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Fusion gene ID: 353 |
FusionGeneSummary for ACAP2_XXYLT1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ACAP2_XXYLT1 | Fusion gene ID: 353 | Hgene | Tgene | Gene symbol | ACAP2 | XXYLT1 | Gene ID | 23527 | 152002 |
| Gene name | ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 | xyloside xylosyltransferase 1 | |
| Synonyms | CENTB2|CNT-B2 | C3orf21 | |
| Cytomap | 3q29 | 3q29 | |
| Type of gene | protein-coding | protein-coding | |
| Description | arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2Arf GAP with coiled coil, ANK repeat and PH domains 2centaurin-beta-2 | xyloside xylosyltransferase 1UDP-xylose:alpha-xyloside alpha-1,3-xylosyltransferase | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | Q15057 | Q8NBI6 | |
| Ensembl transtripts involved in fusion gene | ENST00000326793, ENST00000472860, | ENST00000310380, ENST00000437101, ENST00000429994, ENST00000355729, ENST00000460582, ENST00000356740, | |
| Fusion gene scores | * DoF score | 9 X 7 X 10=630 | 3 X 4 X 6=72 |
| # samples | 13 | 7 | |
| ** MAII score | log2(13/630*10)=-2.27684020535882 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(7/72*10)=-0.0406419844973459 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: ACAP2 [Title/Abstract] AND XXYLT1 [Title/Abstract] AND fusion [Title/Abstract] A novel proximal 3q29 chromosome microdeletion in a Chinese patient with Chiari malformation type II and Sprengel’s deformity (pmid: 29410707) | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | XXYLT1 | GO:0016266 | O-glycan processing | 8982869|22117070 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | BLCA | TCGA-BT-A0YX-01A | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| TCGA | LD | BLCA | TCGA-BT-A20J-01A | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| TCGA | LD | BRCA | TCGA-E9-A1QZ-01A | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| TCGA | LD | ESCA | TCGA-IG-A97H-01A | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| TCGA | LD | LUSC | TCGA-22-5479-01A | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000326793 | ENST00000310380 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| Frame-shift | ENST00000326793 | ENST00000437101 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| Frame-shift | ENST00000326793 | ENST00000429994 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| Frame-shift | ENST00000326793 | ENST00000355729 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| 5CDS-intron | ENST00000326793 | ENST00000460582 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| 5CDS-intron | ENST00000326793 | ENST00000356740 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| intron-3CDS | ENST00000472860 | ENST00000310380 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| intron-3CDS | ENST00000472860 | ENST00000437101 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| intron-3CDS | ENST00000472860 | ENST00000429994 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| intron-3CDS | ENST00000472860 | ENST00000355729 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| intron-intron | ENST00000472860 | ENST00000460582 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| intron-intron | ENST00000472860 | ENST00000356740 | ACAP2 | chr3 | 195053757 | - | XXYLT1 | chr3 | 194877310 | - |
| In-frame | ENST00000326793 | ENST00000310380 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| 5CDS-intron | ENST00000326793 | ENST00000437101 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| 5CDS-intron | ENST00000326793 | ENST00000429994 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| 5CDS-intron | ENST00000326793 | ENST00000355729 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| 5CDS-intron | ENST00000326793 | ENST00000460582 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| 5CDS-intron | ENST00000326793 | ENST00000356740 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| intron-3CDS | ENST00000472860 | ENST00000310380 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| intron-intron | ENST00000472860 | ENST00000437101 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| intron-intron | ENST00000472860 | ENST00000429994 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| intron-intron | ENST00000472860 | ENST00000355729 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| intron-intron | ENST00000472860 | ENST00000460582 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| intron-intron | ENST00000472860 | ENST00000356740 | ACAP2 | chr3 | 195063200 | - | XXYLT1 | chr3 | 194947585 | - |
| In-frame | ENST00000326793 | ENST00000310380 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| Frame-shift | ENST00000326793 | ENST00000437101 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| In-frame | ENST00000326793 | ENST00000429994 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| Frame-shift | ENST00000326793 | ENST00000355729 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| 5CDS-5UTR | ENST00000326793 | ENST00000460582 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| 5CDS-5UTR | ENST00000326793 | ENST00000356740 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000310380 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000437101 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000429994 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000355729 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-5UTR | ENST00000472860 | ENST00000460582 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-5UTR | ENST00000472860 | ENST00000356740 | ACAP2 | chr3 | 195101738 | - | XXYLT1 | chr3 | 194790840 | - |
| In-frame | ENST00000326793 | ENST00000310380 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| Frame-shift | ENST00000326793 | ENST00000437101 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| In-frame | ENST00000326793 | ENST00000429994 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| Frame-shift | ENST00000326793 | ENST00000355729 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| 5CDS-5UTR | ENST00000326793 | ENST00000460582 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| 5CDS-5UTR | ENST00000326793 | ENST00000356740 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000310380 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000437101 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000429994 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-3CDS | ENST00000472860 | ENST00000355729 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-5UTR | ENST00000472860 | ENST00000460582 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
| intron-5UTR | ENST00000472860 | ENST00000356740 | ACAP2 | chr3 | 195163524 | - | XXYLT1 | chr3 | 194790840 | - |
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FusionProtFeatures for ACAP2_XXYLT1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| ACAP2 | XXYLT1 |
| GTPase-activating protein (GAP) for ADP ribosylationfactor 6 (ARF6). {ECO:0000269|PubMed:11062263}. | Alpha-1,3-xylosyltransferase, which elongates the O-linked xylose-glucose disaccharide attached to EGF-like repeats inthe extracellular domain of target proteins by catalyzing theaddition of the second xylose (PubMed:22117070, PubMed:8982869).Known targets include Notch proteins and coagulation factors, suchas F9 (PubMed:22117070, PubMed:8982869).{ECO:0000269|PubMed:22117070, ECO:0000269|PubMed:8982869}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000355729 | - | 0 | 3 | 104_106 | 0 | 191 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000356740 | - | 0 | 2 | 104_106 | 0 | 188 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000437101 | - | 0 | 5 | 104_106 | -154 | 191 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 104_106 | 58 | 191 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 104_106 | 55 | 188 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 104_106 | 58 | 191 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 104_106 | 58 | 191 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 104_106 | 55 | 188 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 104_106 | 58 | 191 | Region | UDP-alpha-D-xylose binding |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000355729 | - | 0 | 3 | 1_23 | 0 | 191 | Topological domain | Cytoplasmic |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000355729 | - | 0 | 3 | 45_393 | 0 | 191 | Topological domain | Lumenal |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000356740 | - | 0 | 2 | 1_23 | 0 | 188 | Topological domain | Cytoplasmic |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000356740 | - | 0 | 2 | 45_393 | 0 | 188 | Topological domain | Lumenal |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000437101 | - | 0 | 5 | 1_23 | -154 | 191 | Topological domain | Cytoplasmic |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000437101 | - | 0 | 5 | 45_393 | -154 | 191 | Topological domain | Lumenal |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000355729 | - | 0 | 3 | 24_44 | 0 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000356740 | - | 0 | 2 | 24_44 | 0 | 188 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | >XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000437101 | - | 0 | 5 | 24_44 | -154 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >ACAP2 | chr3:195063200 | chr3:194947585 | ENST00000326793 | - | 6 | 23 | 1_226 | 176 | 779 | Domain | Note=BAR |
| Hgene | >ACAP2 | chr3:195063200 | chr3:194947585 | ENST00000326793 | - | 6 | 23 | 266_361 | 176 | 779 | Domain | PH |
| Hgene | >ACAP2 | chr3:195063200 | chr3:194947585 | ENST00000326793 | - | 6 | 23 | 399_520 | 176 | 779 | Domain | Arf-GAP |
| Hgene | >ACAP2 | chr3:195101738 | chr3:194790840 | ENST00000326793 | - | 4 | 23 | 1_226 | 95 | 779 | Domain | Note=BAR |
| Hgene | >ACAP2 | chr3:195101738 | chr3:194790840 | ENST00000326793 | - | 4 | 23 | 266_361 | 95 | 779 | Domain | PH |
| Hgene | >ACAP2 | chr3:195101738 | chr3:194790840 | ENST00000326793 | - | 4 | 23 | 399_520 | 95 | 779 | Domain | Arf-GAP |
| Hgene | >ACAP2 | chr3:195163524 | chr3:194790840 | ENST00000326793 | - | 1 | 23 | 1_226 | 17 | 779 | Domain | Note=BAR |
| Hgene | >ACAP2 | chr3:195163524 | chr3:194790840 | ENST00000326793 | - | 1 | 23 | 266_361 | 17 | 779 | Domain | PH |
| Hgene | >ACAP2 | chr3:195163524 | chr3:194790840 | ENST00000326793 | - | 1 | 23 | 399_520 | 17 | 779 | Domain | Arf-GAP |
| Hgene | >ACAP2 | chr3:195063200 | chr3:194947585 | ENST00000326793 | - | 6 | 23 | 640_669 | 176 | 779 | Repeat | Note=ANK 1 |
| Hgene | >ACAP2 | chr3:195063200 | chr3:194947585 | ENST00000326793 | - | 6 | 23 | 673_702 | 176 | 779 | Repeat | Note=ANK 2 |
| Hgene | >ACAP2 | chr3:195063200 | chr3:194947585 | ENST00000326793 | - | 6 | 23 | 706_735 | 176 | 779 | Repeat | Note=ANK 3 |
| Hgene | >ACAP2 | chr3:195101738 | chr3:194790840 | ENST00000326793 | - | 4 | 23 | 640_669 | 95 | 779 | Repeat | Note=ANK 1 |
| Hgene | >ACAP2 | chr3:195101738 | chr3:194790840 | ENST00000326793 | - | 4 | 23 | 673_702 | 95 | 779 | Repeat | Note=ANK 2 |
| Hgene | >ACAP2 | chr3:195101738 | chr3:194790840 | ENST00000326793 | - | 4 | 23 | 706_735 | 95 | 779 | Repeat | Note=ANK 3 |
| Hgene | >ACAP2 | chr3:195163524 | chr3:194790840 | ENST00000326793 | - | 1 | 23 | 640_669 | 17 | 779 | Repeat | Note=ANK 1 |
| Hgene | >ACAP2 | chr3:195163524 | chr3:194790840 | ENST00000326793 | - | 1 | 23 | 673_702 | 17 | 779 | Repeat | Note=ANK 2 |
| Hgene | >ACAP2 | chr3:195163524 | chr3:194790840 | ENST00000326793 | - | 1 | 23 | 706_735 | 17 | 779 | Repeat | Note=ANK 3 |
| Hgene | >ACAP2 | chr3:195063200 | chr3:194947585 | ENST00000326793 | - | 6 | 23 | 414_437 | 176 | 779 | Zinc finger | C4-type |
| Hgene | >ACAP2 | chr3:195101738 | chr3:194790840 | ENST00000326793 | - | 4 | 23 | 414_437 | 95 | 779 | Zinc finger | C4-type |
| Hgene | >ACAP2 | chr3:195163524 | chr3:194790840 | ENST00000326793 | - | 1 | 23 | 414_437 | 17 | 779 | Zinc finger | C4-type |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000310380 | - | 0 | 4 | 104_106 | 168 | 394 | Region | UDP-alpha-D-xylose binding |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 104_106 | 261 | 394 | Region | UDP-alpha-D-xylose binding |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 104_106 | 261 | 394 | Region | UDP-alpha-D-xylose binding |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000310380 | - | 0 | 4 | 1_23 | 168 | 394 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000310380 | - | 0 | 4 | 45_393 | 168 | 394 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 1_23 | 261 | 394 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 45_393 | 261 | 394 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 1_23 | 58 | 191 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 45_393 | 58 | 191 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 1_23 | 55 | 188 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 45_393 | 55 | 188 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 1_23 | 58 | 191 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 45_393 | 58 | 191 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 1_23 | 261 | 394 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 45_393 | 261 | 394 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 1_23 | 58 | 191 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 45_393 | 58 | 191 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 1_23 | 55 | 188 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 45_393 | 55 | 188 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 1_23 | 58 | 191 | Topological domain | Cytoplasmic |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 45_393 | 58 | 191 | Topological domain | Lumenal |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000310380 | - | 0 | 4 | 24_44 | 168 | 394 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 24_44 | 261 | 394 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 24_44 | 58 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 24_44 | 55 | 188 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 24_44 | 58 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 24_44 | 261 | 394 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 24_44 | 58 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 24_44 | 55 | 188 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 24_44 | 58 | 191 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
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FusionGeneSequence for ACAP2_XXYLT1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_ACAP2_ENST00000326793_chr3_195063200_-_XXYLT1_ENST00000310380_chr3_194947585_-_402aa MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCVANKQFMNGIRDLAQYSSNDAVVETSLTKFSDSLQEM INFHTILFDQTQRSIKAQLQNFVKEDLRKFKDAKKQFEKVSEEKENALVKNAQVQRNKQHEVEEATNILTATRKCFRHIALDYVLQVIFH DVAVLTDKLFPIVEAMQKHFSAGLGTYYSDSIFFLSVAMHQIMPKEILQIIQLDLDLKFKTNIRELFEEFDSFLPGAIIGIAREMQPVYR HTFWQFRHENPQTRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYSRLLEPAQVQQLADKYHFRGHLGDQDFFTMIGMEHPKLFHVLDCTW >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000310380_chr3_194790840_-_227aa MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCVANKQFMNGIRDLAQYSSNDAVVETSLTKFSDSLQEM INFHTAHILAVPPXEPPDPGWGPAPRGAAGLQQRGDVAEPGGHAPVPALQPPAGAGAGAAAGRQVPLPRPPRGPGLLHHDRHGAPQALPC >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000429994_chr3_194790840_-_227aa MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCVANKQFMNGIRDLAQYSSNDAVVETSLTKFSDSLQEM INFHTAHILAVPPXEPPDPGWGPAPRGAAGLQQRGDVAEPGGHAPVPALQPPAGAGAGAAAGRQVPLPRPPRGPGLLHHDRHGAPQALPC >In-frame_ACAP2_ENST00000326793_chr3_195163524_-_XXYLT1_ENST00000310380_chr3_194790840_-_150aa MKMTVDFEECLKDSPRFRHTFWQFRHENPQTRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYSRLLEPAQVQQLADKYHFRGHLGDQDFF >In-frame_ACAP2_ENST00000326793_chr3_195163524_-_XXYLT1_ENST00000429994_chr3_194790840_-_150aa MKMTVDFEECLKDSPRFRHTFWQFRHENPQTRVGGPPPEGLPGFNSGVMLLNLEAMRQSPLYSRLLEPAQVQQLADKYHFRGHLGDQDFF >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000310380_chr3_194790840_-_227aa MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCVANKQFMNGIRDLAQYSSNDAVVETSLTKFSDSLQEM INFHTAHILAVPPXEPPDPGWGPAPRGAAGLQQRGDVAEPGGHAPVPALQPPAGAGAGAAAGRQVPLPRPPRGPGLLHHDRHGAPQALPC >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000429994_chr3_194790840_-_227aa MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCVANKQFMNGIRDLAQYSSNDAVVETSLTKFSDSLQEM INFHTAHILAVPPXEPPDPGWGPAPRGAAGLQQRGDVAEPGGHAPVPALQPPAGAGAGAAAGRQVPLPRPPRGPGLLHHDRHGAPQALPC |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_ACAP2_ENST00000326793_chr3_195063200_-_XXYLT1_ENST00000310380_chr3_194947585_-_1206nt ATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAA TTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATTGCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATG AATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATG ATAAATTTTCACACAATCCTGTTTGACCAAACTCAGAGATCAATTAAGGCACAGCTTCAGAACTTTGTTAAAGAAGATCTTAGAAAATTC AAAGATGCCAAGAAGCAATTCGAAAAAGTCAGTGAAGAAAAAGAAAATGCGTTAGTAAAAAATGCCCAAGTACAAAGAAACAAACAACAT GAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACATAGCCCTCGATTATGTGCTTCAGGTCATCTTCCAC GATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTGGAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGAC TCCATCTTCTTCCTCTCGGTCGCCATGCATCAGATCATGCCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAG ACCAACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTCCTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGG CACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTG ATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTAC CACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGG AACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTAC >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000310380_chr3_194790840_-_682nt ATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAA TTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATTGCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATG AATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATG ATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGG CTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCA GCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGT GCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGG >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000429994_chr3_194790840_-_682nt ATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAA TTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATTGCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATG AATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATG ATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGG CTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCA GCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGT GCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGG >In-frame_ACAP2_ENST00000326793_chr3_195163524_-_XXYLT1_ENST00000310380_chr3_194790840_-_450nt ATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAG ACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCG CTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTC ACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGC TACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACTCCCATCCCGGAGGACTAG >In-frame_ACAP2_ENST00000326793_chr3_195163524_-_XXYLT1_ENST00000429994_chr3_194790840_-_450nt ATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAG ACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCG CTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTC ACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGC TACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACTCCCATCCCGGAGGACTAG >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000310380_chr3_194790840_-_682nt ATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAA TTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATTGCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATG AATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATG ATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGG CTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCA GCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGT GCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGG >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000429994_chr3_194790840_-_682nt ATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAA TTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATTGCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATG AATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATG ATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGG CTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCA GCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGT GCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGG |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_ACAP2_ENST00000326793_chr3_195063200_-_XXYLT1_ENST00000310380_chr3_194947585_-_2873nt CGTTTCCCTGCGGCCAGCGCTCTACTTGGGGCGGGAGGAAGAGGGGCGGGACTGGGGCCTGACTAGTCGTCGCCGTCTTCGCGGCTGCTA TGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGCGCGGCCG CTCCCGCGGCCCCCTCGGCTTTGCCAGCGCCGCCTGCGAGGCGGAGGCAGGATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGAC TCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAATTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATT GCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT GCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATGATAAATTTTCACACAATCCTGTTTGACCAAACTCAGAGA TCAATTAAGGCACAGCTTCAGAACTTTGTTAAAGAAGATCTTAGAAAATTCAAAGATGCCAAGAAGCAATTCGAAAAAGTCAGTGAAGAA AAAGAAAATGCGTTAGTAAAAAATGCCCAAGTACAAAGAAACAAACAACATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGA AAATGTTTCCGACACATAGCCCTCGATTATGTGCTTCAGGTCATCTTCCACGATGTTGCTGTGCTGACGGATAAGCTCTTCCCCATCGTG GAGGCCATGCAGAAGCACTTCAGTGCTGGCTTGGGAACCTACTACAGTGACTCCATCTTCTTCCTCTCGGTCGCCATGCATCAGATCATG CCCAAAGAGATCCTGCAGATCATTCAGCTGGACCTAGACCTGAAGTTTAAGACCAACATCCGGGAGTTGTTTGAGGAATTTGACAGTTTC CTGCCAGGCGCCATCATCGGCATAGCCCGGGAGATGCAGCCAGTTTACAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACC CGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTC TACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACC ATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTAC AGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACTCCCATCCCGGAGGACTAGGCG CTCCCCGTGCCTTGCCCCCGGGGCCTCCAGATCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCGCTAGA GAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCT GTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGGGAAGCAAGCACTTG AAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTTTTGGACCAATATAA ATTTAATTTAAATTGACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGAGCCCCAAACGGGTAAGGTAAG CCAAGGTTTTAATGACCAGCCCAGTATCTAAGCTTCCAAACGAATGCCAGCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCAT TCTCCTGATGCTCACGTCACTTGGTGTAGGTTTCAGGATCGCCTCTTTGAGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAAC TTATCTCATTATTAGAGTACTCACAGCTTGTATCTCCCAGCTACATCCTAGAACCCCATTGTCCTTTATTCCACCAAACCAGCTCCAGGT GACCAGACTCTACTCAGAAAGCAAATTCGTCATCAAAGAACAGAGACTGGCCACCACAAGGACATGCAGGAGAACTGTCGGGACCAGGAA GACTCATTCCAAAAAGCCCAGGCCGGGCACAGTCGTCAAGCCTGTAATCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCC TCGGAGGTCGAGATCAGCCTGGGAAACACAGGGAGGCCCCCATCGCTACAAAATATTTTAAAAATTAGCCAGGTGTGGTGGCTTGTGCTT GTTGTCCCGGCTACTTGGGAGGCTGAAGTGGGAGGGTGGCTTGAGTCCAGGAGTTCACTGCACTGAGCTGTGATCACACCACTGCACTCC AGCCTGGACGACAGAGTGAGACGTCCATCTCAAAAAAAAAAAAAAAACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCT TGGAAGACATGTCACTCATGGGCTAGTAAGCATTCTAGTTTCTTTGTTTAAAAAATCCCCTTATCATACCACGTTAGACCGTAGACCTTA GCAGAAATTAAAGCGTCATTTCTTTTGATGGGGCCTCCTGTACGTAGGCTGCAGACGTGAAAGCCCCAGGGGTCCATTTGTATCAATTTT >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000310380_chr3_194790840_-_2349nt CGTTTCCCTGCGGCCAGCGCTCTACTTGGGGCGGGAGGAAGAGGGGCGGGACTGGGGCCTGACTAGTCGTCGCCGTCTTCGCGGCTGCTA TGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGCGCGGCCG CTCCCGCGGCCCCCTCGGCTTTGCCAGCGCCGCCTGCGAGGCGGAGGCAGGATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGAC TCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAATTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATT GCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT GCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATGATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCA TGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCAT GCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGA CCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTG GAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACTCCCAT CCCGGAGGACTAGGCGCTCCCCGTGCCTTGCCCCCGGGGCCTCCAGATCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAG TGTCTGACCCGCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAGGCCACC CGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCT GGGAAGCAAGCACTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTT TTTTGGACCAATATAAATTTAATTTAAATTGACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGAGCCCC AAACGGGTAAGGTAAGCCAAGGTTTTAATGACCAGCCCAGTATCTAAGCTTCCAAACGAATGCCAGCCCATCACATACTCACCCTGGGAG GCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACTTGGTGTAGGTTTCAGGATCGCCTCTTTGAGGAAGGACTTCAGGACCAACTGGG GCCTGCATAAGAAAACTTATCTCATTATTAGAGTACTCACAGCTTGTATCTCCCAGCTACATCCTAGAACCCCATTGTCCTTTATTCCAC CAAACCAGCTCCAGGTGACCAGACTCTACTCAGAAAGCAAATTCGTCATCAAAGAACAGAGACTGGCCACCACAAGGACATGCAGGAGAA CTGTCGGGACCAGGAAGACTCATTCCAAAAAGCCCAGGCCGGGCACAGTCGTCAAGCCTGTAATCCCAACACTTTGGGAGACCGAGGTGG GGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACACAGGGAGGCCCCCATCGCTACAAAATATTTTAAAAATTAGCCAGGT GTGGTGGCTTGTGCTTGTTGTCCCGGCTACTTGGGAGGCTGAAGTGGGAGGGTGGCTTGAGTCCAGGAGTTCACTGCACTGAGCTGTGAT CACACCACTGCACTCCAGCCTGGACGACAGAGTGAGACGTCCATCTCAAAAAAAAAAAAAAAACCAAAAAGGAACCCAGCAATTCCCAAG TGTGACCATGTGGGCTTGGAAGACATGTCACTCATGGGCTAGTAAGCATTCTAGTTTCTTTGTTTAAAAAATCCCCTTATCATACCACGT TAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGATGGGGCCTCCTGTACGTAGGCTGCAGACGTGAAAGCCCCAGGGGTC CATTTGTATCAATTTTCATCTTGTTTTGTTTTGATTTCATTTACGTTTTTCTTTTTCCCATGAGTGAGGATAGCCAATAAATCATCTTTG >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000429994_chr3_194790840_-_951nt CGTTTCCCTGCGGCCAGCGCTCTACTTGGGGCGGGAGGAAGAGGGGCGGGACTGGGGCCTGACTAGTCGTCGCCGTCTTCGCGGCTGCTA TGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGCGCGGCCG CTCCCGCGGCCCCCTCGGCTTTGCCAGCGCCGCCTGCGAGGCGGAGGCAGGATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGAC TCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAATTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATT GCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT GCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATGATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCA TGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCAT GCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGA CCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTG GAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACTCCCAT >In-frame_ACAP2_ENST00000326793_chr3_195163524_-_XXYLT1_ENST00000310380_chr3_194790840_-_2117nt CGTTTCCCTGCGGCCAGCGCTCTACTTGGGGCGGGAGGAAGAGGGGCGGGACTGGGGCCTGACTAGTCGTCGCCGTCTTCGCGGCTGCTA TGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGCGCGGCCG CTCCCGCGGCCCCCTCGGCTTTGCCAGCGCCGCCTGCGAGGCGGAGGCAGGATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGAC TCGCCCCGCTTCAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGC TTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAG CTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTG CTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGC CACGTCAAGATCTACCACGGGAACTGCAACACTCCCATCCCGGAGGACTAGGCGCTCCCCGTGCCTTGCCCCCGGGGCCTCCAGATCTGG GGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAGTGTCTGACCCGCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTG AGACCTCCTGCCGGGCAGGTCACTGTGCTGAGGCCACCCGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGG GAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCTGGGAAGCAAGCACTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGT CTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTTTTTTGGACCAATATAAATTTAATTTAAATTGACAGCCTTCCATTTTTCGAGA AAGTACAAACAGAACTGCTTTAGCACCCATCGAGCCCCAAACGGGTAAGGTAAGCCAAGGTTTTAATGACCAGCCCAGTATCTAAGCTTC CAAACGAATGCCAGCCCATCACATACTCACCCTGGGAGGCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACTTGGTGTAGGTTTCAG GATCGCCTCTTTGAGGAAGGACTTCAGGACCAACTGGGGCCTGCATAAGAAAACTTATCTCATTATTAGAGTACTCACAGCTTGTATCTC CCAGCTACATCCTAGAACCCCATTGTCCTTTATTCCACCAAACCAGCTCCAGGTGACCAGACTCTACTCAGAAAGCAAATTCGTCATCAA AGAACAGAGACTGGCCACCACAAGGACATGCAGGAGAACTGTCGGGACCAGGAAGACTCATTCCAAAAAGCCCAGGCCGGGCACAGTCGT CAAGCCTGTAATCCCAACACTTTGGGAGACCGAGGTGGGGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACACAGGGAGG CCCCCATCGCTACAAAATATTTTAAAAATTAGCCAGGTGTGGTGGCTTGTGCTTGTTGTCCCGGCTACTTGGGAGGCTGAAGTGGGAGGG TGGCTTGAGTCCAGGAGTTCACTGCACTGAGCTGTGATCACACCACTGCACTCCAGCCTGGACGACAGAGTGAGACGTCCATCTCAAAAA AAAAAAAAAAACCAAAAAGGAACCCAGCAATTCCCAAGTGTGACCATGTGGGCTTGGAAGACATGTCACTCATGGGCTAGTAAGCATTCT AGTTTCTTTGTTTAAAAAATCCCCTTATCATACCACGTTAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGATGGGGCCT CCTGTACGTAGGCTGCAGACGTGAAAGCCCCAGGGGTCCATTTGTATCAATTTTCATCTTGTTTTGTTTTGATTTCATTTACGTTTTTCT >In-frame_ACAP2_ENST00000326793_chr3_195163524_-_XXYLT1_ENST00000429994_chr3_194790840_-_719nt CGTTTCCCTGCGGCCAGCGCTCTACTTGGGGCGGGAGGAAGAGGGGCGGGACTGGGGCCTGACTAGTCGTCGCCGTCTTCGCGGCTGCTA TGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGCGCGGCCG CTCCCGCGGCCCCCTCGGCTTTGCCAGCGCCGCCTGCGAGGCGGAGGCAGGATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGAC TCGCCCCGCTTCAGGCACACATTCTGGCAGTTCCGCCATGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGC TTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCATGCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAG CTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGACCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTG CTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTGGAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGC >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000310380_chr3_194790840_-_2349nt CGTTTCCCTGCGGCCAGCGCTCTACTTGGGGCGGGAGGAAGAGGGGCGGGACTGGGGCCTGACTAGTCGTCGCCGTCTTCGCGGCTGCTA TGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGCGCGGCCG CTCCCGCGGCCCCCTCGGCTTTGCCAGCGCCGCCTGCGAGGCGGAGGCAGGATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGAC TCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAATTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATT GCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT GCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATGATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCA TGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCAT GCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGA CCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTG GAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACTCCCAT CCCGGAGGACTAGGCGCTCCCCGTGCCTTGCCCCCGGGGCCTCCAGATCTGGGGGAAGGACAGGGTTCCTTGGGACAGACCCAAGGGCAG TGTCTGACCCGCTAGAGAGACACCGCAGGGAAGTCCTGTGATTAAGGTGCTGAGACCTCCTGCCGGGCAGGTCACTGTGCTGAGGCCACC CGCCAAGGACTGGCCTGTGCACTGCTGGTGCTTGGGACCTTATTCCTCCAGGGAGCAGGCGACACAAAGGACACGCATGTCCAGTGGGCT GGGAAGCAAGCACTTGAAGAGAAGGAAGGGGAGAAAGGGTCCCCCTTGCTGTCTGCCTCTGAGGAATGGAAATCCTTTAGACCCGGCCTT TTTTGGACCAATATAAATTTAATTTAAATTGACAGCCTTCCATTTTTCGAGAAAGTACAAACAGAACTGCTTTAGCACCCATCGAGCCCC AAACGGGTAAGGTAAGCCAAGGTTTTAATGACCAGCCCAGTATCTAAGCTTCCAAACGAATGCCAGCCCATCACATACTCACCCTGGGAG GCTGCTGCACGCGCATTCTCCTGATGCTCACGTCACTTGGTGTAGGTTTCAGGATCGCCTCTTTGAGGAAGGACTTCAGGACCAACTGGG GCCTGCATAAGAAAACTTATCTCATTATTAGAGTACTCACAGCTTGTATCTCCCAGCTACATCCTAGAACCCCATTGTCCTTTATTCCAC CAAACCAGCTCCAGGTGACCAGACTCTACTCAGAAAGCAAATTCGTCATCAAAGAACAGAGACTGGCCACCACAAGGACATGCAGGAGAA CTGTCGGGACCAGGAAGACTCATTCCAAAAAGCCCAGGCCGGGCACAGTCGTCAAGCCTGTAATCCCAACACTTTGGGAGACCGAGGTGG GGGTATCGATTGAGCCTCGGAGGTCGAGATCAGCCTGGGAAACACAGGGAGGCCCCCATCGCTACAAAATATTTTAAAAATTAGCCAGGT GTGGTGGCTTGTGCTTGTTGTCCCGGCTACTTGGGAGGCTGAAGTGGGAGGGTGGCTTGAGTCCAGGAGTTCACTGCACTGAGCTGTGAT CACACCACTGCACTCCAGCCTGGACGACAGAGTGAGACGTCCATCTCAAAAAAAAAAAAAAAACCAAAAAGGAACCCAGCAATTCCCAAG TGTGACCATGTGGGCTTGGAAGACATGTCACTCATGGGCTAGTAAGCATTCTAGTTTCTTTGTTTAAAAAATCCCCTTATCATACCACGT TAGACCGTAGACCTTAGCAGAAATTAAAGCGTCATTTCTTTTGATGGGGCCTCCTGTACGTAGGCTGCAGACGTGAAAGCCCCAGGGGTC CATTTGTATCAATTTTCATCTTGTTTTGTTTTGATTTCATTTACGTTTTTCTTTTTCCCATGAGTGAGGATAGCCAATAAATCATCTTTG >In-frame_ACAP2_ENST00000326793_chr3_195101738_-_XXYLT1_ENST00000429994_chr3_194790840_-_951nt CGTTTCCCTGCGGCCAGCGCTCTACTTGGGGCGGGAGGAAGAGGGGCGGGACTGGGGCCTGACTAGTCGTCGCCGTCTTCGCGGCTGCTA TGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGCGCGGCCG CTCCCGCGGCCCCCTCGGCTTTGCCAGCGCCGCCTGCGAGGCGGAGGCAGGATGAAGATGACTGTGGATTTCGAGGAGTGTCTGAAGGAC TCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTAGAAGGTGATGTGGCAGAATTGGAACTAAAACTTGATAAGCTTGTGAAACTTTGTATT GCAATGATTGATACTGGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT GCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAGAAATGATAAATTTTCACACAGCACACATTCTGGCAGTTCCGCCA TGAGAACCCCCAGACCCGGGTTGGGGGCCCGCCCCCCGAGGGGCTGCCGGGCTTCAACAGCGGGGTGATGTTGCTGAACCTGGAGGCCAT GCGCCAGTCCCCGCTCTACAGCCGCCTGCTGGAGCCGGCGCAGGTGCAGCAGCTGGCCGACAAGTACCACTTCCGCGGCCACCTCGGGGA CCAGGACTTCTTCACCATGATCGGCATGGAGCACCCCAAGCTCTTCCATGTGCTGGACTGTACCTGGAACCGGCAGCTGTGCACCTGGTG GAGGGACCATGGCTACAGTGACGTCTTCGAGGCCTATTTCAGGTGTGAGGGCCACGTCAAGATCTACCACGGGAACTGCAACACTCCCAT |
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FusionGenePPI for ACAP2_XXYLT1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| ACAP2 | SMURF1, HSPB1, RAB11FIP3, MED4, PDK3, SOAT1, NDUFS1, NDUFA9, PIGS, MBOAT7, EHBP1, GDI1, GPAA1, CYLD | XXYLT1 | ELAVL1, CUL4A, SHMT2, MOV10, NXF1, FAM63B, SCN3B, IZUMO1, HAUS7 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000310380 | - | 0 | 4 | 263_266 | 168 | 394 | target proteins |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000355729 | - | 0 | 3 | 263_266 | 0 | 191 | target proteins |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000356740 | - | 0 | 2 | 263_266 | 0 | 188 | target proteins |
| Tgene | XXYLT1 | chr3:195063200 | chr3:194947585 | ENST00000437101 | - | 0 | 5 | 263_266 | -154 | 191 | target proteins |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 263_266 | 261 | 394 | target proteins |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 263_266 | 58 | 191 | target proteins |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 263_266 | 55 | 188 | target proteins |
| Tgene | XXYLT1 | chr3:195101738 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 263_266 | 58 | 191 | target proteins |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000310380 | - | 2 | 4 | 263_266 | 261 | 394 | target proteins |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000355729 | - | 1 | 3 | 263_266 | 58 | 191 | target proteins |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000356740 | - | 0 | 2 | 263_266 | 55 | 188 | target proteins |
| Tgene | XXYLT1 | chr3:195163524 | chr3:194790840 | ENST00000437101 | - | 3 | 5 | 263_266 | 58 | 191 | target proteins |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ACAP2_XXYLT1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ACAP2_XXYLT1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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