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Fusion gene ID: 35724 |
FusionGeneSummary for SPNS1_ZNF668 |
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Fusion gene information | Fusion gene name: SPNS1_ZNF668 | Fusion gene ID: 35724 | Hgene | Tgene | Gene symbol | SPNS1 | ZNF668 | Gene ID | 83985 | 79759 |
Gene name | sphingolipid transporter 1 (putative) | zinc finger protein 668 | |
Synonyms | HSpin1|LAT|PP2030|SPIN1|SPINL|nrs | - | |
Cytomap | 16p11.2 | 16p11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | protein spinster homolog 1SPNS sphingolipid transporter 1 (putative)spinster homolog 1spinster-like protein 1 | zinc finger protein 668 | |
Modification date | 20180522 | 20180519 | |
UniProtAcc | Q9H2V7 | Q96K58 | |
Ensembl transtripts involved in fusion gene | ENST00000565975, ENST00000311008, ENST00000323081, ENST00000334536, ENST00000352260, ENST00000561868, | ENST00000535577, ENST00000426488, ENST00000538906, ENST00000394983, ENST00000300849, ENST00000539836, ENST00000417110, ENST00000564456, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 2 X 2 X 2=8 |
# samples | 2 | 2 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: SPNS1 [Title/Abstract] AND ZNF668 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LGG | TCGA-HT-7689-01A | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000565975 | ENST00000535577 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000565975 | ENST00000426488 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000565975 | ENST00000538906 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000565975 | ENST00000394983 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000565975 | ENST00000300849 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000565975 | ENST00000539836 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000565975 | ENST00000417110 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000565975 | ENST00000564456 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000311008 | ENST00000535577 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000311008 | ENST00000426488 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000311008 | ENST00000538906 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000311008 | ENST00000394983 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000311008 | ENST00000300849 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000311008 | ENST00000539836 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000311008 | ENST00000417110 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000311008 | ENST00000564456 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000323081 | ENST00000535577 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000323081 | ENST00000426488 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000323081 | ENST00000538906 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000323081 | ENST00000394983 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000323081 | ENST00000300849 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000323081 | ENST00000539836 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000323081 | ENST00000417110 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000323081 | ENST00000564456 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000334536 | ENST00000535577 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000334536 | ENST00000426488 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000334536 | ENST00000538906 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000334536 | ENST00000394983 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000334536 | ENST00000300849 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000334536 | ENST00000539836 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000334536 | ENST00000417110 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000334536 | ENST00000564456 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000352260 | ENST00000535577 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000352260 | ENST00000426488 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000352260 | ENST00000538906 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000352260 | ENST00000394983 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000352260 | ENST00000300849 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-5UTR | ENST00000352260 | ENST00000539836 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000352260 | ENST00000417110 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
5CDS-intron | ENST00000352260 | ENST00000564456 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-5UTR | ENST00000561868 | ENST00000535577 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-5UTR | ENST00000561868 | ENST00000426488 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-5UTR | ENST00000561868 | ENST00000538906 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-5UTR | ENST00000561868 | ENST00000394983 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-5UTR | ENST00000561868 | ENST00000300849 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-5UTR | ENST00000561868 | ENST00000539836 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-intron | ENST00000561868 | ENST00000417110 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
intron-intron | ENST00000561868 | ENST00000564456 | SPNS1 | chr16 | 28989365 | + | ZNF668 | chr16 | 31075802 | - |
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FusionProtFeatures for SPNS1_ZNF668 |
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Hgene | Tgene |
SPNS1 | ZNF668 |
May be involved in transcriptional regulation.{ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for SPNS1_ZNF668 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for SPNS1_ZNF668 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SPNS1 | BCL2, BCL2L1, NLRX1, UNC93B1, CLN5, TES | ZNF668 | NPM1, TP53, MDM2, ELAVL1, HIST1H1A, NOL12, RPL14, RPL8, RPS8, PRR11, CLCN2, KIF22, LLGL2, RBM4, MATR3, KIF2C, SGTB, KIF21A, CEP170P1, WDR46, GPATCH4, HIST1H1T, RPL30, RPL7, DGCR8, RRP8, ZNF512, HIST1H1E, TRIM25 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SPNS1_ZNF668 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SPNS1_ZNF668 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | ZNF668 | C0014474 | Ependymoma | 1 | CTD_human |