TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA
CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA
GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG
GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC
GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG
CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC
GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT
CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC
ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT
GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC
AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA
AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG
TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT
GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT
GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG
TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA
AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA
TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC
TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT
GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA

>In-frame_SRPK2_ENST00000393651_chr7_105029095_-_DYNC1I1_ENST00000359388_chr7_95499195_+_2503nt
GGCGGAGCGAGTGGAGGCTGCAGCCCAGCTCGTCTCGGCGCCCGCGTCGCCGTCGCGAAGCCCCCCGCCCCGCTTCCGCCGCGTCGGAAT
GAGCTCCCGGAAAGTGCTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAAAAAAAGAAGACTGCATAAACTGGG
CGTGTCAAAGGTCACCCAAGTGGATTTCCTGCCAAGGGAAGTAGTGTCCTACTCAAAGGAGACCCAGACTCCTCTTGCCACGCATCAGTC
TGAAGAGGATGAGGAAGATGAGGAAATGGTGGAATCTAAAGTTGGCCAGGACTCAGAACTGGAAAATCAGGACAAAAAACAGGAAGTGAA
GGAAGCCCCTCCAAGAGAGTTGACAGAGGAAGAAAAACAGCAGATCCTTCATTCAGAGGAATTTCTCATCTTTTTTGACCGGACAATACG
GGTAATTGAAAGAGCCCTGGCTGAAGATTCCGACATCTTTTTTGACTACAGCGGCCGAGAGTTAGAGGAAAAAGATGGGGATGTTCAGGC
TGGAGCCAATCTTTCTTTCAATCGTCAGTTCTATGATGAACATTGGTCCAAGCATCGAGTGGTCACTTGTATGGACTGGTCCCTCCAGTA
CCCTGAGCTGATGGTGGCTTCTTACAACAACAATGAAGATGCTCCCCATGAACCAGATGGAGTGGCCTTGGTTTGGAACATGAAGTTTAA
GAAAACCACACCAGAATACGTCTTCCACTGTCAGTCCTCTGTGATGTCGGTCTGCTTCGCCCGTTTCCATCCTAACTTGGTGGTTGGTGG
GACTTACTCGGGCCAGATTGTCCTCTGGGACAATCGCAGTCATCGAAGGACTCCAGTGCAGCGGACACCCTTATCAGCTGCTGCACACAC
GCATCCCGTGTACTGTGTAAATGTTGTTGGGACCCAGAATGCTCATAACCTCATCACTGTCTCCACTGATGGCAAAATGTGTTCCTGGAG
CCTGGACATGCTCTCAACTCCACAGGAGAGCATGGAGCTGGTGTACAATAAGTCCAAGCCTGTCGCTGTTACCGGAATGGCTTTCCCAAC
GGGAGACGTCAATAACTTCGTGGTTGGCAGTGAGGAAGGTACAGTCTACACGGCTTGTCGTCATGGAAGCAAAGCAGGTATTGGTGAGGT
CTTTGAAGGTCACCAAGGGCCAGTGACAGGAATTAACTGCCACATGGCAGTGGGCCCAATCGACTTTTCTCACCTGTTTGTCACATCATC
ATTTGACTGGACTGTCAAACTGTGGACCACCAAGCACAACAAGCCGCTCTACTCCTTTGAAGACAATGCAGACTATGTGTACGATGTCAT
GTGGTCCCCCGTGCATCCTGCGCTTTTTGCCTGCGTGGACGGGATGGGGCGCTTGGACCTCTGGAACCTCAACAATGACACCGAGGTTCC
AACAGCAAGTGTGGCCATTGAGGGGGCATCCGCCCTAAACCGTGTTCGTTGGGCCCAAGCTGGCAAAGAAGTTGCTGTTGGGGACTCGGA
AGGCCGTATTTGGGTCTATGACGTTGGAGAGCTTGCAGTTCCCCACAATGATGAATGGACCCGATTTGCCAGGACCCTTGTGGAAATTCG
TGCTAACAGAGCTGATAGCGAGGAGGAAGGCACTGTTGAGTTATCTGCCTAGTGGAAATGAGCCACCCCCACTGCAGCCCCCACCTTTGT
GTCCTAGAGCTCAGCGTCTGCAGTCAAGTCTCTTGTATTCGGTGTCCATTCAGTATCAGTATTGCTGTGATATTTTGGGTGCCATATTGT
GCCAGCTTTGCTCCAAGTATTCTAAATGTGTCCCATCATGCTTTCCACTGACCCAAAATTCACCACAGCATTTCTATCTTTATATTTCTG
TCTCAAAAATGAAGAGAAGGGGGTTATGGGTTAAGTTGCTGCCTTTTAACTACTTTGTAGCTGTATTTAATAGCTGGAAACCTCTGGTTA
AATTTGTGCTTACATGCACTCCTGGCATAGTCCTATTAAATCCATATGAAGCCAGATATGATTGGGTGCAGATGTGGTGTTCCTCATATT
ATGGTACAGGGCCAAAGACTTGAGACGTGGTGTTTTACATGGTGACTCACATTATGAATGGATTTACTAGAAGAACATTGCTGCTCCTTA
TTTATTGTAGTGTGCTGCATGGAACGTATTTATTTGAAAGCATTAAAATAAATGATCCTAGAGCATGTGCATAATGAGAGGACTGTATTC
TCTCTGCTGCTGTTGAGGTTATATTAAGTTCCACATAGCAATTACAGTATGCCAGTTCCACTGAAGACATGAAATCTTTAGAGGTTTCTT
GCAGTGAACGAAATGAATTTTAATGCCTATTATTTCTGGGTACTTTAACAATATTTCAAATATCATTGACCACTAATACTTCTCACTGAA


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FusionGenePPI for SRPK2_DYNC1I1


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.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
SRPK2U2AF2, RNPS1, SRSF1, SRSF3, SRSF2, SRSF5, SRSF6, SNRNP70, LUC7L3, SRPK1, VAV2, ARRB2, CUL3, APP, ESR1, BARD1, U2AF1, DDX46, RBM23, RBM39, PRPF38A, CTNNBL1, SNIP1, ACIN1, ARGLU1, SNRNP27, YTHDC1, DDX21, LUC7L, SRRM1, PABPC4, PRPF4B, SRRM2, PNN, SRPK2, SNRPD1, EIF4A3, HNRNPM, NOP2, DHX15, SNRPA, SNRPC, PCBP1, BCLAF1, RBBP6, PABPC1, C1orf35, DROSHA, LUC7L2, SRSF8, HNRNPC, RBM8A, MAGOH, SRSF7, TJP2, ALMS1, HNRNPCL1, CLASRP, DIDO1, DDX50, SNRPB, DGCR8, THRAP3, HNRNPH2, DDX39A, DDX39B, CPSF6, SON, NUDT21, NSG1, CHTOP, CDK13, FOXN3, EIF1AY, CHD2, TNFRSF10C, CASK, AURKA, CHUK, ARPC1B, UBD, NCK2, AHCYL1, TLE4, ERN1, DNAJC8, GABARAP, ZRANB2, TDP2, PAK4, ABL1, POLB, NELFE, ERCC3, MDK, PSMA3, DDX6, PTBP1, APEX1, GTF2E1, SRI, YWHAB, RPL22, MAGEB1, CBX5, CLK1, CLK3, CDK7, ADPRH, TPD52, RWDD2B, YPEL3, FGF12, WDR5, PPIA, RPL41, TRA2B, RNF4, MRPS6, PRKAA1, SRSF9, IFIT5, MPP3, TCOF1, TRA2A, DHX8, DRAP1, BRD3, SEC23B, HMGN3, ZRSR2, ENOX2, SNRNP35, C4orf46, C17orf85, TAF7L, FAM76B, ATAT1, ARL6IP4, AMMECR1L, CSAG1, RSRC2, NPM2, CAND1, LCA5, FAM90A1, MAPKAPK5, CCDC28A, ARHGAP12, CHERP, GPR114, DAW1, CLDN19, MARCH10, LRRN4CL, DBF4B, TNIP2, MCOLN3, EPS8L3, C16orf78, SDR42E1, TRIM41, SREK1, SRSF12, TTN, RTF1, RIT1, C18orf25, EVI5L, RPL39L, CCDC97, PELI1, NGLY1, RSRC1, EGLN2, UBE2E2, ALKBH3, YPEL2, RBM15, RIT2, VRK1, VIMP, CCM2, RSRP1, HIRIP3, LCE3D, NSRP1, GABARAPL1, KCNN2, CDC42EP4, EPB41L1, OCEL1, ZMAT4, EPB41L4A, PDE7B, NXT2, APOBEC3C, HOMER3, CBLN4, NSMCE4A, SLAIN2, NUP50, BAIAP2, DRG1, NOP16, PPIL1, HBS1L, MAB21L2, SUPT16H, SNURF, CACNG2, STON1, AES, CLK2, ZSCAN9, FXR2, LUZP4, BMI1, PPM1G, PRPF8, NTRK1, C5orf42, ACTB, ACTG1, ADAMTS18, AKAP13, ALDOA, ALPL, ANK3, ANKFY1, ANKRD35, AP1M1, KIAA1244, ARSG, ASL, BAG3, BAZ1A, BCL9L, BUD13, EFCAB12, ELP6, CADPS2, CALCOCO1, CAMSAP1, CARD11, CARHSP1, MTCL1, CCDC86, CCDC88B, CDK12, CEP170, CHD1L, CHEK2, CLASP1, CLASP2, CLCNKA, CLU, CPSF7, CRTC1, YBX3, DCAF10, DDX3X, DNAH6, DNAH9, DOCK3, ECT2, EED, EIF3A, EIF4B, EIF4G1, ELAVL3, ENSA, EPB41L4B, EPM2A, EPS8L1, ERBB3, ERC1, F5, AMER1, FAM179B, FAM43A, NXPE4, FBXO24, FCHO1, FGFR3, FIP1L1, FMNL1, GBF1, GCC2, GGCX, GHR, GLRA4, GLTSCR2, GNGT2, GSE1, GTPBP4, GXYLT2, HERC3, HIST1H2BK, HIVEP1, HMCN2, HMGA1, HMGN2, HMGXB4, HNRNPA1, HNRNPA3, HNRNPK, HTATSF1, IRS2, ISLR, JMJD1C, KANK2, KHDRBS1, KIF11, KRT78, LBR, LDHC, LINC00322, LMNA, LMNB1, LMO7, LRRC34, LRRC52, MACF1, MAP1S, MAP4, MAP7, MAP7D1, MAPKAPK3, MAPRE1, MAST2, MATR3, MDC1, MFSD10, MIB2, MIPOL1, ZAK, MMP23B, MYCBP2, MYLIP, MYO18B, MYO1E, MZT2B, NADK, NAGK, NCL, NGDN, NKAP, NOLC1, NSUN5P2, NTHL1, NXF1, OTOF, PALLD, PCF11, PDCL3, PHF6, PHLDB1, PKD1L2, PLEKHA5, PNMAL2, POLDIP3, PPHLN1, PPP1R13L, PRPF38B, PRRC2A, PRRC2B, PRRC2C, PSMD13, PTPN22, RABEP1, RASGRF1, RBM15B, RBM19, RBMX, RIPK3, RNF219, RPL13, RPL34, RPL37, RPLP2, RPS26, RRM2B, RRP1, RRP1B, RSL1D1, RXFP1, S100A4, SAFB, SART1, SBK1, SCAF1, SDK2, SEC16B, SERPING1, PNISR, SGPL1, SIPA1L3, SLC13A2, SLC17A6, SLFN5, SLTM, SMCHD1, SPDEF, SPEN, SRC, SRSF11, SRXN1, SYCP2, TCEANC2, TMEM57, TMPO, TMPRSS11A, TMSB10, TNFAIP8L2, TNS3, TOP1, TRIP12, TUBA1B, TXN, UBR4, UPF3B, USP36, USP39, VAC14, VSTM2L, WDR24, WDR70, XRCC5, YRDC, YTHDC2, ZC3H13, ZC3H18, ZCCHC17, ZDHHC5, ZFC3H1, ZFHX4, ZFP91, ZMYM4, ZNF140, ZNF234, ZNF529, ZNF592, ZNF593, ZNF616, FOXK2, FOXL2, FOXQ1, YBX1, AKT1, INO80B, TRIM25DYNC1I1DYNLL2, DYNLRB1, DYNLL1, DYNLT1, DYNLT3, STAU1, DNM2, NUDT21, CADM4, C2orf44, FAM110A, KAT7, FBP1, TAOK1, RUNDC3B, MCC, FAM83D, RAP1GAP, DCTN1, GRB7, TK1, CDKN1A, NAGK, SMN1, RCC1, PIN1, ANXA7, KIAA0368, CUL3, EMILIN1, PAFAH1B1, KLC3, TUBB3, KCNA5, BICD2, DYNC1H1, DYNC1LI1, DCTN2, TRIM58, AMBRA1, BECN1, EP300, NDEL1, DCDC5, DYNC1LI2, WDR34, DISC1, DYNC1I2, RPL23, C15orf39, SAMD1, MGA


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+417147_163141646DYNLT1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+316147_163104609DYNLT1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+417147_163124629DYNLT1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+417147_163124629DYNLT1


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000324972+4172_123141646DCTN1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000359388+3162_123104609DCTN1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000447467+4172_123124629DCTN1
TgeneDYNC1I1chr7:105029095chr7:95499195ENST00000457059+4172_123124629DCTN1


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for SRPK2_DYNC1I1


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SRPK2_DYNC1I1


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneDYNC1I1C0031117Peripheral Neuropathy1CTD_human