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Fusion gene ID: 35500 |
FusionGeneSummary for SP3_SCRN3 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SP3_SCRN3 | Fusion gene ID: 35500 | Hgene | Tgene | Gene symbol | SP3 | SCRN3 | Gene ID | 6670 | 79634 |
| Gene name | Sp3 transcription factor | secernin 3 | |
| Synonyms | SPR2 | SES3 | |
| Cytomap | 2q31.1 | 2q31.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | transcription factor Sp3GC-binding transcription factor Sp3specificity protein 3 | secernin-3 | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q02447 | Q0VDG4 | |
| Ensembl transtripts involved in fusion gene | ENST00000455789, ENST00000310015, ENST00000418194, ENST00000483084, | ENST00000409673, ENST00000272732, ENST00000548921, | |
| Fusion gene scores | * DoF score | 10 X 5 X 8=400 | 4 X 3 X 4=48 |
| # samples | 11 | 4 | |
| ** MAII score | log2(11/400*10)=-1.86249647625006 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: SP3 [Title/Abstract] AND SCRN3 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | SP3 | GO:0006355 | regulation of transcription, DNA-templated | 12560508 |
| Hgene | SP3 | GO:0045893 | positive regulation of transcription, DNA-templated | 12771217 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | STAD | TCGA-BR-A4PD-01A | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000455789 | ENST00000409673 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| Frame-shift | ENST00000455789 | ENST00000272732 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| 5CDS-3UTR | ENST00000455789 | ENST00000548921 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| In-frame | ENST00000310015 | ENST00000409673 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| In-frame | ENST00000310015 | ENST00000272732 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| 5CDS-3UTR | ENST00000310015 | ENST00000548921 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| In-frame | ENST00000418194 | ENST00000409673 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| In-frame | ENST00000418194 | ENST00000272732 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| 5CDS-3UTR | ENST00000418194 | ENST00000548921 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| intron-3CDS | ENST00000483084 | ENST00000409673 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| intron-3CDS | ENST00000483084 | ENST00000272732 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
| intron-3UTR | ENST00000483084 | ENST00000548921 | SP3 | chr2 | 174819601 | - | SCRN3 | chr2 | 175287613 | + |
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FusionProtFeatures for SP3_SCRN3 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| SP3 | SCRN3 |
| Transcriptional factor that can act as an activator orrepressor depending on isoform and/or post-translationalmodifications. Binds to GT and GC boxes promoter elements.Competes with SP1 for the GC-box promoters. Weak activator oftranscription but can activate a number of genes involved indifferent processes such as cell-cycle regulation, hormone-induction and house-keeping. {ECO:0000269|PubMed:10391891,ECO:0000269|PubMed:11812829, ECO:0000269|PubMed:12419227,ECO:0000269|PubMed:12837748, ECO:0000269|PubMed:15247228,ECO:0000269|PubMed:15494207, ECO:0000269|PubMed:15554904,ECO:0000269|PubMed:16781829, ECO:0000269|PubMed:17548428,ECO:0000269|PubMed:18187045, ECO:0000269|PubMed:18617891,ECO:0000269|PubMed:9278495}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for SP3_SCRN3 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_SP3_ENST00000310015_chr2_174819601_-_SCRN3_ENST00000409673_chr2_175287613_+_720aa MTAPEKPVKQEEMAALDVDSGGGGGGGGGHGEYLQQQQQHGNGAVAAAAAAQDTQPSPLALLAATCSKIGPPSPGDDEEEAAAAAGAPAA AGATGDLASAQLGGAPNRWEVLSATPTTIKDEAGNLVQIPSAATSSGQYVLPLQNLQNQQIFSVAPGSDSSNGTVSSVQYQVIPQIQSAD GQQVQIGFTGSSDNGGINQESSQIQIIPGSNQTLLASGTPSANIQNLIPQTGQVQVQGVAIGGSSFPGQTQVVANVPLGLPGNITFVPIN SVDLDSLGLSGSSQTMTAGINADGHLINTGQAMDSSDNSERTGERVSPDINETNTDTDLFVPTSSSSQLPVTIDSTGILQQNTNSLTTSS GQVHSSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPTSQAQIVQGITPQTIHGVQASGQNISQQALQNLQLQLNPGTFLI QAQTVTPSGQVTWQTFQVQGVQNLQNLQIQNTAAQQITLTPVQTLTLGQVAAGGAFTSTPVSLSTGQLPNLQTVTVNSIDSAGIQLHPGE NADSPAGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTGTPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLV KKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSVKVSSX >In-frame_SP3_ENST00000310015_chr2_174819601_-_SCRN3_ENST00000272732_chr2_175287613_+_720aa MTAPEKPVKQEEMAALDVDSGGGGGGGGGHGEYLQQQQQHGNGAVAAAAAAQDTQPSPLALLAATCSKIGPPSPGDDEEEAAAAAGAPAA AGATGDLASAQLGGAPNRWEVLSATPTTIKDEAGNLVQIPSAATSSGQYVLPLQNLQNQQIFSVAPGSDSSNGTVSSVQYQVIPQIQSAD GQQVQIGFTGSSDNGGINQESSQIQIIPGSNQTLLASGTPSANIQNLIPQTGQVQVQGVAIGGSSFPGQTQVVANVPLGLPGNITFVPIN SVDLDSLGLSGSSQTMTAGINADGHLINTGQAMDSSDNSERTGERVSPDINETNTDTDLFVPTSSSSQLPVTIDSTGILQQNTNSLTTSS GQVHSSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPTSQAQIVQGITPQTIHGVQASGQNISQQALQNLQLQLNPGTFLI QAQTVTPSGQVTWQTFQVQGVQNLQNLQIQNTAAQQITLTPVQTLTLGQVAAGGAFTSTPVSLSTGQLPNLQTVTVNSIDSAGIQLHPGE NADSPAGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTGTPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLV KKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSVKVSSX >In-frame_SP3_ENST00000418194_chr2_174819601_-_SCRN3_ENST00000409673_chr2_175287613_+_652aa IGPPSPGDDEEEAAAAAGAPAAAGATGDLASAQLGGAPNRWEVLSATPTTIKDEAGNLVQIPSAATSSGQYVLPLQNLQNQQIFSVAPGS DSSNGTVSSVQYQVIPQIQSADGQQVQIGFTGSSDNGGINQESSQIQIIPGSNQTLLASGTPSANIQNLIPQTGQVQVQGVAIGGSSFPG QTQVVANVPLGLPGNITFVPINSVDLDSLGLSGSSQTMTAGINADGHLINTGQAMDSSDNSERTGERVSPDINETNTDTDLFVPTSSSSQ LPVTIDSTGILQQNTNSLTTSSGQVHSSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPTSQAQIVQGITPQTIHGVQASG QNISQQALQNLQLQLNPGTFLIQAQTVTPSGQVTWQTFQVQGVQNLQNLQIQNTAAQQITLTPVQTLTLGQVAAGGAFTSTPVSLSTGQL PNLQTVTVNSIDSAGIQLHPGENADSPAGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTGTPDPERSVFKPFI FVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLF >In-frame_SP3_ENST00000418194_chr2_174819601_-_SCRN3_ENST00000272732_chr2_175287613_+_652aa IGPPSPGDDEEEAAAAAGAPAAAGATGDLASAQLGGAPNRWEVLSATPTTIKDEAGNLVQIPSAATSSGQYVLPLQNLQNQQIFSVAPGS DSSNGTVSSVQYQVIPQIQSADGQQVQIGFTGSSDNGGINQESSQIQIIPGSNQTLLASGTPSANIQNLIPQTGQVQVQGVAIGGSSFPG QTQVVANVPLGLPGNITFVPINSVDLDSLGLSGSSQTMTAGINADGHLINTGQAMDSSDNSERTGERVSPDINETNTDTDLFVPTSSSSQ LPVTIDSTGILQQNTNSLTTSSGQVHSSDLQGNYIQSPVSEETQAQNIQVSTAQPVVQHLQLQESQQPTSQAQIVQGITPQTIHGVQASG QNISQQALQNLQLQLNPGTFLIQAQTVTPSGQVTWQTFQVQGVQNLQNLQIQNTAAQQITLTPVQTLTLGQVAAGGAFTSTPVSLSTGQL PNLQTVTVNSIDSAGIQLHPGENADSPAGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTGTPDPERSVFKPFI FVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLF |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_SP3_ENST00000310015_chr2_174819601_-_SCRN3_ENST00000409673_chr2_175287613_+_2160nt ATGACCGCTCCCGAAAAGCCCGTGAAACAAGAGGAAATGGCTGCCTTGGACGTGGATAGCGGCGGCGGCGGTGGCGGCGGCGGCGGCCAC GGCGAGTATCTGCAGCAGCAGCAACAGCACGGAAACGGTGCGGTGGCGGCGGCAGCGGCGGCCCAGGACACTCAGCCGTCACCGCTCGCT CTGCTGGCCGCTACCTGCAGCAAGATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCC GCCGGAGCGACAGGTGATTTGGCTTCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAA GATGAAGCTGGTAATCTAGTCCAGATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAA ATATTTTCCGTTGCACCAGGATCAGATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGAT GGTCAGCAGGTTCAAATTGGTTTCACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCT AATCAAACCTTACTTGCCTCTGGAACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCA ATTGGTGGTTCATCTTTTCCTGGTCAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAAT AGTGTCGATCTAGATTCTTTGGGACTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGA CAAGCTATGGATAGTTCAGACAATTCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTT GTGCCAACATCCTCTTCATCACAGTTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGT GGGCAGGTTCATTCTTCAGATCTTCAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACA GCACAGCCTGTTGTACAGCATCTACAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACA ATCCATGGTGTGCAAGCCAGTGGTCAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATT CAGGCACAGACAGTGACCCCTTCTGGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAG AATACTGCTGCCCAACAAATAACTTTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCA GTTAGTCTAAGCACTGGTCAGTTGCCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAG AATGCTGACAGTCCTGCAGGAAATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAA TTCCTGACCACTGCAAGCATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAG AGATCTGTTTTTAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTT AAAAAGAAATCACATTTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAA AAAGCCAAAATAATGTTGGACAACATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGAT GTGGAGAAAATTGTTAATCTCTTTCCTCAGTGTACAAAAGATGAAATTCAAATTTATCAGTCAAATTTATCAGTCAAAGTTAGTTCTTAG >In-frame_SP3_ENST00000310015_chr2_174819601_-_SCRN3_ENST00000272732_chr2_175287613_+_2160nt ATGACCGCTCCCGAAAAGCCCGTGAAACAAGAGGAAATGGCTGCCTTGGACGTGGATAGCGGCGGCGGCGGTGGCGGCGGCGGCGGCCAC GGCGAGTATCTGCAGCAGCAGCAACAGCACGGAAACGGTGCGGTGGCGGCGGCAGCGGCGGCCCAGGACACTCAGCCGTCACCGCTCGCT CTGCTGGCCGCTACCTGCAGCAAGATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCC GCCGGAGCGACAGGTGATTTGGCTTCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAA GATGAAGCTGGTAATCTAGTCCAGATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAA ATATTTTCCGTTGCACCAGGATCAGATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGAT GGTCAGCAGGTTCAAATTGGTTTCACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCT AATCAAACCTTACTTGCCTCTGGAACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCA ATTGGTGGTTCATCTTTTCCTGGTCAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAAT AGTGTCGATCTAGATTCTTTGGGACTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGA CAAGCTATGGATAGTTCAGACAATTCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTT GTGCCAACATCCTCTTCATCACAGTTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGT GGGCAGGTTCATTCTTCAGATCTTCAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACA GCACAGCCTGTTGTACAGCATCTACAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACA ATCCATGGTGTGCAAGCCAGTGGTCAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATT CAGGCACAGACAGTGACCCCTTCTGGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAG AATACTGCTGCCCAACAAATAACTTTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCA GTTAGTCTAAGCACTGGTCAGTTGCCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAG AATGCTGACAGTCCTGCAGGAAATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAA TTCCTGACCACTGCAAGCATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAG AGATCTGTTTTTAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTT AAAAAGAAATCACATTTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAA AAAGCCAAAATAATGTTGGACAACATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGAT GTGGAGAAAATTGTTAATCTCTTTCCTCAGTGTACAAAAGATGAAATTCAAATTTATCAGTCAAATTTATCAGTCAAAGTTAGTTCTTAG >In-frame_SP3_ENST00000418194_chr2_174819601_-_SCRN3_ENST00000409673_chr2_175287613_+_1956nt ATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCCGCCGGAGCGACAGGTGATTTGGCT TCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAAGATGAAGCTGGTAATCTAGTCCAG ATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAAATATTTTCCGTTGCACCAGGATCA GATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGATGGTCAGCAGGTTCAAATTGGTTTC ACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCTAATCAAACCTTACTTGCCTCTGGA ACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCAATTGGTGGTTCATCTTTTCCTGGT CAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAATAGTGTCGATCTAGATTCTTTGGGA CTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGACAAGCTATGGATAGTTCAGACAAT TCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTTGTGCCAACATCCTCTTCATCACAG TTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGTGGGCAGGTTCATTCTTCAGATCTT CAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACAGCACAGCCTGTTGTACAGCATCTA CAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACAATCCATGGTGTGCAAGCCAGTGGT CAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATTCAGGCACAGACAGTGACCCCTTCT GGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAGAATACTGCTGCCCAACAAATAACT TTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCAGTTAGTCTAAGCACTGGTCAGTTG CCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAGAATGCTGACAGTCCTGCAGGAAAT ATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACTGCAAGCATGGTT TCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAGAGATCTGTTTTTAAGCCTTTCATA TTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTTAAAAAGAAATCACATTTTAAGCCT GACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAAAAAGCCAAAATAATGTTGGACAAC ATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGATGTGGAGAAAATTGTTAATCTCTTT >In-frame_SP3_ENST00000418194_chr2_174819601_-_SCRN3_ENST00000272732_chr2_175287613_+_1956nt ATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCCGCCGGAGCGACAGGTGATTTGGCT TCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAAGATGAAGCTGGTAATCTAGTCCAG ATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAAATATTTTCCGTTGCACCAGGATCA GATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGATGGTCAGCAGGTTCAAATTGGTTTC ACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCTAATCAAACCTTACTTGCCTCTGGA ACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCAATTGGTGGTTCATCTTTTCCTGGT CAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAATAGTGTCGATCTAGATTCTTTGGGA CTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGACAAGCTATGGATAGTTCAGACAAT TCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTTGTGCCAACATCCTCTTCATCACAG TTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGTGGGCAGGTTCATTCTTCAGATCTT CAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACAGCACAGCCTGTTGTACAGCATCTA CAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACAATCCATGGTGTGCAAGCCAGTGGT CAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATTCAGGCACAGACAGTGACCCCTTCT GGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAGAATACTGCTGCCCAACAAATAACT TTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCAGTTAGTCTAAGCACTGGTCAGTTG CCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAGAATGCTGACAGTCCTGCAGGAAAT ATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACTGCAAGCATGGTT TCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAGAGATCTGTTTTTAAGCCTTTCATA TTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTTAAAAAGAAATCACATTTTAAGCCT GACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAAAAAGCCAAAATAATGTTGGACAAC ATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGATGTGGAGAAAATTGTTAATCTCTTT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_SP3_ENST00000310015_chr2_174819601_-_SCRN3_ENST00000409673_chr2_175287613_+_3213nt GGGACGAATTTCCTCCCCAGCTCAGCTCCCCTACAGCTTGGCTAGGCCTGCTCCGAGCGCCTGCAAGGTGGAGGAGGCCTGCGCCTCGGG CCTGGCAGCGGCAGCCGGCGAGGGAGGCGGGCACAGCGGGGTAACCGGCGAGCCGTAGCCGCTCTCGAAAACCTACGCTGCCACGGCCGC TCATTGTCTCTCCCCTTCCACCCGGGGGCAAACAGGAAGCGCGCCGCCTGGCAGACCGACGGACAGGCGCCTGGACCAATGAGCACAGCC GACAAAGAGCACGGCGGCGAATGAGAGCCAAGAAGAGGGGCGGGAGTTCCGGGCGGGCTGTCACCCTCTTCCCCCCTTTTGGGCTGGAGG CTCCACCTTTTGTGTTTCCCGCACAGTCAATCAAAATAGGAAAAAAAAATCCCCGGACCGCTCCGGCCGTGTCCGCCGCCGCTTCCCGCA TCCTCTCCCGCCGCCGCCGCCTTCGCTCCTCACCATGTGTAAGGCGGCGGGGAGCCCCGCCTGAGGTGCCCTAAACACACTATGACCGCT CCCGAAAAGCCCGTGAAACAAGAGGAAATGGCTGCCTTGGACGTGGATAGCGGCGGCGGCGGTGGCGGCGGCGGCGGCCACGGCGAGTAT CTGCAGCAGCAGCAACAGCACGGAAACGGTGCGGTGGCGGCGGCAGCGGCGGCCCAGGACACTCAGCCGTCACCGCTCGCTCTGCTGGCC GCTACCTGCAGCAAGATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCCGCCGGAGCG ACAGGTGATTTGGCTTCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAAGATGAAGCT GGTAATCTAGTCCAGATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAAATATTTTCC GTTGCACCAGGATCAGATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGATGGTCAGCAG GTTCAAATTGGTTTCACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCTAATCAAACC TTACTTGCCTCTGGAACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCAATTGGTGGT TCATCTTTTCCTGGTCAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAATAGTGTCGAT CTAGATTCTTTGGGACTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGACAAGCTATG GATAGTTCAGACAATTCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTTGTGCCAACA TCCTCTTCATCACAGTTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGTGGGCAGGTT CATTCTTCAGATCTTCAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACAGCACAGCCT GTTGTACAGCATCTACAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACAATCCATGGT GTGCAAGCCAGTGGTCAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATTCAGGCACAG ACAGTGACCCCTTCTGGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAGAATACTGCT GCCCAACAAATAACTTTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCAGTTAGTCTA AGCACTGGTCAGTTGCCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAGAATGCTGAC AGTCCTGCAGGAAATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACC ACTGCAAGCATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAGAGATCTGTT TTTAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTTAAAAAGAAA TCACATTTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAAAAAGCCAAA ATAATGTTGGACAACATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGATGTGGAGAAA ATTGTTAATCTCTTTCCTCAGTGTACAAAAGATGAAATTCAAATTTATCAGTCAAATTTATCAGTCAAAGTTAGTTCTTAGTGATCATAT GGTCAGCTAATATTAGTTCTTAGTGATCAGTGGTCAGTAATCTTCAAAGTCAGAATCTATCACCTTGGTAAATTATATAAACCTAACTTG AGCAGATCTGATTATTCTTGGATAGTATTCAAGTGGTATCTTGACTATTAAACTACGTATAGTGTTGCTGAAATAGAAAGAAAACAGCAT TGGAATTGGATTCATGTATCGTGGGATACAGGTGTTATTTCAGGTGATGTACTTGCATTATTTTCTTTAGCCATAGTAACTTTTTGTCAC AATAACTAAGTATTCAATTATATATAAAGAGTGAAACATTAAAATGACGCATGGATTTATATTTATTATAATTATGTAGTACCCTCAAAT CATTTTGTCAGTTACATCAAGAAAGCAGATTTTTCTTTAGTCATGAAAAATATCTCAAGTGGTAAGTTGTTTGTGCTTTAGGCAAACATT >In-frame_SP3_ENST00000310015_chr2_174819601_-_SCRN3_ENST00000272732_chr2_175287613_+_4371nt GGGACGAATTTCCTCCCCAGCTCAGCTCCCCTACAGCTTGGCTAGGCCTGCTCCGAGCGCCTGCAAGGTGGAGGAGGCCTGCGCCTCGGG CCTGGCAGCGGCAGCCGGCGAGGGAGGCGGGCACAGCGGGGTAACCGGCGAGCCGTAGCCGCTCTCGAAAACCTACGCTGCCACGGCCGC TCATTGTCTCTCCCCTTCCACCCGGGGGCAAACAGGAAGCGCGCCGCCTGGCAGACCGACGGACAGGCGCCTGGACCAATGAGCACAGCC GACAAAGAGCACGGCGGCGAATGAGAGCCAAGAAGAGGGGCGGGAGTTCCGGGCGGGCTGTCACCCTCTTCCCCCCTTTTGGGCTGGAGG CTCCACCTTTTGTGTTTCCCGCACAGTCAATCAAAATAGGAAAAAAAAATCCCCGGACCGCTCCGGCCGTGTCCGCCGCCGCTTCCCGCA TCCTCTCCCGCCGCCGCCGCCTTCGCTCCTCACCATGTGTAAGGCGGCGGGGAGCCCCGCCTGAGGTGCCCTAAACACACTATGACCGCT CCCGAAAAGCCCGTGAAACAAGAGGAAATGGCTGCCTTGGACGTGGATAGCGGCGGCGGCGGTGGCGGCGGCGGCGGCCACGGCGAGTAT CTGCAGCAGCAGCAACAGCACGGAAACGGTGCGGTGGCGGCGGCAGCGGCGGCCCAGGACACTCAGCCGTCACCGCTCGCTCTGCTGGCC GCTACCTGCAGCAAGATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCCGCCGGAGCG ACAGGTGATTTGGCTTCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAAGATGAAGCT GGTAATCTAGTCCAGATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAAATATTTTCC GTTGCACCAGGATCAGATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGATGGTCAGCAG GTTCAAATTGGTTTCACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCTAATCAAACC TTACTTGCCTCTGGAACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCAATTGGTGGT TCATCTTTTCCTGGTCAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAATAGTGTCGAT CTAGATTCTTTGGGACTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGACAAGCTATG GATAGTTCAGACAATTCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTTGTGCCAACA TCCTCTTCATCACAGTTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGTGGGCAGGTT CATTCTTCAGATCTTCAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACAGCACAGCCT GTTGTACAGCATCTACAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACAATCCATGGT GTGCAAGCCAGTGGTCAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATTCAGGCACAG ACAGTGACCCCTTCTGGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAGAATACTGCT GCCCAACAAATAACTTTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCAGTTAGTCTA AGCACTGGTCAGTTGCCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAGAATGCTGAC AGTCCTGCAGGAAATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACC ACTGCAAGCATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAGAGATCTGTT TTTAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTTAAAAAGAAA TCACATTTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAAAAAGCCAAA ATAATGTTGGACAACATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGATGTGGAGAAA ATTGTTAATCTCTTTCCTCAGTGTACAAAAGATGAAATTCAAATTTATCAGTCAAATTTATCAGTCAAAGTTAGTTCTTAGTGATCATAT GGTCAGCTAATATTAGTTCTTAGTGATCAGTGGTCAGTAATCTTCAAAGTCAGAATCTATCACCTTGGTAAATTATATAAACCTAACTTG AGCAGATCTGATTATTCTTGGATAGTATTCAAGTGGTATCTTGACTATTAAACTACGTATAGTGTTGCTGAAATAGAAAGAAAACAGCAT TGGAATTGGATTCATGTATCGTGGGATACAGGTGTTATTTCAGGTGATGTACTTGCATTATTTTCTTTAGCCATAGTAACTTTTTGTCAC AATAACTAAGTATTCAATTATATATAAAGAGTGAAACATTAAAATGACGCATGGATTTATATTTATTATAATTATGTAGTACCCTCAAAT CATTTTGTCAGTTACATCAAGAAAGCAGATTTTTCTTTAGTCATGAAAAATATCTCAAGTGGTAAGTTGTTTGTGCTTTAGGCAAACATT AACCAGCTCTAACAAGAAAAATGTCTAGATTTACACATTGTCAATACAGTATATTAGTTCTGCAAATGCACTTTTGTTAAACTCAAACAT GCTCTTTGTCAAGACTTGGCTAACCAGTGAGCTTGTAGCTCTGATTATCTAGCATTTTTAGGGTCATTCTCCTTAATAGGCTTTTATGTT AATAAGATATATTTTTAGAAGAGCTTGTTTGGGAGATTAGAGAATAAGATAAAAGAACCAAAACCTTAGGATATACTGTTTCTGGGTCTG AAATCTCTCTCATTGTTTACTTCTGTTCACTCAGTGAAAACAGAAACAAGAATGAGGTAGTGGCAATGAAATAGAATTATTAGTATATTA TGAACATTATAACATTTTGAACACTATAATGCATTATATATTATGAACTTTTATGAACTTTATACATGAGTAATAGCTTCCTAAAGTTTA TAAAACATTGTTTAGGTTACATAAAGATTACCAAGTAAGACTCAAAATTGCAAATATAAACAAAAGAAAAATCCAACTGAAAATAACACT AAGTATTTTTGAGTTCCTAGAATGTCCATTTTGGTATTTGGTTACATTATCATATTTACTAGTCACTATCAGCACAATTAGGTTAATAAA GAAGTGGGTCATTATATTCAAAGAGTGCTCAGGAAGTTATGTGTTCAAAGTTCTCTCATAAATACCATCGTCTGCCTGATACTGCTCTTG TCTAATAGAGGGTTGACATTACAAAAGAAAAGATGTCTGACTCAAGAACTCAGTTGATTCTGTTTGCCTTAAGTTTGGTTCAGTGATAGG CTGTCTTCTAACCCCTATACTCCTCTTCTCTCCTTTAATAGATGAGGAAACTAAGGGCAAACAGTTCGTTACACTTACGGGAATCTTATT TCCCTCTCTAGGGGCAGCATGTTTTCACCTTCTCCTTTGCTGCCACCTTGGCCTAAACTAGCACCGTCTTTTAGCTAGACCATTGCGTTA ACTGTTCTCCTACACCCATTTTTGTTCTTTATTTCCACCCACATGAGTCACTGCAGCCAATCTATTACAAATTTAAATCTGATTATGAAT TCCCCTCCTAAAACTCTTTTTTAAAAGAGACTTTATTTTTTGGAGCAGTTTTAGGTTCACAGCAAAATTGAACAGAAAGTACAGAGTTCC >In-frame_SP3_ENST00000418194_chr2_174819601_-_SCRN3_ENST00000409673_chr2_175287613_+_2862nt CCTCGCCCGCCTGCCGCCTTTTTGTGCGCGTGTGAGTGTGGGCCCCAGCGTGCCCTCCCGGGGGTGGGTTCCGGGCGGAAGGCGGAGGCC CGGCGCGCAGCCCGCCGCCCGCCTGCCCGCGGACCGGGGAGCCGGGGTGCTTGGAGCGGGGGACGCCAGGCGTGGGCTGGCGGCGGGACC AGGAGGAGGAGGAGGAGGAGGAGGAGAGCGCGGGCTGGCGCTTGCCCGGGCGCAGTCGGCGGGGACCGAGTCGTACTTCCTGTGCGAAAG GCGGCCCGACCCTAACCGCCACCCCCTCCCCCTGTCTCCCTCTCTGAACCCGCCCATTGGGGGTAGGACACTCAGCCGTCACCGCTCGCT CTGCTGGCCGCTACCTGCAGCAAGATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCC GCCGGAGCGACAGGTGATTTGGCTTCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAA GATGAAGCTGGTAATCTAGTCCAGATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAA ATATTTTCCGTTGCACCAGGATCAGATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGAT GGTCAGCAGGTTCAAATTGGTTTCACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCT AATCAAACCTTACTTGCCTCTGGAACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCA ATTGGTGGTTCATCTTTTCCTGGTCAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAAT AGTGTCGATCTAGATTCTTTGGGACTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGA CAAGCTATGGATAGTTCAGACAATTCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTT GTGCCAACATCCTCTTCATCACAGTTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGT GGGCAGGTTCATTCTTCAGATCTTCAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACA GCACAGCCTGTTGTACAGCATCTACAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACA ATCCATGGTGTGCAAGCCAGTGGTCAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATT CAGGCACAGACAGTGACCCCTTCTGGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAG AATACTGCTGCCCAACAAATAACTTTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCA GTTAGTCTAAGCACTGGTCAGTTGCCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAG AATGCTGACAGTCCTGCAGGAAATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAA TTCCTGACCACTGCAAGCATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAG AGATCTGTTTTTAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTT AAAAAGAAATCACATTTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAA AAAGCCAAAATAATGTTGGACAACATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGAT GTGGAGAAAATTGTTAATCTCTTTCCTCAGTGTACAAAAGATGAAATTCAAATTTATCAGTCAAATTTATCAGTCAAAGTTAGTTCTTAG TGATCATATGGTCAGCTAATATTAGTTCTTAGTGATCAGTGGTCAGTAATCTTCAAAGTCAGAATCTATCACCTTGGTAAATTATATAAA CCTAACTTGAGCAGATCTGATTATTCTTGGATAGTATTCAAGTGGTATCTTGACTATTAAACTACGTATAGTGTTGCTGAAATAGAAAGA AAACAGCATTGGAATTGGATTCATGTATCGTGGGATACAGGTGTTATTTCAGGTGATGTACTTGCATTATTTTCTTTAGCCATAGTAACT TTTTGTCACAATAACTAAGTATTCAATTATATATAAAGAGTGAAACATTAAAATGACGCATGGATTTATATTTATTATAATTATGTAGTA CCCTCAAATCATTTTGTCAGTTACATCAAGAAAGCAGATTTTTCTTTAGTCATGAAAAATATCTCAAGTGGTAAGTTGTTTGTGCTTTAG >In-frame_SP3_ENST00000418194_chr2_174819601_-_SCRN3_ENST00000272732_chr2_175287613_+_4020nt CCTCGCCCGCCTGCCGCCTTTTTGTGCGCGTGTGAGTGTGGGCCCCAGCGTGCCCTCCCGGGGGTGGGTTCCGGGCGGAAGGCGGAGGCC CGGCGCGCAGCCCGCCGCCCGCCTGCCCGCGGACCGGGGAGCCGGGGTGCTTGGAGCGGGGGACGCCAGGCGTGGGCTGGCGGCGGGACC AGGAGGAGGAGGAGGAGGAGGAGGAGAGCGCGGGCTGGCGCTTGCCCGGGCGCAGTCGGCGGGGACCGAGTCGTACTTCCTGTGCGAAAG GCGGCCCGACCCTAACCGCCACCCCCTCCCCCTGTCTCCCTCTCTGAACCCGCCCATTGGGGGTAGGACACTCAGCCGTCACCGCTCGCT CTGCTGGCCGCTACCTGCAGCAAGATAGGGCCGCCATCGCCGGGCGACGACGAGGAGGAGGCGGCCGCCGCAGCCGGGGCCCCCGCCGCC GCCGGAGCGACAGGTGATTTGGCTTCTGCACAGTTAGGAGGAGCACCAAACCGATGGGAGGTTTTGTCAGCCACACCTACAACTATAAAA GATGAAGCTGGTAATCTAGTCCAGATTCCAAGTGCTGCTACTTCAAGTGGGCAGTATGTTCTTCCCCTTCAGAATTTGCAGAATCAACAA ATATTTTCCGTTGCACCAGGATCAGATTCATCAAATGGTACAGTGTCCAGTGTTCAATATCAAGTGATACCACAGATCCAGTCAGCAGAT GGTCAGCAGGTTCAAATTGGTTTCACAGGCTCTTCAGATAATGGGGGTATAAATCAAGAAAGCAGTCAAATTCAGATCATTCCTGGCTCT AATCAAACCTTACTTGCCTCTGGAACACCTTCTGCTAACATCCAGAATCTCATACCACAGACTGGTCAAGTCCAGGTTCAGGGAGTTGCA ATTGGTGGTTCATCTTTTCCTGGTCAAACCCAAGTAGTTGCTAATGTGCCTCTTGGTCTGCCAGGAAATATTACGTTTGTACCAATCAAT AGTGTCGATCTAGATTCTTTGGGACTCTCGGGCAGTTCTCAGACAATGACTGCAGGCATTAATGCCGACGGACATTTGATAAACACAGGA CAAGCTATGGATAGTTCAGACAATTCAGAAAGGACTGGTGAGCGGGTTTCTCCTGATATTAATGAAACTAATACTGATACAGATTTATTT GTGCCAACATCCTCTTCATCACAGTTGCCTGTTACGATAGATAGTACAGGTATATTACAACAAAACACAAATAGCTTGACTACATCTAGT GGGCAGGTTCATTCTTCAGATCTTCAGGGAAATTATATCCAGTCGCCTGTTTCTGAAGAGACACAGGCACAGAATATTCAGGTTTCTACA GCACAGCCTGTTGTACAGCATCTACAACTTCAAGAGTCTCAGCAGCCAACCAGTCAAGCCCAAATTGTGCAAGGTATTACACCACAGACA ATCCATGGTGTGCAAGCCAGTGGTCAAAATATATCACAACAGGCTTTGCAAAATCTTCAGTTGCAGCTGAATCCTGGAACCTTTTTAATT CAGGCACAGACAGTGACCCCTTCTGGACAGGTAACTTGGCAAACGTTTCAAGTACAAGGGGTCCAGAACTTGCAGAATTTGCAAATACAG AATACTGCTGCCCAACAAATAACTTTGACGCCTGTTCAAACCCTCACACTTGGTCAAGTTGCGGCAGGTGGAGCCTTCACTTCAACTCCA GTTAGTCTAAGCACTGGTCAGTTGCCAAATCTACAAACAGTTACAGTGAACTCTATAGATTCTGCTGGTATACAGCTACATCCAGGAGAG AATGCTGACAGTCCTGCAGGAAATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAA TTCCTGACCACTGCAAGCATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAG AGATCTGTTTTTAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTT AAAAAGAAATCACATTTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAA AAAGCCAAAATAATGTTGGACAACATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGAT GTGGAGAAAATTGTTAATCTCTTTCCTCAGTGTACAAAAGATGAAATTCAAATTTATCAGTCAAATTTATCAGTCAAAGTTAGTTCTTAG TGATCATATGGTCAGCTAATATTAGTTCTTAGTGATCAGTGGTCAGTAATCTTCAAAGTCAGAATCTATCACCTTGGTAAATTATATAAA CCTAACTTGAGCAGATCTGATTATTCTTGGATAGTATTCAAGTGGTATCTTGACTATTAAACTACGTATAGTGTTGCTGAAATAGAAAGA AAACAGCATTGGAATTGGATTCATGTATCGTGGGATACAGGTGTTATTTCAGGTGATGTACTTGCATTATTTTCTTTAGCCATAGTAACT TTTTGTCACAATAACTAAGTATTCAATTATATATAAAGAGTGAAACATTAAAATGACGCATGGATTTATATTTATTATAATTATGTAGTA CCCTCAAATCATTTTGTCAGTTACATCAAGAAAGCAGATTTTTCTTTAGTCATGAAAAATATCTCAAGTGGTAAGTTGTTTGTGCTTTAG GCAAACATTAACCAGCTCTAACAAGAAAAATGTCTAGATTTACACATTGTCAATACAGTATATTAGTTCTGCAAATGCACTTTTGTTAAA CTCAAACATGCTCTTTGTCAAGACTTGGCTAACCAGTGAGCTTGTAGCTCTGATTATCTAGCATTTTTAGGGTCATTCTCCTTAATAGGC TTTTATGTTAATAAGATATATTTTTAGAAGAGCTTGTTTGGGAGATTAGAGAATAAGATAAAAGAACCAAAACCTTAGGATATACTGTTT CTGGGTCTGAAATCTCTCTCATTGTTTACTTCTGTTCACTCAGTGAAAACAGAAACAAGAATGAGGTAGTGGCAATGAAATAGAATTATT AGTATATTATGAACATTATAACATTTTGAACACTATAATGCATTATATATTATGAACTTTTATGAACTTTATACATGAGTAATAGCTTCC TAAAGTTTATAAAACATTGTTTAGGTTACATAAAGATTACCAAGTAAGACTCAAAATTGCAAATATAAACAAAAGAAAAATCCAACTGAA AATAACACTAAGTATTTTTGAGTTCCTAGAATGTCCATTTTGGTATTTGGTTACATTATCATATTTACTAGTCACTATCAGCACAATTAG GTTAATAAAGAAGTGGGTCATTATATTCAAAGAGTGCTCAGGAAGTTATGTGTTCAAAGTTCTCTCATAAATACCATCGTCTGCCTGATA CTGCTCTTGTCTAATAGAGGGTTGACATTACAAAAGAAAAGATGTCTGACTCAAGAACTCAGTTGATTCTGTTTGCCTTAAGTTTGGTTC AGTGATAGGCTGTCTTCTAACCCCTATACTCCTCTTCTCTCCTTTAATAGATGAGGAAACTAAGGGCAAACAGTTCGTTACACTTACGGG AATCTTATTTCCCTCTCTAGGGGCAGCATGTTTTCACCTTCTCCTTTGCTGCCACCTTGGCCTAAACTAGCACCGTCTTTTAGCTAGACC ATTGCGTTAACTGTTCTCCTACACCCATTTTTGTTCTTTATTTCCACCCACATGAGTCACTGCAGCCAATCTATTACAAATTTAAATCTG ATTATGAATTCCCCTCCTAAAACTCTTTTTTAAAAGAGACTTTATTTTTTGGAGCAGTTTTAGGTTCACAGCAAAATTGAACAGAAAGTA |
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FusionGenePPI for SP3_SCRN3 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| SP3 | STK19, HDAC2, RBBP4, HDAC1, PIAS1, SP4, E2F1, GABPA, SFPQ, DNMT1, SP1, CREBBP, EP300, CEBPB, ESR1, NKX3-1, TP53, CRX, ZBTB7B, MECP2, RELA, YY1, TFAP4, HLTF, GCH1, PPP1CC, PPP2R4, SGCZ, ADAMTS12, ITLN1, B4GALT4, TMEM25, PTPRK, TSHB, DEAF1, SUB1 | SCRN3 | EPS8, MAGOH, SMYD1, RCVRN, SPATA20 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SP3_SCRN3 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SP3_SCRN3 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | SP3 | C0033975 | Psychotic Disorders | 1 | PSYGENET |
| Hgene | SP3 | C0036341 | Schizophrenia | 1 | PSYGENET |
| Hgene | SP3 | C0349204 | Nonorganic psychosis | 1 | PSYGENET |
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