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Fusion gene ID: 35238 |
FusionGeneSummary for SNUPN_ZNF233 |
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Fusion gene information | Fusion gene name: SNUPN_ZNF233 | Fusion gene ID: 35238 | Hgene | Tgene | Gene symbol | SNUPN | ZNF233 | Gene ID | 10073 | 353355 |
Gene name | snurportin 1 | zinc finger protein 233 | |
Synonyms | KPNBL|RNUT1|Snurportin1 | - | |
Cytomap | 15q24.2 | 19q13.31 | |
Type of gene | protein-coding | protein-coding | |
Description | snurportin-1RNA U transporter 1 | zinc finger protein 233 | |
Modification date | 20180519 | 20180523 | |
UniProtAcc | O95149 | A6NK53 | |
Ensembl transtripts involved in fusion gene | ENST00000567134, ENST00000308588, ENST00000564644, ENST00000371091, ENST00000564675, | ENST00000334152, ENST00000592581, ENST00000391958, ENST00000589522, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 3 X 2 X 2=12 |
# samples | 2 | 3 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(3/12*10)=1.32192809488736 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: SNUPN [Title/Abstract] AND ZNF233 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LUSC | TCGA-18-3414-01A | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000567134 | ENST00000334152 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000567134 | ENST00000592581 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000567134 | ENST00000391958 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000567134 | ENST00000589522 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
Frame-shift | ENST00000308588 | ENST00000334152 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000308588 | ENST00000592581 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000308588 | ENST00000391958 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000308588 | ENST00000589522 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
In-frame | ENST00000564644 | ENST00000334152 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000564644 | ENST00000592581 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000564644 | ENST00000391958 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000564644 | ENST00000589522 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
Frame-shift | ENST00000371091 | ENST00000334152 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000371091 | ENST00000592581 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000371091 | ENST00000391958 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000371091 | ENST00000589522 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
Frame-shift | ENST00000564675 | ENST00000334152 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000564675 | ENST00000592581 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000564675 | ENST00000391958 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
5CDS-5UTR | ENST00000564675 | ENST00000589522 | SNUPN | chr15 | 75909749 | - | ZNF233 | chr19 | 44768467 | + |
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FusionProtFeatures for SNUPN_ZNF233 |
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Hgene | Tgene |
SNUPN | ZNF233 |
Functions as an U snRNP-specific nuclear import adapter.Involved in the trimethylguanosine (m3G)-cap-dependent nuclearimport of U snRNPs. Binds specifically to the terminal m3G-cap UsnRNAs. {ECO:0000269|PubMed:10209022, ECO:0000269|PubMed:15920472,ECO:0000269|PubMed:16030253, ECO:0000269|PubMed:9670026}. | May be involved in transcriptional regulation. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000308588 | - | 3 | 9 | 11_73 | 101 | 361 | Domain | IBB |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000564644 | - | 4 | 10 | 11_73 | 101 | 361 | Domain | IBB |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000564675 | - | 3 | 9 | 11_73 | 101 | 361 | Domain | IBB |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000567134 | - | 4 | 10 | 11_73 | 101 | 361 | Domain | IBB |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 8_79 | -16 | 671 | Domain | KRAB |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 258_280 | -16 | 671 | Zinc finger | C2H2-type 1%3B degenerate |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 311_336 | -16 | 671 | Zinc finger | C2H2-type 2%3B degenerate |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 342_364 | -16 | 671 | Zinc finger | C2H2-type 3%3B degenerate |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 370_392 | -16 | 671 | Zinc finger | C2H2-type 4%3B degenerate |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 398_420 | -16 | 671 | Zinc finger | C2H2-type 5%3B degenerate |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 452_474 | -16 | 671 | Zinc finger | C2H2-type 6 |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 480_502 | -16 | 671 | Zinc finger | C2H2-type 7 |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 508_530 | -16 | 671 | Zinc finger | C2H2-type 8 |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 536_558 | -16 | 671 | Zinc finger | C2H2-type 9 |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 564_586 | -16 | 671 | Zinc finger | C2H2-type 10 |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 592_614 | -16 | 671 | Zinc finger | C2H2-type 11 |
Tgene | >ZNF233 | chr15:75909749 | chr19:44768467 | ENST00000391958 | + | 0 | 5 | 620_642 | -16 | 671 | Zinc finger | C2H2-type 12 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >SNUPN | chr15:75909749 | chr19:44768467 | ENST00000308588 | - | 3 | 9 | 208_328 | 101 | 361 | Region | Necessary for binding to the m3G-cap structure |
Hgene | >SNUPN | chr15:75909749 | chr19:44768467 | ENST00000564644 | - | 4 | 10 | 208_328 | 101 | 361 | Region | Necessary for binding to the m3G-cap structure |
Hgene | >SNUPN | chr15:75909749 | chr19:44768467 | ENST00000564675 | - | 3 | 9 | 208_328 | 101 | 361 | Region | Necessary for binding to the m3G-cap structure |
Hgene | >SNUPN | chr15:75909749 | chr19:44768467 | ENST00000567134 | - | 4 | 10 | 208_328 | 101 | 361 | Region | Necessary for binding to the m3G-cap structure |
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FusionGeneSequence for SNUPN_ZNF233 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_SNUPN_ENST00000567134_chr15_75909749_-_ZNF233_ENST00000334152_chr19_44768467_+_666aa MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVNHARRLAEDDWTGMESEEENKKDDEEMDIDT VKKLPKHYANQFCLPRTLPFPRRSRRKXPSFSYWPXDXDYICLMLXEMVTFKDVAVVFTREELGLLDLAQRKLYQDVMLENFRNLLSVGY QPFKLDVILQLGKEDKLRMMETEIQGDGCSGKELLINMMIMEYTKERKLLATIIVEKTVXRNHPSIAXSNQESKPLMKMEKAXVLALILN FTSNYTXETSLMXMLSTGRAXVTAQGFPGISVSTXERNAIGMVTVVRASVRAHICNLIRESAQERTSTDVRYMPGAPTRTPVFPLMSLLT QERSCVHVAGVGRASIIAXILTFTVXTVLEREPVNVMYMIKASVRHHNFKPIREVTLETRHTNGKXVTGYLIGILVFTREFTLERNHINV RYVIRASVRPQIFKPIRESTLERNPTNVMCVIRTSAVIPTFRPIRESIQERNPTNVTHVGRTSVRSLIFRPIREFTKERSHTNVRHVGRA LVRVRISKTISKSILERIPTNVMCVGKASVGVHIFKPIRESTQERNHTNVKNVGKASSGTHIFMFIRGSTRERNPINVACVVRASVRLHI >In-frame_SNUPN_ENST00000564644_chr15_75909749_-_ZNF233_ENST00000334152_chr19_44768467_+_666aa MEELSQALASSFSVSQDLNSTAAPHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVNHARRLAEDDWTGMESEEENKKDDEEMDIDT VKKLPKHYANQFCLPRTLPFPRRSRRKXPSFSYWPXDXDYICLMLXEMVTFKDVAVVFTREELGLLDLAQRKLYQDVMLENFRNLLSVGY QPFKLDVILQLGKEDKLRMMETEIQGDGCSGKELLINMMIMEYTKERKLLATIIVEKTVXRNHPSIAXSNQESKPLMKMEKAXVLALILN FTSNYTXETSLMXMLSTGRAXVTAQGFPGISVSTXERNAIGMVTVVRASVRAHICNLIRESAQERTSTDVRYMPGAPTRTPVFPLMSLLT QERSCVHVAGVGRASIIAXILTFTVXTVLEREPVNVMYMIKASVRHHNFKPIREVTLETRHTNGKXVTGYLIGILVFTREFTLERNHINV RYVIRASVRPQIFKPIRESTLERNPTNVMCVIRTSAVIPTFRPIRESIQERNPTNVTHVGRTSVRSLIFRPIREFTKERSHTNVRHVGRA LVRVRISKTISKSILERIPTNVMCVGKASVGVHIFKPIRESTQERNHTNVKNVGKASSGTHIFMFIRGSTRERNPINVACVVRASVRLHI |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_SNUPN_ENST00000567134_chr15_75909749_-_ZNF233_ENST00000334152_chr19_44768467_+_2000nt ATGGAAGAGTTGAGTCAGGCCCTGGCTAGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCACAGCTGCCCCACACCCCCGCCTATCCCAG TACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTACTGGAACTGCAGAAATCCAAGCGGCTGGATTATGTGAAC CATGCCAGAAGACTGGCTGAAGATGACTGGACAGGGATGGAGAGTGAGGAAGAAAATAAGAAAGATGATGAAGAAATGGACATTGACACT GTCAAGAAGTTACCAAAACACTATGCTAATCAATTCTGCCTTCCCAGGACCCTGCCCTTCCCCAGAAGGAGCAGGAGAAAATGACCAAGT TTCAGTTATTGGCCATAAGATTGAGATTACATCTGCTTGATGTTGTAGGAGATGGTGACATTCAAGGATGTGGCTGTGGTCTTCACCAGG GAGGAGCTGGGGTTGCTGGACCTTGCCCAGAGAAAGCTGTACCAAGATGTGATGCTGGAGAACTTCAGGAACCTGCTGTCAGTGGGCTAT CAACCCTTCAAACTAGATGTGATATTACAGTTGGGAAAAGAAGACAAGCTTCGGATGATGGAGACAGAAATCCAAGGAGATGGGTGTTCA GGCAAAGAATTGCTCATCAACATGATGATCATGGAGTACACAAAAGAGAGAAAGCTTTTAGCCACAATAATTGTGGAAAAGACTGTGTGA AGGAATCATCCCAGCATAGCATAATCCAATCAGGAGAGCAAACCTCTGATGAAAATGGAAAAGGCTTAAGTGTTGGCTCTAATCTTGAAC TTCACCAGCAACTACACTTAAGAGACAAGCCTCATGTAAATGTTGAGTACGGGAAGGGCATAGGTTACAGCTCAGGGCTTCCCAGGCATC AGTGTTTCCACATAGGAGAGAAATGCTATAGGAATGGTGACAGTGGTGAGGGCTTCAGTCAGGGCTCACATCTGCAACCTCATCAGAGAG TCAGCACAGGAGAGAACCTCTACAGATGTCAGGTATATGCCCGGAGCTCCAACCAGAACTCCTGTCTTCCCTCTCATGAGCTTACTCACC CAGGAGAGAAGTTGTGTACATGTGGCAGGTGTGGGAAGGGCTTCCATCATAGCTTAGATTTTGACATTCACTGTGTAGACAGTGCTGGAG AGAGAGCCTGTAAATGTGATGTATATGATAAAGGCTTCAGTCAGACATCACAACTTCAAGCCCATCAGAGAGGTCACTCTAGAGACAAGA CATACAAATGGGAAGTAAGTGACAGGATATTTAATAGGAATTCTGGTCTTCACCAGAGAGTTCACACTGGAGAGAAACCATATAAATGTG AGGTATGTGATAAGGGCTTCAGTAAGGCCTCAAATCTTCAAGCCCATCAGAGAATCCACACTGGAGAGAAACCCTACAAATGTGATGTGT GTGATAAGAACTTCAGCCGTAATTCCCACCTTCAGGCCCATCAGAGAGTCCATACAGGAGAGAAACCCTACAAATGTGACACATGTGGGA AGGACTTCAGTCAGATCTCTCATCTTCAGGCCCATCAGAGAGTTCACAAAGGAGAGAAGCCATACAAATGTGAGACATGTGGGAAGGGCT TTAGTCAGAGTTCGCATCTCCAAGACCATCAGCAAGTCCATACTGGAGAGAATCCCTACAAATGTGATGTGTGTGGGAAAGGCTTCAGTT GGAGTTCACATCTTCAAGCCCATCAGAGAGTCCACACAGGAGAGAAACCATACAAATGTGAAGAATGTAGGAAAGGCTTCATCTGGAACT CATATCTTCATGTTCATCAGAGGATCCACACGGGAGAGAAACCCTATAAATGTGGCATGTGTGGTAAGAGCTTCAGTCAGACTTCACATC TTCAAGCCCATCAGAGAGTCCATACTGGAGAGAAACCATACAAATGTTTTGTGTGTGGTAAGGGCTTTAGTAAGAGTTCGTTGTCTTCAG >In-frame_SNUPN_ENST00000564644_chr15_75909749_-_ZNF233_ENST00000334152_chr19_44768467_+_2000nt ATGGAAGAGTTGAGTCAGGCCCTGGCTAGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCACAGCTGCCCCACACCCCCGCCTATCCCAG TACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTACTGGAACTGCAGAAATCCAAGCGGCTGGATTATGTGAAC CATGCCAGAAGACTGGCTGAAGATGACTGGACAGGGATGGAGAGTGAGGAAGAAAATAAGAAAGATGATGAAGAAATGGACATTGACACT GTCAAGAAGTTACCAAAACACTATGCTAATCAATTCTGCCTTCCCAGGACCCTGCCCTTCCCCAGAAGGAGCAGGAGAAAATGACCAAGT TTCAGTTATTGGCCATAAGATTGAGATTACATCTGCTTGATGTTGTAGGAGATGGTGACATTCAAGGATGTGGCTGTGGTCTTCACCAGG GAGGAGCTGGGGTTGCTGGACCTTGCCCAGAGAAAGCTGTACCAAGATGTGATGCTGGAGAACTTCAGGAACCTGCTGTCAGTGGGCTAT CAACCCTTCAAACTAGATGTGATATTACAGTTGGGAAAAGAAGACAAGCTTCGGATGATGGAGACAGAAATCCAAGGAGATGGGTGTTCA GGCAAAGAATTGCTCATCAACATGATGATCATGGAGTACACAAAAGAGAGAAAGCTTTTAGCCACAATAATTGTGGAAAAGACTGTGTGA AGGAATCATCCCAGCATAGCATAATCCAATCAGGAGAGCAAACCTCTGATGAAAATGGAAAAGGCTTAAGTGTTGGCTCTAATCTTGAAC TTCACCAGCAACTACACTTAAGAGACAAGCCTCATGTAAATGTTGAGTACGGGAAGGGCATAGGTTACAGCTCAGGGCTTCCCAGGCATC AGTGTTTCCACATAGGAGAGAAATGCTATAGGAATGGTGACAGTGGTGAGGGCTTCAGTCAGGGCTCACATCTGCAACCTCATCAGAGAG TCAGCACAGGAGAGAACCTCTACAGATGTCAGGTATATGCCCGGAGCTCCAACCAGAACTCCTGTCTTCCCTCTCATGAGCTTACTCACC CAGGAGAGAAGTTGTGTACATGTGGCAGGTGTGGGAAGGGCTTCCATCATAGCTTAGATTTTGACATTCACTGTGTAGACAGTGCTGGAG AGAGAGCCTGTAAATGTGATGTATATGATAAAGGCTTCAGTCAGACATCACAACTTCAAGCCCATCAGAGAGGTCACTCTAGAGACAAGA CATACAAATGGGAAGTAAGTGACAGGATATTTAATAGGAATTCTGGTCTTCACCAGAGAGTTCACACTGGAGAGAAACCATATAAATGTG AGGTATGTGATAAGGGCTTCAGTAAGGCCTCAAATCTTCAAGCCCATCAGAGAATCCACACTGGAGAGAAACCCTACAAATGTGATGTGT GTGATAAGAACTTCAGCCGTAATTCCCACCTTCAGGCCCATCAGAGAGTCCATACAGGAGAGAAACCCTACAAATGTGACACATGTGGGA AGGACTTCAGTCAGATCTCTCATCTTCAGGCCCATCAGAGAGTTCACAAAGGAGAGAAGCCATACAAATGTGAGACATGTGGGAAGGGCT TTAGTCAGAGTTCGCATCTCCAAGACCATCAGCAAGTCCATACTGGAGAGAATCCCTACAAATGTGATGTGTGTGGGAAAGGCTTCAGTT GGAGTTCACATCTTCAAGCCCATCAGAGAGTCCACACAGGAGAGAAACCATACAAATGTGAAGAATGTAGGAAAGGCTTCATCTGGAACT CATATCTTCATGTTCATCAGAGGATCCACACGGGAGAGAAACCCTATAAATGTGGCATGTGTGGTAAGAGCTTCAGTCAGACTTCACATC TTCAAGCCCATCAGAGAGTCCATACTGGAGAGAAACCATACAAATGTTTTGTGTGTGGTAAGGGCTTTAGTAAGAGTTCGTTGTCTTCAG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_SNUPN_ENST00000567134_chr15_75909749_-_ZNF233_ENST00000334152_chr19_44768467_+_2283nt GGCGCGAGGCCTGTGGGCCCAGCGGTGAGGCAGCAGCTGGGGGCGGGGGGAGGGCGGACCTAGCTTCCCAGGGCAGGTGATTCGTCGGCC CCGGTGGCGGCGGCGCGTGCGACGGTCACCTCGGTTTGGGGTCCACCTAAAGTGGGAAGTCTGTTTTCAAAATGACATCTACTCCATGCC TGTCTTGTTTCCCTAATGTACTTTATGGAAGTTCTTCACACTACTGGAGCATTGACGTTACTTGTTAAGCAGCCTTCCACATCCTAGCTC TTTTCCAAGGAAGATGGAAGAGTTGAGTCAGGCCCTGGCTAGTAGCTTTTCTGTGTCTCAAGATCTGAACAGCACAGCTGCCCCACACCC CCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTACTGGAACTGCAGAAATCCAAGCGGCT GGATTATGTGAACCATGCCAGAAGACTGGCTGAAGATGACTGGACAGGGATGGAGAGTGAGGAAGAAAATAAGAAAGATGATGAAGAAAT GGACATTGACACTGTCAAGAAGTTACCAAAACACTATGCTAATCAATTCTGCCTTCCCAGGACCCTGCCCTTCCCCAGAAGGAGCAGGAG AAAATGACCAAGTTTCAGTTATTGGCCATAAGATTGAGATTACATCTGCTTGATGTTGTAGGAGATGGTGACATTCAAGGATGTGGCTGT GGTCTTCACCAGGGAGGAGCTGGGGTTGCTGGACCTTGCCCAGAGAAAGCTGTACCAAGATGTGATGCTGGAGAACTTCAGGAACCTGCT GTCAGTGGGCTATCAACCCTTCAAACTAGATGTGATATTACAGTTGGGAAAAGAAGACAAGCTTCGGATGATGGAGACAGAAATCCAAGG AGATGGGTGTTCAGGCAAAGAATTGCTCATCAACATGATGATCATGGAGTACACAAAAGAGAGAAAGCTTTTAGCCACAATAATTGTGGA AAAGACTGTGTGAAGGAATCATCCCAGCATAGCATAATCCAATCAGGAGAGCAAACCTCTGATGAAAATGGAAAAGGCTTAAGTGTTGGC TCTAATCTTGAACTTCACCAGCAACTACACTTAAGAGACAAGCCTCATGTAAATGTTGAGTACGGGAAGGGCATAGGTTACAGCTCAGGG CTTCCCAGGCATCAGTGTTTCCACATAGGAGAGAAATGCTATAGGAATGGTGACAGTGGTGAGGGCTTCAGTCAGGGCTCACATCTGCAA CCTCATCAGAGAGTCAGCACAGGAGAGAACCTCTACAGATGTCAGGTATATGCCCGGAGCTCCAACCAGAACTCCTGTCTTCCCTCTCAT GAGCTTACTCACCCAGGAGAGAAGTTGTGTACATGTGGCAGGTGTGGGAAGGGCTTCCATCATAGCTTAGATTTTGACATTCACTGTGTA GACAGTGCTGGAGAGAGAGCCTGTAAATGTGATGTATATGATAAAGGCTTCAGTCAGACATCACAACTTCAAGCCCATCAGAGAGGTCAC TCTAGAGACAAGACATACAAATGGGAAGTAAGTGACAGGATATTTAATAGGAATTCTGGTCTTCACCAGAGAGTTCACACTGGAGAGAAA CCATATAAATGTGAGGTATGTGATAAGGGCTTCAGTAAGGCCTCAAATCTTCAAGCCCATCAGAGAATCCACACTGGAGAGAAACCCTAC AAATGTGATGTGTGTGATAAGAACTTCAGCCGTAATTCCCACCTTCAGGCCCATCAGAGAGTCCATACAGGAGAGAAACCCTACAAATGT GACACATGTGGGAAGGACTTCAGTCAGATCTCTCATCTTCAGGCCCATCAGAGAGTTCACAAAGGAGAGAAGCCATACAAATGTGAGACA TGTGGGAAGGGCTTTAGTCAGAGTTCGCATCTCCAAGACCATCAGCAAGTCCATACTGGAGAGAATCCCTACAAATGTGATGTGTGTGGG AAAGGCTTCAGTTGGAGTTCACATCTTCAAGCCCATCAGAGAGTCCACACAGGAGAGAAACCATACAAATGTGAAGAATGTAGGAAAGGC TTCATCTGGAACTCATATCTTCATGTTCATCAGAGGATCCACACGGGAGAGAAACCCTATAAATGTGGCATGTGTGGTAAGAGCTTCAGT CAGACTTCACATCTTCAAGCCCATCAGAGAGTCCATACTGGAGAGAAACCATACAAATGTTTTGTGTGTGGTAAGGGCTTTAGTAAGAGT >In-frame_SNUPN_ENST00000564644_chr15_75909749_-_ZNF233_ENST00000334152_chr19_44768467_+_2579nt GTGCGACGGTCACCTCGGTTTGGGTGAGTCCCTGGGTTCGAGCCCGGGCCCCGCCAGCTGCCGAGTTGCCTCTCGGTGCCGGACTGTGAC TCCCTCTGGCCGGCCCTGCACTCTGGCCTCCTGGGACGTCATCTGGAGGGATAGAGCCAGGCCTGGGACTCCTTTTGGGAGAGTTTCCGT TCTTCTATTCCGTGCTGTCCGGCCAGGACCCCTCAGGGACTTCTGTGGGGCAGGGGCGAATCATGCATGGCCTAGATGACCCCATGCCTA GAAAAAGGCAGTGCGGGGCGGTGGCGGCGCGCACGGCCGAGTGAAGCAGATAGCGTCCCCGGGGCTGGAGCCCGGTAGCAGGGCCGGGCG TTGTGGCGCGTGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAATCCGGGAGATGGAGGTTGCAGTGAGCCGAG ATCATGCCACTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCTGTCTCAAAAAAAAAACAACAACAACAAAGAAAAAACAAAACGAAAC AGCAGGAACCCGCCAAGAACAGCCTTGAAGGAAGGGAAGATGGAAGAGTTGAGTCAGGCCCTGGCTAGTAGCTTTTCTGTGTCTCAAGAT CTGAACAGCACAGCTGCCCCACACCCCCGCCTATCCCAGTACAAGTCCAAGTACAGTTCCTTGGAGCAGAGTGAGCGCCGCCGGAGGTTA CTGGAACTGCAGAAATCCAAGCGGCTGGATTATGTGAACCATGCCAGAAGACTGGCTGAAGATGACTGGACAGGGATGGAGAGTGAGGAA GAAAATAAGAAAGATGATGAAGAAATGGACATTGACACTGTCAAGAAGTTACCAAAACACTATGCTAATCAATTCTGCCTTCCCAGGACC CTGCCCTTCCCCAGAAGGAGCAGGAGAAAATGACCAAGTTTCAGTTATTGGCCATAAGATTGAGATTACATCTGCTTGATGTTGTAGGAG ATGGTGACATTCAAGGATGTGGCTGTGGTCTTCACCAGGGAGGAGCTGGGGTTGCTGGACCTTGCCCAGAGAAAGCTGTACCAAGATGTG ATGCTGGAGAACTTCAGGAACCTGCTGTCAGTGGGCTATCAACCCTTCAAACTAGATGTGATATTACAGTTGGGAAAAGAAGACAAGCTT CGGATGATGGAGACAGAAATCCAAGGAGATGGGTGTTCAGGCAAAGAATTGCTCATCAACATGATGATCATGGAGTACACAAAAGAGAGA AAGCTTTTAGCCACAATAATTGTGGAAAAGACTGTGTGAAGGAATCATCCCAGCATAGCATAATCCAATCAGGAGAGCAAACCTCTGATG AAAATGGAAAAGGCTTAAGTGTTGGCTCTAATCTTGAACTTCACCAGCAACTACACTTAAGAGACAAGCCTCATGTAAATGTTGAGTACG GGAAGGGCATAGGTTACAGCTCAGGGCTTCCCAGGCATCAGTGTTTCCACATAGGAGAGAAATGCTATAGGAATGGTGACAGTGGTGAGG GCTTCAGTCAGGGCTCACATCTGCAACCTCATCAGAGAGTCAGCACAGGAGAGAACCTCTACAGATGTCAGGTATATGCCCGGAGCTCCA ACCAGAACTCCTGTCTTCCCTCTCATGAGCTTACTCACCCAGGAGAGAAGTTGTGTACATGTGGCAGGTGTGGGAAGGGCTTCCATCATA GCTTAGATTTTGACATTCACTGTGTAGACAGTGCTGGAGAGAGAGCCTGTAAATGTGATGTATATGATAAAGGCTTCAGTCAGACATCAC AACTTCAAGCCCATCAGAGAGGTCACTCTAGAGACAAGACATACAAATGGGAAGTAAGTGACAGGATATTTAATAGGAATTCTGGTCTTC ACCAGAGAGTTCACACTGGAGAGAAACCATATAAATGTGAGGTATGTGATAAGGGCTTCAGTAAGGCCTCAAATCTTCAAGCCCATCAGA GAATCCACACTGGAGAGAAACCCTACAAATGTGATGTGTGTGATAAGAACTTCAGCCGTAATTCCCACCTTCAGGCCCATCAGAGAGTCC ATACAGGAGAGAAACCCTACAAATGTGACACATGTGGGAAGGACTTCAGTCAGATCTCTCATCTTCAGGCCCATCAGAGAGTTCACAAAG GAGAGAAGCCATACAAATGTGAGACATGTGGGAAGGGCTTTAGTCAGAGTTCGCATCTCCAAGACCATCAGCAAGTCCATACTGGAGAGA ATCCCTACAAATGTGATGTGTGTGGGAAAGGCTTCAGTTGGAGTTCACATCTTCAAGCCCATCAGAGAGTCCACACAGGAGAGAAACCAT ACAAATGTGAAGAATGTAGGAAAGGCTTCATCTGGAACTCATATCTTCATGTTCATCAGAGGATCCACACGGGAGAGAAACCCTATAAAT GTGGCATGTGTGGTAAGAGCTTCAGTCAGACTTCACATCTTCAAGCCCATCAGAGAGTCCATACTGGAGAGAAACCATACAAATGTTTTG |
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FusionGenePPI for SNUPN_ZNF233 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SNUPN | TNNT3, ENO2, PEX5, SMN1, DDX20, SNRPB, ZPR1, RAN, XPO1, KPNB1, DBN1, MEX3B, RNF126, GCNT3, HOTAIR, SNRPA1, PDP1, TOE1, EGLN1, USP15, SNRPD1, PPP1R8, XRCC5, YEATS4, SLC33A1, SNW1, SNRPE, SNRPN | ZNF233 | CACNA1A |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000308588 | - | 3 | 9 | 127_129 | 101 | 361 | m3G-cap structure |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000564644 | - | 4 | 10 | 127_129 | 101 | 361 | m3G-cap structure |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000564675 | - | 3 | 9 | 127_129 | 101 | 361 | m3G-cap structure |
Hgene | SNUPN | chr15:75909749 | chr19:44768467 | ENST00000567134 | - | 4 | 10 | 127_129 | 101 | 361 | m3G-cap structure |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SNUPN_ZNF233 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SNUPN_ZNF233 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |