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Fusion gene ID: 35073 |
FusionGeneSummary for SNAPIN_FMNL1 |
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Fusion gene information | Fusion gene name: SNAPIN_FMNL1 | Fusion gene ID: 35073 | Hgene | Tgene | Gene symbol | SNAPIN | FMNL1 | Gene ID | 23557 | 752 |
Gene name | SNAP associated protein | formin like 1 | |
Synonyms | BLOC1S7|BLOS7|BORCS3|SNAPAP | C17orf1|C17orf1B|FHOD4|FMNL|KW-13 | |
Cytomap | 1q21.3 | 17q21.31 | |
Type of gene | protein-coding | protein-coding | |
Description | SNARE-associated protein SnapinBLOC-1 subunit 7SNAP-25-binding proteinSNARE associated protein snapinbiogenesis of lysosomal organelles complex-1, subunit 7biogenesis of lysosome-related organelles complex 1 subunit 7synaptosomal-associated protein | formin-like protein 1CLL-associated antigen KW-13leukocyte formin | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | O95295 | O95466 | |
Ensembl transtripts involved in fusion gene | ENST00000368685, ENST00000478558, | ENST00000331495, ENST00000328118, ENST00000592006, ENST00000587489, | |
Fusion gene scores | * DoF score | 2 X 1 X 2=4 | 4 X 4 X 3=48 |
# samples | 2 | 4 | |
** MAII score | log2(2/4*10)=2.32192809488736 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: SNAPIN [Title/Abstract] AND FMNL1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SNAPIN | GO:0016079 | synaptic vesicle exocytosis | 10195194 |
![]() (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | ESCA | TCGA-R6-A8W5-01B | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000368685 | ENST00000331495 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
In-frame | ENST00000368685 | ENST00000328118 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
5CDS-intron | ENST00000368685 | ENST00000592006 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
5CDS-intron | ENST00000368685 | ENST00000587489 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
3UTR-3CDS | ENST00000478558 | ENST00000331495 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
3UTR-3CDS | ENST00000478558 | ENST00000328118 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
3UTR-intron | ENST00000478558 | ENST00000592006 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
3UTR-intron | ENST00000478558 | ENST00000587489 | SNAPIN | chr1 | 153632042 | + | FMNL1 | chr17 | 43317843 | + |
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FusionProtFeatures for SNAPIN_FMNL1 |
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Hgene | Tgene |
SNAPIN | FMNL1 |
Component of the BLOC-1 complex, a complex that isrequired for normal biogenesis of lysosome-related organelles(LRO), such as platelet dense granules and melanosomes. In concertwith the AP-3 complex, the BLOC-1 complex is required to targetmembrane protein cargos into vesicles assembled at cell bodies fordelivery into neurites and nerve terminals. The BLOC-1 complex, inassociation with SNARE proteins, is also proposed to be involvedin neurite extension. Plays a role in intracellular vesicletrafficking and synaptic vesicle recycling. May modulate a stepbetween vesicle priming, fusion and calcium-dependentneurotransmitter release through its ability to potentiate theinteraction of synaptotagmin with the SNAREs and the plasma-membrane-associated protein SNAP25. Its phosphorylation stateinfluences exocytotic protein interactions and may regulatesynaptic vesicle exocytosis. May also have a role in themechanisms of SNARE-mediated membrane fusion in non-neuronal cells(PubMed:17182842, PubMed:18167355). As part of the BORC complexmay play a role in lysosomes movement and localization at the cellperiphery. Associated with the cytosolic face of lysosomes, theBORC complex may recruit ARL8B and couple lysosomes to microtubuleplus-end-directed kinesin motor (PubMed:25898167).{ECO:0000269|PubMed:17182842, ECO:0000269|PubMed:18167355,ECO:0000269|PubMed:25898167}. | May play a role in the control of cell motility andsurvival of macrophages (By similarity). Plays a role in theregulation of cell morphology and cytoskeletal organization.Required in the cortical actin filament dynamics and cell shape.{ECO:0000250, ECO:0000269|PubMed:21834987}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000328118 | + | 10 | 26 | 459_616 | 360 | 1105 | Compositional bias | Note=Pro-rich |
Tgene | >FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000331495 | + | 10 | 27 | 459_616 | 360 | 1097 | Compositional bias | Note=Pro-rich |
Tgene | >FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000328118 | + | 10 | 26 | 1059_1090 | 360 | 1105 | Domain | DAD |
Tgene | >FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000328118 | + | 10 | 26 | 632_1023 | 360 | 1105 | Domain | FH2 |
Tgene | >FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000331495 | + | 10 | 27 | 1059_1090 | 360 | 1097 | Domain | DAD |
Tgene | >FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000331495 | + | 10 | 27 | 632_1023 | 360 | 1097 | Domain | FH2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >SNAPIN | chr1:153632042 | chr17:43317843 | ENST00000368685 | + | 3 | 4 | 37_126 | 103 | 137 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000328118 | + | 10 | 26 | 27_468 | 360 | 1105 | Domain | GBD/FH3 |
Tgene | FMNL1 | chr1:153632042 | chr17:43317843 | ENST00000331495 | + | 10 | 27 | 27_468 | 360 | 1097 | Domain | GBD/FH3 |
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FusionGeneSequence for SNAPIN_FMNL1 |
![]() (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_SNAPIN_ENST00000368685_chr1_153632042_+_FMNL1_ENST00000331495_chr17_43317843_+_844aa MAGAGSAAVSGAGTPVAGPTGRDLFAEGLLEFLRPAVQQLDSHVHAVRESQVELREQIDNLATELCRINEDQKVALDLDPYVKKLLNARR RVVLVNNILQNAQRLRLTESDKLQVQIQAYLDNIFDVGALLEDTETKNAVLEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQAR KELETLRERFSESTAMGPSRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEILPVAVATPSGGDAPTPGVPTGSPS PDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPD ALGRRDSELGPGVKAKKPIQTKFRMPLLNWVALKPSQITGTVFTELNDEKVLQELDMSDFEEQFKTKSQGPSLDLSALKSKAAQKAPSKA TLIEANRAKNLAITLRKGNLGAERICQAIEAYDLQALGLDFLELLMRFLPTEYERSLITRFEREQRPMEELSEEDRFMLCFSRIPRLPER MTTLTFLGNFPDTAQLLMPQLNAIIAASMSIKSSDKLRQILEIVLAFGNYMNSSKRGAAYGFRLQSLDALLEMKSTDRKQTLLHYLVKVI AEKYPQLTGFHSDLHFLDKAGSVSLDSVLADVRSLQRGLELTQREFVRQDDCMVLKEFLRANSPTMDKLLADSKTAQEAFESVVEYFGEN PKTTSPGLFFSLFSRFIKAYKKAEQEVEQWKKEAAAQEAGADTPGKGEPPAPKSPPKARRPQMDLISELKRRQQKEPLIYESDRDGAIED >In-frame_SNAPIN_ENST00000368685_chr1_153632042_+_FMNL1_ENST00000328118_chr17_43317843_+_848aa MAGAGSAAVSGAGTPVAGPTGRDLFAEGLLEFLRPAVQQLDSHVHAVRESQVELREQIDNLATELCRINEDQKVALDLDPYVKKLLNARR RVVLVNNILQNAQRLRLTESDKLQVQIQAYLDNIFDVGALLEDTETKNAVLEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQAR KELETLRERFSESTAMGPSRRPPEPEKAPPAAPTRPSALELKVEELEEKGLIRILRGPGDAVSIEILPVAVATPSGGDAPTPGVPTGSPS PDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPD ALGRRDSELGPGVKAKKPIQTKFRMPLLNWVALKPSQITGTVFTELNDEKVLQELDMSDFEEQFKTKSQGPSLDLSALKSKAAQKAPSKA TLIEANRAKNLAITLRKGNLGAERICQAIEAYDLQALGLDFLELLMRFLPTEYERSLITRFEREQRPMEELSEEDRFMLCFSRIPRLPER MTTLTFLGNFPDTAQLLMPQLNAIIAASMSIKSSDKLRQILEIVLAFGNYMNSSKRGAAYGFRLQSLDALLEMKSTDRKQTLLHYLVKVI AEKYPQLTGFHSDLHFLDKAGSVSLDSVLADVRSLQRGLELTQREFVRQDDCMVLKEFLRANSPTMDKLLADSKTAQEAFESVVEYFGEN PKTTSPGLFFSLFSRFIKAYKKAEQEVEQWKKEAAAQEAGADTPGKGEPPAPKSPPKARRPQMDLISELKRRQQKEPLIYESDRDGAIED |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_SNAPIN_ENST00000368685_chr1_153632042_+_FMNL1_ENST00000331495_chr17_43317843_+_2532nt ATGGCGGGGGCTGGTTCCGCCGCTGTATCGGGGGCAGGGACCCCGGTGGCGGGGCCCACAGGCCGCGACCTTTTCGCCGAAGGGCTGCTG GAGTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAAC CTAGCCACAGAACTGTGCCGCATAAATGAGGATCAGAAGGTGGCCCTGGATCTTGACCCCTATGTTAAGAAGCTACTTAATGCCCGGCGA CGCGTTGTCTTGGTTAACAACATTCTACAGAATGCTCAGAGGCTTCGGCTCACCGAGAGTGACAAGCTGCAGGTGCAGATCCAGGCGTAC CTGGACAATATTTTTGATGTGGGGGCGCTGCTGGAGGACACAGAGACCAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCAGGAGCAA GTGGCGCTGCTGACAGAGCGGCTTCGGGACGCGGAGAACGAATCCATGGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGC AAGGAGTTGGAGACCCTGCGGGAGCGCTTCAGCGAATCGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGCCTGAGAAAGCGCCTCCC GCTGCCCCGACGCGGCCCTCGGCCCTGGAGCTGAAGGTGGAGGAGCTGGAGGAGAAGGGGTTAATCCGTATTCTGCGGGGGCCGGGGGAT GCTGTCTCCATCGAGATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTGATGCTCCGACTCCGGGGGTGCCGACCGGCTCCCCCAGC CCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCAGCGCCACCGCCGCCGCCCCCACTGCCCGGCCTCCCCTCCCCGCAGGAAGCC CCGCCCTCTGCGCCCCCACAGGCCCCGCCTCTCCCTGGCAGCCCGGAGCCCCCGCCTGCGCCGCCGCTGCCCGGAGACCTGCCGCCCCCA CCCCCGCCACCGCCACCACCTCCGGGCACTGACGGGCCGGTGCCTCCGCCGCCGCCGCCGCCGCCGCCGCCTCCCGGAGGTCCTCCTGAT GCCCTAGGAAGACGCGACTCAGAATTGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAATGCCACTCTTGAACTGG GTGGCACTGAAACCCAGCCAGATCACCGGCACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCTGCAGGAGCTAGACATGAGTGATTTT GAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAGCCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCG ACACTCATTGAGGCCAACCGGGCCAAGAACTTGGCCATCACCCTGCGGAAGGGCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTGAG GCGTACGACCTGCAGGCTCTGGGCCTGGACTTCCTGGAGCTGCTGATGCGCTTCCTGCCCACAGAGTATGAGCGCAGCCTCATCACCCGC TTTGAGCGGGAGCAGCGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTCATGCTATGCTTCAGCCGCATCCCGCGCCTGCCGGAGCGC ATGACCACACTCACCTTCCTGGGCAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCAACTGAATGCCATCATTGCAGCCTCAATGTCC ATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGTCCTGGCCTTTGGCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCTAT GGCTTCCGGCTCCAGAGCCTGGATGCGCTGTTGGAGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCACTACCTGGTGAAGGTCATT GCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTCCCTGGACAGTGTCCTGGCG GACGTGCGCTCCCTGCAGCGAGGCCTAGAGTTGACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGG GCCAACTCGCCCACCATGGACAAGCTGCTGGCAGACAGCAAGACGGCTCAGGAGGCCTTTGAGTCTGTGGTGGAGTACTTCGGAGAGAAC CCCAAGACCACATCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAGGTGGAACAGTGG AAAAAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGG CCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACCGTGATGGGGCCATTGAAGAC ATCATCACAGTGATCAAGACGGTGCCCTTCACGGCCCGCACCGGCAAGCGGACATCCCGGCTCCTCTGTGAGGCCAGCCTGGGAGAAGAG >In-frame_SNAPIN_ENST00000368685_chr1_153632042_+_FMNL1_ENST00000328118_chr17_43317843_+_2544nt ATGGCGGGGGCTGGTTCCGCCGCTGTATCGGGGGCAGGGACCCCGGTGGCGGGGCCCACAGGCCGCGACCTTTTCGCCGAAGGGCTGCTG GAGTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAAC CTAGCCACAGAACTGTGCCGCATAAATGAGGATCAGAAGGTGGCCCTGGATCTTGACCCCTATGTTAAGAAGCTACTTAATGCCCGGCGA CGCGTTGTCTTGGTTAACAACATTCTACAGAATGCTCAGAGGCTTCGGCTCACCGAGAGTGACAAGCTGCAGGTGCAGATCCAGGCGTAC CTGGACAATATTTTTGATGTGGGGGCGCTGCTGGAGGACACAGAGACCAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCAGGAGCAA GTGGCGCTGCTGACAGAGCGGCTTCGGGACGCGGAGAACGAATCCATGGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGC AAGGAGTTGGAGACCCTGCGGGAGCGCTTCAGCGAATCGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGCCTGAGAAAGCGCCTCCC GCTGCCCCGACGCGGCCCTCGGCCCTGGAGCTGAAGGTGGAGGAGCTGGAGGAGAAGGGGTTAATCCGTATTCTGCGGGGGCCGGGGGAT GCTGTCTCCATCGAGATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTGATGCTCCGACTCCGGGGGTGCCGACCGGCTCCCCCAGC CCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCAGCGCCACCGCCGCCGCCCCCACTGCCCGGCCTCCCCTCCCCGCAGGAAGCC CCGCCCTCTGCGCCCCCACAGGCCCCGCCTCTCCCTGGCAGCCCGGAGCCCCCGCCTGCGCCGCCGCTGCCCGGAGACCTGCCGCCCCCA CCCCCGCCACCGCCACCACCTCCGGGCACTGACGGGCCGGTGCCTCCGCCGCCGCCGCCGCCGCCGCCGCCTCCCGGAGGTCCTCCTGAT GCCCTAGGAAGACGCGACTCAGAATTGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAATGCCACTCTTGAACTGG GTGGCACTGAAACCCAGCCAGATCACCGGCACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCTGCAGGAGCTAGACATGAGTGATTTT GAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAGCCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCG ACACTCATTGAGGCCAACCGGGCCAAGAACTTGGCCATCACCCTGCGGAAGGGCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTGAG GCGTACGACCTGCAGGCTCTGGGCCTGGACTTCCTGGAGCTGCTGATGCGCTTCCTGCCCACAGAGTATGAGCGCAGCCTCATCACCCGC TTTGAGCGGGAGCAGCGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTCATGCTATGCTTCAGCCGCATCCCGCGCCTGCCGGAGCGC ATGACCACACTCACCTTCCTGGGCAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCAACTGAATGCCATCATTGCAGCCTCAATGTCC ATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGTCCTGGCCTTTGGCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCTAT GGCTTCCGGCTCCAGAGCCTGGATGCGCTGTTGGAGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCACTACCTGGTGAAGGTCATT GCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTCCCTGGACAGTGTCCTGGCG GACGTGCGCTCCCTGCAGCGAGGCCTAGAGTTGACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGG GCCAACTCGCCCACCATGGACAAGCTGCTGGCAGACAGCAAGACGGCTCAGGAGGCCTTTGAGTCTGTGGTGGAGTACTTCGGAGAGAAC CCCAAGACCACATCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAGGTGGAACAGTGG AAAAAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGG CCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACCGTGATGGGGCCATTGAAGAC ATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGGGCCCCCCACTGCAG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_SNAPIN_ENST00000368685_chr1_153632042_+_FMNL1_ENST00000331495_chr17_43317843_+_3084nt CGGGCGCCCCCTCACGGGGCGGGGCAGTGCGGCGCGGCTCCGGTTCCCGGCGGCCCTCGCGGCAGGTTTCGGGCTTCAGGACAATTCGTG ATGGCGGGGGCTGGTTCCGCCGCTGTATCGGGGGCAGGGACCCCGGTGGCGGGGCCCACAGGCCGCGACCTTTTCGCCGAAGGGCTGCTG GAGTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAAC CTAGCCACAGAACTGTGCCGCATAAATGAGGATCAGAAGGTGGCCCTGGATCTTGACCCCTATGTTAAGAAGCTACTTAATGCCCGGCGA CGCGTTGTCTTGGTTAACAACATTCTACAGAATGCTCAGAGGCTTCGGCTCACCGAGAGTGACAAGCTGCAGGTGCAGATCCAGGCGTAC CTGGACAATATTTTTGATGTGGGGGCGCTGCTGGAGGACACAGAGACCAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCAGGAGCAA GTGGCGCTGCTGACAGAGCGGCTTCGGGACGCGGAGAACGAATCCATGGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGC AAGGAGTTGGAGACCCTGCGGGAGCGCTTCAGCGAATCGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGCCTGAGAAAGCGCCTCCC GCTGCCCCGACGCGGCCCTCGGCCCTGGAGCTGAAGGTGGAGGAGCTGGAGGAGAAGGGGTTAATCCGTATTCTGCGGGGGCCGGGGGAT GCTGTCTCCATCGAGATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTGATGCTCCGACTCCGGGGGTGCCGACCGGCTCCCCCAGC CCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCAGCGCCACCGCCGCCGCCCCCACTGCCCGGCCTCCCCTCCCCGCAGGAAGCC CCGCCCTCTGCGCCCCCACAGGCCCCGCCTCTCCCTGGCAGCCCGGAGCCCCCGCCTGCGCCGCCGCTGCCCGGAGACCTGCCGCCCCCA CCCCCGCCACCGCCACCACCTCCGGGCACTGACGGGCCGGTGCCTCCGCCGCCGCCGCCGCCGCCGCCGCCTCCCGGAGGTCCTCCTGAT GCCCTAGGAAGACGCGACTCAGAATTGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAATGCCACTCTTGAACTGG GTGGCACTGAAACCCAGCCAGATCACCGGCACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCTGCAGGAGCTAGACATGAGTGATTTT GAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAGCCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCG ACACTCATTGAGGCCAACCGGGCCAAGAACTTGGCCATCACCCTGCGGAAGGGCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTGAG GCGTACGACCTGCAGGCTCTGGGCCTGGACTTCCTGGAGCTGCTGATGCGCTTCCTGCCCACAGAGTATGAGCGCAGCCTCATCACCCGC TTTGAGCGGGAGCAGCGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTCATGCTATGCTTCAGCCGCATCCCGCGCCTGCCGGAGCGC ATGACCACACTCACCTTCCTGGGCAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCAACTGAATGCCATCATTGCAGCCTCAATGTCC ATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGTCCTGGCCTTTGGCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCTAT GGCTTCCGGCTCCAGAGCCTGGATGCGCTGTTGGAGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCACTACCTGGTGAAGGTCATT GCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTCCCTGGACAGTGTCCTGGCG GACGTGCGCTCCCTGCAGCGAGGCCTAGAGTTGACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGG GCCAACTCGCCCACCATGGACAAGCTGCTGGCAGACAGCAAGACGGCTCAGGAGGCCTTTGAGTCTGTGGTGGAGTACTTCGGAGAGAAC CCCAAGACCACATCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAGGTGGAACAGTGG AAAAAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGG CCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACCGTGATGGGGCCATTGAAGAC ATCATCACAGTGATCAAGACGGTGCCCTTCACGGCCCGCACCGGCAAGCGGACATCCCGGCTCCTCTGTGAGGCCAGCCTGGGAGAAGAG ATGCCCCTCTAGCCCCTCAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGGGCCC CCCACTGCAGGTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACAGGCTGAGGC TCAAGGAAGGTGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGC CACAGAGGGCAGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCA GCAGGAGCCTGGCCTGTAACTTATAAAGTGCACCTCGCCCCCGCAAGCCCCAGCCCCGAGGACCGTCCATGGACCTTATTTTTATATGAG >In-frame_SNAPIN_ENST00000368685_chr1_153632042_+_FMNL1_ENST00000328118_chr17_43317843_+_2978nt CGGGCGCCCCCTCACGGGGCGGGGCAGTGCGGCGCGGCTCCGGTTCCCGGCGGCCCTCGCGGCAGGTTTCGGGCTTCAGGACAATTCGTG ATGGCGGGGGCTGGTTCCGCCGCTGTATCGGGGGCAGGGACCCCGGTGGCGGGGCCCACAGGCCGCGACCTTTTCGCCGAAGGGCTGCTG GAGTTCCTGCGACCCGCTGTGCAGCAGCTCGACTCTCACGTACACGCCGTCAGAGAGAGCCAGGTAGAGCTCCGGGAACAAATTGACAAC CTAGCCACAGAACTGTGCCGCATAAATGAGGATCAGAAGGTGGCCCTGGATCTTGACCCCTATGTTAAGAAGCTACTTAATGCCCGGCGA CGCGTTGTCTTGGTTAACAACATTCTACAGAATGCTCAGAGGCTTCGGCTCACCGAGAGTGACAAGCTGCAGGTGCAGATCCAGGCGTAC CTGGACAATATTTTTGATGTGGGGGCGCTGCTGGAGGACACAGAGACCAAGAACGCTGTGCTGGAGCACATGGAGGAACTGCAGGAGCAA GTGGCGCTGCTGACAGAGCGGCTTCGGGACGCGGAGAACGAATCCATGGCCAAGATTGCAGAACTGGAAAAACAGCTAAGCCAGGCGCGC AAGGAGTTGGAGACCCTGCGGGAGCGCTTCAGCGAATCGACCGCCATGGGGCCCTCCAGGCGTCCCCCAGAGCCTGAGAAAGCGCCTCCC GCTGCCCCGACGCGGCCCTCGGCCCTGGAGCTGAAGGTGGAGGAGCTGGAGGAGAAGGGGTTAATCCGTATTCTGCGGGGGCCGGGGGAT GCTGTCTCCATCGAGATCCTCCCCGTCGCTGTGGCAACTCCGAGCGGCGGTGATGCTCCGACTCCGGGGGTGCCGACCGGCTCCCCCAGC CCAGATCTCGCACCTGCAGCAGAGCCGGCTCCCGGAGCAGCGCCACCGCCGCCGCCCCCACTGCCCGGCCTCCCCTCCCCGCAGGAAGCC CCGCCCTCTGCGCCCCCACAGGCCCCGCCTCTCCCTGGCAGCCCGGAGCCCCCGCCTGCGCCGCCGCTGCCCGGAGACCTGCCGCCCCCA CCCCCGCCACCGCCACCACCTCCGGGCACTGACGGGCCGGTGCCTCCGCCGCCGCCGCCGCCGCCGCCGCCTCCCGGAGGTCCTCCTGAT GCCCTAGGAAGACGCGACTCAGAATTGGGCCCAGGAGTGAAGGCCAAGAAGCCCATCCAGACTAAGTTCCGAATGCCACTCTTGAACTGG GTGGCACTGAAACCCAGCCAGATCACCGGCACTGTCTTCACAGAGCTCAATGATGAGAAGGTGCTGCAGGAGCTAGACATGAGTGATTTT GAGGAACAGTTCAAGACCAAGTCCCAAGGCCCCAGCCTGGACCTCAGCGCTCTCAAGAGTAAGGCAGCCCAGAAGGCCCCCAGCAAGGCG ACACTCATTGAGGCCAACCGGGCCAAGAACTTGGCCATCACCCTGCGGAAGGGCAACCTGGGGGCCGAGCGCATCTGCCAAGCCATTGAG GCGTACGACCTGCAGGCTCTGGGCCTGGACTTCCTGGAGCTGCTGATGCGCTTCCTGCCCACAGAGTATGAGCGCAGCCTCATCACCCGC TTTGAGCGGGAGCAGCGGCCAATGGAGGAGCTGTCAGAGGAGGACCGCTTCATGCTATGCTTCAGCCGCATCCCGCGCCTGCCGGAGCGC ATGACCACACTCACCTTCCTGGGCAACTTCCCGGACACAGCCCAGCTGCTCATGCCGCAACTGAATGCCATCATTGCAGCCTCAATGTCC ATCAAGTCCTCTGACAAACTCCGCCAGATCCTGGAGATTGTCCTGGCCTTTGGCAACTACATGAACAGTAGCAAGCGTGGGGCAGCCTAT GGCTTCCGGCTCCAGAGCCTGGATGCGCTGTTGGAGATGAAGTCGACTGATCGCAAGCAGACGCTGCTGCACTACCTGGTGAAGGTCATT GCTGAGAAGTACCCGCAACTCACAGGCTTCCACAGCGACCTGCACTTCCTGGACAAGGCGGGCTCAGTGTCCCTGGACAGTGTCCTGGCG GACGTGCGCTCCCTGCAGCGAGGCCTAGAGTTGACACAGAGAGAGTTTGTGCGGCAGGATGACTGCATGGTGCTCAAGGAGTTCCTGAGG GCCAACTCGCCCACCATGGACAAGCTGCTGGCAGACAGCAAGACGGCTCAGGAGGCCTTTGAGTCTGTGGTGGAGTACTTCGGAGAGAAC CCCAAGACCACATCCCCAGGCCTGTTCTTCTCCCTCTTTAGCCGCTTCATTAAGGCCTACAAGAAAGCTGAGCAGGAGGTGGAACAGTGG AAAAAAGAAGCCGCTGCCCAGGAGGCAGGCGCTGATACCCCGGGCAAAGGGGAGCCCCCAGCACCCAAGTCACCGCCAAAGGCCCGGCGG CCACAGATGGACCTCATCTCTGAGCTGAAACGGAGGCAGCAGAAGGAGCCACTCATTTATGAGAGCGACCGTGATGGGGCCATTGAAGAC ATCATCACAGATCTGCGGAACCAGCCCTACATCCGCGCAGACACAGGCCGCCGCAGTGCCCGTCGGCGTCCCCCGGGCCCCCCACTGCAG GTCACCTCCGACCTCTCGCTGTAGCCGCTATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACAGGCTGAGGCTCAAGGAAGG TGGTCCTCAGCTCGGCTGGCCGGGCAGCCCCTCCTCCGCTGTGGCCCGCCTCAAACGGGCTGGTGCATCCTCCTCTTGGCCACAGAGGGC AGCATCGCCCGCCCCTTCCCCCAAATGCTGCTTGCAGCACCCACCCTAAAGCCCCCTCCAAATAGCCATACTTAGCCTCAGCAGGAGCCT GGCCTGTAACTTATAAAGTGCACCTCGCCCCCGCAAGCCCCAGCCCCGAGGACCGTCCATGGACCTTATTTTTATATGAGATTAATAAAG |
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FusionGenePPI for SNAPIN_FMNL1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SNAPIN | SNAP23, BLOC1S6, DTNBP1, BLOC1S2, BLOC1S3, BLOC1S4, BLOC1S1, TRPV1, RGS7, LAMC1, GPRASP1, KIF5C, SPAG5, EEF1G, HAP1, KAT5, IMMT, KAT7, DDR1, IKBKAP, SNAP25, MAPK14, SPP1, RNF13, TOR1A, COPS4, SMAD2, BNIPL, TEX35, CEP170, TMEM171, CCDC151, C17orf59, BCAS4, HERC2, SCLT1, CEP170P1, TRIM69, EXOC1, KLC1, SCOC, TCP10L, TSKS, COG6, SYBU, IKBIP, TRAK2, TRIML2, MTNR1A | FMNL1 | XRCC6, RAC1, PFN1, PFN2, APP, AHNAK, FMNL1, ARHGAP4, CWF19L1, PARP1, HSP90B1, FLI1, LSP1, SIPA1, ARHGAP17, PLEC, TIA1, GEMIN5, FLII, LIMA1, MTCH2, PPP1R12A, RALY, NPM1, STOM, SUPT16H, TAP2, CHCHD3, TOMM40, COPB1, LMO7, HSPA5, FLNB, CAP1, ABCF1, ATP5B, MS4A1, XRCC5, KCTD10, VDAC1, ACTN4, TUFM, ZNF787, CORO1C, HSPA1B, ATAD3A, CD44, SSRP1, OTUD4, SIPA1L3, ABCB8, CORO1A, TMPO, PHB2, NUFIP2, RPL11, PRPF40A, MMS19, STRN3, TCERG1, GAS7, HMG20A, SRPK2, THOC5, POLR3E, ACTR5, PPP1R10, HEY1 |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | SNAPIN | chr1:153632042 | chr17:43317843 | ENST00000368685 | + | 3 | 4 | 83_136 | 103 | 137 | TOR1A |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SNAPIN_FMNL1 |
![]() (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SNAPIN_FMNL1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | FMNL1 | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |