|
Fusion gene ID: 3542 |
FusionGeneSummary for ATRX_ABCB7 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ATRX_ABCB7 | Fusion gene ID: 3542 | Hgene | Tgene | Gene symbol | ATRX | ABCB7 | Gene ID | 546 | 22 |
Gene name | ATRX, chromatin remodeler | ATP binding cassette subfamily B member 7 | |
Synonyms | JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX | ABC7|ASAT|Atm1p|EST140535 | |
Cytomap | Xq21.1 | Xq13.3 | |
Type of gene | protein-coding | protein-coding | |
Description | transcriptional regulator ATRXATP-dependent helicase ATRXX-linked helicase IIX-linked nuclear proteinalpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) | ATP-binding cassette sub-family B member 7, mitochondrialABC transporter 7 proteinATP-binding cassette transporter 7ATP-binding cassette, sub-family B (MDR/TAP), member 7 | |
Modification date | 20180519 | 20180525 | |
UniProtAcc | P46100 | O75027 | |
Ensembl transtripts involved in fusion gene | ENST00000373344, ENST00000395603, ENST00000480283, ENST00000373341, | ENST00000253577, ENST00000339447, ENST00000373394, ENST00000534570, | |
Fusion gene scores | * DoF score | 9 X 4 X 6=216 | 3 X 4 X 3=36 |
# samples | 9 | 3 | |
** MAII score | log2(9/216*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/36*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ATRX [Title/Abstract] AND ABCB7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ATRX | GO:0006334 | nucleosome assembly | 20651253 |
Hgene | ATRX | GO:0006338 | chromatin remodeling | 20651253 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SARC | TCGA-HB-A3YV-01A | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
TCGA | LD | SARC | TCGA-HB-A3YV-01A | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000373344 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000373344 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000373344 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5CDS-intron | ENST00000373344 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000395603 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000395603 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
In-frame | ENST00000395603 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5CDS-intron | ENST00000395603 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-3CDS | ENST00000480283 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-3CDS | ENST00000480283 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-3CDS | ENST00000480283 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
5UTR-intron | ENST00000480283 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373341 | ENST00000253577 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373341 | ENST00000339447 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373341 | ENST00000373394 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-intron | ENST00000373341 | ENST00000534570 | ATRX | chrX | 77041468 | - | ABCB7 | chrX | 74334669 | - |
intron-3CDS | ENST00000373344 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373344 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373344 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373344 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-3CDS | ENST00000395603 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000395603 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000395603 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000395603 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-3CDS | ENST00000480283 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000480283 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000480283 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000480283 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-3CDS | ENST00000373341 | ENST00000253577 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373341 | ENST00000339447 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373341 | ENST00000373394 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
intron-intron | ENST00000373341 | ENST00000534570 | ATRX | chrX | 77041332 | - | ABCB7 | chrX | 74318897 | - |
Top |
FusionProtFeatures for ATRX_ABCB7 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ATRX | ABCB7 |
Could be involved in the transport of heme from themitochondria to the cytosol. Plays a central role in thematuration of cytosolic iron-sulfur (Fe/S) cluster-containingproteins. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 140_436 | 56 | 754 | Domain | ABC transmembrane type-1 |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 472_706 | 56 | 754 | Domain | ABC transporter |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 140_436 | 56 | 753 | Domain | ABC transmembrane type-1 |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 472_706 | 56 | 753 | Domain | ABC transporter |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 505_516 | 56 | 754 | Nucleotide binding | ATP |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 505_516 | 56 | 753 | Nucleotide binding | ATP |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 141_161 | 56 | 754 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 186_206 | 56 | 754 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 260_280 | 56 | 754 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 291_311 | 56 | 754 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 383_403 | 56 | 754 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000253577 | - | 0 | 16 | 410_430 | 56 | 754 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 141_161 | 56 | 753 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 186_206 | 56 | 753 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 260_280 | 56 | 753 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 291_311 | 56 | 753 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 383_403 | 56 | 753 | Transmembrane | Helical |
Tgene | >ABCB7 | chrX:77041468 | chrX:74334669 | ENST00000373394 | - | 0 | 16 | 410_430 | 56 | 753 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1151_1156 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1166_1169 | 6 | 2493 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1202_1206 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1259_1266 | 6 | 2493 | Compositional bias | Note=Poly-Asp |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1443_1466 | 6 | 2493 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1499_1502 | 6 | 2493 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1929_1939 | 6 | 2493 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1941_1948 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2222_2225 | 6 | 2493 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2262_2265 | 6 | 2493 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2420_2425 | 6 | 2493 | Compositional bias | Note=Poly-Gln |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 745_750 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1151_1156 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1166_1169 | 6 | 2455 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1202_1206 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1259_1266 | 6 | 2455 | Compositional bias | Note=Poly-Asp |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1443_1466 | 6 | 2455 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1499_1502 | 6 | 2455 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1929_1939 | 6 | 2455 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1941_1948 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2222_2225 | 6 | 2455 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2262_2265 | 6 | 2455 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2420_2425 | 6 | 2455 | Compositional bias | Note=Poly-Gln |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 745_750 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1581_1768 | 6 | 2493 | Domain | Helicase ATP-binding |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 159_296 | 6 | 2493 | Domain | ADD |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2025_2205 | 6 | 2493 | Domain | Helicase C-terminal |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1581_1768 | 6 | 2455 | Domain | Helicase ATP-binding |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 159_296 | 6 | 2455 | Domain | ADD |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2025_2205 | 6 | 2455 | Domain | Helicase C-terminal |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1719_1722 | 6 | 2493 | Motif | Note=DEGH box |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 581_594 | 6 | 2493 | Motif | Note=PxVxL motif |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1719_1722 | 6 | 2455 | Motif | Note=DEGH box |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 581_594 | 6 | 2455 | Motif | Note=PxVxL motif |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1594_1601 | 6 | 2493 | Nucleotide binding | ATP |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1594_1601 | 6 | 2455 | Nucleotide binding | ATP |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 170_206 | 6 | 2493 | Zinc finger | GATA-type%3B atypical |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 217_272 | 6 | 2493 | Zinc finger | PHD-type%3B atypical |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 170_206 | 6 | 2455 | Zinc finger | GATA-type%3B atypical |
Hgene | >ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 217_272 | 6 | 2455 | Zinc finger | PHD-type%3B atypical |
Top |
FusionGeneSequence for ATRX_ABCB7 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000253577_chrX_74334669_-_704aa MTAEPMSRFQSHXKVSHGRDWEKAIQDSSXMLQRLSRYGHXXKRGHVGMVMQEEDSTQTQKKGXKMLILGKSXKQCFLMCGPKTGQIYEL ELPFRWDFWVVQRPXILWFPSCLNMLXTASTRCRETCXTXVMHQIQLQPWQQQFXLAMVYQELELLFLTKFEMQYLARXPRIQSEEXPKM SFSIFTTWIWVFTXADRRELYLRLLTEEQGVSVLSXVLWYLIFFPSCLKXCLSVVFCITNAVPSLLWXPLEHLVHTQHSQLQSHGGELDL EXKXTKQIMMQVMLLXTHCXIMKLXSILIMKDMKHRDMMDFXRRMRLLHXKVPLLWLCXTLVKVLFSVSVXQLXWCSPVRELWQVPLLLE IXXWXMDCFFSFHYPXTFWELYIERLDKHSXIXTPCLLYSRXTPKLKTKXWHLPFRSHHRQLPWPLIMCILNTLRARKSLVEYPLKSLQE RKWPLXEVVGQGKAQXXGYYFASMSLKRVAFILLVKIYKMXAWKAFGGQWEWYLRMLSSSIILFITTSYMETSVLHLRKCMQWQNXLDFM MQFFECHMDMTPKXGNEDSSFQEEKSKEXQLQEPFXRTPQSYSMMKLLHRXIRLLKRLFLVPXRMWSNTELLFSLHTDCQQWLMQMKSLS >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000339447_chrX_74334669_-_663aa MTAEPMRFQSHXKVSHGRDWEKAIQDSSXMLQRLSRYGHXXKRGHVGMVMQEEDSTQTQKKGPXILWFPSCLNMLXTASTRCRETCXTXV MHQIQLQPWQQQFXLAMVYQELELLFLTKFEMQYLARXPRIQSEEXPKMSFSIFTTWIWVFTXADRRELYLRLLTEEQGVSVLSXVLWYL IFFPSCLKXCLSVVFCITNAVPSLLWXPLEHLVHTQHSQLQSHGGELDLEXKXTKQIMMQVMLLXTHCXIMKLXSILIMKDMKHRDMMDF XRRMRLLHXKVPLLWLCXTLVKVLFSVSVXQLXWCSPVRELWQVPLLLEIXXWXMDCFFSFHYPXTFWELYIERLDKHSXIXTPCLLYSR XTPKLKTKXWHLPFRSHHRQLPWPLIMCILNTLRARKSLVEYPLKSLQERKWPLXEVVGQGKAQXXGYYFASMSLKRVAFILLVKIYKMX AWKAFGGQWEWYLRMLSSSIILFITTSYMETSVLHLRKCMQWQNXLDFMMQFFECHMDMTPKXGNEDSSFQEEKSKEXQLQEPFXRTPQS YSMMKLLHRXIRLLKRLFLVPXRMWSNTELLFSLHTDCQQWLMQMKSLSWIRVRXPNVVPTMVCLLTLIVSIQKCGIHRAAVCRTMITPN >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000373394_chrX_74334669_-_703aa MTAEPMRFQSHXKVSHGRDWEKAIQDSSXMLQRLSRYGHXXKRGHVGMVMQEEDSTQTQKKGXKMLILGKSXKQCFLMCGPKTGQIYELE LPFRWDFWVVQRPXILWFPSCLNMLXTASTRCRETCXTXVMHQIQLQPWQQQFXLAMVYQELELLFLTKFEMQYLARXPRIQSEEXPKMS FSIFTTWIWVFTXADRRELYLRLLTEEQGVSVLSXVLWYLIFFPSCLKXCLSVVFCITNAVPSLLWXPLEHLVHTQHSQLQSHGGELDLE XKXTKQIMMQVMLLXTHCXIMKLXSILIMKDMKHRDMMDFXRRMRLLHXKVPLLWLCXTLVKVLFSVSVXQLXWCSPVRELWQVPLLLEI XXWXMDCFFSFHYPXTFWELYIERLDKHSXIXTPCLLYSRXTPKLKTKXWHLPFRSHHRQLPWPLIMCILNTLRARKSLVEYPLKSLQER KWPLXEVVGQGKAQXXGYYFASMSLKRVAFILLVKIYKMXAWKAFGGQWEWYLRMLSSSIILFITTSYMETSVLHLRKCMQWQNXLDFMM QFFECHMDMTPKXGNEDSSFQEEKSKEXQLQEPFXRTPQSYSMMKLLHRXIRLLKRLFLVPXRMWSNTELLFSLHTDCQQWLMQMKSLSW >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000253577_chrX_74334669_-_704aa MTAEPMSRFQSHXKVSHGRDWEKAIQDSSXMLQRLSRYGHXXKRGHVGMVMQEEDSTQTQKKGXKMLILGKSXKQCFLMCGPKTGQIYEL ELPFRWDFWVVQRPXILWFPSCLNMLXTASTRCRETCXTXVMHQIQLQPWQQQFXLAMVYQELELLFLTKFEMQYLARXPRIQSEEXPKM SFSIFTTWIWVFTXADRRELYLRLLTEEQGVSVLSXVLWYLIFFPSCLKXCLSVVFCITNAVPSLLWXPLEHLVHTQHSQLQSHGGELDL EXKXTKQIMMQVMLLXTHCXIMKLXSILIMKDMKHRDMMDFXRRMRLLHXKVPLLWLCXTLVKVLFSVSVXQLXWCSPVRELWQVPLLLE IXXWXMDCFFSFHYPXTFWELYIERLDKHSXIXTPCLLYSRXTPKLKTKXWHLPFRSHHRQLPWPLIMCILNTLRARKSLVEYPLKSLQE RKWPLXEVVGQGKAQXXGYYFASMSLKRVAFILLVKIYKMXAWKAFGGQWEWYLRMLSSSIILFITTSYMETSVLHLRKCMQWQNXLDFM MQFFECHMDMTPKXGNEDSSFQEEKSKEXQLQEPFXRTPQSYSMMKLLHRXIRLLKRLFLVPXRMWSNTELLFSLHTDCQQWLMQMKSLS >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000339447_chrX_74334669_-_663aa MTAEPMRFQSHXKVSHGRDWEKAIQDSSXMLQRLSRYGHXXKRGHVGMVMQEEDSTQTQKKGPXILWFPSCLNMLXTASTRCRETCXTXV MHQIQLQPWQQQFXLAMVYQELELLFLTKFEMQYLARXPRIQSEEXPKMSFSIFTTWIWVFTXADRRELYLRLLTEEQGVSVLSXVLWYL IFFPSCLKXCLSVVFCITNAVPSLLWXPLEHLVHTQHSQLQSHGGELDLEXKXTKQIMMQVMLLXTHCXIMKLXSILIMKDMKHRDMMDF XRRMRLLHXKVPLLWLCXTLVKVLFSVSVXQLXWCSPVRELWQVPLLLEIXXWXMDCFFSFHYPXTFWELYIERLDKHSXIXTPCLLYSR XTPKLKTKXWHLPFRSHHRQLPWPLIMCILNTLRARKSLVEYPLKSLQERKWPLXEVVGQGKAQXXGYYFASMSLKRVAFILLVKIYKMX AWKAFGGQWEWYLRMLSSSIILFITTSYMETSVLHLRKCMQWQNXLDFMMQFFECHMDMTPKXGNEDSSFQEEKSKEXQLQEPFXRTPQS YSMMKLLHRXIRLLKRLFLVPXRMWSNTELLFSLHTDCQQWLMQMKSLSWIRVRXPNVVPTMVCLLTLIVSIQKCGIHRAAVCRTMITPN >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000373394_chrX_74334669_-_703aa MTAEPMRFQSHXKVSHGRDWEKAIQDSSXMLQRLSRYGHXXKRGHVGMVMQEEDSTQTQKKGXKMLILGKSXKQCFLMCGPKTGQIYELE LPFRWDFWVVQRPXILWFPSCLNMLXTASTRCRETCXTXVMHQIQLQPWQQQFXLAMVYQELELLFLTKFEMQYLARXPRIQSEEXPKMS FSIFTTWIWVFTXADRRELYLRLLTEEQGVSVLSXVLWYLIFFPSCLKXCLSVVFCITNAVPSLLWXPLEHLVHTQHSQLQSHGGELDLE XKXTKQIMMQVMLLXTHCXIMKLXSILIMKDMKHRDMMDFXRRMRLLHXKVPLLWLCXTLVKVLFSVSVXQLXWCSPVRELWQVPLLLEI XXWXMDCFFSFHYPXTFWELYIERLDKHSXIXTPCLLYSRXTPKLKTKXWHLPFRSHHRQLPWPLIMCILNTLRARKSLVEYPLKSLQER KWPLXEVVGQGKAQXXGYYFASMSLKRVAFILLVKIYKMXAWKAFGGQWEWYLRMLSSSIILFITTSYMETSVLHLRKCMQWQNXLDFMM QFFECHMDMTPKXGNEDSSFQEEKSKEXQLQEPFXRTPQSYSMMKLLHRXIRLLKRLFLVPXRMWSNTELLFSLHTDCQQWLMQMKSLSW |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000253577_chrX_74334669_-_2114nt ATGACCGCTGAGCCCATGAGCAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAG ATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGGTCATGCAGGAGGAGGACTCCACACAGACCCAA AAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTA GAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCTCA ACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGTAT CAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAATG TCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAGGG GTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAAAT GCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATTTA GAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAATG AAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAACT TTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAG ATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACTCA TAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACAGA CAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAA AGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCA TTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCC ATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCATG ATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAA TTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCTTG GTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGTCT TGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACAGA GCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAG >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000339447_chrX_74334669_-_1991nt ATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATG CTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAG AAGGGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTG ATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTC GAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTT TTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTA ATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAA CACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAG GTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTT TGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAA CAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGC TTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGG TAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTG AATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAG GGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGA GCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAA ACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACA CCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCA TACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTT CTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCC ACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAAT GGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACT >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000373394_chrX_74334669_-_2111nt ATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATG CTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAG AAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAG TTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACC AGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAA GAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCT TTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTA TCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCG GTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAA TAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAA GATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTG GTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATC TAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACTCATAG ATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACAGACAG CTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGA AAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTT ATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATA ATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATG CAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTG CAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTG CCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGG ATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACAGAGCA GCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAA >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000253577_chrX_74334669_-_2114nt ATGACCGCTGAGCCCATGAGCAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAG ATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGGTCATGCAGGAGGAGGACTCCACACAGACCCAA AAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTA GAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCTCA ACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGTAT CAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAATG TCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAGGG GTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAAAT GCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATTTA GAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAATG AAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAACT TTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAG ATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACTCA TAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACAGA CAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAA AGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCA TTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCC ATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCATG ATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAA TTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCTTG GTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGTCT TGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACAGA GCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAG >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000339447_chrX_74334669_-_1991nt ATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATG CTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAG AAGGGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTG ATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTC GAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTT TTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTA ATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAA CACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAG GTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTT TGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAA CAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGC TTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGG TAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTG AATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAG GGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGA GCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAA ACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACA CCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCA TACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTT CTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCC ACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAAT GGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACT >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000373394_chrX_74334669_-_2111nt ATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATG CTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAG AAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAG TTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACC AGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAA GAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCT TTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTA TCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCG GTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAA TAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAA GATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTG GTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATC TAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACTCATAG ATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACAGACAG CTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGA AAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTT ATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATA ATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATG CAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTG CAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTG CCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGG ATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACAGAGCA GCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000253577_chrX_74334669_-_2419nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGCAGATTCCAGAGTCATTAAAAAGTATCACATGGCA GAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCA TGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTA TGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGT TCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAAC CATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGT AGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGG AGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGA AGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATT CACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACT GCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTC ATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAG TCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCT GGGAACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAA AGTGATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGT CCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCT ATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGC AGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGA AGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACT CAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTC ATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATT GTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCC TCATAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATAT ATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGA >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000339447_chrX_74334669_-_2294nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCT CAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGT ATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAA TGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAG GGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAA ATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATT TAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAA TGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAA CTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGG AGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACT CATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACA GACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGG AAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAG CATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTT CCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCA TGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGC AATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCT TGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGT CTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACA GAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGA AGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACATTTTCTTTTTTTGTTGTTTTGGACTACATAT >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ABCB7_ENST00000373394_chrX_74334669_-_2412nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGT GTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCC CTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCAT GGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGC CCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGC TTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGT GATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCAC AGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCT GAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATT GAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCA GGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGG AACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGT GATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCT TAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATT ATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGT GGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGT GTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAA GCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATC GTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTC AACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCA TAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATC CAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACAT >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000253577_chrX_74334669_-_2419nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGCAGATTCCAGAGTCATTAAAAAGTATCACATGGCA GAGATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCA TGGTCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTA TGTGTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGT TCCCTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAAC CATGGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGT AGCCCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGG AGCTTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGA AGTGATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATT CACAGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACT GCTGAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTC ATTGAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAG TCAGGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCT GGGAACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAA AGTGATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGT CCTTAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCT ATTATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGC AGTGGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGA AGTGTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACT CAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTC ATCGTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATT GTCAACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCC TCATAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATAT ATCCAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGA >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000339447_chrX_74334669_-_2294nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGGCCATGAATATTGTGGTTCCCTTCATGTTTAAATATGCTGTAGACAGCCT CAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCATGGCAACAGCAGTTCTGATTGGCTATGGTGT ATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGCCCAGAATTCAATCCGAAGAATAGCCAAAAA TGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGCTTTATCTAAGGCTATTGACAGAGGAACAAG GGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGTGATGCTTGTCAGTGGTGTTTTGTATTACAA ATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCACAGTTGCAGTCACACGGTGGAGAACTAGATT TAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCTGAATTATGAAACTGTGAAGTATTTTAATAA TGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATTGAAAAGTACCTCTACTCTGGCTATGCTGAA CTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCAGGGAATTGTGGCAGGTACCCTTACTGTTGG AGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGGAACTGTATATAGAGAGACTAGACAAGCACT CATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGTGATGGCATCTCCCCTTCAGATCACACCACA GACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCTTAGTGGAATATCCTTTGAAGTCCCTGCAGG AAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATTATTTCGCTTCTATGAGCCTCAAAAGGGTAG CATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGTGGGAGTGGTACCTCAGGATGCTGTCCTCTT CCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGTGTATGCAGTGGCAAAATTAGCTGGACTTCA TGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAAGCTTTCAGGAGGAGAAAAGCAAAGAGTAGC AATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATCGTTAGATTCGATTACTGAAGAGACTATTCT TGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTCAACAGTGGTTGATGCAGATGAAATCATTGT CTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCATAGTATCTATTCAGAAATGTGGCATACACA GAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATCCAAAGAGGAGGAAAGAAAGAAACTACAAGA AGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACATTTTCTTTTTTTGTTGTTTTGGACTACATAT >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ABCB7_ENST00000373394_chrX_74334669_-_2412nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGATTCCAGAGTCATTAAAAAGTATCACATGGCAGAG ATTGGGAAAAGGCAATTCAGGACAGTTCTTAGATGCTGCAAAGGCTCTCCAGGTATGGCCACTGATAGAAAAGAGGACATGTTGGCATGG TCATGCAGGAGGAGGACTCCACACAGACCCAAAAGAAGGGTTAAAAGATGTTGATACTCGGAAAATCATAAAAGCAATGCTTTCTTATGT GTGGCCCAAAGACAGGCCAGATCTACGAGCTAGAGTTGCCATTTCGCTGGGATTTTTGGGTGGTGCAAAGGCCATGAATATTGTGGTTCC CTTCATGTTTAAATATGCTGTAGACAGCCTCAACCAGATGTCGGGAAACATGCTGAACCTGAGTGATGCACCAAATACAGTTGCAACCAT GGCAACAGCAGTTCTGATTGGCTATGGTGTATCAAGAGCTGGAGCTGCTTTTTTTAACGAAGTTCGAAATGCAGTATTTGGCAAGGTAGC CCAGAATTCAATCCGAAGAATAGCCAAAAATGTCTTTCTCCATCTTCACAACCTGGATCTGGGTTTTCACCTGAGCAGACAGACGGGAGC TTTATCTAAGGCTATTGACAGAGGAACAAGGGGTATCAGTTTTGTCCTGAGTGCTTTGGTATTTAATCTTCTTCCCATCATGTTTGAAGT GATGCTTGTCAGTGGTGTTTTGTATTACAAATGCGGTGCCCAGTTTGCTTTGGTAACCCTTGGAACACTTGGTACATACACAGCATTCAC AGTTGCAGTCACACGGTGGAGAACTAGATTTAGAATAGAAATGAACAAAGCAGATAATGATGCAGGTAATGCTGCTATAGACTCACTGCT GAATTATGAAACTGTGAAGTATTTTAATAATGAAAGATATGAAGCACAGAGATATGATGGATTTTTGAAGACGTATGAGACTGCTTCATT GAAAAGTACCTCTACTCTGGCTATGCTGAACTTTGGTCAAAGTGCTATTTTCAGTGTCGGTTTAACAGCTATAATGGTGCTCGCCAGTCA GGGAATTGTGGCAGGTACCCTTACTGTTGGAGATCTAGTAATGGTGAATGGACTGCTTTTTCAGCTTTCATTACCCCTGAACTTTCTGGG AACTGTATATAGAGAGACTAGACAAGCACTCATAGATATGAACACCTTGTTTACTCTACTCAAGGTAGACACCCAAATTAAAGACAAAGT GATGGCATCTCCCCTTCAGATCACACCACAGACAGCTACCGTGGCCTTTGATAATGTGCATTTTGAATACATTGAGGGCCAGAAAGTCCT TAGTGGAATATCCTTTGAAGTCCCTGCAGGAAAGAAAGTGGCCATTGTAGGAGGTAGTGGGTCAGGGAAAAGCACAATAGTGAGGCTATT ATTTCGCTTCTATGAGCCTCAAAAGGGTAGCATTTATCTTGCTGGTCAAAATATACAAGATGTGAGCCTGGAAAGCCTTCGGAGGGCAGT GGGAGTGGTACCTCAGGATGCTGTCCTCTTCCATAATACTATTTATTACAACCTCTTATATGGAAACATCAGTGCTTCACCTGAGGAAGT GTATGCAGTGGCAAAATTAGCTGGACTTCATGATGCAATTCTTCGAATGCCACATGGATATGACACCCAAGTAGGGGAACGAGGACTCAA GCTTTCAGGAGGAGAAAAGCAAAGAGTAGCAATTGCAAGAGCCATTTTGAAGGACCCCCCAGTCATACTCTATGATGAAGCTACTTCATC GTTAGATTCGATTACTGAAGAGACTATTCTTGGTGCCATGAAGGATGTGGTCAAACACAGAACTTCTATTTTCATTGCACACAGATTGTC AACAGTGGTTGATGCAGATGAAATCATTGTCTTGGATCAGGGTAAGGTAGCCGAACGTGGTACCCACCATGGTTTGCTTGCTAACCCTCA TAGTATCTATTCAGAAATGTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGGAAGCAAAGAAAGAAAATATATC CAAAGAGGAGGAAAGAAAGAAACTACAAGAAGAAATTGTCAATAGTGTGAAAGGCTGTGGAAACTGTTCGTGCTAAGTCACATAAGACAT |
Top |
FusionGenePPI for ATRX_ABCB7 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ATRX | EIF4A2, EZH2, CCSER2, KIAA1377, LUC7L2, PTN, PTPN4, RAD51, SMC1A, CBX5, H3F3A, H3F3B, DAXX, HDAC4, HIST1H3A, WRN, CALM1, SVIL, ZBED1, HIST2H3C, BLM, NEK1, ZNF512B, PRKDC, RAD50, XRCC5, MRE11A, XRCC6, SUPT16H, NBN, SSRP1, HIST1H4J, HIST2H2BE, RPA1, TP53, HIST1H1C, RAD9A, HIST1H2BL, HIST1H2AB, RAD1, PML, NSD1, SUMO2, TMPO, CNOT1, LRRK2, H2AFY, SNW1, ZNF274, TRIM28, SETDB1, BMI1, AURKA, HIST1H4A, WDR1, EAF1, DDX20, NAF1, EIF2AK1, AP3B1, POLD1, RBM14, MFAP1 | ABCB7 | FECH, ICT1, PCK1, APP, MRPL10, ATP6V1D, PDCD6, NDUFB6, UQCRC1, MTCH1, SDF4, UNK, NTRK1, ACAT1, CKB, CKM, FKBP8, MAT2A, RAB2A, YBX3, EPRS, RPN1, FOXS1, FAF2, COQ9, NDUFA4, UBC, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 1189_1326 | 6 | 2493 | DAXX |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 1189_1326 | 6 | 2455 | DAXX |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000373344 | - | 1 | 35 | 2010_2280 | 6 | 2493 | MECP2 |
Hgene | ATRX | chrX:77041468 | chrX:74334669 | ENST00000395603 | - | 1 | 34 | 2010_2280 | 6 | 2455 | MECP2 |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for ATRX_ABCB7 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for ATRX_ABCB7 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ATRX | C1845055 | ALPHA-THALASSEMIA/MENTAL RETARDATION SYNDROME, NONDELETION TYPE, X-LINKED | 11 | CTD_human;ORPHANET;UNIPROT |
Hgene | ATRX | C0796003 | Juberg-Marsidi syndrome | 5 | CTD_human;ORPHANET;UNIPROT |
Hgene | ATRX | C0017638 | Glioma | 2 | CTD_human |
Hgene | ATRX | C0027819 | Neuroblastoma | 2 | CTD_human |
Hgene | ATRX | C0010417 | Cryptorchidism | 1 | CTD_human;HPO |
Hgene | ATRX | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Hgene | ATRX | C0018273 | Growth Disorders | 1 | CTD_human |
Hgene | ATRX | C0030297 | Pancreatic Neoplasm | 1 | CTD_human |
Hgene | ATRX | C0030846 | Penile Diseases | 1 | CTD_human |
Hgene | ATRX | C0039978 | Thoracic Diseases | 1 | CTD_human |
Hgene | ATRX | C0206754 | Neuroendocrine Tumors | 1 | CTD_human |
Hgene | ATRX | C0376634 | Craniofacial Abnormalities | 1 | CTD_human |
Hgene | ATRX | C1136249 | Mental Retardation, X-Linked | 1 | CTD_human |
Hgene | ATRX | C3463824 | MYELODYSPLASTIC SYNDROME | 1 | CTD_human;HPO |
Tgene | ABCB7 | C1845028 | ANEMIA, SIDEROBLASTIC, AND SPINOCEREBELLAR ATAXIA | 5 | CTD_human;ORPHANET;UNIPROT |
Tgene | ABCB7 | C0002896 | Sideroblastic anemia | 2 | CTD_human;HPO |
Tgene | ABCB7 | C0004134 | Ataxia | 1 | CTD_human |