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Fusion gene ID: 3496 |
FusionGeneSummary for ATP8A1_CRMP1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: ATP8A1_CRMP1 | Fusion gene ID: 3496 | Hgene | Tgene | Gene symbol | ATP8A1 | CRMP1 | Gene ID | 10396 | 1400 |
| Gene name | ATPase phospholipid transporting 8A1 | collapsin response mediator protein 1 | |
| Synonyms | ATPASEII|ATPIA|ATPP2 | CRMP-1|DPYSL1|DRP-1|DRP1|ULIP-3 | |
| Cytomap | 4p13 | 4p16.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | phospholipid-transporting ATPase IAATPase IIATPase class I type 8A member 1ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1P4-ATPase flippase complex alpha subunit ATP8A1aminophospholipid translocasechromaffin granule ATPase | dihydropyrimidinase-related protein 1dihydropyrimidinase-like 1unc-33-like phosphoprotein 3 | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | Q9Y2Q0 | Q14194 | |
| Ensembl transtripts involved in fusion gene | ENST00000381668, ENST00000264449, ENST00000510289, | ENST00000324989, ENST00000397890, ENST00000511535, ENST00000512574, | |
| Fusion gene scores | * DoF score | 7 X 7 X 5=245 | 6 X 6 X 4=144 |
| # samples | 7 | 6 | |
| ** MAII score | log2(7/245*10)=-1.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(6/144*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: ATP8A1 [Title/Abstract] AND CRMP1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Tgene | CRMP1 | GO:1904530 | negative regulation of actin filament binding | 25358863 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | OV | TCGA-25-1324-01A | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000381668 | ENST00000324989 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| In-frame | ENST00000381668 | ENST00000397890 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| 5CDS-5UTR | ENST00000381668 | ENST00000511535 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| 5CDS-5UTR | ENST00000381668 | ENST00000512574 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| In-frame | ENST00000264449 | ENST00000324989 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| In-frame | ENST00000264449 | ENST00000397890 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| 5CDS-5UTR | ENST00000264449 | ENST00000511535 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| 5CDS-5UTR | ENST00000264449 | ENST00000512574 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| intron-3CDS | ENST00000510289 | ENST00000324989 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| intron-3CDS | ENST00000510289 | ENST00000397890 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| intron-5UTR | ENST00000510289 | ENST00000511535 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
| intron-5UTR | ENST00000510289 | ENST00000512574 | ATP8A1 | chr4 | 42626553 | - | CRMP1 | chr4 | 5844888 | - |
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FusionProtFeatures for ATP8A1_CRMP1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| ATP8A1 | CRMP1 |
| Catalytic component of a P4-ATPase flippase complexwhich catalyzes the hydrolysis of ATP coupled to the transport ofaminophospholipids from the outer to the inner leaflet of variousmembranes and ensures the maintenance of asymmetric distributionof phospholipids. Phospholipid translocation seems also to beimplicated in vesicle formation and in uptake of lipid signalingmolecules. In vitro, its ATPase activity is selectively andstereospecifically stimulated by phosphatidylserine (PS). Theflippase complex ATP8A1:TMEM30A seems to play a role in regulationof cell migration probably involving flippase-mediatedtranslocation of phosphatidylethanolamine (PE) at the plasmamembrane. Acts as aminophospholipid translocase at the plasmamembrane in neuronal cells. | Necessary for signaling by class 3 semaphorins andsubsequent remodeling of the cytoskeleton. Plays a role in axonguidance, invasive growth and cell migration. May participate incytokinesis. {ECO:0000269|PubMed:11562390,ECO:0000269|PubMed:19799413}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 1_65 | 121 | 1150 | Topological domain | Cytoplasmic |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 87_92 | 121 | 1150 | Topological domain | Exoplasmic loop |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 1_65 | 121 | 1165 | Topological domain | Cytoplasmic |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 87_92 | 121 | 1165 | Topological domain | Exoplasmic loop |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 66_86 | 121 | 1150 | Transmembrane | Helical |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 93_115 | 121 | 1150 | Transmembrane | Helical |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 66_86 | 121 | 1165 | Transmembrane | Helical |
| Hgene | ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 93_115 | 121 | 1165 | Transmembrane | Helical |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 1095_1102 | 121 | 1150 | Nucleotide binding | ATP |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 741_748 | 121 | 1150 | Nucleotide binding | ATP |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 1095_1102 | 121 | 1165 | Nucleotide binding | ATP |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 741_748 | 121 | 1165 | Nucleotide binding | ATP |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 1000_1005 | 121 | 1150 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 1027_1044 | 121 | 1150 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 1071_1164 | 121 | 1150 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 116_297 | 121 | 1150 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 320_344 | 121 | 1150 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 367_857 | 121 | 1150 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 879_890 | 121 | 1150 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 911_940 | 121 | 1150 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 963_976 | 121 | 1150 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 1000_1005 | 121 | 1165 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 1027_1044 | 121 | 1165 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 1071_1164 | 121 | 1165 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 116_297 | 121 | 1165 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 320_344 | 121 | 1165 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 367_857 | 121 | 1165 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 879_890 | 121 | 1165 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 911_940 | 121 | 1165 | Topological domain | Cytoplasmic |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 963_976 | 121 | 1165 | Topological domain | Exoplasmic loop |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 1006_1026 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 1045_1070 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 298_319 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 345_366 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 858_878 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 891_910 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 941_962 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000264449 | - | 4 | 36 | 977_999 | 121 | 1150 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 1006_1026 | 121 | 1165 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 1045_1070 | 121 | 1165 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 298_319 | 121 | 1165 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 345_366 | 121 | 1165 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 858_878 | 121 | 1165 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 891_910 | 121 | 1165 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 941_962 | 121 | 1165 | Transmembrane | Helical |
| Hgene | >ATP8A1 | chr4:42626553 | chr4:5844888 | ENST00000381668 | - | 4 | 37 | 977_999 | 121 | 1165 | Transmembrane | Helical |
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FusionGeneSequence for ATP8A1_CRMP1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_ATP8A1_ENST00000381668_chr4_42626553_-_CRMP1_ENST00000324989_chr4_5844888_-_487aa MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ >In-frame_ATP8A1_ENST00000381668_chr4_42626553_-_CRMP1_ENST00000397890_chr4_5844888_-_487aa MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ >In-frame_ATP8A1_ENST00000264449_chr4_42626553_-_CRMP1_ENST00000324989_chr4_5844888_-_487aa MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ >In-frame_ATP8A1_ENST00000264449_chr4_42626553_-_CRMP1_ENST00000397890_chr4_5844888_-_487aa MPTMRRTVSEIRSRAEGYEKTDDVSEKTSLADQEEVRTIFINQPQLTKFCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQI PDVSPTGRYTTLVPLLFILAVAAIKEIIEDIEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIAL ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVN GIEERMTVVWDKAVATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPLVV ISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGPVYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQ |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_ATP8A1_ENST00000381668_chr4_42626553_-_CRMP1_ENST00000324989_chr4_5844888_-_1461nt ATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTG GCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAAC ATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATA CCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGAT ATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTG TTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTG GCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCC AAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTG CAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAAC GGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACC AATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAG TTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTC ATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAG CACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTA CCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAG TCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCC >In-frame_ATP8A1_ENST00000381668_chr4_42626553_-_CRMP1_ENST00000397890_chr4_5844888_-_1461nt ATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTG GCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAAC ATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATA CCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGAT ATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTG TTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTG GCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCC AAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTG CAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAAC GGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACC AATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAG TTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTC ATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAG CACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTA CCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAG TCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCC >In-frame_ATP8A1_ENST00000264449_chr4_42626553_-_CRMP1_ENST00000324989_chr4_5844888_-_1461nt ATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTG GCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAAC ATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATA CCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGAT ATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTG TTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTG GCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCC AAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTG CAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAAC GGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACC AATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAG TTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTC ATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAG CACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTA CCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAG TCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCC >In-frame_ATP8A1_ENST00000264449_chr4_42626553_-_CRMP1_ENST00000397890_chr4_5844888_-_1461nt ATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTG GCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAAC ATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATA CCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGAT ATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTG TTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTG GCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCC AAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTG CAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAAC GGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACC AATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAG TTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTC ATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAG CACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTA CCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAG TCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_ATP8A1_ENST00000381668_chr4_42626553_-_CRMP1_ENST00000324989_chr4_5844888_-_2689nt AAGAGCTCGCCCAGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGG CGGCAGCTCTGCCCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACG CCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTC GCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCA GCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTT CAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGT TCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGG TCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCC TGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCAT TGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCC GGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGC CCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGC GGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGG GCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGT GGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACAT CAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTT TGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGC CAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAA CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGG AGCTAGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGG AGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCAC AGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGT CCCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGT TACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA GGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACC TGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGG TCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCAC ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGA GGCAGTTGACGGGGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTG >In-frame_ATP8A1_ENST00000381668_chr4_42626553_-_CRMP1_ENST00000397890_chr4_5844888_-_2670nt AAGAGCTCGCCCAGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGG CGGCAGCTCTGCCCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACG CCGTGACAGGTGCAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTC GCGCGCCGAAGGTTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCA GCCCCAGCTGACAAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTT CAGAAGAGCTGCTAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGT TCCTCTCTTATTTATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGG TCCCGAGGGCCATGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCC TGTGTACATCACCAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCAT TGCCGCCAGCCTGGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCC GGACCCTACCACGCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGC CCAGAAGGCGGTGGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGC GGTGGCTACTGGCAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGG GCGGATTGCCGTGGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGT GGAGTACAACATCTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACAT CAACGTCAACAAGGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTT TGGATTGCAAGGGGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGC CAAATCTTCGCCTTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAA CAATCCCAGGCGCACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGG AGCTAGCCTGAAGGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGG AGGGGGAAGTCGAAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCAC AGTTGTGTTCATGCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGT CCCTTCCACTTCTAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGT TACTAAATTACGTATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGA GGGGCAGTCCCAAAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACC TGTGAGATCCGTGAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGG TCTCCGTGGCACTTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCAC ACTCAGAAAGAGGTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGA GGCAGTTGACGGGGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTG >In-frame_ATP8A1_ENST00000264449_chr4_42626553_-_CRMP1_ENST00000324989_chr4_5844888_-_2677nt AGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGGCGGCAGCTCTGC CCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTG CAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGG TTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC AAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGC TAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATT TATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCA TGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCAC CAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCT GGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCAC GCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGT GGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG CAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGT GGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACAT CTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAA GGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGG GGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCC TTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCG CACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGGAGCTAGCCTGAA GGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGGAGGGGGAAGTCG AAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCACAGTTGTGTTCAT GCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGTCCCTTCCACTTC TAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACG TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCA AAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGT GAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGGTCTCCGTGGCAC TTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCACACTCAGAAAGAG GTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGACGG GGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTGTGGCTCTTATTT >In-frame_ATP8A1_ENST00000264449_chr4_42626553_-_CRMP1_ENST00000397890_chr4_5844888_-_2658nt AGCTCTGCGGGCGCCGCCACCTTCGCCGCCACCGCTGCCTTTCTCCTCCTCCTGTCGGCGTGCGGGGGCCGCGCCCGGCGGCAGCTCTGC CCTAGGTGGGCGGCGGCGCGGCCCAGGCTGCAGCTGAGCGCTCTGCGCGGCGCAGCCGGGTCTCCCGCGTGTACCACGCCGTGACAGGTG CAGAGTCCGGGCTGAGGACCCACCTGCAGCCGCCGCCGCGATGCCCACCATGCGGAGGACCGTGTCGGAGATCCGCTCGCGCGCCGAAGG TTATGAGAAGACAGATGATGTTTCAGAGAAGACCTCACTGGCTGACCAGGAGGAAGTAAGGACTATTTTCATCAACCAGCCCCAGCTGAC AAAATTCTGCAATAACCATGTCAGCACTGCAAAATACAACATAATCACATTCCTTCCAAGATTTCTCTACTCTCAGTTCAGAAGAGCTGC TAATTCATTTTTTCTCTTTATTGCACTGCTGCAGCAAATACCTGATGTGTCACCAACAGGTCGTTATACAACACTGGTTCCTCTCTTATT TATTTTAGCTGTGGCAGCTATCAAAGAGATAATAGAAGATATTGAACAAAAGCGGATCCTGGAGATGGGCATCACGGGTCCCGAGGGCCA TGCCCTGAGCAGACCTGAAGAGCTGGAGGCCGAGGCGGTGTTCCGGGCCATCACCATTGCGGGCCGGATCAACTGCCCTGTGTACATCAC CAAGGTCATGAGCAAGAGTGCAGCCGACATCATCGCTCTGGCCAGGAAGAAAGGGCCCCTAGTTTTTGGAGAGCCCATTGCCGCCAGCCT GGGGACCGATGGCACCCATTACTGGAGCAAGAACTGGGCCAAGGCTGCGGCGTTCGTGACTTCCCCTCCCCTGAGCCCGGACCCTACCAC GCCCGACTACTTGACCTCCCTACTGGCCTGTGGGGACTTGCAGGTCACAGGCAGCGGCCACTGTCCCTACAGCACTGCCCAGAAGGCGGT GGGCAAGGACAACTTTACCCTGATCCCCGAGGGTGTCAACGGGATAGAGGAGCGGATGACGGTCGTCTGGGACAAGGCGGTGGCTACTGG CAAAATGGATGAGAACCAGTTTGTCGCTGTCACCAGCACCAATGCAGCCAAGATCTTTAACCTGTACCCAAGGAAAGGGCGGATTGCCGT GGGCTCGGATGCCGACGTGGTCATCTGGGACCCCGACAAGTTGAAGACCATAACAGCCAAAAGTCACAAGTCGGCGGTGGAGTACAACAT CTTCGAGGGTATGGAGTGCCACGGCTCCCCACTAGTGGTCATCAGCCAGGGCAAGATCGTCTTTGAAGACGGAAACATCAACGTCAACAA GGGCATGGGCCGCTTCATTCCGCGGAAGGCGTTCCCGGAGCACCTGTACCAGCGCGTCAAAATCAGGAATAAGGTTTTTGGATTGCAAGG GGTTTCCAGGGGCATGTATGACGGTCCTGTGTACGAGGTACCAGCTACACCCAAATATGCAACTCCCGCTCCTTCAGCCAAATCTTCGCC TTCTAAACACCAGCCCCCACCCATCAGAAACCTCCACCAGTCCAACTTCAGCTTATCAGGTGCCCAGATAGATGACAACAATCCCAGGCG CACCGGCCACCGCATCGTGGCGCCCCCTGGTGGCCGCTCCAACATCACCAGCCTCGGTTGAACGTGGATGCGCGGAGGAGCTAGCCTGAA GGATTCTGGGAATCATGTCCATCCCTTTTCCTGTCAGTGTTTTTGAAACCCACAGTTTTAGTTGGTGCTGATGGAGGGAGGGGGAAGTCG AAGGATGCTCTTTCCCTTTTCTGTTTAGGAAGAAGTGGTACTAGTGTGGTGTGTTTGCTTGGAAATTCCTTGCCCCACAGTTGTGTTCAT GCTGAATCCACCTCGGAGCATGGTGTTTTCATTCCCCCTTCCTAGTGAACCACAGGTTTTAGCATTGTCTTGTTCTGTCCCTTCCACTTC TAACTCCACTGGCTCCATGATTCTCTGAGTGGTGGTTCCTTTGCACCCTGTAGATGTTCTAGGATAGTTGATGCATGTTACTAAATTACG TATGCAAGTCTGTGAGTGCGTCTGAGGGGACATCGCCAAGGACTGACTGAGACACGATGCCGAGACCTCAAGCCCTGAGGGGCAGTCCCA AAACCCTTACAGTGAAGATGTTTACTCATTGCCCCCACCTCTGGTCCACACTAGAAAGAAGCTCGCCCCACCTCCACCTGTGAGATCCGT GAATTCTCGGAATGGCAGGGGAAGCCTTGCACTAGGTTGCAGAGAAGCATCCTCCACATCCTGTGTCAGAAACCCTGGTCTCCGTGGCAC TTGTAACTCACCGTGCTGTCTTCTGGTCTGTGTGTGTTCTTCAAGCCAGCTCTAGGCTTCAGGCCGAGCCAGGTTCACACTCAGAAAGAG GTCTCCCCATCCCCATTCGGGGCTGACGATGGGGGGCTGATGGCTGCCCCTGCGTGGCCTGAGTCCTGGTCCCTCTGAGGCAGTTGACGG GGCAGTCAGATTTTTAAAGTTTTGTACAAAGTTTTCCTTTGTAATCACTCCCATTTTTACTTAACAACCAACTTGTTGTGGCTCTTATTT |
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FusionGenePPI for ATP8A1_CRMP1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| ATP8A1 | TMEM30A, SLC17A2 | CRMP1 | KLHL20, CDK5RAP3, NVL, PPP1R8, MOB4, RTN4, EIF2S2, FXR1, HMGB1, PMF1, TRIP13, AGR2, ALDH2, EPN1, FTH1, FUBP1, HNRNPH1, HNRNPUL1, LRRC1, MRPS12, NDUFV2, PFN1, SEPHS1, SNRPG, TFG, ARL15, AXIN1, BTBD2, CCL18, CCT7, CDK5RAP2, NAT9, EEF1D, HSPE1, CCDC106, LSM2, RGL2, SAT1, TK1, FAS, UBE2B, HNRNPH3, PAFAH1B3, PSMD11, RPA2, SERPINB9, ZNF24, DPYSL2, RHOA, HGS, CACNA1A, MAPK8IP2, YAE1D1, BID, RPS6KA5, SRC, SPRY2, UBE2A, DNAJB11, VCP, DUSP4, RGS2, VIM, ANXA7, TSC22D1, AMFR, ZAK, HTT, ATP6V1B2, CORO1B, DNAJB4, CUL1, HSPA4, JMJD6, OTUD6B, PARVA, SEC24C, SWAP70, CRMP1, EXOSC8, GOLGA2, DPYSL3, AP3M1, PPT1, ARMC1, HAX1, NUFIP1, RRP7A, CDCA8, DGUOK, DNAAF2, NTRK1, PITHD1, ARFGAP1, UBA5 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ATP8A1_CRMP1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ATP8A1_CRMP1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | CRMP1 | C0036341 | Schizophrenia | 1 | PSYGENET |
| Tgene | CRMP1 | C3178803 | Social Anhedonia | 1 | PSYGENET |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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